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ONTOLOGY REPORT - ANNOTATIONS


Term:lysosome
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Accession:GO:0005764 term browser browse the term
Definition:A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
Synonyms:xref: NIF_Subcellular:sao585356902;   Wikipedia:Lysosome


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lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (PMID:11309290) UniProtKB PMID:11309290 NCBI chrNW_004955513:5,035,879...5,051,140
Ensembl chrNW_004955513:5,033,771...5,051,200
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 ISO (MGI:MGI:3581349|PMID:15870284) BHF-UCL PMID:15870284 MGI:MGI:3581349 NCBI chrNW_004955478:3,526,376...3,586,811
Ensembl chrNW_004955478:3,519,368...3,586,811
JBrowse link
G Abcb9 ATP binding cassette subfamily B member 9 ISO (PMID:22641697) UniProtKB PMID:22641697 NCBI chrNW_004955482:5,817,334...5,838,642
Ensembl chrNW_004955482:5,817,334...5,837,220
JBrowse link
G Acp2 acid phosphatase 2, lysosomal ISO (PMID:3160696)
(MGI:MGI:2154041|PMID:11731469)
(MGI:MGI:1930064|PMID:11168643)
MGI
RGD
PMID:3160696, PMID:11168643, PMID:11687729, PMID:11731469 MGI:MGI:1930064, MGI:MGI:2154041, RGD:1600623 NCBI chrNW_004955422:954,108...961,522
Ensembl chrNW_004955422:954,089...961,522
JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant ISO (MGI:MGI:1930064|PMID:11168643)
(MGI:MGI:2154041|PMID:11731469)
MGI PMID:11168643, PMID:11731469 MGI:MGI:1930064, MGI:MGI:2154041 NCBI chrNW_004955495:2,418,113...2,421,181
Ensembl chrNW_004955495:2,418,364...2,421,538
JBrowse link
G Ada adenosine deaminase ISO (PMID:8452534) UniProtKB PMID:8452534 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Aga aspartylglucosaminidase ISO (PMID:8776587)
(MGI:MGI:6155546|PMID:29514215)
UniProtKB
MGI
RGD
PMID:7673341, PMID:8776587, PMID:29514215 MGI:MGI:6155546, RGD:1598777 NCBI chrNW_004955403:30,471,809...30,482,653
Ensembl chrNW_004955403:30,471,809...30,482,653
JBrowse link
G Aldob aldolase, fructose-bisphosphate B ISO RGD PMID:9886486 RGD:1599068 NCBI chrNW_004955419:24,377,427...24,389,909
Ensembl chrNW_004955419:24,377,427...24,389,909
JBrowse link
G Ankrd27 ankyrin repeat domain 27 ISO (PMID:24856514) LIFEdb PMID:24856514 GO_REF:0000054 NCBI chrNW_004955468:5,314,779...5,364,925 JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 ISO (PMID:22022230) UniProtKB PMID:22022230 NCBI chrNW_004955466:11,191,511...11,216,274
Ensembl chrNW_004955466:11,191,511...11,209,388
JBrowse link
G Ap5s1 adaptor related protein complex 5 subunit sigma 1 ISO (PMID:22022230) UniProtKB PMID:22022230 NCBI chrNW_004955415:14,665,450...14,669,456
Ensembl chrNW_004955415:14,664,849...14,672,478
JBrowse link
G Apoe apolipoprotein E ISO RGD PMID:2493483 RGD:7495790 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G App amyloid beta precursor protein colocalizes_with ISO (PMID:21289173), (PMID:23152628) ARUK-UCL PMID:21289173, PMID:23152628 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
JBrowse link
G Aqp2 aquaporin 2 ISO RGD PMID:18843259 RGD:2313123 NCBI chrNW_004955547:547,770...555,764
Ensembl chrNW_004955547:547,064...555,958
JBrowse link
G Arsa arylsulfatase A ISO RGD PMID:15503159 RGD:1599222 NCBI chrNW_004955413:33,624,460...33,629,491
Ensembl chrNW_004955413:33,623,525...33,629,771
JBrowse link
G Arsb arylsulfatase B ISO RGD PMID:1686699 RGD:1599229 NCBI chrNW_004955425:22,120,507...22,281,221
Ensembl chrNW_004955425:22,119,930...22,279,006
JBrowse link
G Arsg arylsulfatase G ISO (PMID:18283100) UniProtKB PMID:18283100 NCBI chrNW_004955478:4,326,669...4,475,559
Ensembl chrNW_004955478:4,341,826...4,434,542
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 ISO (PMID:12764132) UniProt PMID:12764132 NCBI chrNW_004955552:1,623,263...1,660,285
Ensembl chrNW_004955552:1,623,738...1,659,086
JBrowse link
G Ass1 argininosuccinate synthase 1 ISO RGD PMID:10469394 RGD:4142786 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:16964263), (PMID:21542062), (PMID:24603074), (PMID:25392495) ParkinsonsUK-UCL PMID:16964263, PMID:21542062, PMID:24603074, PMID:25392495 NCBI chrNW_004955527:1,805,854...1,823,623
Ensembl chrNW_004955527:1,806,009...1,823,344
JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 ISO (PMID:29127204) UniProt PMID:29127204 NCBI chrNW_004955565:2,006,154...2,029,921 JBrowse link
G Atp6v0c ATPase H+ transporting V0 subunit c ISO RGD PMID:1400263 RGD:631903 NCBI chrNW_004955442:14,791,795...14,798,066
Ensembl chrNW_004955442:14,791,795...14,798,066
JBrowse link
G Bace1 beta-secretase 1 ISO (PMID:16033761), (PMID:23109336), (PMID:27084579), (PMID:27302062) UniProt PMID:16033761, PMID:23109336, PMID:27084579, PMID:27302062 NCBI chrNW_004955412:18,596,643...18,620,089
Ensembl chrNW_004955412:18,596,643...18,620,362
JBrowse link
G Bbc3 BCL2 binding component 3 colocalizes_with ISO (PMID:26212789) ParkinsonsUK-UCL PMID:26212789 NCBI chrNW_004955574:1,167,790...1,174,966 JBrowse link
G Bcl10 BCL10 immune signaling adaptor ISO (PMID:15082780) UniProtKB PMID:15082780 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit ISO (PMID:24549040), (PMID:27559131) UniProtKB PMID:24549040, PMID:27559131 NCBI chrNW_004955472:7,299,092...7,337,591
Ensembl chrNW_004955472:7,310,788...7,337,735
JBrowse link
