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ONTOLOGY REPORT - ANNOTATIONS


Term:early endosome
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Accession:GO:0005769 term browser browse the term
Definition:A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
Synonyms:xref: NIF_Subcellular:nlx_subcell_20090701


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early endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCB9 ATP binding cassette subfamily B member 9 JBrowse link 12 120,523,592 120,573,322 RGD:9068941
G ADRB1 adrenoceptor beta 1 JBrowse link 10 110,642,491 110,646,595 RGD:9068941
G ALS2 alsin Rho guanine nucleotide exchange factor ALS2 JBrowse link 2B 88,954,167 89,034,764 RGD:9068941
G ANGPTL3 angiopoietin like 3 JBrowse link 1 61,855,870 61,863,476 RGD:9068941
G ANKFY1 ankyrin repeat and FYVE domain containing 1 JBrowse link 17 4,217,880 4,316,017 RGD:9068941
G ANKRD13B ankyrin repeat domain 13B JBrowse link 17 27,159,796 27,181,528 RGD:9068941
G ANKRD27 ankyrin repeat domain 27 JBrowse link 19 29,516,853 29,594,519 RGD:9068941
G ANXA2 annexin A2 JBrowse link 15 39,322,303 39,371,565 RGD:9068941
G AP4M1 adaptor related protein complex 4 subunit mu 1 JBrowse link 7 92,137,085 92,142,756 RGD:9068941
G APH1A aph-1 homolog A, gamma-secretase subunit JBrowse link 1 125,610,649 125,614,261 RGD:9068941
G APOE apolipoprotein E JBrowse link 19 41,853,669 41,857,252 RGD:9068941
G APP amyloid beta precursor protein JBrowse link 21 12,324,455 12,608,594 RGD:9068941
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 JBrowse link 3 57,161,299 57,206,672 RGD:9068941
G AQP2 aquaporin 2 JBrowse link 12 38,796,300 38,804,559 RGD:9068941
G ARF6 ADP ribosylation factor 6 JBrowse link 14 30,482,191 30,486,741 RGD:9068941
G ASAH1 N-acylsphingosine amidohydrolase 1 JBrowse link 8 17,272,632 17,300,902 RGD:9068941
G ATP6V0D1 ATPase H+ transporting V0 subunit d1 JBrowse link 16 47,783,327 47,826,138 RGD:9068941
G ATP6V0D2 ATPase H+ transporting V0 subunit d2 JBrowse link 8 82,800,353 82,855,741 RGD:9068941
G ATP9A ATPase phospholipid transporting 9A (putative) JBrowse link 20 47,944,444 48,116,500 RGD:9068941
G BACE1 beta-secretase 1 JBrowse link 11 112,120,950 112,151,505 RGD:9068941
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 JBrowse link 12 33,191,882 33,195,566 RGD:9068941
G CACNG7 calcium voltage-gated channel auxiliary subunit gamma 7 JBrowse link 19 50,849,785 50,880,904 RGD:9068941
G CD1D CD1d molecule JBrowse link 1 133,549,258 133,557,752 RGD:9068941
G CD22 CD22 molecule JBrowse link 19 32,265,278 32,294,122 RGD:9068941
G CFTR CF transmembrane conductance regulator JBrowse link 7 109,449,847 109,633,023 RGD:9068941
G CHMP1A charged multivesicular body protein 1A JBrowse link 16 70,398,021 70,411,383 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 4 161,838,061 161,943,072 RGD:9068941
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin RGD:9068941
G CLN6 CLN6 transmembrane ER protein JBrowse link 15 47,156,583 47,215,805 RGD:9068941
G CLTCL1 clathrin heavy chain like 1 JBrowse link 22 1,934,948 2,050,159 RGD:9068941
G CNTNAP2 contactin associated protein 2 JBrowse link 7 137,858,607 140,150,820 RGD:9068941
