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ONTOLOGY REPORT - ANNOTATIONS


Term:lysosome
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Accession:GO:0005764 term browser browse the term
Definition:A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
Synonyms:xref: NIF_Subcellular:sao585356902;   Wikipedia:Lysosome


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lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (PMID:11309290) UniProtKB PMID:11309290 NCBI chrNW_004936669:922,978...941,996 JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 ISO (MGI:3581349|PMID:15870284) BHF-UCL PMID:15870284 MGI:3581349 NCBI chrNW_004936541:8,467,035...8,549,893 JBrowse link
G Abcb9 ATP binding cassette subfamily B member 9 ISO (PMID:22641697) UniProtKB PMID:22641697 NCBI chrNW_004936558:1,689,832...1,718,306 JBrowse link
G Acp2 acid phosphatase 2, lysosomal ISO (PMID:3160696)
(MGI:2154041|PMID:11731469)
(MGI:1930064|PMID:11168643)
MGI
RGD
PMID:3160696 PMID:11168643 PMID:11687729 PMID:11731469 MGI:1930064 MGI:2154041 RGD:1600623 NCBI chrNW_004936562:1,952,581...1,960,327 JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO (MGI:1930064|PMID:11168643)
(MGI:2154041|PMID:11731469)
MGI PMID:11168643 PMID:11731469 MGI:1930064 MGI:2154041 NCBI chrNW_004936659:1,598,252...1,642,615 JBrowse link
G Aga aspartylglucosaminidase ISO (PMID:8776587)
(MGI:6155546|PMID:29514215)
UniProtKB
MGI
RGD
PMID:7673341 PMID:8776587 PMID:29514215 MGI:6155546 RGD:1598777 NCBI chrNW_004936516:7,850,995...7,861,883 JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO RGD PMID:9886486 RGD:1599068 NCBI chrNW_004936524:9,584,302...9,592,961 JBrowse link
G Ankrd27 ankyrin repeat domain 27 ISO (PMID:24856514) LIFEdb PMID:24856514 GO_REF:0000054 NCBI chrNW_004936570:3,044,565...3,097,692 JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 ISO (PMID:22022230) UniProtKB PMID:22022230 NCBI chrNW_004936495:1,862,790...1,900,955 JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 ISO (PMID:22022230) UniProtKB PMID:22022230 NCBI chrNW_004936485:14,880,338...14,884,383 JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:2493483 RGD:7495790 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G App amyloid beta precursor protein colocalizes_with ISO (PMID:21289173), (PMID:23152628) ARUK-UCL PMID:21289173 PMID:23152628 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:18843259 RGD:2313123 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Arsa arylsulfatase A ISO RGD PMID:15503159 RGD:1599222 NCBI chrNW_004936629:187,281...205,493 JBrowse link
G Arsb arylsulfatase B ISO RGD PMID:1686699 RGD:1599229 NCBI chrNW_004936549:6,654,259...6,827,647 JBrowse link
G Arsg arylsulfatase G ISO (PMID:18283100) UniProtKB PMID:18283100 NCBI chrNW_004936541:7,664,241...7,782,762 JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 ISO (PMID:12764132) UniProt PMID:12764132 NCBI chrNW_004936554:104,666...141,761 JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:10469394 RGD:4142786 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:16964263), (PMID:21542062), (PMID:24603074), (PMID:25392495) ParkinsonsUK-UCL PMID:16964263 PMID:21542062 PMID:24603074 PMID:25392495 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 ISO (PMID:29127204) UniProt PMID:29127204 NCBI chrNW_004936502:7,206,226...7,232,798 JBrowse link
G Atp6v0c ATPase H+ transporting V0 subunit c ISO RGD PMID:1400263 RGD:631903 NCBI chrNW_004936694:1,536,393...1,542,218 JBrowse link
G Bace1 beta-secretase 1 ISO (PMID:16033761), (PMID:23109336), (PMID:27084579), (PMID:27302062) UniProt PMID:16033761 PMID:23109336 PMID:27084579 PMID:27302062 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Bbc3 BCL2 binding component 3 colocalizes_with ISO (PMID:26212789) ParkinsonsUK-UCL PMID:26212789 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Bcl10 BCL10 immune signaling adaptor ISO (PMID:15082780) UniProtKB PMID:15082780 NCBI chrNW_004936608:434,740...442,162 JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit ISO (PMID:24549040), (PMID:27559131) UniProtKB PMID:24549040 PMID:27559131 NCBI chrNW_004936611:2,074,655...2,101,846 JBrowse link
G Calcrl calcitonin receptor like receptor ISO (PMID:10882736) UniProtKB PMID:10882736 NCBI chrNW_004936506:10,191,789...10,292,355 JBrowse link
G Capn1 calpain 1 ISO (MGI:5543358|PMID:22555453) MGI PMID:22555453 MGI:5543358 NCBI chrNW_004936599:4,178,963...4,201,037 JBrowse link
G Capn2 calpain 2 ISO (MGI:5543358|PMID:22555453) MGI PMID:22555453 MGI:5543358 NCBI chrNW_004936526:879,765...932,682 JBrowse link
G Cat catalase ISO RGD PMID:17576767 RGD:2292202 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Ccdc115 coiled-coil domain containing 115 ISO (MGI:3616929|PMID:16378758) MGI PMID:16378758 MGI:3616929 NCBI chrNW_004936469:41,083,713...41,087,106 JBrowse link
G Cckar cholecystokinin A receptor ISO RGD PMID:9169450 RGD:2313345 NCBI chrNW_004936477:3,306,898...3,314,659 JBrowse link
G Cd164 CD164 molecule ISO (PMID:11027692) UniProtKB
RGD
PMID:10620506 PMID:11027692 RGD:70675 NCBI chrNW_004936564:5,510,718...5,522,637 JBrowse link
G Cd34 CD34 molecule ISO PMID:18319274 UniProt PMID:18319274 RGD:8553277 NCBI chrNW_004936557:5,030,788...5,051,864 JBrowse link
G Cd63 CD63 molecule ISO (MGI:3042340|PMID:14668490), (MGI:5804716|PMID:27435297) RGD
MGI
PMID:1634775 PMID:14668490 PMID:27435297 MGI:3042340 MGI:5804716 RGD:61549 NCBI chrNW_004936646:196,002...199,177 JBrowse link
G Cd68 CD68 molecule ISO (MGI:5285055|PMID:21572087) ARUK-UCL PMID:21572087 MGI:5285055 NCBI chrNW_004936595:858,289...861,131 JBrowse link
G Cd74 CD74 molecule ISO (MGI:3033879|PMID:11854359), (MGI:3054306|PMID:15294975), (MGI:3691984|PMID:11483509) MGI PMID:11483509 PMID:11854359 PMID:15294975 MGI:3033879 MGI:3054306 MGI:3691984 NCBI chrNW_004936504:4,522,576...4,532,289 JBrowse link
G Chid1 chitinase domain containing 1 ISO (PMID:16357325) UniProtKB PMID:16357325 NCBI chrNW_004936888:619,579...648,650 JBrowse link
G Chmp2b charged multivesicular body protein 2B colocalizes_with ISO (PMID:16041373) UniProtKB PMID:16041373 NCBI chrNW_004936610:2,282,925...2,320,554 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:10332042), (PMID:10924275), (PMID:14699076), (PMID:15471887), (PMID:19941651)
(MGI:3527911|PMID:15588329), (MGI:3690270|PMID:16714284), (MGI:5795821|PMID:19941651), (MGI:6383759|PMID:11590129)
(PMID:14644441)
UniProt
MGI
PMID:10332042 PMID:10924275 PMID:11590129 PMID:14644441 PMID:14699076 PMID:15471887 PMID:15588329 PMID:16714284 PMID:19941651 MGI:3527911 MGI:3690270 MGI:5795821 MGI:6383759 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Cln5 CLN5 intracellular trafficking protein ISO (PMID:11971870), (PMID:19941651), (PMID:22431521)
(MGI:3046133|PMID:15207259), (MGI:5795821|PMID:19941651), (MGI:6155546|PMID:29514215)
UniProtKB
MGI
PMID:11971870 PMID:15207259 PMID:19941651 PMID:22431521 PMID:29514215 MGI:3046133 MGI:5795821 MGI:6155546 NCBI chrNW_004936511:4,283,016...4,291,968 JBrowse link
G Cltc clathrin heavy chain ISO HPA GO_REF:0000052 NCBI chrNW_004936490:3,659,682...3,726,222 JBrowse link
G Cpq carboxypeptidase Q ISO PMID:22127294
(MGI:6155546|PMID:29514215)
UniProt
MGI
PMID:22127294 PMID:29514215 MGI:6155546 RGD:8554022 NCBI chrNW_004936470:45,489,562...45,848,412 JBrowse link
G Cst7 cystatin F ISO (PMID:15752368), (PMID:18256700), (PMID:22365146)
(MGI:6294233|PMID:15212960)
ARUK-UCL PMID:15212960 PMID:15752368 PMID:18256700 PMID:22365146 MGI:6294233 NCBI chrNW_004936620:853,533...870,609 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (PMID:11855931), (PMID:12138135), (PMID:15128704), (PMID:18337546)
(MGI:2388548|PMID:12370309)
UniProtKB
MGI
PMID:11855931 PMID:12138135 PMID:12370309 PMID:15128704 PMID:18337546 MGI:2388548 NCBI chrNW_004936677:342,964...360,890 JBrowse link
G Ctsc cathepsin C ISO PMID:18307834 ParkinsonsUK-UCL
RGD
PMID:8215389 PMID:18307834 RGD:1599644 RGD:8661625 NCBI chrNW_004936736:1,201,343...1,240,311 JBrowse link
G Ctsd cathepsin D ISO (MGI:1271008|PMID:9645704), (MGI:1352198|PMID:10591619), (MGI:2661373|PMID:12676993), (MGI:2673081|PMID:12775715), (MGI:3057045|PMID:15452145), (MGI:3608104|PMID:16242638), (MGI:5701557|PMID:26370502), (MGI:86330|PMID:9034150)