G Calcrl calcitonin receptor like receptor ISO (PMID:10882736) UniProtKB PMID:10882736 NCBI chrNW_004955403:11,016,753...11,118,494
Ensembl chrNW_004955403:11,080,874...11,118,494
JBrowse link
G Capn1 calpain 1 ISO (MGI:MGI:5543358|PMID:22555453) MGI PMID:22555453 MGI:MGI:5543358 NCBI chrNW_004955422:20,006,448...20,026,984
Ensembl chrNW_004955422:20,004,426...20,025,708
JBrowse link
G Capn2 calpain 2 ISO (MGI:MGI:5543358|PMID:22555453) MGI PMID:22555453 MGI:MGI:5543358 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328
JBrowse link
G Cat catalase ISO RGD PMID:17576767 RGD:2292202 NCBI chrNW_004955422:11,783,973...11,826,970
Ensembl chrNW_004955422:11,781,835...11,827,464
JBrowse link
G Ccdc115 coiled-coil domain containing 115 ISO (MGI:MGI:3616929|PMID:16378758) MGI PMID:16378758 MGI:MGI:3616929 NCBI chrNW_004955459:25,649...30,215
Ensembl chrNW_004955459:25,649...30,215
JBrowse link
G Cckar cholecystokinin A receptor ISO RGD PMID:9169450 RGD:2313345 NCBI chrNW_004955443:18,738,029...18,748,684
Ensembl chrNW_004955443:18,737,974...18,748,727
JBrowse link
G Cd164 CD164 molecule ISO (PMID:11027692) RGD
UniProtKB
PMID:10620506, PMID:11027692 RGD:70675 NCBI chrNW_004955411:34,423,727...34,439,295 JBrowse link
G Cd34 CD34 molecule ISO PMID:18319274 UniProt PMID:18319274 RGD:8553277 NCBI chrNW_004955406:43,116,688...43,130,405
Ensembl chrNW_004955406:43,117,816...43,130,463
JBrowse link
G Cd63 CD63 molecule ISO (MGI:MGI:3042340|PMID:14668490), (MGI:MGI:5804716|PMID:27435297) RGD
MGI
PMID:1634775, PMID:14668490, PMID:27435297 MGI:MGI:3042340, MGI:MGI:5804716, RGD:61549 NCBI chrNW_004955458:3,362,511...3,363,916
Ensembl chrNW_004955458:3,362,511...3,363,981
JBrowse link
G Cd68 CD68 molecule ISO (MGI:MGI:5285055|PMID:21572087) ARUK-UCL PMID:21572087 MGI:MGI:5285055 NCBI chrNW_004955467:9,340,490...9,343,912
Ensembl chrNW_004955467:9,341,364...9,343,836
JBrowse link
G Cd74 CD74 molecule ISO (MGI:MGI:3033879|PMID:11854359), (MGI:MGI:3054306|PMID:15294975), (MGI:MGI:3691984|PMID:11483509) MGI PMID:11483509, PMID:11854359, PMID:15294975 MGI:MGI:3033879, MGI:MGI:3054306, MGI:MGI:3691984 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Chid1 chitinase domain containing 1 ISO (PMID:16357325) UniProtKB PMID:16357325 NCBI chrNW_004955476:11,246,745...11,276,341
Ensembl chrNW_004955476:11,246,490...11,276,341
JBrowse link
G Chmp2b charged multivesicular body protein 2B colocalizes_with ISO (PMID:16041373) UniProtKB PMID:16041373 NCBI chrNW_004955407:6,014,478...6,047,916
Ensembl chrNW_004955407:6,014,478...6,047,916
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:10332042), (PMID:10924275), (PMID:14699076), (PMID:15471887), (PMID:19941651)
(PMID:14644441)
(MGI:MGI:3527911|PMID:15588329), (MGI:MGI:3690270|PMID:16714284), (MGI:MGI:5795821|PMID:19941651), (MGI:MGI:6383759|PMID:11590129)
UniProt
MGI
PMID:10332042, PMID:10924275, PMID:11590129, PMID:14644441, PMID:14699076, PMID:15471887, PMID:15588329, PMID:16714284, PMID:19941651 MGI:MGI:3527911, MGI:MGI:3690270, MGI:MGI:5795821, MGI:MGI:6383759 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
G Cln5 CLN5 intracellular trafficking protein ISO (MGI:MGI:3046133|PMID:15207259), (MGI:MGI:5795821|PMID:19941651), (MGI:MGI:6155546|PMID:29514215)
(PMID:11971870), (PMID:19941651), (PMID:22431521)
MGI
UniProtKB
PMID:11971870, PMID:15207259, PMID:19941651, PMID:22431521, PMID:29514215 MGI:MGI:3046133, MGI:MGI:5795821, MGI:MGI:6155546 NCBI chrNW_004955404:30,229,632...30,235,677 JBrowse link
G Cltc clathrin heavy chain ISO HPA GO_REF:0000052 NCBI chrNW_004955451:3,380,304...3,445,973
Ensembl chrNW_004955451:3,380,304...3,445,973
JBrowse link
G Cpq carboxypeptidase Q ISO (MGI:MGI:6155546|PMID:29514215)
PMID:22127294
MGI
UniProt
PMID:22127294, PMID:29514215 MGI:MGI:6155546, RGD:8554022 NCBI chrNW_004955417:12,585,829...13,020,935
Ensembl chrNW_004955417:12,585,722...13,024,655
JBrowse link
G Cst3 cystatin C ISO RGD PMID:9222450 RGD:2306518 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Cst7 cystatin F ISO (MGI:MGI:6294233|PMID:15212960)
(PMID:15752368), (PMID:18256700), (PMID:22365146)
ARUK-UCL PMID:15212960, PMID:15752368, PMID:18256700, PMID:22365146 MGI:MGI:6294233 NCBI chrNW_004955415:31,082,978...31,086,379
Ensembl chrNW_004955415:31,082,978...31,086,379
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (PMID:11855931), (PMID:12138135), (PMID:15128704), (PMID:18337546)
(MGI:MGI:2388548|PMID:12370309)
UniProtKB
MGI
PMID:11855931, PMID:12138135, PMID:12370309, PMID:15128704, PMID:18337546 MGI:MGI:2388548 NCBI chrNW_004955467:13,151,663...13,169,005
Ensembl chrNW_004955467:13,151,957...13,168,696
JBrowse link
G Ctsb cathepsin B ISO (PMID:1837142), (PMID:2350688)
(MGI:MGI:2664014|PMID:12782676), (MGI:MGI:86330|PMID:9034150)
ARUK-UCL
RGD
MGI
PMID:1837142, PMID:2350688, PMID:8702598, PMID:9034150, PMID:11687729, PMID:12432075, PMID:12782676, PMID:19696938 MGI:MGI:2664014, MGI:MGI:86330, RGD:1600623, RGD:1625498, RGD:2315504, RGD:734525 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809
JBrowse link
G Ctsc cathepsin C ISO PMID:18307834 ParkinsonsUK-UCL
RGD
PMID:8215389, PMID:18307834 RGD:1599644, RGD:8661625 NCBI chrNW_004955414:5,062,355...5,092,631
Ensembl chrNW_004955414:5,062,355...5,092,154
JBrowse link
G Ctsd cathepsin D ISO (PMID:1692625), (PMID:1837142), (PMID:19723497), (PMID:2350688)