G COMMD1 copper metabolism domain containing 1 JBrowse link 2A 61,970,830 62,216,677 RGD:9068941
G CORO1A coronin 1A RGD:9068941
G CTNS cystinosin, lysosomal cystine transporter JBrowse link 17 3,686,903 3,711,857 RGD:9068941
G CXCR4 C-X-C motif chemokine receptor 4 JBrowse link 2B 23,744,271 23,748,106 RGD:9068941
G DERL1 derlin 1 JBrowse link 8 119,707,397 119,736,502 RGD:9068941
G DERL2 derlin 2 JBrowse link 17 5,519,183 5,534,145 RGD:9068941
G DNER delta/notch like EGF repeat containing JBrowse link 2B 116,604,193 116,963,026 RGD:9068941
G DTX3L deltex E3 ubiquitin ligase 3L JBrowse link 3 119,654,019 119,664,918 RGD:9068941
G DYSF dysferlin JBrowse link 2A 71,495,573 71,730,073 RGD:9068941
G ECE1 endothelin converting enzyme 1 JBrowse link 1 20,166,019 20,290,803 RGD:9068941
G ECPAS Ecm29 proteasome adaptor and scaffold JBrowse link 9 82,499,075 82,623,007 RGD:9068941
G EEA1 early endosome antigen 1 JBrowse link 12 90,299,582 90,457,109 RGD:9068941
G EHD1 EH domain containing 1 JBrowse link 11 60,208,840 60,236,513 RGD:9068941
G ENTR1 endosome associated trafficking regulator 1 JBrowse link 9 107,474,676 107,483,625 RGD:9068941
G EPHA3 EPH receptor A3 JBrowse link 3 89,261,166 89,629,010 RGD:9068941
G EPS15 epidermal growth factor receptor pathway substrate 15 JBrowse link 1 50,598,692 50,763,585 RGD:9068941
G EQTN equatorin JBrowse link 9 27,109,424 27,144,789 RGD:9068941
G F2R coagulation factor II thrombin receptor JBrowse link 5 38,565,957 38,585,725 RGD:9068941
G F2RL1 F2R like trypsin receptor 1 JBrowse link 5 38,462,521 38,478,882 RGD:9068941
G F8A1 coagulation factor VIII associated 1 JBrowse link X 144,366,123 144,367,842 RGD:9068941
G F8A2 coagulation factor VIII associated 2 JBrowse link X 144,851,466 144,853,185 RGD:9068941
G FGD2 FYVE, RhoGEF and PH domain containing 2 JBrowse link 6 36,566,942 36,591,044 RGD:9068941
G FLOT1 flotillin 1 JBrowse link 6 30,472,839 30,487,809 RGD:9068941
G FZD5 frizzled class receptor 5 JBrowse link 2B 95,003,246 95,010,577 RGD:9068941
G GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 JBrowse link 22 18,526,456 18,551,640 RGD:9068941
G GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 JBrowse link 17 69,185,045 69,208,766 RGD:9068941
G GJA1 gap junction protein alpha 1 JBrowse link 6 119,213,513 119,227,617 RGD:9068941
G GPR107 G protein-coupled receptor 107 JBrowse link 9 101,181,461 101,268,679 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 148,879,996 149,206,914 RGD:9068941
G GZMB granzyme B JBrowse link 14 5,399,888 5,403,200 RGD:9068941
G HAVCR2 hepatitis A virus cellular receptor 2 JBrowse link 5 152,486,125 152,514,004 RGD:9068941
G HFE homeostatic iron regulator JBrowse link 6 25,921,663 25,930,852 RGD:9068941
G HGS hepatocyte growth factor-regulated tyrosine kinase substrate JBrowse link 17 76,143,212 76,161,469 RGD:9068941
G HSPD1 heat shock protein family D (Hsp60) member 1 JBrowse link 2B 84,729,615 84,743,352 RGD:9068941
G HTT huntingtin JBrowse link 4 3,215,081 3,388,587 RGD:9068941
G HYAL3 hyaluronidase 3 JBrowse link 3 50,221,428 50,228,062 RGD:9068941
G IGF2R insulin like growth factor 2 receptor JBrowse link 6 157,852,565 157,990,049 RGD:9068941
G INPP5F inositol polyphosphate-5-phosphatase F JBrowse link 10 116,295,802 116,396,764 RGD:9068941