(PMID:1692625), (PMID:1837142), (PMID:19723497), (PMID:2350688)
RGD
MGI
ARUK-UCL
PMID:1692625 PMID:1837142 PMID:2350688 PMID:8702598 PMID:9034150 PMID:9645704 PMID:10591619 PMID:11687729 PMID:12666874 PMID:12676993 PMID:12775715 PMID:15452145 PMID:16242638 PMID:19723497 PMID:26370502 MGI:1271008 MGI:1352198 MGI:2661373 MGI:2673081 MGI:3057045 MGI:3608104 MGI:5701557 MGI:86330 RGD:1299317 RGD:1600623 RGD:1625498 NCBI chrNW_004936816:680,798...690,959 JBrowse link
G Ctsh cathepsin H ISO (PMID:15196205), (PMID:16822283), (PMID:1837142) RGD
UniProtKB
PMID:1837142 PMID:2005374 PMID:15196205 PMID:16822283 RGD:5686400 NCBI chrNW_004936471:37,135,200...37,156,081 JBrowse link
G Ctsk cathepsin K ISO (MGI:2664014|PMID:12782676), (MGI:6155546|PMID:29514215)
(PMID:11082042), (PMID:22365146)
RGD
UniProt
PMID:11082042 PMID:12782676 PMID:14585819 PMID:22365146 PMID:29514215 MGI:2664014 MGI:6155546 RGD:1354673 NCBI chrNW_004936580:1,022,762...1,038,020 JBrowse link
G Ctsl cathepsin L ISO (MGI:2136433|PMID:11023992), (MGI:2664014|PMID:12782676), (MGI:3044037|PMID:15099520), (MGI:3691984|PMID:11483509)
(PMID:15196205), (PMID:1837142), (PMID:22365146), (PMID:28743268)
RGD
UniProt
PMID:1837142 PMID:8702598 PMID:11023992 PMID:11483509 PMID:11687729 PMID:11788364 PMID:12782676 PMID:15099520 PMID:15196205 PMID:22365146 PMID:28743268 MGI:2136433 MGI:2664014 MGI:3044037 MGI:3691984 RGD:1600623 RGD:1625498 RGD:631244 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Ctss cathepsin S ISO (PMID:15196205)
(MGI:3033879|PMID:11854359), (MGI:6155546|PMID:29514215)
UniProtKB
MGI
PMID:11854359 PMID:15196205 PMID:29514215 MGI:3033879 MGI:6155546 NCBI chrNW_004936580:963,176...991,732 JBrowse link
G Ctsz cathepsin Z ISO (PMID:19433310) CAFA PMID:19433310 NCBI chrNW_004936530:1,482,007...1,490,685 JBrowse link
G CUNH12orf66 chromosome unknown C12orf66 homolog ISO HPA GO_REF:0000052 NCBI chrNW_004936545:2,577,388...2,602,698 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 colocalizes_with ISO (PMID:24790097)
(PMID:21540189)
UniProtKB PMID:21540189 PMID:24790097 NCBI chrNW_004936469:39,794,613...39,798,448 JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:23723238) UniProtKB PMID:23723238 NCBI chrNW_004936755:871,935...1,024,538 JBrowse link
G Doc2a double C2 domain alpha ISO PMID:18354201 UniProt PMID:18354201 RGD:8554104 NCBI chrNW_004936501:12,458,537...12,463,857 JBrowse link
G Dpp7 dipeptidyl peptidase 7 ISO (MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:6155546 NCBI chrNW_004936669:868,889...872,982 JBrowse link
G Dram1 DNA damage regulated autophagy modulator 1 ISO (PMID:19895784) UniProtKB PMID:19895784 NCBI chrNW_004936492:12,171,642...12,206,845 JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 ISO (PMID:19556885), (PMID:19895784) UniProtKB PMID:19556885 PMID:19895784 NCBI chrNW_004936704:2,488,370...2,513,042 JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:24790097) UniProtKB PMID:24790097 NCBI chrNW_004936536:8,844,778...8,853,442 JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 colocalizes_with ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004936473:23,011,888...23,042,497 JBrowse link
G Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 colocalizes_with ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004936475:17,012,911...17,036,290 JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 colocalizes_with ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chrNW_004936704:653,434...736,660 JBrowse link
G Epdr1 ependymin related 1 ISO (PMID:30729188)
(MGI:3696320|PMID:16954209), (MGI:6155546|PMID:29514215)
UniProt
MGI
PMID:16954209 PMID:29514215 PMID:30729188 MGI:3696320 MGI:6155546 NCBI chrNW_004936478:13,270,227...13,296,711 JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog ISO (PMID:29130391) UniProt PMID:29130391 NCBI chrNW_004936517:841,402...941,054 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:3032479|PMID:14699054) MGI PMID:14699054 MGI:3032479 NCBI chrNW_004936477:21,591,772...21,606,289 JBrowse link
G Fuca1 alpha-L-fucosidase 1 ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004936474:8,995,525...9,012,396 JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 ISO (PMID:20100911) UniProtKB PMID:20100911 NCBI chrNW_004936596:3,938...81,226 JBrowse link
G Gaa alpha glucosidase ISO (PMID:9505277)
(MGI:3706473|PMID:15207257)
BHF-UCL
MGI
RGD
PMID:2193931 PMID:8702598 PMID:8710802 PMID:9505277 PMID:15207257 MGI:3706473 RGD:1599504 RGD:1599506 RGD:1625498 NCBI chrNW_004936594:4,125,595...4,142,261 JBrowse link
G Gabarap GABA type A receptor-associated protein ISO (MGI:1929594|PMID:11146101) MGI PMID:11146101 MGI:1929594 NCBI chrNW_004936595:534,042...536,289 JBrowse link
G Gba glucosylceramidase beta ISO (MGI:6274951|PMID:27789271)
(PMID:25202012)
RGD
UniProt
ARUK-UCL
PMID:3019325 PMID:25202012 PMID:27789271 MGI:6274951 RGD:12791270 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G Gfap glial fibrillary acidic protein colocalizes_with ISO (PMID:20797626) ParkinsonsUK-UCL PMID:20797626 NCBI chrNW_004936541:1,265,915...1,275,232 JBrowse link
G Gla galactosidase alpha ISO (PMID:1332979)
(MGI:3525994|PMID:15629890)
UniProtKB
MGI
RGD
PMID:1332979 PMID:8702598 PMID:15629890 MGI:3525994 RGD:1625498 NCBI chrNW_004936813:474,938...484,753 JBrowse link
G Glb1 galactosidase beta 1 ISO (MGI:6155546|PMID:29514215) RGD
MGI
PMID:4407614 PMID:8702598 PMID:29514215 MGI:6155546 RGD:1598982 RGD:1625498 NCBI chrNW_004936473:23,348,431...23,440,271 JBrowse link
G Glmp glycosylated lysosomal membrane protein ISO (PMID:19556463)
(MGI:3852599|PMID:19489740)
UniProtKB
UniProt
PMID:19489740 PMID:19556463 MGI:3852599 NCBI chrNW_004936580:5,526,101...5,528,984 JBrowse link
G Gm2a GM2 ganglioside activator ISO RGD PMID:8948454 RGD:1598996 NCBI chrNW_004936647:4,126,524...4,140,800 JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase ISO (MGI:6155546|PMID:29514215) RGD
MGI
PMID:3161730 PMID:29514215 MGI:6155546 RGD:1600571 NCBI chrNW_004936545:2,974,627...3,010,586 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:1765846 RGD:2289376 NCBI chrNW_004936636:617,376...640,424 JBrowse link
G Gpc3 glypican 3 ISO (MGI:3790551|PMID:18477453) MGI PMID:18477453 MGI:3790551 NCBI chrNW_004936691:1,060,013...1,459,736 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO (MGI:6370252|PMID:31424425) UniProt PMID:31424425 MGI:6370252 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Grn granulin precursor ISO (PMID:26370502), (PMID:28073925), (PMID:28541286), (PMID:28743268)
(MGI:5905514|PMID:28073925), (MGI:6274951|PMID:27789271)
HPA
UniProt
PMID:26370502 PMID:27789271 PMID:28073925 PMID:28541286 PMID:28743268 GO_REF:0000052 MGI:5905514 MGI:6274951 NCBI chrNW_004936541:793,548...800,271 JBrowse link
G Gusb glucuronidase beta ISO (MGI:53945|PMID:4841576), (MGI:6155546|PMID:29514215) RGD
MGI
PMID:4841576 PMID:8702598 PMID:29514215 MGI:53945 MGI:6155546 RGD:1625498 NCBI chrNW_004936543:7,721,273...7,732,468 JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO (PMID:15998323) UniProtKB PMID:15998323 NCBI chrNW_004936485:18,996,016...19,017,908 JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:1271008|PMID:9645704), (MGI:3033879|PMID:11854359) MGI PMID:9645704 PMID:11854359 MGI:1271008 MGI:3033879 NCBI chrNW_004936471:31,712,485...31,738,273 JBrowse link
G Hexb hexosaminidase subunit beta ISO (MGI:3033879|PMID:11854359), (MGI:6155546|PMID:29514215) RGD
MGI
PMID:8702598 PMID:9041125 PMID:11854359 PMID:29514215 MGI:3033879 MGI:6155546 RGD:1599437 RGD:1625498 NCBI chrNW_004936549:1,918,482...1,943,665 JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate ISO HPA GO_REF:0000052 NCBI chrNW_004936594:5,285,678...5,301,267 JBrowse link
G Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ISO (PMID:12663659) UniProtKB PMID:12663659 NCBI chrNW_004936657:1,075,300...1,104,328 JBrowse link