(MGI:MGI:1271008|PMID:9645704), (MGI:MGI:1352198|PMID:10591619), (MGI:MGI:2661373|PMID:12676993), (MGI:MGI:2673081|PMID:12775715), (MGI:MGI:3057045|PMID:15452145), (MGI:MGI:3608104|PMID:16242638), (MGI:MGI:5701557|PMID:26370502), (MGI:MGI:86330|PMID:9034150)
ARUK-UCL
MGI
RGD
PMID:1692625, PMID:1837142, PMID:2350688, PMID:8702598, PMID:9034150, PMID:9645704, PMID:10591619, PMID:11687729, PMID:12666874, PMID:12676993, PMID:12775715, PMID:15452145, PMID:16242638, PMID:19723497, PMID:26370502 MGI:MGI:1271008, MGI:MGI:1352198, MGI:MGI:2661373, MGI:MGI:2673081, MGI:MGI:3057045, MGI:MGI:3608104, MGI:MGI:5701557, MGI:MGI:86330, RGD:1299317, RGD:1600623, RGD:1625498 NCBI chrNW_004955422:13,576,315...13,584,267 JBrowse link
G Ctsh cathepsin H ISO (PMID:15196205), (PMID:16822283), (PMID:1837142) UniProtKB
RGD
PMID:1837142, PMID:2005374, PMID:15196205, PMID:16822283 RGD:5686400 NCBI chrNW_004955533:39,237...54,881
Ensembl chrNW_004955533:39,284...54,837
JBrowse link
G Ctsk cathepsin K ISO (MGI:MGI:2664014|PMID:12782676), (MGI:MGI:6155546|PMID:29514215)
(PMID:11082042), (PMID:22365146)
MGI
UniProt
RGD
PMID:11082042, PMID:12782676, PMID:14585819, PMID:22365146, PMID:29514215 MGI:MGI:2664014, MGI:MGI:6155546, RGD:1354673 NCBI chrNW_004955588:149,036...158,093
Ensembl chrNW_004955588:148,748...158,093
JBrowse link
G Ctss cathepsin S ISO (MGI:MGI:3033879|PMID:11854359), (MGI:MGI:6155546|PMID:29514215)
(PMID:15196205)
MGI
UniProtKB
PMID:11854359, PMID:15196205, PMID:29514215 MGI:MGI:3033879, MGI:MGI:6155546 NCBI chrNW_004955413:99,279...124,793
Ensembl chrNW_004955413:99,159...124,042
JBrowse link
G Ctsz cathepsin Z ISO (PMID:19433310) CAFA PMID:19433310 NCBI chrNW_004955445:586,901...597,753
Ensembl chrNW_004955445:586,902...597,753
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 colocalizes_with ISO (PMID:21540189)
(PMID:24790097)
UniProtKB PMID:21540189, PMID:24790097 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:23723238) UniProtKB PMID:23723238 NCBI chrNW_004955455:5,881,631...6,005,514 JBrowse link
G Doc2a double C2 domain alpha ISO PMID:18354201 UniProt PMID:18354201 RGD:8554104 NCBI chrNW_004955493:6,948,089...6,953,835
Ensembl chrNW_004955493:6,947,512...6,953,835
JBrowse link
G Dpp7 dipeptidyl peptidase 7 ISO (MGI:MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955513:5,105,833...5,109,676
Ensembl chrNW_004955513:5,106,430...5,109,483
JBrowse link
G Dram1 DNA damage regulated autophagy modulator 1 ISO (PMID:19895784) UniProtKB PMID:19895784 NCBI chrNW_004955405:37,153,847...37,170,007
Ensembl chrNW_004955405:37,153,561...37,171,309
JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 ISO (PMID:19556885), (PMID:19895784) UniProtKB PMID:19556885, PMID:19895784 NCBI chrNW_004955435:14,664,292...14,704,198
Ensembl chrNW_004955435:14,664,292...14,704,194
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:24790097) UniProtKB PMID:24790097 NCBI chrNW_004955427:21,806,170...21,812,701
Ensembl chrNW_004955427:21,806,192...21,815,031
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 colocalizes_with ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004955620:46,535...82,595
Ensembl chrNW_004955620:46,556...82,595
JBrowse link
G Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 colocalizes_with ISO RGD PMID:21169557 RGD:13207422 NCBI chrNW_004955433:23,262,981...23,286,506
Ensembl chrNW_004955433:23,262,981...23,287,067
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 colocalizes_with ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chrNW_004955435:12,531,651...12,626,969
Ensembl chrNW_004955435:12,531,642...12,627,874
JBrowse link
G Epdr1 ependymin related 1 ISO (MGI:MGI:3696320|PMID:16954209), (MGI:MGI:6155546|PMID:29514215)
(PMID:30729188)
MGI
UniProt
PMID:16954209, PMID:29514215, PMID:30729188 MGI:MGI:3696320, MGI:MGI:6155546 NCBI chrNW_004955460:5,612,589...5,650,222
Ensembl chrNW_004955460:5,612,270...5,650,661
JBrowse link
G Epg5 ectopic P-granules autophagy protein 5 homolog ISO (PMID:29130391) UniProt PMID:29130391 NCBI chrNW_004955402:31,422,848...31,532,189
Ensembl chrNW_004955402:31,422,848...31,532,289
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:MGI:3032479|PMID:14699054) MGI PMID:14699054 MGI:MGI:3032479 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Fuca1 alpha-L-fucosidase 1 ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004955452:3,744,071...3,759,776
Ensembl chrNW_004955452:3,744,755...3,759,676
JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 ISO (PMID:20100911) UniProtKB PMID:20100911 NCBI chrNW_004955420:26,019,621...26,076,846
Ensembl chrNW_004955420:26,019,514...26,074,492
JBrowse link
G Gaa glucosidase alpha, acid ISO (PMID:9505277)
(MGI:MGI:3706473|PMID:15207257)
BHF-UCL
MGI
RGD
PMID:2193931, PMID:8702598, PMID:8710802, PMID:9505277, PMID:15207257 MGI:MGI:3706473, RGD:1599504, RGD:1599506, RGD:1625498 NCBI chrNW_004955506:2,764,959...2,783,231
Ensembl chrNW_004955506:2,764,959...2,783,231
JBrowse link
G Gabarap GABA type A receptor-associated protein ISO (MGI:MGI:1929594|PMID:11146101) MGI PMID:11146101 MGI:MGI:1929594 NCBI chrNW_004955467:9,667,938...9,670,067 JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:6274951|PMID:27789271)
(PMID:25202012)
RGD
UniProt
ARUK-UCL