G ITCH itchy E3 ubiquitin protein ligase JBrowse link 20 30,690,172 30,840,504 RGD:9068941
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 JBrowse link 11 2,469,750 2,874,467 RGD:9068941
G KDR kinase insert domain receptor JBrowse link 4 68,813,894 68,861,018 RGD:9068941
G KIAA0319 KIAA0319 ortholog JBrowse link 6 24,377,666 24,483,388 RGD:9068941
G KIF16B kinesin family member 16B JBrowse link 20 16,229,429 16,532,735 RGD:9068941
G LAMP3 lysosomal associated membrane protein 3 JBrowse link 3 180,152,363 180,193,223 RGD:9068941
G LAPTM4B lysosomal protein transmembrane 4 beta JBrowse link 8 94,414,275 94,491,483 RGD:9068941
G LDLR low density lipoprotein receptor JBrowse link 19 10,640,225 10,683,728 RGD:9068941
G LDLRAP1 low density lipoprotein receptor adaptor protein 1 JBrowse link 1 24,809,535 24,852,394 RGD:9068941
G LIPC lipase C, hepatic type JBrowse link 15 37,363,507 37,537,723 RGD:9068941
G LIPG lipase G, endothelial type JBrowse link 18 42,942,132 42,972,112 RGD:9068941
G LMTK2 lemur tyrosine kinase 2 JBrowse link 7 6,312,634 6,415,332 RGD:9068941
G LOC100967334 G-protein coupled estrogen receptor 1 JBrowse link 7 1,245,873 1,251,915 RGD:9068941
G LOC100970314 charged multivesicular body protein 3 JBrowse link 2A 86,559,695 86,619,615 RGD:9068941
G LOC100972994 HLA class II histocompatibility antigen, DQ beta 1 chain JBrowse link 6 32,237,395 32,244,201 RGD:9068941
G LOC100993573 rab5 GDP/GTP exchange factor JBrowse link 7 59,268,053 59,344,555 RGD:9068941
G LOC100995326 serotransferrin JBrowse link 3 130,799,063 130,830,227 RGD:9068941
G LRP1 LDL receptor related protein 1 JBrowse link 12 31,713,938 31,799,287 RGD:9068941
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,121,411 12,288,590 RGD:9068941
G MGRN1 mahogunin ring finger 1 JBrowse link 16 3,550,352 3,615,693 RGD:9068941
G MIB2 mindbomb E3 ubiquitin protein ligase 2 JBrowse link 1 379,326 395,041 RGD:9068941
G MICALL1 MICAL like 1 JBrowse link 22 18,821,562 18,857,261 RGD:9068941
G MLC1 modulator of VRAC current 1 JBrowse link 22 30,287,928 30,316,094 RGD:9068941
G MME membrane metalloendopeptidase JBrowse link 3 152,085,694 152,240,148 RGD:9068941
G MMGT1 membrane magnesium transporter 1 JBrowse link X 125,086,169 125,098,878 RGD:9068941
G MVB12B multivesicular body subunit 12B JBrowse link 9 97,444,439 97,624,085 RGD:9068941
G MYO1B myosin IB JBrowse link 2B 78,549,494 78,728,819 RGD:9068941
G MYO5A myosin VA JBrowse link 15 31,246,192 31,470,040 RGD:9068941
G NAE1 NEDD8 activating enzyme E1 subunit 1 JBrowse link 16 47,119,548 47,147,679 RGD:9068941
G NCSTN nicastrin JBrowse link 1 135,697,592 135,713,293 RGD:9068941
G NEURL1B neuralized E3 ubiquitin protein ligase 1B JBrowse link 5 167,994,646 168,045,364 RGD:9068941
G NF2 neurofibromin 2 JBrowse link 22 10,648,022 10,738,167 RGD:9068941
G NIPA1 NIPA magnesium transporter 1 RGD:9068941
G NIPA2 NIPA magnesium transporter 2 RGD:9068941
G NOX1 NADPH oxidase 1 JBrowse link X 90,046,023 90,076,968 RGD:9068941
G NRP1 neuropilin 1 JBrowse link 10 33,298,918 33,456,466 RGD:9068941
G NSG1 neuronal vesicle trafficking associated 1 RGD:9068941
G NTRK2 neurotrophic receptor tyrosine kinase 2 JBrowse link 9 39,663,986 40,208,770 RGD:9068941