G Hpse heparanase ISO (PMID:15126626) UniProtKB PMID:15126626 NCBI chrNW_004936738:1,308,350...1,341,421 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:23880665 RGD:10059327 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Hyal1 hyaluronidase 1 ISO (PMID:16600643), (PMID:20572808) UniProtKB PMID:16600643 PMID:20572808 NCBI chrNW_004936529:1,838,212...1,842,399 JBrowse link
G Hyal2 hyaluronidase 2 ISO (PMID:16600643), (PMID:9712871) UniProtKB PMID:9712871 PMID:16600643 NCBI chrNW_004936529:1,845,445...1,851,106 JBrowse link
G Hyal3 hyaluronidase 3 ISO (PMID:16600643) UniProtKB PMID:16600643 NCBI chrNW_004936529:1,831,639...1,837,314 JBrowse link
G Ids iduronate 2-sulfatase ISO (PMID:10838181)
(MGI:6368061|PMID:15149955)
UniProt PMID:10838181 PMID:15149955 MGI:6368061 NCBI chrNW_004936513:62,966...88,844 JBrowse link
G Idua alpha-L-iduronidase ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
G Ifi30 IFI30 lysosomal thiol reductase ISO (PMID:10639150)
(MGI:2153425|PMID:11701933), (MGI:5009354|PMID:20538950)
UniProtKB
UniProt
PMID:10639150 PMID:11701933 PMID:20538950 MGI:2153425 MGI:5009354 NCBI chrNW_004936596:3,003,366...3,007,003 JBrowse link
G Irgm immunity related GTPase M ISO (MGI:4430426|PMID:20072621) UniProt PMID:20072621 MGI:4430426 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Itm2c integral membrane protein 2C ISO (PMID:14592447)
(MGI:4821078|PMID:14592447)
UniProtKB
UniProt
PMID:14592447 MGI:4821078 NCBI chrNW_004936525:5,913,913...5,927,385 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 ISO (PMID:21957902) BHF-UCL PMID:21957902 NCBI chrNW_004936794:707,122...994,206 JBrowse link
G Klhl22 kelch like family member 22 colocalizes_with ISO (PMID:29769719) UniProtKB PMID:29769719 NCBI chrNW_004936619:2,854,915...2,899,386 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 colocalizes_with ISO (PMID:15613468)
(MGI:2182212|PMID:11486041), (MGI:2673073|PMID:12925704), (MGI:2687086|PMID:14643301), (MGI:3033879|PMID:11854359), (MGI:3037131|PMID:15006695), (MGI:3054306|PMID:15294975), (MGI:3527911|PMID:15588329), (MGI:3575390|PMID:14627652), (MGI:3615690|PMID:16415873), (MGI:3654230|PMID:16542649), (MGI:3706740|PMID:10787428), (MGI:3790551|PMID:18477453), (MGI:5505712|PMID:23926254), (MGI:5515840|PMID:24035762), (MGI:5520108|PMID:24029230), (MGI:5806548|PMID:26965651), (MGI:5881894|PMID:26432893)
PMID:15469932
(PMID:15052268), (PMID:15292400), (PMID:15613468), (PMID:16542649), (PMID:22792322), (PMID:23704327)
UniProtKB
MGI
UniProt
PMID:10787428 PMID:11486041 PMID:11854359 PMID:12925704 PMID:14627652 PMID:14643301 PMID:15006695 PMID:15052268 PMID:15292400 PMID:15294975 PMID:15469932 PMID:15588329 PMID:15613468 PMID:16415873 PMID:16542649 PMID:18477453 PMID:22792322 PMID:23704327 PMID:23926254 PMID:24029230 PMID:24035762 PMID:26432893 PMID:26965651 MGI:2182212 MGI:2673073 MGI:2687086 MGI:3033879 MGI:3037131 MGI:3054306 MGI:3527911 MGI:3575390 MGI:3615690 MGI:3654230 MGI:3706740 MGI:3790551 MGI:5505712 MGI:5515840 MGI:5520108 MGI:5806548 MGI:5881894 RGD:15090831 NCBI chrNW_004936472:377,359...389,121 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:12536145), (PMID:15229288), (PMID:19535332), (PMID:28743268)
(MGI:2673081|PMID:12775715), (MGI:2679144|PMID:14557411), (MGI:3604923|PMID:16093322), (MGI:3619505|PMID:16399794), (MGI:3850356|PMID:19549681), (MGI:5565633|PMID:24334765)
MGI
RGD
PMID:11082038 PMID:12536145 PMID:12775715 PMID:14557411 PMID:15229288 PMID:16093322 PMID:16399794 PMID:19337031 PMID:19535332 PMID:19549681 PMID:24334765 PMID:28743268 MGI:2673081 MGI:2679144 MGI:3604923 MGI:3619505 MGI:3850356 MGI:5565633 RGD:1581607 RGD:4892338 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:5527134 NCBI chrNW_004936566:365,326...394,985 JBrowse link
G Lamp5 lysosomal associated membrane protein family member 5 ISO (MGI:5751042|PMID:25592972) MGI PMID:25592972 MGI:5751042 NCBI chrNW_004936485:9,952,975...9,964,358 JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISO (PMID:20544018) UniProtKB PMID:20544018 NCBI chrNW_004936498:1,446,794...1,459,590 JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 ISO (PMID:22980980) UniProtKB PMID:22980980 NCBI chrNW_004936543:408,345...411,723 JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ISO (PMID:22980980) UniProtKB PMID:22980980 NCBI chrNW_004936704:1,830,470...1,835,966 JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chrNW_004936470:44,917,462...44,981,773 JBrowse link
G Laptm5 lysosomal protein transmembrane 5 ISO (MGI:3803048|PMID:18619870), (MGI:4460047|PMID:20519653)
PMID:8661146
(PMID:8661146)
RGD
ARUK-UCL
PMID:8661146 PMID:11295227 PMID:18619870 PMID:20519653 MGI:3803048 MGI:4460047 RGD:39458012 RGD:633121 NCBI chrNW_004936474:14,102,080...14,119,592 JBrowse link
G Lars1 leucyl-tRNA synthetase 1 ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004936504:8,500,024...8,568,477 JBrowse link
G Ldlr low density lipoprotein receptor ISO (PMID:15166224), (PMID:17461796)
(MGI:3619161|PMID:11092755)
BHF-UCL
MGI
PMID:11092755 PMID:15166224 PMID:17461796 MGI:3619161 NCBI chrNW_004936659:1,259,405...1,300,545 JBrowse link
G Lgmn legumain ISO PMID:9742219
(MGI:1303164|PMID:9742219)
UniProt PMID:9742219 MGI:1303164 RGD:704328 NCBI chrNW_004936733:772,764...792,792 JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:10847593 RGD:2292601 NCBI chrNW_004936508:3,928,467...3,983,481 JBrowse link
G Lmbrd1 LMBR1 domain containing 1 ISO (MGI:5543853|PMID:24078630) MGI PMID:24078630 MGI:5543853 NCBI chrNW_004936618:1,694,886...1,792,586 JBrowse link
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain ISO (MGI:3033879|PMID:11854359) MGI PMID:11854359 MGI:3033879 NCBI chrNW_004936476:25,846,653...25,852,006 JBrowse link
G LOC101961309 HLA class II histocompatibility antigen, DO beta chain ISO (PMID:8890155) MGI PMID:8890155 NCBI chrNW_004936476:25,932,926...25,937,024 JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:3033877|PMID:7584146), (MGI:3033879|PMID:11854359) MGI PMID:7584146 PMID:11854359 MGI:3033877 MGI:3033879 NCBI chrNW_004936476:25,836,163...25,840,191 JBrowse link
G LOC101968921 angiotensin-converting enzyme ISO (PMID:11076943) BHF-UCL PMID:11076943 NCBI chrNW_004936541:4,157,847...4,178,156 JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain ISO (PMID:8890155) MGI PMID:8890155 NCBI chrNW_004936727:540,225...544,968 JBrowse link
G LOC101974571 cytochrome b ascorbate-dependent protein 3 ISO (MGI:3695337|PMID:16996694) MGI PMID:16996694 MGI:3695337 NCBI chrNW_004936581:1,685,876...1,696,159 JBrowse link
G LOC101977071 sialin ISO RGD PMID:15516337 RGD:1624225 NCBI chrNW_004936859:668,900...684,207 JBrowse link
G Lrba LPS responsive beige-like anchor protein ISO (MGI:1932145|PMID:11254716) UniProt PMID:11254716 MGI:1932145 NCBI chrNW_004936689:429,907...1,080,226 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (MGI:5572872|PMID:17120249) UniProt PMID:17120249 MGI:5572872 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Man2b1 mannosidase alpha class 2B member 1 ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004936659:1,776,212...1,793,651 JBrowse link
G Man2b2 mannosidase alpha class 2B member 2 ISO RGD PMID:8110182 RGD:2316679 NCBI chrNW_004936477:18,543,541...18,571,002 JBrowse link
G Manba mannosidase beta ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004936520:616,762...715,010 JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (PMID:14722266) UniProtKB PMID:14722266 NCBI chrNW_004936555:1,810,896...2,097,870 JBrowse link
G Marchf3 membrane associated ring-CH-type finger 3 ISO (PMID:14722266) UniProtKB PMID:14722266 NCBI chrNW_004936504:237,260...422,587 JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 ISO (PMID:14722266) UniProtKB PMID:14722266 NCBI chrNW_004936728:27,658...32,174 JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate ISO RGD PMID:11955957 RGD:9685324 NCBI chrNW_004936679:2,373,104...2,379,230 JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 ISO (PMID:21224396) UniProtKB PMID:21224396 NCBI chrNW_004936588:4,600,344...4,608,793 JBrowse link