PMID:3019325, PMID:25202012, PMID:27789271 MGI:MGI:6274951, RGD:12791270 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gfap glial fibrillary acidic protein colocalizes_with ISO (PMID:20797626) ParkinsonsUK-UCL PMID:20797626 NCBI chrNW_004955451:17,695,835...17,703,894
Ensembl chrNW_004955451:17,695,835...17,703,268
JBrowse link
G Gja1 gap junction protein alpha 1 ISO (PMID:22470101) AgBase
RGD
PMID:16162097, PMID:22470101 RGD:1582681 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095
JBrowse link
G Gla galactosidase alpha ISO (PMID:1332979)
(MGI:MGI:3525994|PMID:15629890)
UniProtKB
RGD
MGI
PMID:1332979, PMID:8702598, PMID:15629890 MGI:MGI:3525994, RGD:1625498 NCBI chrNW_004955503:7,526,077...7,535,817
Ensembl chrNW_004955503:7,521,930...7,535,817
JBrowse link
G Glb1 galactosidase beta 1 ISO (MGI:MGI:6155546|PMID:29514215) MGI
RGD
PMID:4407614, PMID:8702598, PMID:29514215 MGI:MGI:6155546, RGD:1598982, RGD:1625498 NCBI chrNW_004955421:230,957...311,504
Ensembl chrNW_004955421:231,076...312,500
JBrowse link
G Glmp glycosylated lysosomal membrane protein ISO (PMID:19556463)
(MGI:MGI:3852599|PMID:19489740)
UniProtKB PMID:19489740, PMID:19556463 MGI:MGI:3852599 NCBI chrNW_004955545:2,436,718...2,439,988
Ensembl chrNW_004955545:2,437,245...2,439,940
JBrowse link
G Gm2a GM2 ganglioside activator ISO RGD PMID:8948454 RGD:1598996 NCBI chrNW_004955408:2,442,406...2,449,426
Ensembl chrNW_004955408:2,442,406...2,449,426
JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase ISO (MGI:MGI:6155546|PMID:29514215) RGD
MGI
PMID:3161730, PMID:29514215 MGI:MGI:6155546, RGD:1600571 NCBI chrNW_004955458:11,471,376...11,500,793
Ensembl chrNW_004955458:11,471,376...11,500,838
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:1765846 RGD:2289376 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Gpc3 glypican 3 ISO (MGI:MGI:3790551|PMID:18477453) MGI PMID:18477453 MGI:MGI:3790551 NCBI chrNW_004955473:969,627...1,431,706
Ensembl chrNW_004955473:969,800...1,431,483
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO (MGI:MGI:6370252|PMID:31424425) UniProt PMID:31424425 MGI:MGI:6370252 NCBI chrNW_004955413:10,358,931...10,780,004
Ensembl chrNW_004955413:10,376,597...10,779,145
JBrowse link
G Grn granulin precursor ISO (PMID:26370502), (PMID:28073925), (PMID:28541286), (PMID:28743268)
(MGI:MGI:5905514|PMID:28073925), (MGI:MGI:6274951|PMID:27789271)
HPA
UniProt
PMID:26370502, PMID:27789271, PMID:28073925, PMID:28541286, PMID:28743268 GO_REF:0000052, MGI:MGI:5905514, MGI:MGI:6274951 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377
JBrowse link
G Gusb glucuronidase beta ISO (MGI:MGI:53945|PMID:4841576), (MGI:MGI:6155546|PMID:29514215) RGD
MGI
PMID:4841576, PMID:8702598, PMID:29514215 MGI:MGI:53945, MGI:MGI:6155546, RGD:1625498 NCBI chrNW_004955456:8,377,161...8,392,298
Ensembl chrNW_004955456:8,378,654...8,392,252
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO (PMID:15998323) UniProtKB PMID:15998323 NCBI chrNW_004955422:28,934,512...28,986,998
Ensembl chrNW_004955422:28,932,653...28,986,998
JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:3033879|PMID:11854359) MGI PMID:9645704, PMID:11854359 MGI:MGI:1271008, MGI:MGI:3033879 NCBI chrNW_004955450:4,790,342...4,806,862 JBrowse link
G Hexb hexosaminidase subunit beta ISO (MGI:MGI:3033879|PMID:11854359), (MGI:MGI:6155546|PMID:29514215) RGD
MGI
PMID:8702598, PMID:9041125, PMID:11854359, PMID:29514215 MGI:MGI:3033879, MGI:MGI:6155546, RGD:1599437, RGD:1625498 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312
JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate ISO HPA GO_REF:0000052 NCBI chrNW_004955506:1,405,543...1,418,095
Ensembl chrNW_004955506:1,405,543...1,418,095
JBrowse link
G Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ISO (PMID:12663659) UniProtKB PMID:12663659 NCBI chrNW_004955455:1,048,946...1,076,097
Ensembl chrNW_004955455:1,049,992...1,073,950
JBrowse link
G Hpse heparanase ISO (PMID:15126626) UniProtKB PMID:15126626 NCBI chrNW_004955474:6,367,467...6,394,395
Ensembl chrNW_004955474:6,367,467...6,394,395
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:23880665 RGD:10059327 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Hyal1 hyaluronidase 1 ISO (PMID:16600643), (PMID:20572808) UniProtKB PMID:16600643, PMID:20572808 NCBI chrNW_004955532:2,113,016...2,116,093
Ensembl chrNW_004955532:2,112,771...2,115,952
JBrowse link
G Hyal2 hyaluronidase 2 ISO (PMID:16600643), (PMID:9712871) UniProtKB PMID:9712871, PMID:16600643 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Hyal3 hyaluronidase 3 ISO (PMID:16600643) UniProtKB PMID:16600643 NCBI chrNW_004955532:2,107,019...2,112,356
Ensembl chrNW_004955532:2,106,565...2,108,892
JBrowse link
G Ids iduronate 2-sulfatase ISO (PMID:10838181)
(MGI:MGI:6368061|PMID:15149955)
UniProt PMID:10838181, PMID:15149955 MGI:MGI:6368061 NCBI chrNW_004955498:1,863,002...1,886,720 JBrowse link
G Idua alpha-L-iduronidase ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004955514:474,830...488,007
Ensembl chrNW_004955514:475,731...488,007
JBrowse link
G Ifi30 IFI30 lysosomal thiol reductase ISO (PMID:10639150)
(MGI:MGI:2153425|PMID:11701933), (MGI:MGI:5009354|PMID:20538950)
UniProtKB
MGI
PMID:10639150, PMID:11701933, PMID:20538950 MGI:MGI:2153425, MGI:MGI:5009354 NCBI chrNW_004955524:3,229,024...3,230,955
Ensembl chrNW_004955524:3,229,257...3,231,825
JBrowse link