G NUCB1 nucleobindin 1 JBrowse link 19 45,900,098 45,923,056 RGD:9068941
G NUMB NUMB endocytic adaptor protein JBrowse link 14 53,854,280 54,046,410 RGD:9068941
G OCRL OCRL inositol polyphosphate-5-phosphatase JBrowse link X 118,670,612 118,721,108 RGD:9068941
G P2RY2 purinergic receptor P2Y2 JBrowse link 11 68,294,366 68,319,118 RGD:9068941
G PARM1 prostate androgen-regulated mucin-like protein 1 JBrowse link 4 49,153,654 49,270,384 RGD:9068941
G PCSK9 proprotein convertase subtilisin/kexin type 9 JBrowse link 1 54,323,036 54,355,397 RGD:9068941
G PHB prohibitin JBrowse link 17 8,189,555 8,200,491 RGD:9068941
G PHETA1 PH domain containing endocytic trafficking adaptor 1 JBrowse link 12 108,928,091 108,936,858 RGD:9068941
G PHETA2 PH domain containing endocytic trafficking adaptor 2 JBrowse link 22 22,964,383 22,972,840 RGD:9068941
G PICALM phosphatidylinositol binding clathrin assembly protein JBrowse link 11 81,011,324 81,122,352 RGD:9068941
G PLD4 phospholipase D family member 4 JBrowse link 14 85,574,724 85,587,176 RGD:9068941
G PPP1R21 protein phosphatase 1 regulatory subunit 21 JBrowse link 2A 48,568,114 48,642,401 RGD:9068941
G PRDX3 peroxiredoxin 3 JBrowse link 10 115,738,346 115,749,482 RGD:9068941
G PSEN1 presenilin 1 JBrowse link 14 53,718,299 53,802,684 RGD:9068941
G PSEN2 presenilin 2 JBrowse link 1 202,328,987 202,354,440 RGD:9068941
G PTPN1 protein tyrosine phosphatase non-receptor type 1 JBrowse link 20 46,854,918 46,929,509 RGD:9068941
G PTPN23 protein tyrosine phosphatase non-receptor type 23 JBrowse link 3 47,280,706 47,314,268 RGD:9068941
G RAB11FIP5 RAB11 family interacting protein 5 JBrowse link 2A 73,126,262 73,165,892 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 9 92,305,656 92,329,419 RGD:9068941
G RAB17 RAB17, member RAS oncogene family JBrowse link 2B 124,802,789 124,820,775 RGD:9068941
G RAB1A RAB1A, member RAS oncogene family JBrowse link 2A 65,149,922 65,193,305 RGD:9068941
G RAB22A RAB22A, member RAS oncogene family JBrowse link 20 54,655,014 54,714,349 RGD:9068941
G RAB29 RAB29, member RAS oncogene family JBrowse link 1 181,377,018 181,384,496 RGD:9068941
G RAB31 RAB31, member RAS oncogene family JBrowse link 18 4,424,677 4,578,263 RGD:9068941
G RAB32 RAB32, member RAS oncogene family JBrowse link 6 144,339,323 144,354,885 RGD:9068941
G RAB34 RAB34, member RAS oncogene family JBrowse link 17 28,057,077 28,061,234 RGD:9068941
G RAB38 RAB38, member RAS oncogene family JBrowse link 11 83,121,858 83,183,698 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941
G RABGAP1L RAB GTPase activating protein 1 like JBrowse link 1 149,676,356 150,506,884 RGD:9068941
G RAP1A RAP1A, member of RAS oncogene family JBrowse link 1 114,279,255 114,376,977 RGD:9068941
G RAP1GAP RAP1 GTPase activating protein JBrowse link 1 20,790,076 20,860,511 RGD:9068941
G RAPGEF1 Rap guanine nucleotide exchange factor 1 JBrowse link 9 102,698,970 102,861,482 RGD:9068941
G RET ret proto-oncogene JBrowse link 10 40,050,396 40,103,629 RGD:9068941
G RHOB ras homolog family member B JBrowse link 2A 20,433,576 20,435,986 RGD:9068941
G RIN3 Ras and Rab interactor 3 JBrowse link 14 73,148,000 73,322,798 RGD:9068941
G RND2 Rho family GTPase 2 JBrowse link 17 14,276,880 14,298,023 RGD:9068941