G Mfhas1 malignant fibrous histiocytoma amplified sequence 1 NOT ISO (PMID:24286120) UniProtKB PMID:24286120 NCBI chrNW_004936573:1,567,798...1,662,442 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 ISO (MGI:4836318|PMID:20826447), (MGI:5575728|PMID:24423645) MGI PMID:20826447 PMID:24423645 MGI:4836318 MGI:5575728 NCBI chrNW_004936642:2,745,889...2,833,286 JBrowse link
G Mlc1 modulator of VRAC current 1 ISO PMID:19931615 UniProt PMID:19931615 RGD:2326037 NCBI chrNW_004936629:696,592...719,363 JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO perivascular cells of the bone growth plate erosion zone RGD PMID:14751562 RGD:2296059 NCBI chrNW_004936551:5,040,084...5,050,384 JBrowse link
G Mpz myelin protein zero ISO RGD PMID:16788992 RGD:9685788 NCBI chrNW_004936903:583,942...589,160 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:20381137), (PMID:25936802), (PMID:29750193)
(PMID:22424946)
UniProt
CAFA
PMID:20381137 PMID:22424946 PMID:25936802 PMID:29750193 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Myo5a myosin VA colocalizes_with ISO (PMID:24006491) UniProtKB PMID:24006491 NCBI chrNW_004936471:14,105,832...14,257,386 JBrowse link
G Naaa N-acylethanolamine acid amidase ISO (PMID:15655246)
(MGI:6155546|PMID:29514215)
UniProt
MGI
PMID:15655246 PMID:29514215 MGI:6155546 NCBI chrNW_004936598:42,751...56,261 JBrowse link
G Napsa napsin A aspartic peptidase ISO (PMID:14766755)
(MGI:5306315|PMID:14766755)
UniProtKB
UniProt
PMID:14766755 MGI:5306315 NCBI chrNW_004936889:204,337...216,795 JBrowse link
G Ncstn nicastrin ISO (MGI:5751042|PMID:25592972) MGI PMID:25592972 MGI:5751042 NCBI chrNW_004936740:285,789...301,918 JBrowse link
G Neu1 neuraminidase 1 ISO (PMID:25153125), (PMID:8985184)
(MGI:2181233|PMID:9425240)
UniProtKB
MGI
RGD
PMID:2393382 PMID:8985184 PMID:9425240 PMID:25153125 MGI:2181233 RGD:7242745 NCBI chrNW_004936727:1,683,283...1,687,130 JBrowse link
G Neu4 neuraminidase 4 NOT ISO (PMID:14962670)
(PMID:15213228)
UniProtKB PMID:14962670 PMID:15213228 NCBI chrNW_004936745:172,983...175,470 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (MGI:3706740|PMID:10787428), (MGI:5292275|PMID:21896731), (MGI:5305553|PMID:22065762) MGI PMID:10787428 PMID:21896731 PMID:22065762 MGI:3706740 MGI:5292275 MGI:5305553 NCBI chrNW_004936550:2,983,172...3,032,222 JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO (PMID:11125141), (PMID:15937921)
(MGI:6155546|PMID:29514215)
HGNC
MGI
PMID:11125141 PMID:15937921 PMID:29514215 MGI:6155546 NCBI chrNW_004936488:3,664,171...3,676,438 JBrowse link
G P2ry2 purinergic receptor P2Y2 colocalizes_with ISO RGD PMID:15924261 RGD:2316682 NCBI chrNW_004936498:2,432,436...2,444,495 JBrowse link
G Pax2 paired box 2 ISO RGD PMID:15149326 RGD:2316747 NCBI chrNW_004936600:4,850,594...4,939,010 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:17461796), (PMID:18039658) UniProtKB PMID:17461796 PMID:18039658 NCBI chrNW_004936522:6,271,339...6,300,202 JBrowse link
G Pcyox1 prenylcysteine oxidase 1 ISO (PMID:10585463)
(MGI:6155546|PMID:29514215)
BHF-UCL
MGI
PMID:10585463 PMID:29514215 MGI:6155546 NCBI chrNW_004936491:14,422,683...14,439,599 JBrowse link
G Pla2g15 phospholipase A2 group XV ISO (PMID:11790796)
(MGI:6155546|PMID:29514215)
UniProtKB
MGI
PMID:11790796 PMID:29514215 MGI:6155546 NCBI chrNW_004936475:18,571,599...18,584,977 JBrowse link
G Plbd2 phospholipase B domain containing 2 ISO (MGI:3689664|PMID:17007843), (MGI:3708437|PMID:17105447) MGI PMID:17007843 PMID:17105447 MGI:3689664 MGI:3708437 NCBI chrNW_004936668:3,190,107...3,208,192 JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 ISO (PMID:22115783)
(MGI:3611133|PMID:16188880)
BHF-UCL
MGI
PMID:16188880 PMID:22115783 MGI:3611133 NCBI chrNW_004936570:5,658,052...5,666,711 JBrowse link
G Pon2 paraoxonase 2 ISO RGD PMID:17916643 RGD:2313493 NCBI chrNW_004936585:4,862,378...4,894,061 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 ISO (MGI:1276629|PMID:9685319), (MGI:5795821|PMID:19941651)
(MGI:3608104|PMID:16242638)
(PMID:11020216), (PMID:19941651), (PMID:8895569)
RGD
MGI
UniProtKB
PMID:8895569 PMID:9685319 PMID:10327204 PMID:11020216 PMID:16242638 PMID:19941651 MGI:1276629 MGI:3608104 MGI:5795821 RGD:1581146 NCBI chrNW_004936474:21,881,692...21,906,564 JBrowse link
G Prcp prolylcarboxypeptidase ISO (MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:6155546 NCBI chrNW_004936498:11,037,294...11,109,657 JBrowse link
G Prss16 serine protease 16 ISO (PMID:10527559)
(MGI:5306331|PMID:10527559)
UniProtKB
UniProt
PMID:10527559 MGI:5306331 NCBI chrNW_004936671:2,873,411...2,881,367 JBrowse link
G Psap prosaposin ISO (PMID:22431521), (PMID:26370502), (PMID:28541286)
(MGI:2667786|PMID:12867159), (MGI:4368056|PMID:19732768), (MGI:6155546|PMID:29514215)
UniProt
MGI
PMID:12867159 PMID:19732768 PMID:22431521 PMID:26370502 PMID:28541286 PMID:29514215 MGI:2667786 MGI:4368056 MGI:6155546 NCBI chrNW_004936521:6,975,844...7,009,460 JBrowse link
G Rab12 RAB12, member RAS oncogene family ISO (MGI:5448516|PMID:21718402) UniProt PMID:21718402 MGI:5448516 NCBI chrNW_004936670:2,315,930...2,338,489 JBrowse link
G Rab14 RAB14, member RAS oncogene family ISO PMID:15004230 UniProt PMID:15004230 RGD:8554557 NCBI chrNW_004936487:9,675,517...9,699,469 JBrowse link
G Rab27a RAB27A, member RAS oncogene family ISO (PMID:15548590) UniProtKB PMID:15548590 NCBI chrNW_004936471:16,738,204...16,815,561 JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO (PMID:25767741) ParkinsonsUK-UCL PMID:25767741 NCBI chrNW_004936736:1,304,290...1,360,412 JBrowse link
G Rab7a RAB7A, member RAS oncogene family colocalizes_with ISO (PMID:18272684)
(MGI:6356112|PMID:29712939)
(PMID:15078902)
BHF-UCL
MGI
HPA
PMID:15078902 PMID:18272684 PMID:29712939 GO_REF:0000052 MGI:6356112 NCBI chrNW_004936798:297,600...304,929 JBrowse link
G Rab7b RAB7B, member RAS oncogene family ISO (PMID:20375062)
(MGI:3834524|PMID:17395780), (MGI:4355098|PMID:19587007)
UniProtKB
UniProt
PMID:17395780 PMID:19587007 PMID:20375062 MGI:3834524 MGI:4355098 NCBI chrNW_004936557:6,504,562...6,519,219 JBrowse link
G Rab9a RAB9A, member RAS oncogene family ISO (PMID:15078902) MGI PMID:15078902 NCBI chrNW_004936470:3,253,631...3,275,078 JBrowse link
G Ramp3 receptor activity modifying protein 3 colocalizes_with ISO (PMID:15613468) UniProtKB PMID:15613468 NCBI chrNW_004936478:19,977,618...20,001,366 JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 ISO (PMID:28561066) UniProt PMID:28561066 NCBI chrNW_004936590:260,685...335,143 JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase NOT ISO (PMID:18450452) UniProtKB PMID:18450452 NCBI chrNW_004936538:139,690...203,600 JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:18272684) BHF-UCL PMID:18272684 NCBI chrNW_004936538:7,775,942...7,779,563 JBrowse link
G Rnaset2 ribonuclease T2 ISO (PMID:16620762) UniProtKB PMID:16620762 NCBI chrNW_004936489:16,540,558...16,555,669 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:21203937) UniProtKB PMID:21203937 NCBI chrNW_004936497:3,357,464...3,421,813 JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 ISO (PMID:20381137)
(PMID:22424946)
HPA
CAFA
PMID:20381137 PMID:22424946 GO_REF:0000052 NCBI chrNW_004936594:4,427,225...4,758,081 JBrowse link
G Rraga Ras related GTP binding A ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rragb Ras related GTP binding B ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004936819:946,874...988,531 JBrowse link
G Rragd Ras related GTP binding D ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004936510:2,810,028...2,849,792 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460) UniProtKB PMID:15146460 NCBI chrNW_004936594:4,195,217...4,203,802 JBrowse link
G Siae sialic acid acetylesterase ISO (MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:6155546 NCBI chrNW_004936743:1,105,461...1,142,028 JBrowse link
G Sidt2 SID1 transmembrane family member 2 ISO (PMID:28277980)
(MGI:5908462|PMID:28724756), (MGI:5908512|PMID:27046251), (MGI:5909194|PMID:28277980)
UniProtKB
UniProt