G Irgm immunity related GTPase M ISO (MGI:MGI:4430426|PMID:20072621) UniProtKB PMID:20072621 MGI:MGI:4430426 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Itm2c integral membrane protein 2C ISO (PMID:14592447)
(MGI:MGI:4821078|PMID:14592447)
UniProtKB PMID:14592447 MGI:MGI:4821078 NCBI chrNW_004955453:4,546,736...4,557,649
Ensembl chrNW_004955453:4,543,476...4,557,757
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 ISO (PMID:21957902) BHF-UCL PMID:21957902 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
G Klhl22 kelch like family member 22 colocalizes_with ISO (PMID:29769719) UniProtKB PMID:29769719 NCBI chrNW_004955442:19,010,971...19,051,300 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 colocalizes_with ISO (MGI:MGI:2182212|PMID:11486041), (MGI:MGI:2673073|PMID:12925704), (MGI:MGI:2687086|PMID:14643301), (MGI:MGI:3033879|PMID:11854359), (MGI:MGI:3037131|PMID:15006695), (MGI:MGI:3054306|PMID:15294975), (MGI:MGI:3527911|PMID:15588329), (MGI:MGI:3575390|PMID:14627652), (MGI:MGI:3615690|PMID:16415873), (MGI:MGI:3654230|PMID:16542649), (MGI:MGI:3706740|PMID:10787428), (MGI:MGI:3790551|PMID:18477453), (MGI:MGI:5505712|PMID:23926254), (MGI:MGI:5515840|PMID:24035762), (MGI:MGI:5520108|PMID:24029230), (MGI:MGI:5806548|PMID:26965651), (MGI:MGI:5881894|PMID:26432893)
(PMID:15613468)
(PMID:15052268), (PMID:15292400), (PMID:15613468), (PMID:16542649), (PMID:22792322), (PMID:23704327)
PMID:15469932
MGI
UniProtKB
UniProt
PMID:10787428, PMID:11486041, PMID:11854359, PMID:12925704, PMID:14627652, PMID:14643301, PMID:15006695, PMID:15052268, PMID:15292400, PMID:15294975, PMID:15469932, PMID:15588329, PMID:15613468, PMID:16415873, PMID:16542649, PMID:18477453, PMID:22792322, PMID:23704327, PMID:23926254, PMID:24029230, PMID:24035762, PMID:26432893, PMID:26965651 MGI:MGI:2182212, MGI:MGI:2673073, MGI:MGI:2687086, MGI:MGI:3033879, MGI:MGI:3037131, MGI:MGI:3054306, MGI:MGI:3527911, MGI:MGI:3575390, MGI:MGI:3615690, MGI:MGI:3654230, MGI:MGI:3706740, MGI:MGI:3790551, MGI:MGI:5505712, MGI:MGI:5515840, MGI:MGI:5520108, MGI:MGI:5806548, MGI:MGI:5881894, RGD:15090831 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (MGI:MGI:2673081|PMID:12775715), (MGI:MGI:2679144|PMID:14557411), (MGI:MGI:3604923|PMID:16093322), (MGI:MGI:3619505|PMID:16399794), (MGI:MGI:3850356|PMID:19549681), (MGI:MGI:5565633|PMID:24334765)
(PMID:12536145), (PMID:15229288), (PMID:19535332), (PMID:28743268)
MGI
RGD
PMID:11082038, PMID:12536145, PMID:12775715, PMID:14557411, PMID:15229288, PMID:16093322, PMID:16399794, PMID:19337031, PMID:19535332, PMID:19549681, PMID:24334765, PMID:28743268 MGI:MGI:2673081, MGI:MGI:2679144, MGI:MGI:3604923, MGI:MGI:3619505, MGI:MGI:3850356, MGI:MGI:5565633, RGD:1581607, RGD:4892338 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Lamp5 lysosomal associated membrane protein family member 5 ISO (MGI:MGI:5751042|PMID:25592972) MGI PMID:25592972 MGI:MGI:5751042 NCBI chrNW_004955415:19,488,533...19,502,599
Ensembl chrNW_004955415:19,488,527...19,502,640
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISO (PMID:20544018) UniProtKB PMID:20544018 NCBI chrNW_004955414:19,228,615...19,235,523
Ensembl chrNW_004955414:19,228,615...19,247,765
JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 ISO (PMID:22980980) UniProtKB PMID:22980980 NCBI chrNW_004955573:649,604...653,185
Ensembl chrNW_004955573:645,587...694,661
JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ISO (PMID:22980980) UniProtKB PMID:22980980 NCBI chrNW_004955435:13,896,320...13,900,742
Ensembl chrNW_004955435:13,896,320...13,900,754
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 ISO PMID:8661146
(MGI:MGI:3803048|PMID:18619870), (MGI:MGI:4460047|PMID:20519653)
(PMID:8661146)
RGD
ARUK-UCL
PMID:8661146, PMID:11295227, PMID:18619870, PMID:20519653 MGI:MGI:3803048, MGI:MGI:4460047, RGD:39458012, RGD:633121 NCBI chrNW_004955452:9,335,481...9,358,177
Ensembl chrNW_004955452:9,334,587...9,358,444
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 ISO (PMID:22424946) CAFA PMID:22424946 NCBI chrNW_004955415:7,923,292...7,983,757
Ensembl chrNW_004955415:7,923,059...7,983,757
JBrowse link
G Ldlr low density lipoprotein receptor ISO (PMID:15166224), (PMID:17461796)
(MGI:MGI:3619161|PMID:11092755)
BHF-UCL
MGI
PMID:11092755, PMID:15166224, PMID:17461796 MGI:MGI:3619161 NCBI chrNW_004955495:2,114,702...2,135,584
Ensembl chrNW_004955495:2,114,434...2,138,056
JBrowse link
G Lgmn legumain ISO (MGI:MGI:1303164|PMID:9742219) UniProtKB
UniProt
PMID:9742219 MGI:MGI:1303164, RGD:704328 NCBI chrNW_004955438:14,905,856...14,938,722
Ensembl chrNW_004955438:14,905,856...14,939,256
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO RGD PMID:10847593 RGD:2292601 NCBI chrNW_004955441:15,205,883...15,263,617 JBrowse link
G Lipa lipase A, lysosomal acid type ISO PMID:4062953 UniProt
RGD
PMID:4062953, PMID:10419291, PMID:11687729 RGD:1600623, RGD:1626385, RGD:25671400 NCBI chrNW_004955425:3,718,291...3,755,942
Ensembl chrNW_004955425:3,718,206...3,756,142
JBrowse link
G Lmbrd1 LMBR1 domain containing 1 ISO (MGI:MGI:5543853|PMID:24078630) MGI PMID:24078630 MGI:MGI:5543853 NCBI chrNW_004955488:4,774,835...4,879,401
Ensembl chrNW_004955488:4,772,504...4,879,423
JBrowse link
G LOC102008505 chromosome unknown open reading frame, human C12orf66 ISO HPA GO_REF:0000052 NCBI chrNW_004955458:11,027,550...11,048,563
Ensembl chrNW_004955458:11,025,291...11,048,567