G RPS6KC1 ribosomal protein S6 kinase C1 JBrowse link 1 188,622,154 188,834,327 RGD:9068941
G RUBCN rubicon autophagy regulator JBrowse link 3 195,088,936 195,166,771 RGD:9068941
G RUSC1 RUN and SH3 domain containing 1 JBrowse link 1 130,665,390 130,675,635 RGD:9068941
G SAMD9L sterile alpha motif domain containing 9 like JBrowse link 7 85,086,661 85,104,983 RGD:9068941
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 9 17,386,298 17,605,722 RGD:9068941
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 JBrowse link 15 61,988,584 62,153,543 RGD:9068941
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 JBrowse link 1 119,224,304 119,267,986 RGD:9068941
G SIAH1 siah E3 ubiquitin protein ligase 1 JBrowse link 16 28,627,021 28,651,343 RGD:9068941
G SIAH2 siah E3 ubiquitin protein ligase 2 JBrowse link 3 147,759,375 147,781,639 RGD:9068941
G SIGLEC1 sialic acid binding Ig like lectin 1 JBrowse link 20 3,769,118 3,795,678 RGD:9068941
G SLC11A2 solute carrier family 11 member 2 JBrowse link 12 37,726,158 37,774,554 RGD:9068941
G SLC17A6 solute carrier family 17 member 6 JBrowse link 11 22,350,537 22,392,009 RGD:9068941
G SLC2A13 solute carrier family 2 member 13 JBrowse link 12 48,609,170 48,948,828 RGD:9068941
G SLC30A10 solute carrier family 30 member 10 JBrowse link 1 195,480,707 195,528,243 RGD:9068941
G SLC35D3 solute carrier family 35 member D3 JBrowse link 6 134,683,339 134,686,731 RGD:9068941
G SLC5A1 solute carrier family 5 member 1 JBrowse link 22 13,070,853 13,140,948 RGD:9068941
G SLC5A7 solute carrier family 5 member 7 JBrowse link 2A 93,917,086 93,944,308 RGD:9068941
G SLC9A6 solute carrier family 9 member A6 JBrowse link X 125,099,378 125,171,161 RGD:9068941
G SNX1 sorting nexin 1 JBrowse link 15 43,048,974 43,096,544 RGD:9068941
G SNX12 sorting nexin 12 JBrowse link X 60,327,484 60,336,682 RGD:9068941
G SNX13 sorting nexin 13 JBrowse link 7 18,444,092 18,593,950 RGD:9068941
G SNX16 sorting nexin 16 JBrowse link 8 78,324,407 78,367,143 RGD:9068941
G SNX17 sorting nexin 17 JBrowse link 2A 27,374,340 27,380,999 RGD:9068941
G SNX27 sorting nexin 27 JBrowse link 1 126,968,370 127,052,942 RGD:9068941
G SNX3 sorting nexin 3 JBrowse link 6 106,010,633 106,063,331 RGD:9068941
G SORL1 sortilin related receptor 1 JBrowse link 11 116,297,014 116,477,399 RGD:9068941
G SORT1 sortilin 1 JBrowse link 1 111,687,119 111,775,339 RGD:9068941
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 JBrowse link 15 71,082,491 71,158,038 RGD:9068941
G STEAP2 STEAP2 metalloreductase JBrowse link 7 82,220,814 82,246,718 RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G STX7 syntaxin 7 JBrowse link 6 130,232,041 130,289,326 RGD:9068941
G STX8 syntaxin 8 JBrowse link 17 42,076,600 42,403,334 RGD:9068941
G TBC1D16 TBC1 domain family member 16 JBrowse link 17 74,021,069 74,120,412 RGD:9068941
G TFRC transferrin receptor JBrowse link 3 193,384,817 193,417,532 RGD:9068941
G TGFBRAP1 transforming growth factor beta receptor associated protein 1 JBrowse link 2A 96,500,444 96,578,068 RGD:9068941
G TICAM2 toll like receptor adaptor molecule 2 JBrowse link 5 110,935,649 110,960,019 RGD:9068941
G TM9SF4 transmembrane 9 superfamily member 4 JBrowse link 20 28,403,014 28,458,679 RGD:9068941
G TMEM108 transmembrane protein 108 JBrowse link 3 130,105,824 130,468,122 RGD:9068941