PMID:27046251 PMID:28277980 PMID:28724756 MGI:5908462 MGI:5908512 MGI:5909194 NCBI chrNW_004936542:2,426,937...2,443,721 JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 NOT ISO (PMID:21359217) AgBase PMID:21359217 NCBI chrNW_004936485:14,979,838...14,999,047 JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:3695780|PMID:16905747), (MGI:3758128|PMID:17620357) MGI PMID:16905747 PMID:17620357 MGI:3695780 MGI:3758128 NCBI chrNW_004936569:888,309...895,991 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO (PMID:12475959) UniProtKB PMID:12475959 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Slc2a13 solute carrier family 2 member 13 NOT ISO (MGI:6202504|PMID:14749729) ARUK-UCL PMID:14749729 MGI:6202504 NCBI chrNW_004936607:909,691...1,185,550 JBrowse link
G Slc35f6 solute carrier family 35 member F6 ISO (MGI:3692368|PMID:16367739) MGI PMID:16367739 MGI:3692368 NCBI chrNW_004936493:5,731,106...5,747,270 JBrowse link
G Slc36a1 solute carrier family 36 member 1 ISO PMID:11959859
PMID:12598615
PMID:11390972
MGI
UniProt
PMID:11390972 PMID:11959859 PMID:12598615 RGD:633315 RGD:633316 RGD:8554808 NCBI chrNW_004936515:11,210,094...11,255,662 JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:25561175), (PMID:25567906) UniProtKB PMID:25561175 PMID:25567906 NCBI chrNW_004936480:12,103,697...12,198,592 JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 ISO (PMID:18815062), (PMID:20956541), (PMID:27659707) UniProtKB PMID:18815062 PMID:20956541 PMID:27659707 NCBI chrNW_004936842:448,315...452,557 JBrowse link
G Snx1 sorting nexin 1 ISO HPA GO_REF:0000052 NCBI chrNW_004936471:24,569,677...24,617,016 JBrowse link
G Snx14 sorting nexin 14 ISO (PMID:25848753) UniProtKB PMID:25848753 NCBI chrNW_004936510:5,685,342...5,786,672 JBrowse link
G Snx2 sorting nexin 2 ISO HPA GO_REF:0000052 NCBI chrNW_004936575:3,150,409...3,223,420 JBrowse link
G Snx6 sorting nexin 6 ISO HPA GO_REF:0000052 NCBI chrNW_004936494:8,819,695...8,880,298 JBrowse link
G Sod1 superoxide dismutase 1 ISO PMID:7096343 CACAO PMID:7096343 RGD:10047299 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Sort1 sortilin 1 ISO (PMID:28541286) UniProt PMID:28541286 NCBI chrNW_004936704:832,651...901,658 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:20605918) UniProtKB PMID:20605918 NCBI chrNW_004936561:3,826,802...3,844,406 JBrowse link
G Stx7 syntaxin 7 ISO (PMID:18980942) UniProtKB PMID:18980942 NCBI chrNW_004936560:464,667...512,322 JBrowse link
G Syt11 synaptotagmin 11 ISO (MGI:5468041|PMID:23303671), (MGI:5788615|PMID:26450452), (MGI:5913303|PMID:28686317) UniProt PMID:23303671 PMID:26450452 PMID:28686317 MGI:5468041 MGI:5788615 MGI:5913303 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
G Syt7 synaptotagmin 7 ISO PMID:11511344
(MGI:2673073|PMID:12925704), (MGI:4849340|PMID:21041449), (MGI:5645834|PMID:25860611)
PMID:10725327
UniProt PMID:10725327 PMID:11511344 PMID:12925704 PMID:21041449 PMID:25860611 MGI:2673073 MGI:4849340 MGI:5645834 RGD:11041027 RGD:2311145 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:2664004|PMID:12672822), (MGI:3850356|PMID:19549681) MGI PMID:12672822 PMID:19549681 MGI:2664004 MGI:3850356 NCBI chrNW_004936599:2,070,211...2,079,169 JBrowse link
G Tlr7 toll like receptor 7 ISO (MGI:3776596|PMID:18305481) UniProt PMID:18305481 MGI:3776596 NCBI chrNW_004936470:2,593,544...2,610,972 JBrowse link
G Tmem106b transmembrane protein 106B ISO (MGI:5588048|PMID:25066864), (MGI:5701557|PMID:26370502) HPA
UniProt
PMID:25066864 PMID:26370502 GO_REF:0000052 MGI:5588048 MGI:5701557 NCBI chrNW_004936761:1,663,099...1,689,580 JBrowse link
G Tmem175 transmembrane protein 175 ISO (PMID:26317472) UniProtKB PMID:26317472 NCBI chrNW_004936477:22,239,093...22,254,028 JBrowse link
G Tmem192 transmembrane protein 192 ISO (PMID:22736246) HPA PMID:22736246 GO_REF:0000052 NCBI chrNW_004936555:855,096...891,525 JBrowse link
G Tmem25 transmembrane protein 25 ISO (MGI:6370252|PMID:31424425) UniProt PMID:31424425 MGI:6370252 NCBI chrNW_004936542:3,569,735...3,575,987 JBrowse link
G Tmem59 transmembrane protein 59 ISO (PMID:23376921) UniProtKB PMID:23376921 NCBI chrNW_004936522:7,105,240...7,126,701 JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:12359240) UniProtKB PMID:12359240 NCBI chrNW_004936567:3,232,628...3,250,596 JBrowse link
G Tmem97 transmembrane protein 97 ISO (PMID:19583955) UniProtKB PMID:19583955 NCBI chrNW_004936538:4,475,314...4,484,385 JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:22012985)
(MGI:5285159|PMID:20495006)
ParkinsonsUK-UCL
UniProt
PMID:20495006 PMID:22012985 MGI:5285159 NCBI chrNW_004936599:1,301,937...1,343,046 JBrowse link
G Tpp1 tripeptidyl peptidase 1 ISO (PMID:15317752), (PMID:17237713), (PMID:19941651)
(MGI:5795821|PMID:19941651)
(PMID:9295267)
UniProt
UniProtKB
PMID:9295267 PMID:15317752 PMID:17237713 PMID:19941651 MGI:5795821 NCBI chrNW_004936842:669,869...676,706 JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (PMID:27068538) UniProtKB PMID:27068538 NCBI chrNW_004936500:21,960...76,895 JBrowse link
G Tsc2 TSC complex subunit 2 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004936694:1,958,152...1,993,373 JBrowse link
G Unc13d unc-13 homolog D ISO (PMID:15548590) UniProtKB PMID:15548590 NCBI chrNW_004936594:1,008,215...1,023,023 JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator ISO (MGI:3776596|PMID:18305481) UniProt PMID:18305481 MGI:3776596 NCBI chrNW_004936599:2,109,292...2,146,006 JBrowse link
G Uvrag UV radiation resistance associated ISO (PMID:19270696) UniProtKB PMID:19270696 NCBI chrNW_004936498:4,555,325...4,869,099 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (MGI:5805578|PMID:27628032) UniProt PMID:27628032 MGI:5805578 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
G Vma21 vacuolar ATPase assembly factor VMA21 ISO LIFEdb GO_REF:0000054 NCBI chrNW_004936714:1,273,528...1,281,266 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes colocalizes_with ISO (PMID:21148287)
(PMID:11382755)
UniProtKB PMID:11382755 PMID:21148287 NCBI chrNW_004936542:4,022,928...4,035,577 JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes ISO (PMID:11382755) UniProtKB PMID:11382755 NCBI chrNW_004936485:15,879,324...15,900,544 JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes ISO (PMID:11382755) UniProtKB PMID:11382755 NCBI chrNW_004936471:4,289,487...4,297,634 JBrowse link
G Vps26a VPS26, retromer complex component A ISO HPA GO_REF:0000052 NCBI chrNW_004936521:9,269,714...9,308,016 JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes ISO (MGI:5805578|PMID:27628032) UniProt PMID:27628032 MGI:5805578 NCBI chrNW_004936558:2,227,305...2,257,725 JBrowse link
G Vps33b VPS33B late endosome and lysosome associated ISO (PMID:15052268) UniProtKB PMID:15052268 NCBI chrNW_004936483:16,007,448...16,031,353 JBrowse link
G Vps35 VPS35 retromer complex component ISO HPA GO_REF:0000052 NCBI chrNW_004936475:50,476...77,797 JBrowse link
G Vps36 vacuolar protein sorting 36 homolog ISO (MGI:3582124|PMID:15755741) MGI PMID:15755741 MGI:3582124 NCBI chrNW_004936565:4,898,969...4,921,411 JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:10637304) UniProtKB PMID:10637304 NCBI chrNW_004936475:19,432,311...19,444,223 JBrowse link
G Wdr45b WD repeat domain 45B ISO (PMID:28561066) UniProt PMID:28561066 NCBI chrNW_004936923:173,515...192,616 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (MGI:5499037|PMID:23776219) MGI PMID:23776219 MGI:5499037 NCBI chrNW_004936592:3,321,564...3,379,015 JBrowse link
autolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:3690270|PMID:16714284) UniProt PMID:16714284 MGI:3690270 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Fth1 ferritin heavy chain 1 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936581:1,118,905...1,120,592 JBrowse link
G Ftl ferritin light chain ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936664:2,976,325...2,977,878 JBrowse link
G Irgm immunity related GTPase M ISO (MGI:3656111|PMID:16888103) UniProt PMID:16888103 MGI:3656111 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:5749311 NCBI chrNW_004936472:377,359...389,121 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:19640926) ParkinsonsUK-UCL PMID:19640926 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Ncoa4 nuclear receptor coactivator 4 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936728:376,915...402,539 JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004936517:4,009,938...4,145,518 JBrowse link