JBrowse link
G LOC102016503 cytochrome b ascorbate-dependent protein 3 ISO (MGI:MGI:3695337|PMID:16996694) MGI PMID:16996694 MGI:MGI:3695337 NCBI chrNW_004955511:6,191,644...6,200,099
Ensembl chrNW_004955511:6,191,645...6,200,099
JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain ISO (PMID:8890155) MGI PMID:8890155 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802
JBrowse link
G LOC102023521 HLA class II histocompatibility antigen, DM beta chain ISO (MGI:MGI:3033879|PMID:11854359) MGI PMID:11854359 MGI:MGI:3033879 NCBI chrNW_004955437:1,544,906...1,551,412 JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:MGI:3033877|PMID:7584146), (MGI:MGI:3033879|PMID:11854359) MGI PMID:7584146, PMID:11854359 MGI:MGI:3033877, MGI:MGI:3033879 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162
JBrowse link
G Lrba LPS responsive beige-like anchor protein ISO (MGI:MGI:1932145|PMID:11254716) UniProtKB PMID:11254716 MGI:MGI:1932145 NCBI chrNW_004955471:5,052,535...5,649,696
Ensembl chrNW_004955471:5,053,487...5,649,476
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (MGI:MGI:5572872|PMID:17120249) UniProtKB PMID:17120249 MGI:MGI:5572872 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Man2b1 mannosidase alpha class 2B member 1 ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004955415:31,743,813...31,770,560 JBrowse link
G Man2b2 mannosidase alpha class 2B member 2 ISO RGD PMID:8110182 RGD:2316679 NCBI chrNW_004955514:3,743,265...3,771,970
Ensembl chrNW_004955514:3,743,417...3,771,970
JBrowse link
G Manba mannosidase beta ISO RGD PMID:8702598 RGD:1625498 NCBI chrNW_004955496:5,744,374...5,837,974
Ensembl chrNW_004955496:5,744,250...5,841,293
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (PMID:14722266) UniProtKB PMID:14722266 NCBI chrNW_004955403:41,187,039...41,484,734
Ensembl chrNW_004955403:41,060,246...41,484,734
JBrowse link
G Marchf8 membrane associated ring-CH-type finger 8 ISO (PMID:14722266) UniProtKB PMID:14722266 NCBI chrNW_004955546:2,558,027...2,641,108 JBrowse link
G Mcoln1 mucolipin 1 ISO (PMID:21224396) UniProtKB PMID:21224396 NCBI chrNW_004955563:1,703,408...1,712,908
Ensembl chrNW_004955563:1,703,416...1,745,996
JBrowse link
G Mfhas1 malignant fibrous histiocytoma amplified sequence 1 NOT ISO (PMID:24286120) UniProtKB PMID:24286120 NCBI chrNW_004955463:4,900,115...4,993,793
Ensembl chrNW_004955463:4,900,060...4,993,793
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 ISO (MGI:MGI:4836318|PMID:20826447), (MGI:MGI:5575728|PMID:24423645) MGI PMID:20826447, PMID:24423645 MGI:MGI:4836318, MGI:MGI:5575728 NCBI chrNW_004955428:13,519,285...13,548,007
Ensembl chrNW_004955428:13,519,277...13,544,695
JBrowse link
G Mlc1 modulator of VRAC current 1 ISO PMID:19931615 UniProt PMID:19931615 RGD:2326037 NCBI chrNW_004955413:33,120,426...33,142,149
Ensembl chrNW_004955413:33,119,218...33,142,149
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO perivascular cells of the bone growth plate erosion zone RGD PMID:14751562 RGD:2296059 NCBI chrNW_004955412:6,106,994...6,118,760
Ensembl chrNW_004955412:6,106,994...6,118,760
JBrowse link
G Mpz myelin protein zero ISO RGD PMID:16788992 RGD:9685788 NCBI chrNW_004955468:13,041,911...13,047,026
Ensembl chrNW_004955468:13,041,011...13,047,284
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:20381137), (PMID:25936802), (PMID:29750193)
(PMID:22424946)
UniProt
CAFA
PMID:20381137, PMID:22424946, PMID:25936802, PMID:29750193 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Myo5a myosin VA colocalizes_with ISO (PMID:24006491) UniProtKB PMID:24006491 NCBI chrNW_004955409:2,409,503...2,530,539
Ensembl chrNW_004955409:2,428,815...2,530,012
JBrowse link
G Naaa N-acylethanolamine acid amidase ISO (MGI:MGI:6155546|PMID:29514215)
(PMID:15655246)
MGI
UniProt
PMID:15655246, PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955433:630,627...674,675
Ensembl chrNW_004955433:630,483...674,675
JBrowse link
G Napsa napsin A aspartic peptidase ISO (PMID:14766755)
(MGI:MGI:5306315|PMID:14766755)
UniProtKB PMID:14766755 MGI:MGI:5306315 NCBI chrNW_004955559:769,555...777,970
Ensembl chrNW_004955559:769,477...778,543
JBrowse link
G Ncstn nicastrin ISO (MGI:MGI:5751042|PMID:25592972) MGI PMID:25592972 MGI:MGI:5751042 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033
JBrowse link
G Neu1 neuraminidase 1 ISO (MGI:MGI:2181233|PMID:9425240)
(PMID:25153125), (PMID:8985184)
MGI
RGD
UniProtKB
PMID:2393382, PMID:8985184, PMID:9425240, PMID:25153125 MGI:MGI:2181233, RGD:7242745 NCBI chrNW_004955437:378,708...383,076
Ensembl chrNW_004955437:378,708...383,085
JBrowse link
G Neu4 neuraminidase 4 NOT ISO (PMID:14962670)
(PMID:15213228)
UniProtKB PMID:14962670, PMID:15213228 NCBI chrNW_004955542:66,214...70,456
Ensembl chrNW_004955542:66,174...71,058
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (MGI:MGI:3706740|PMID:10787428), (MGI:MGI:5292275|PMID:21896731), (MGI:MGI:5305553|PMID:22065762) MGI PMID:10787428, PMID:21896731, PMID:22065762 MGI:MGI:3706740, MGI:MGI:5292275, MGI:MGI:5305553 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 ISO (MGI:MGI:6155546|PMID:29514215)
(PMID:11125141), (PMID:15937921)
MGI
HGNC
PMID:11125141, PMID:15937921, PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955523:1,010,976...1,021,048
Ensembl chrNW_004955523:1,010,976...1,021,144
JBrowse link