G TMEM127 transmembrane protein 127 JBrowse link 2A 103,049,655 103,065,116 RGD:9068941
G TMEM230 transmembrane protein 230 JBrowse link 20 5,119,775 5,133,079 RGD:9068941
G TOM1 target of myb1 membrane trafficking protein JBrowse link 22 16,306,575 16,355,442 RGD:9068941
G TRAK1 trafficking kinesin protein 1 JBrowse link 3 41,920,678 42,135,881 RGD:9068941
G TRAK2 trafficking kinesin protein 2 JBrowse link 2B 88,630,665 88,705,709 RGD:9068941
G TRAPPC9 trafficking protein particle complex 9 JBrowse link 8 136,402,736 137,180,507 RGD:9068941
G TSG101 tumor susceptibility 101 JBrowse link 11 18,518,110 18,564,814 RGD:9068941
G UHRF1BP1L UHRF1 binding protein 1 like JBrowse link 12 97,617,019 97,723,669 RGD:9068941
G USP10 ubiquitin specific peptidase 10 JBrowse link 16 65,367,463 65,447,549 RGD:9068941
G USP8 ubiquitin specific peptidase 8 JBrowse link 15 29,374,945 29,451,235 RGD:9068941
G UTS2R urotensin 2 receptor JBrowse link 17 76,783,432 76,788,639 RGD:9068941
G UVRAG UV radiation resistance associated JBrowse link 11 70,870,341 71,197,559 RGD:9068941
G VCAM1 vascular cell adhesion molecule 1 JBrowse link 1 103,377,815 103,395,118 RGD:9068941
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog JBrowse link 14 57,982,041 58,013,037 RGD:9068941
G VPS11 VPS11 core subunit of CORVET and HOPS complexes JBrowse link 11 113,905,989 113,920,163 RGD:9068941
G VPS16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 20 2,931,553 2,956,604 RGD:9068941
G VPS18 VPS18 core subunit of CORVET and HOPS complexes JBrowse link 15 19,836,707 19,846,231 RGD:9068941
G VPS26A VPS26, retromer complex component A JBrowse link 10 65,591,415 65,639,894 RGD:9068941
G VPS26B VPS26, retromer complex component B JBrowse link 11 129,077,964 129,100,936 RGD:9068941
G VPS28 VPS28 subunit of ESCRT-I JBrowse link 8 141,189,967 141,195,482 RGD:9068941
G VPS33A VPS33A core subunit of CORVET and HOPS complexes JBrowse link 12 119,831,693 119,868,132 RGD:9068941
G VPS35 VPS35 retromer complex component JBrowse link 16 26,924,901 26,954,443 RGD:9068941
G VPS41 VPS41 subunit of HOPS complex JBrowse link 7 39,355,578 39,543,281 RGD:9068941
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 16 49,685,827 49,699,542 RGD:9068941
G VPS8 VPS8 subunit of CORVET complex JBrowse link 3 181,850,827 182,089,846 RGD:9068941
G WASF2 WASP family member 2 JBrowse link 1 26,665,853 26,750,618 RGD:9068941
G WASHC5 WASH complex subunit 5 JBrowse link 8 121,710,118 121,777,977 RGD:9068941
G WDFY1 WD repeat and FYVE domain containing 1 JBrowse link 2B 111,121,073 111,190,968 RGD:9068941
G WDFY2 WD repeat and FYVE domain containing 2 JBrowse link 13 32,714,088 32,896,885 RGD:9068941
G WLS Wnt ligand secretion mediator JBrowse link 1 67,336,009 67,470,265 RGD:9068941
G ZFYVE16 zinc finger FYVE-type containing 16 JBrowse link 5 34,837,410 34,910,416 RGD:9068941
cytoplasmic side of early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LITAF lipopolysaccharide induced TNF factor JBrowse link 16 10,488,738 10,527,843 RGD:9068941
G RAB21 RAB21, member RAS oncogene family JBrowse link 12 69,278,191 69,309,143 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941