G Sqstm1 sequestosome 1 ISO (PMID:19640926)
(MGI:5749311|PMID:26284655)
ParkinsonsUK-UCL
MGI
PMID:19640926 PMID:26284655 MGI:5749311 NCBI chrNW_004936739:943,080...955,296 JBrowse link
azurophil granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa11 annexin A11 ISO (PMID:9188810) UniProtKB PMID:9188810 NCBI chrNW_004936521:231,294...275,138 JBrowse link
G Hexa hexosaminidase subunit alpha ISO (PMID:25645918) UniProtKB PMID:25645918 NCBI chrNW_004936471:31,712,485...31,738,273 JBrowse link
G Hexb hexosaminidase subunit beta ISO (PMID:25645918) UniProtKB PMID:25645918 NCBI chrNW_004936549:1,918,482...1,943,665 JBrowse link
G Mpo myeloperoxidase ISO (PMID:2981589) UniProtKB PMID:2981589 NCBI chrNW_004936490:4,809,773...4,819,070 JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:16387842 RGD:1580263 NCBI chrNW_004936558:5,162,471...5,302,488 JBrowse link
G Olfm4 olfactomedin 4 NOT ISO (PMID:23922742) UniProtKB PMID:23922742 NCBI chrNW_004936667:905,556...923,105 JBrowse link
G Snap23 synaptosome associated protein 23 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004936471:5,784,070...5,818,644 JBrowse link
G Stx3 syntaxin 3 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004936581:2,944,230...2,976,957 JBrowse link
G Stx7 syntaxin 7 ISO (PMID:20170677) UniProtKB PMID:20170677 NCBI chrNW_004936560:464,667...512,322 JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004936588:4,688,221...4,696,075 JBrowse link
azurophil granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prss57 serine protease 57 ISO (PMID:23904161) UniProtKB PMID:23904161 NCBI chrNW_004936588:255,998...260,273 JBrowse link
azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp1 vesicle associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chrNW_004936709:1,297,820...1,304,793 JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004936958:345,055...393,384 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:8662539) ParkinsonsUK-UCL PMID:8662539 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
cytolytic granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:4430768|PMID:19915045) MGI PMID:19915045 MGI:4430768 NCBI chrNW_004936472:377,359...389,121 JBrowse link
G Prf1 perforin 1 ISO (PMID:9756476)
(MGI:4430768|PMID:19915045), (MGI:66009|PMID:8164737)
UniProtKB
UniProt
PMID:8164737 PMID:9756476 PMID:19915045 MGI:4430768 MGI:66009 NCBI chrNW_004936521:8,057,874...8,060,695 JBrowse link
G Rnf19b ring finger protein 19B ISO (MGI:4430768|PMID:19915045) MGI PMID:19915045 MGI:4430768 NCBI chrNW_004936474:15,827,800...15,850,405 JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO (PMID:19804848) UniProtKB PMID:19804848 NCBI chrNW_004936588:4,688,221...4,696,075 JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004936587:4,806,537...4,906,301 JBrowse link
G Cdip1 cell death inducing p53 target 1 ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004936530:4,559,062...4,578,896 JBrowse link
G Gfap glial fibrillary acidic protein ISO PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chrNW_004936541:1,265,915...1,275,232 JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004936530:9,409,378...9,421,974 JBrowse link
endolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine rich glycoprotein ISO (MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:5527134 NCBI chrNW_004936578:3,285,986...3,295,876 JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chrNW_004936530:9,089,478...9,264,563 JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004936553:6,628,131...6,629,027 JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO (MGI:5689086|PMID:23708524) GO_Central PMID:23708524 MGI:5689086 NCBI chrNW_004936798:297,600...304,929 JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:26134396) ParkinsonsUK-UCL PMID:26134396 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:28784760), (PMID:9927649) UniProtKB PMID:9927649 PMID:28784760 NCBI chrNW_004936550:2,983,172...3,032,222 JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:25238095), (PMID:29224352)
(MGI:6112943|PMID:29155995), (MGI:6278628|PMID:21277849)
UniProt PMID:21277849 PMID:25238095 PMID:29155995 PMID:29224352 MGI:6112943 MGI:6278628 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:29053970) UniProt PMID:29053970 NCBI chrNW_004936480:12,103,697...12,198,592 JBrowse link
G Slc46a3 solute carrier family 46 member 3 ISO (PMID:26631267) FlyBase PMID:26631267 NCBI chrNW_004936472:23,779,294...23,800,088 JBrowse link
lysosomal lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:15578272 RGD:2317835 NCBI chrNW_004936520:10,140,784...10,410,082 JBrowse link
G Gba glucosylceramidase beta ISO (MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:3773765 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 ISO PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chrNW_004936477:17,025,057...17,046,353 JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 ISO PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chrNW_004936609:1,682,727...1,736,560 JBrowse link
G Pld3 phospholipase D family member 3 ISO (PMID:30312375) UniProt PMID:30312375 NCBI chrNW_004936661:2,741,523...2,763,945 JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO (MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:3773765 NCBI chrNW_004936676:167,482...225,827 JBrowse link
lysosomal matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 MGI
RGD
PMID:9038169 PMID:18644871 RGD:10059368 RGD:10412301 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO PMID:18644871 MGI PMID:18644871 RGD:10412301 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 ISO (PMID:10748049), (PMID:17977821), (PMID:18952056) UniProtKB PMID:10748049 PMID:17977821 PMID:18952056 NCBI chrNW_004936558:1,689,832...1,718,306 JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:16946495) UniProtKB PMID:16946495 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 ISO (PMID:27456980) UniProt PMID:27456980 NCBI chrNW_004936488:3,526,875...3,538,851 JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase ISO (MGI:5700445|PMID:26491015) UniProt PMID:26491015 MGI:5700445 NCBI chrNW_004936473:2,687,784...2,732,413 JBrowse link
G Anxa2 annexin A2 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004936471:21,274,112...21,329,286 JBrowse link
G Anxa6 annexin A6 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004936647:3,978,047...4,029,485 JBrowse link
G Arl8b ADP ribosylation factor like GTPase 8B colocalizes_with ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004936577:4,430,939...4,475,186 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:23499937) ParkinsonsUK-UCL PMID:23499937 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 ISO (MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:2387737 NCBI chrNW_004936487:3,801,745...3,809,997 JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor ISO (MGI:5641105|PMID:25839652) CACAO PMID:25839652 MGI:5641105 NCBI chrNW_004936493:5,333,151...5,338,157 JBrowse link
G Cd63 CD63 molecule ISO (PMID:22431521), (PMID:23632027) UniProtKB PMID:22431521 PMID:23632027 NCBI chrNW_004936646:196,002...199,177 JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO (MGI:6414690|PMID:28972156), (MGI:6414716|PMID:26342074) UniProt PMID:26342074 PMID:28972156 MGI:6414690 MGI:6414716 NCBI chrNW_004936516:1,678,610...1,760,099 JBrowse link
G Clcn4 chloride voltage-gated channel 4 ISO (PMID:28972156) UniProt PMID:28972156 NCBI chrNW_004936470:142,862...214,993 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:10332042), (PMID:9384607)
(PMID:15598649), (PMID:23840424)
UniProt PMID:9384607 PMID:10332042 PMID:15598649 PMID:23840424 NCBI chrNW_004936501:11,955,334...11,967,338 JBrowse link
G Cln5 CLN5 intracellular trafficking protein ISO (PMID:12134079) UniProtKB PMID:12134079 NCBI chrNW_004936511:4,283,016...4,291,968 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (PMID:11150305) UniProtKB PMID:11150305 NCBI chrNW_004936677:342,964...360,890 JBrowse link