G P2ry2 purinergic receptor P2Y2 colocalizes_with ISO RGD PMID:15924261 RGD:2316682 NCBI chrNW_004955414:18,248,082...18,271,047
Ensembl chrNW_004955414:18,248,082...18,260,450
JBrowse link
G Pax2 paired box 2 ISO RGD PMID:15149326 RGD:2316747 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:17461796), (PMID:18039658) UniProtKB PMID:17461796, PMID:18039658 NCBI chrNW_004955464:4,424,583...4,439,805
Ensembl chrNW_004955464:4,425,435...4,439,842
JBrowse link
G Pcyox1 prenylcysteine oxidase 1 ISO (PMID:10585463)
(MGI:MGI:6155546|PMID:29514215)
BHF-UCL
MGI
PMID:10585463, PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955424:14,854,755...14,865,920
Ensembl chrNW_004955424:14,855,106...14,865,840
JBrowse link
G Pla2g15 phospholipase A2 group XV ISO (MGI:MGI:6155546|PMID:29514215)
(PMID:11790796)
MGI
UniProtKB
PMID:11790796, PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955484:8,386,274...8,412,952
Ensembl chrNW_004955484:8,386,274...8,412,952
JBrowse link
G Plbd2 phospholipase B domain containing 2 ISO (MGI:MGI:3689664|PMID:17007843), (MGI:MGI:3708437|PMID:17105447) MGI PMID:17007843, PMID:17105447 MGI:MGI:3689664, MGI:MGI:3708437 NCBI chrNW_004955482:9,630,300...9,643,212
Ensembl chrNW_004955482:9,630,187...9,643,431
JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 ISO (PMID:22115783)
(MGI:MGI:3611133|PMID:16188880)
BHF-UCL
MGI
PMID:16188880, PMID:22115783 MGI:MGI:3611133 NCBI chrNW_004955468:7,934,024...7,943,499
Ensembl chrNW_004955468:7,934,024...7,943,499
JBrowse link
G Pon2 paraoxonase 2 ISO RGD PMID:17916643 RGD:2313493 NCBI chrNW_004955432:11,988,009...12,020,702
Ensembl chrNW_004955432:11,987,919...12,020,740
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 ISO (PMID:11020216), (PMID:19941651), (PMID:8895569)
(MGI:MGI:3608104|PMID:16242638)
(MGI:MGI:1276629|PMID:9685319), (MGI:MGI:5795821|PMID:19941651)
UniProtKB
MGI
RGD
PMID:8895569, PMID:9685319, PMID:10327204, PMID:11020216, PMID:16242638, PMID:19941651 MGI:MGI:1276629, MGI:MGI:3608104, MGI:MGI:5795821, RGD:1581146 NCBI chrNW_004955452:17,518,345...17,549,112
Ensembl chrNW_004955452:17,529,115...17,549,664
JBrowse link
G Prcp prolylcarboxypeptidase ISO (MGI:MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955414:9,631,223...9,700,537
Ensembl chrNW_004955414:9,631,223...9,700,184
JBrowse link
G Prss16 serine protease 16 ISO (PMID:10527559)
(MGI:MGI:5306331|PMID:10527559)
UniProtKB PMID:10527559 MGI:MGI:5306331 NCBI chrNW_004955465:13,152,701...13,158,411
Ensembl chrNW_004955465:13,152,701...13,158,247
JBrowse link
G Psap prosaposin ISO (PMID:22431521), (PMID:26370502), (PMID:28541286)
(MGI:MGI:2667786|PMID:12867159), (MGI:MGI:4368056|PMID:19732768), (MGI:MGI:6155546|PMID:29514215)
UniProt
MGI
PMID:12867159, PMID:19732768, PMID:22431521, PMID:26370502, PMID:28541286, PMID:29514215 MGI:MGI:2667786, MGI:MGI:4368056, MGI:MGI:6155546 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Rab12 RAB12, member RAS oncogene family ISO (MGI:MGI:5448516|PMID:21718402) UniProtKB PMID:21718402 MGI:MGI:5448516 NCBI chrNW_004955402:3,102,709...3,109,701
Ensembl chrNW_004955402:3,103,708...3,110,701
JBrowse link
G Rab14 RAB14, member RAS oncogene family ISO PMID:15004230 UniProt PMID:15004230 RGD:8554557 NCBI chrNW_004955419:6,790,110...6,812,870
Ensembl chrNW_004955419:6,790,707...6,812,870
JBrowse link
G Rab27a RAB27A, member RAS oncogene family ISO (PMID:15548590) UniProtKB PMID:15548590 NCBI chrNW_004955409:588,725...621,874
Ensembl chrNW_004955409:588,254...621,874
JBrowse link
G Rab38 RAB38, member RAS oncogene family ISO (PMID:25767741) ParkinsonsUK-UCL PMID:25767741 NCBI chrNW_004955414:5,158,860...5,214,108
Ensembl chrNW_004955414:5,158,261...5,215,698
JBrowse link
G Rab7a RAB7A, member RAS oncogene family colocalizes_with ISO (PMID:18272684)
(MGI:MGI:6356112|PMID:29712939)
(PMID:15078902)
BHF-UCL
MGI
HPA
PMID:15078902, PMID:18272684, PMID:29712939 GO_REF:0000052, MGI:MGI:6356112 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Rab7b RAB7B, member RAS oncogene family ISO (MGI:MGI:3834524|PMID:17395780), (MGI:MGI:4355098|PMID:19587007)
(PMID:20375062)
UniProtKB PMID:17395780, PMID:19587007, PMID:20375062 MGI:MGI:3834524, MGI:MGI:4355098 NCBI chrNW_004955406:41,615,302...41,638,157
Ensembl chrNW_004955406:41,615,302...41,638,151
JBrowse link
G Rab9a RAB9A, member RAS oncogene family ISO (PMID:15078902) MGI PMID:15078902 NCBI chrNW_004955519:4,489,159...4,496,089
Ensembl chrNW_004955519:4,489,159...4,496,089
JBrowse link
G Ramp3 receptor activity modifying protein 3 colocalizes_with ISO (PMID:15613468) UniProtKB PMID:15613468 NCBI chrNW_004955456:7,159,845...7,168,718
Ensembl chrNW_004955456:7,159,845...7,168,792
JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 ISO (PMID:28561066) UniProt PMID:28561066 NCBI chrNW_004955454:12,201,566...12,257,383
Ensembl chrNW_004955454:12,200,750...12,257,389
JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase NOT ISO (PMID:18450452) UniProtKB PMID:18450452 NCBI chrNW_004955481:9,718,369...9,788,048 JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:18272684) BHF-UCL PMID:18272684 NCBI chrNW_004955481:1,531,175...1,534,794
Ensembl chrNW_004955481:1,531,574...1,534,443
JBrowse link
G Rnaset2 ribonuclease T2 ISO (PMID:16620762) UniProtKB PMID:16620762 NCBI chrNW_004955439:15,098,210...15,122,015 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:21203937) UniProtKB PMID:21203937 NCBI chrNW_004955402:45,774,565...45,846,649