early endosome lumen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDLIM4 PDZ and LIM domain 4 JBrowse link 5 127,680,339 127,696,172 RGD:9068941
G RAB32 RAB32, member RAS oncogene family JBrowse link 6 144,339,323 144,354,885 RGD:9068941
G RAB38 RAB38, member RAS oncogene family JBrowse link 11 83,121,858 83,183,698 RGD:9068941
early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANXA1 annexin A1 JBrowse link 9 51,647,404 51,665,990 RGD:9068941
G BAIAP3 BAI1 associated protein 3 RGD:9068941
G BOK BCL2 family apoptosis regulator BOK JBrowse link 2B 128,832,458 128,847,918 RGD:9068941
G CD274 CD274 molecule JBrowse link 9 5,269,270 5,289,629 RGD:9068941
G CLCN3 chloride voltage-gated channel 3 JBrowse link 4 161,838,061 161,943,072 RGD:9068941
G CLIP3 CAP-Gly domain containing linker protein 3 JBrowse link 19 32,932,915 32,951,047 RGD:9068941
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin RGD:9068941
G CMTM6 CKLF like MARVEL transmembrane domain containing 6 JBrowse link 3 32,399,143 32,420,753 RGD:9068941
G DAGLA diacylglycerol lipase alpha JBrowse link 11 56,979,558 57,046,589 RGD:9068941
G DNAJC13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 3 129,492,658 129,612,040 RGD:9068941
G EGFR epidermal growth factor receptor JBrowse link 7 55,614,042 55,807,285 RGD:9068941
G EHD1 EH domain containing 1 JBrowse link 11 60,208,840 60,236,513 RGD:9068941
G EPHA4 EPH receptor A4 JBrowse link 2B 108,664,475 108,818,802 RGD:9068941
G EPHB1 EPH receptor B1 JBrowse link 3 131,841,459 132,309,082 RGD:9068941
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 148,879,996 149,206,914 RGD:9068941
G KCNH1 potassium voltage-gated channel subfamily H member 1 JBrowse link 1 186,233,881 186,696,509 RGD:9068941
G LAMP5 lysosomal associated membrane protein family member 5 JBrowse link 20 9,487,971 9,503,912 RGD:9068941
G LDLRAD4 low density lipoprotein receptor class A domain containing 4 JBrowse link 18 669,862 1,110,558 RGD:9068941
G LLGL1 LLGL scribble cell polarity complex component 1 JBrowse link 17 32,770,511 32,789,756 RGD:9068941
G LOC100972084 major histocompatibility complex class I-related gene protein JBrowse link 1 156,510,588 156,538,447 RGD:9068941
G LOC100976603 olfactory receptor 51E2 JBrowse link 11 4,853,325 4,871,457 RGD:9068941
G MARCHF1 membrane associated ring-CH-type finger 1 JBrowse link 4 155,791,599 156,639,456 RGD:9068941
G NSG1 neuronal vesicle trafficking associated 1 RGD:9068941
G OSBPL6 oxysterol binding protein like 6 JBrowse link 2B 65,449,726 65,656,040 RGD:9068941
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 10 94,261,096 94,293,358 RGD:9068941
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 2B 95,505,376 95,597,792 RGD:9068941
G PLA2G4E phospholipase A2 group IVE JBrowse link 15 20,937,573 20,975,388 RGD:9068941
G PLD3 phospholipase D family member 3 JBrowse link 19 37,396,475 37,426,425 RGD:9068941
G PMEPA1 prostate transmembrane protein, androgen induced 1 JBrowse link 20 53,989,384 54,052,151 RGD:9068941
G RAC1 Rac family small GTPase 1 JBrowse link 7 7,039,379 7,068,866 RGD:9068941
G RCC2 regulator of chromosome condensation 2 JBrowse link 1 16,353,770 16,386,810 RGD:9068941
G SLC1A1 solute carrier family 1 member 1 JBrowse link 9 4,323,124 4,420,193 RGD:9068941