G Ctsa cathepsin A ISO PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chrNW_004936514:7,131,263...7,136,775 JBrowse link
G Ctsd cathepsin D ISO (PMID:17188016) ARUK-UCL PMID:17188016 NCBI chrNW_004936816:680,798...690,959 JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936755:871,935...1,024,538 JBrowse link
G Ffar4 free fatty acid receptor 4 ISO (PMID:22282525) UniProt PMID:22282525 NCBI chrNW_004936601:1,413,236...1,434,036 JBrowse link
G Flcn folliculin ISO (PMID:24081491), (PMID:24095279), (PMID:27113757), (PMID:29848618), (PMID:31672913) UniProt PMID:24081491 PMID:24095279 PMID:27113757 PMID:29848618 PMID:31672913 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Fnip1 folliculin interacting protein 1 ISO (PMID:24081491), (PMID:29848618) UniProt PMID:24081491 PMID:29848618 NCBI chrNW_004936647:3,329,097...3,428,170 JBrowse link
G Gba glucosylceramidase beta ISO (PMID:17187079)
(MGI:3773765|PMID:18022370)
UniProt
BHF-UCL
PMID:17187079 PMID:18022370 MGI:3773765 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G Gpr137 G protein-coupled receptor 137 ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004936599:4,920,347...4,923,655 JBrowse link
G Gpr137b G protein-coupled receptor 137B ISO (PMID:31036939)
(MGI:6362357|PMID:31173907)
UniProt PMID:31036939 PMID:31173907 MGI:6362357 NCBI chrNW_004936484:16,539,076...16,578,606 JBrowse link
G Gpr137c G protein-coupled receptor 137C ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004936697:2,200,557...2,248,902 JBrowse link
G Gpr143 G protein-coupled receptor 143 ISO (PMID:16621890) UniProtKB PMID:16621890 NCBI chrNW_004936644:196,344...236,659 JBrowse link
G Grn granulin precursor ISO (PMID:21092856) UniProt PMID:21092856 NCBI chrNW_004936541:793,548...800,271 JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ISO (PMID:19823584), (PMID:20650889) UniProtKB PMID:19823584 PMID:20650889 NCBI chrNW_004936570:257,636...297,797 JBrowse link
G Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ISO (PMID:25189619) UniProtKB PMID:25189619 NCBI chrNW_004936600:3,754,324...3,757,048 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 ParkinsonsUK-UCL
RGD
PMID:9038169 PMID:18644871 RGD:10059368 RGD:10412301 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936606:3,144,616...3,158,825 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:15297306), (PMID:21896273)
(MGI:3773765|PMID:18022370), (MGI:5291841|PMID:21896273)
PMID:18644871
PMID:11082038
PMID:8662539
MGI
BHF-UCL
ParkinsonsUK-UCL
PMID:8662539 PMID:11082038 PMID:15297306 PMID:18022370 PMID:18644871 PMID:21896273 MGI:3773765 MGI:5291841 RGD:10412301 RGD:10412302 RGD:1581607 NCBI chrNW_004936479:9,584,221...9,622,330 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (MGI:2675198|PMID:12938238) MGI PMID:12938238 MGI:2675198 NCBI chrNW_004936566:365,326...394,985 JBrowse link
G Laptm4a lysosomal protein transmembrane 4 alpha ISO (PMID:22096579) UniProtKB PMID:22096579 NCBI chrNW_004936493:11,319,923...11,336,204 JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:21224396), (PMID:22096579) UniProtKB PMID:21224396 PMID:22096579 NCBI chrNW_004936470:44,917,462...44,981,773 JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:11274176) MGI PMID:11274176 NCBI chrNW_004936530:9,409,378...9,421,974 JBrowse link
G LOC101959667 HLA class II histocompatibility antigen, DM beta chain ISO (MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:3033877 NCBI chrNW_004936476:25,846,653...25,852,006 JBrowse link
G LOC101963772 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:3033762 NCBI chrNW_004936476:25,836,163...25,840,191 JBrowse link
G LOC101966958 GATOR complex protein WDR59 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936475:23,754,525...23,803,942 JBrowse link
G LOC101969065 mamu class II histocompatibility antigen, DR alpha chain ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chrNW_004936727:540,225...544,968 JBrowse link
G LOC101974571 cytochrome b ascorbate-dependent protein 3 ISO (MGI:3695337|PMID:16996694) UniProt PMID:16996694 MGI:3695337 NCBI chrNW_004936581:1,685,876...1,696,159 JBrowse link
G LOC101977071 sialin ISO (PMID:3961501) MGI PMID:3961501 NCBI chrNW_004936859:668,900...684,207 JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (MGI:4430128|PMID:19880452) UniProt PMID:19880452 MGI:4430128 NCBI chrNW_004936555:1,810,896...2,097,870 JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 ISO RGD PMID:17613490 RGD:7205504 NCBI chrNW_004936588:4,600,344...4,608,793 JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog ISO (PMID:29750193) UniProt PMID:29750193 NCBI chrNW_004936641:3,490,531...3,498,615 JBrowse link
G Mios meiosis regulator for oocyte development ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936585:2,296,713...2,331,737 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Myo7a myosin VIIA ISO (PMID:16001398) UniProtKB PMID:16001398 NCBI chrNW_004936498:5,758,572...5,824,526 JBrowse link
G Ncstn nicastrin ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004936740:285,789...301,918 JBrowse link
G Neu3 neuraminidase 3 ISO (PMID:26251452) UniProt PMID:26251452 NCBI chrNW_004936498:3,897,511...3,915,013 JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004939530:1,745...5,100 JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936501:747,806...783,479 JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) UniProtKB PMID:19116314 NCBI chrNW_004936471:38,612,450...38,952,150 JBrowse link
G Ocln occludin ISO (PMID:28718701) ARUK-UCL PMID:28718701 NCBI chrNW_004936480:99,516...152,834 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO (PMID:16365287), (PMID:29146937)
(MGI:6304515|PMID:29644770)
FlyBase
UniProt
PMID:16365287 PMID:29146937 PMID:29644770 MGI:6304515 NCBI chrNW_004936877:669,407...673,004 JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO (PMID:16365287) FlyBase PMID:16365287 NCBI chrNW_004936544:4,621,222...4,669,808 JBrowse link
G Pla2g4e phospholipase A2 group IVE ISO (MGI:6161105|PMID:29447909) UniProt PMID:29447909 MGI:6161105 NCBI chrNW_004936471:5,300,932...5,370,150 JBrowse link
G Pld3 phospholipase D family member 3 ISO (MGI:6115966|PMID:28128235) UniProt PMID:28128235 MGI:6115966 NCBI chrNW_004936661:2,741,523...2,763,945 JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Rnf13 ring finger protein 13 ISO (MGI:3844769|PMID:19292867) UniProt PMID:19292867 MGI:3844769 NCBI chrNW_004936758:351,220...460,165 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004936497:3,357,464...3,421,813 JBrowse link
G Rnf183 ring finger protein 183 ISO (MGI:6113025|PMID:29300766) UniProt PMID:29300766 MGI:6113025 NCBI chrNW_004936559:302,015...302,757 JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO (MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:3773765 NCBI chrNW_004936676:167,482...225,827 JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936602:3,013,490...3,030,489 JBrowse link
G Seh1l SEH1 like nucleoporin ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936626:2,538,655...2,562,468 JBrowse link
G Sidt2 SID1 transmembrane family member 2 ISO (PMID:17897319)
(MGI:4867132|PMID:20965152)
UniProtKB
UniProt
PMID:17897319 PMID:20965152 MGI:4867132 NCBI chrNW_004936542:2,426,937...2,443,721 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO (PMID:10751401) BHF-UCL
RGD
PMID:10751401 PMID:16449358 RGD:1580424 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Slc15a3 solute carrier family 15 member 3 ISO (MGI:5571205|PMID:24695226) RGD
UniProt
PMID:11336635 PMID:24695226 MGI:5571205 RGD:633591 NCBI chrNW_004936581:1,985,062...1,996,924 JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:5571205 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Slc26a11 solute carrier family 26 member 11 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004936594:4,203,892...4,222,740 JBrowse link
G Slc2a6 solute carrier family 2 member 6 ISO (PMID:30431159) UniProt PMID:30431159 NCBI chrNW_004936669:3,432,206...3,438,849 JBrowse link
G Slc35f6 solute carrier family 35 member F6 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004936493:5,731,106...5,747,270 JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004936480:12,103,697...12,198,592 JBrowse link
G Slc39a14 solute carrier family 39 member 14 ISO (PMID:20682781) UniProt PMID:20682781 NCBI chrNW_004939045:1...7,491 JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISO (PMID:18390834), (PMID:19401385) UniProt PMID:18390834 PMID:19401385 NCBI chrNW_004936520:961,376...1,036,801 JBrowse link
G Slc48a1 solute carrier family 48 member 1 ISO (PMID:18418376) WormBase PMID:18418376 NCBI chrNW_004936512:5,672,952...5,680,502 JBrowse link
G Slc66a1 solute carrier family 66 member 1 ISO (PMID:22822152)
PMID:23169667
UniProtKB
UniProt
PMID:22822152 PMID:23169667 RGD:8553575 NCBI chrNW_004936474:5,573,175...5,588,319 JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:29146937) UniProt PMID:29146937 NCBI chrNW_004936490:10,663,155...10,796,658 JBrowse link
G Sppl2a signal peptide peptidase like 2A ISO (MGI:5291841|PMID:21896273) MGI PMID:21896273 MGI:5291841 NCBI chrNW_004936471:12,700,777...12,730,509 JBrowse link
G Sppl2b signal peptide peptidase like 2B ISO (PMID:15998642) UniProtKB PMID:15998642 NCBI chrNW_004936588:1,399,125...1,408,676 JBrowse link
G Stx17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chrNW_004936524:8,324,562...8,381,244 JBrowse link
G Stx7 syntaxin 7 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004936560:464,667...512,322 JBrowse link
G Stx8 syntaxin 8 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004936595:2,328,763...2,578,788 JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199315) UniProtKB PMID:28199315 NCBI chrNW_004936474:24,788,175...24,837,471 JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO (PMID:22342342) UniProtKB PMID:22342342 NCBI chrNW_004936750:756,602...781,422 JBrowse link
G Tfeb transcription factor EB ISO (PMID:22343943), (PMID:22692423) UniProt PMID:22343943 PMID:22692423 NCBI chrNW_004936476:18,189,096...18,233,622 JBrowse link
G Tm6sf1 transmembrane 6 superfamily member 1 ISO (MGI:5619893|PMID:25422095) UniProt PMID:25422095 MGI:5619893 NCBI chrNW_004936483:17,742,721...17,770,165 JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) UniProtKB PMID:16607040 NCBI chrNW_004936569:803,154...820,000 JBrowse link
G Tmem106b transmembrane protein 106B ISO (PMID:24357581) UniProtKB PMID:24357581 NCBI chrNW_004936761:1,663,099...1,689,580 JBrowse link
G Tmem165 transmembrane protein 165 ISO (PMID:23575229) UniProtKB PMID:23575229 NCBI chrNW_004936482:17,760,532...17,785,466 JBrowse link
G Tmem192 transmembrane protein 192 ISO (PMID:20370317) UniProtKB PMID:20370317 NCBI chrNW_004936555:855,096...891,525 JBrowse link
G Tmem63a transmembrane protein 63A ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004936526:2,653,556...2,690,427 JBrowse link
G Tmem79 transmembrane protein 79 ISO (MGI:5518480|PMID:24060273) UniProt PMID:24060273 MGI:5518480 NCBI chrNW_004936580:5,519,577...5,525,608 JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chrNW_004936567:3,232,628...3,250,596 JBrowse link
G Tpcn1 two pore segment channel 1 ISO (PMID:19620632) UniProtKB PMID:19620632 NCBI chrNW_004936668:3,111,038...3,162,163 JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:19387438), (PMID:19620632)
(MGI:5285171|PMID:19557428)
UniProtKB
UniProt
PMID:19387438 PMID:19557428 PMID:19620632 MGI:5285171 NCBI chrNW_004936599:1,301,937...1,343,046 JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 colocalizes_with ISO (MGI:5775261|PMID:25848864) UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
G Trim23 tripartite motif containing 23 ISO (PMID:9671726) HGNC PMID:9671726 NCBI chrNW_004936480:3,557,699...3,593,514 JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (MGI:5298324|PMID:21753080) UniProt PMID:21753080 MGI:5298324 NCBI chrNW_004936500:21,960...76,895 JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 colocalizes_with ISO (PMID:1376922) UniProtKB PMID:1376922 NCBI chrNW_004936502:12,961,236...12,984,235 JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:21822278) UniProtKB PMID:21822278 NCBI chrNW_004936588:2,565,473...2,578,721 JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO PMID:10459012 RGD
UniProt
PMID:10459012 PMID:15133481 RGD:4892614 RGD:8554473 NCBI chrNW_004936958:345,055...393,384 JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:23217709) UniProtKB
RGD
PMID:15133481 PMID:23217709 RGD:4892614 NCBI chrNW_004936712:1,688,126...1,689,742 JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO (PMID:30709847) UniProt PMID:30709847 NCBI chrNW_004936503:12,606,019...12,857,807 JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004936471:5,457,363...5,512,966 JBrowse link
G Vps41 VPS41 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004936478:14,296,191...14,454,650 JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B ISO (PMID:18033301), (PMID:23217709) UniProtKB PMID:18033301 PMID:23217709 NCBI chrNW_004936495:11,043,813...11,064,113 JBrowse link
G Wdr24 WD repeat domain 24 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004936501:321,877...326,984 JBrowse link
G Wdr81 WD repeat domain 81 ISO (PMID:27126989) UniProtKB PMID:27126989 NCBI chrNW_004936538:7,856,263...7,868,249 JBrowse link
mast cell granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B ISO RGD PMID:1650113 RGD:8548783 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Anxa1 annexin A1 ISO RGD PMID:11005211 RGD:7421660 NCBI chrNW_004936503:9,124,314...9,142,372 JBrowse link
G Clnk cytokine dependent hematopoietic cell linker ISO (MGI:2179131|PMID:10744659) UniProt PMID:10744659 MGI:2179131 NCBI chrNW_004936477:16,364,465...16,427,125 JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:16246270 RGD:1579983 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Srgn serglycin ISO (MGI:3056870|PMID:15231821) UniProt PMID:15231821 MGI:3056870 NCBI chrNW_004936521:9,319,114...9,332,655 JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 ISO (PMID:17548643) BHF-UCL PMID:17548643 NCBI chrNW_004936486:19,389,925...19,403,577 JBrowse link
G Pla2g5 phospholipase A2 group V ISO (MGI:3639848|PMID:16407308) UniProt PMID:16407308 MGI:3639848 NCBI chrNW_004936474:6,131,915...6,150,810 JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine rich glycoprotein ISO (MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:5527134 NCBI chrNW_004936578:3,285,986...3,295,876 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:5527134 NCBI chrNW_004936472:377,359...389,121 JBrowse link
secondary lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhbp corticotropin releasing hormone binding protein ISO RGD PMID:10524337 RGD:5490549 NCBI chrNW_004936549:64,866...78,272 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12106
    cellular anatomical entity 11959
      cytoplasm 7938
        vacuole 403
          lytic vacuole 332
            lysosome 332
              UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
              cytolytic granule + 4
              endolysosome + 4
              lysosomal glycocalyx 0
              lysosomal lumen + 8
              lysosomal membrane + 122
              lysosomal multienzyme complex 0
              mast cell granule 5
              megasome 0
              primary lysosome + 14
              secondary lysosome + 15
Path 2
Term Annotations click to browse term
  cellular_component 12106
    cellular anatomical entity 11959
      intracellular anatomical structure 10230
        intracellular organelle 8584
          intracellular membrane-bounded organelle 7684
            vacuole 403
              lytic vacuole 332
                lysosome 332
                  UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
                  cytolytic granule + 4
                  endolysosome + 4
                  lysosomal glycocalyx 0
                  lysosomal lumen + 8
                  lysosomal membrane + 122
                  lysosomal multienzyme complex 0
                  mast cell granule 5
                  megasome 0
                  primary lysosome + 14
                  secondary lysosome + 15
paths to the root