G SLC39A14 solute carrier family 39 member 14 JBrowse link 8 21,617,529 21,672,726 RGD:9068941
G SLC9A6 solute carrier family 9 member A6 JBrowse link X 125,099,378 125,171,161 RGD:9068941
G SNX1 sorting nexin 1 JBrowse link 15 43,048,974 43,096,544 RGD:9068941
G SNX19 sorting nexin 19 JBrowse link 11 125,691,537 125,732,206 RGD:9068941
G SNX20 sorting nexin 20 JBrowse link 16 30,928,545 30,944,509 RGD:9068941
G SNX21 sorting nexin family member 21 JBrowse link 20 42,173,092 42,181,890 RGD:9068941
G SNX3 sorting nexin 3 JBrowse link 6 106,010,633 106,063,331 RGD:9068941
G SNX4 sorting nexin 4 JBrowse link 3 122,578,527 122,652,007 RGD:9068941
G SNX5 sorting nexin 5 JBrowse link 20 17,901,450 17,928,664 RGD:9068941
G SNX6 sorting nexin 6 JBrowse link 14 15,319,526 15,388,326 RGD:9068941
G SNX8 sorting nexin 8 JBrowse link 7 2,521,267 2,579,535 RGD:9068941
G SORCS2 sortilin related VPS10 domain containing receptor 2 RGD:9068941
G SPHK1 sphingosine kinase 1 JBrowse link 17 70,331,370 70,336,043 RGD:9068941
G SYNDIG1 synapse differentiation inducing 1 JBrowse link 20 24,402,471 24,629,365 RGD:9068941
G TMEM163 transmembrane protein 163 JBrowse link 2B 25,138,333 25,393,295 RGD:9068941
G TMEM184A transmembrane protein 184A JBrowse link 7 1,793,830 1,803,709 RGD:9068941
G UBXN6 UBX domain protein 6 JBrowse link 19 3,463,259 3,475,428 RGD:9068941
G VPS16 VPS16 core subunit of CORVET and HOPS complexes JBrowse link 20 2,931,553 2,956,604 RGD:9068941
G VPS33B VPS33B late endosome and lysosome associated JBrowse link 15 69,691,717 69,715,617 RGD:9068941
G VTI1B vesicle transport through interaction with t-SNAREs 1B JBrowse link 14 48,227,203 48,254,990 RGD:9068941
G WDR81 WD repeat domain 81 JBrowse link 17 1,708,119 1,722,405 RGD:9068941
G WDR91 WD repeat domain 91 JBrowse link 7 127,150,041 127,176,376 RGD:9068941
G ZFYVE28 zinc finger FYVE-type containing 28 JBrowse link 4 2,412,659 2,564,741 RGD:9068941
G ZFYVE9 zinc finger FYVE-type containing 9 JBrowse link 1 51,395,692 51,604,190 RGD:9068941
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRIPAP1 GRIP1 associated protein 1 JBrowse link X 41,271,762 41,300,327 RGD:9068941
postsynaptic early endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100972387 DNA-directed RNA polymerases I, II, and III subunit RPABC2 JBrowse link 22 18,868,872 18,988,918 RGD:9068941
G RAB5A RAB5A, member RAS oncogene family JBrowse link 3 19,866,110 19,903,701 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12608
    cellular anatomical entity 12425
      endomembrane system 3035
        endosome 671
          early endosome 264
            early endosome lumen 3
            early endosome membrane + 60
            postsynaptic early endosome + 3
Path 2
Term Annotations click to browse term
  cellular_component 12608
    cellular anatomical entity 12425
      organelle 9687
        membrane-bounded organelle 8601
          vesicle 1579
            intracellular vesicle 1447
              cytoplasmic vesicle 1442
                endosome 671
                  early endosome 264
                    early endosome lumen 3
                    early endosome membrane + 60
                    postsynaptic early endosome + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.