Ensembl chrNW_004955402:45,774,565...45,846,518
JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 ISO (PMID:20381137)
(PMID:22424946)
HPA
CAFA
PMID:20381137, PMID:22424946 GO_REF:0000052 NCBI chrNW_004955506:2,009,422...2,401,775
Ensembl chrNW_004955506:2,008,044...2,401,775
JBrowse link
G Rraga Ras related GTP binding A ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004955434:21,509,528...21,510,885
Ensembl chrNW_004955434:21,509,529...21,510,470
JBrowse link
G Rragb Ras related GTP binding B ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004955475:2,662,969...2,692,253
Ensembl chrNW_004955475:2,662,868...2,696,364
JBrowse link
G Rragc Ras related GTP binding C ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004955452:16,469,426...16,486,336
Ensembl chrNW_004955452:16,466,453...16,486,336
JBrowse link
G Rragd Ras related GTP binding D ISO (PMID:20381137) UniProtKB PMID:20381137 NCBI chrNW_004955411:16,111,931...16,155,662
Ensembl chrNW_004955411:16,114,755...16,138,433
JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460) UniProtKB PMID:15146460 NCBI chrNW_004955506:2,701,901...2,713,431
Ensembl chrNW_004955506:2,701,905...2,711,073
JBrowse link
G Siae sialic acid acetylesterase ISO (MGI:MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955412:25,704,024...25,741,646
Ensembl chrNW_004955412:25,703,591...25,792,252
JBrowse link
G Sidt2 SID1 transmembrane family member 2 ISO (MGI:MGI:5908462|PMID:28724756), (MGI:MGI:5908512|PMID:27046251), (MGI:MGI:5909194|PMID:28277980)
(PMID:28277980)
UniProtKB PMID:27046251, PMID:28277980, PMID:28724756 MGI:MGI:5908462, MGI:MGI:5908512, MGI:MGI:5909194 NCBI chrNW_004955412:18,505,453...18,521,667
Ensembl chrNW_004955412:18,505,453...18,522,082
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 NOT ISO (PMID:21359217) AgBase PMID:21359217 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO (MGI:MGI:3695780|PMID:16905747), (MGI:MGI:3758128|PMID:17620357) MGI PMID:16905747, PMID:17620357 MGI:MGI:3695780, MGI:MGI:3758128 NCBI chrNW_004955453:14,980,562...14,995,118
Ensembl chrNW_004955453:14,980,562...14,995,608
JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO RGD PMID:15516337 RGD:1624225 NCBI chrNW_004955493:8,693,933...8,719,250
Ensembl chrNW_004955493:8,693,679...8,719,250
JBrowse link
G Slc2a13 solute carrier family 2 member 13 NOT ISO (MGI:MGI:6202504|PMID:14749729) ARUK-UCL PMID:14749729 MGI:MGI:6202504 NCBI chrNW_004955505:395,380...664,272
Ensembl chrNW_004955505:396,744...662,738
JBrowse link
G Slc35f6 solute carrier family 35 member F6 ISO (MGI:MGI:3692368|PMID:16367739) MGI PMID:16367739 MGI:MGI:3692368 NCBI chrNW_004955469:8,774,225...8,787,549
Ensembl chrNW_004955469:8,773,989...8,787,549
JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:25561175), (PMID:25567906) UniProtKB PMID:25561175, PMID:25567906 NCBI chrNW_004955446:12,042,848...12,132,211
Ensembl chrNW_004955446:12,042,313...12,132,211
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 ISO (PMID:18815062), (PMID:20956541), (PMID:27659707) UniProtKB PMID:18815062, PMID:20956541, PMID:27659707 NCBI chrNW_004955414:22,117,929...22,121,744
Ensembl chrNW_004955414:22,117,930...22,121,744
JBrowse link
G Snx1 sorting nexin 1 ISO HPA GO_REF:0000052 NCBI chrNW_004955450:11,266,712...11,306,014
Ensembl chrNW_004955450:11,266,712...11,305,930
JBrowse link
G Snx14 sorting nexin 14 ISO (PMID:25848753) UniProtKB PMID:25848753 NCBI chrNW_004955411:12,967,980...13,048,839
Ensembl chrNW_004955411:12,969,114...13,048,836
JBrowse link
G Snx2 sorting nexin 2 ISO HPA GO_REF:0000052 NCBI chrNW_004955521:870,469...934,112 JBrowse link
G Snx6 sorting nexin 6 ISO HPA GO_REF:0000052 NCBI chrNW_004955409:26,323,940...26,353,675
Ensembl chrNW_004955409:26,319,951...26,352,994
JBrowse link
G Sod1 superoxide dismutase 1 ISO PMID:7096343 CACAO PMID:7096343 RGD:10047299 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Sort1 sortilin 1 ISO (PMID:28541286) UniProt PMID:28541286 NCBI chrNW_004955435:12,725,952...12,819,280
Ensembl chrNW_004955435:12,730,270...12,819,029
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:20605918) UniProtKB PMID:20605918 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Stx7 syntaxin 7 ISO (PMID:18980942) UniProtKB PMID:18980942 NCBI chrNW_004955436:12,928,274...12,975,745 JBrowse link
G Syt11 synaptotagmin 11 ISO (MGI:MGI:5468041|PMID:23303671), (MGI:MGI:5788615|PMID:26450452), (MGI:MGI:5913303|PMID:28686317) ParkinsonsUK-UCL PMID:23303671, PMID:26450452, PMID:28686317 MGI:MGI:5468041, MGI:MGI:5788615, MGI:MGI:5913303 NCBI chrNW_004955545:2,054,720...2,074,526
Ensembl chrNW_004955545:2,054,721...2,074,526
JBrowse link
G Syt7 synaptotagmin 7 ISO (MGI:MGI:2673073|PMID:12925704), (MGI:MGI:4849340|PMID:21041449), (MGI:MGI:5645834|PMID:25860611)
PMID:11511344
PMID:10725327
UniProtKB
UniProt
PMID:10725327, PMID:11511344, PMID:12925704, PMID:21041449, PMID:25860611 MGI:MGI:2673073, MGI:MGI:4849340, MGI:MGI:5645834, RGD:11041027, RGD:2311145 NCBI chrNW_004955511:6,051,392...6,093,651
Ensembl chrNW_004955511:6,051,386...6,093,651
JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:MGI:2664004|PMID:12672822), (MGI:MGI:3850356|PMID:19549681) MGI PMID:12672822, PMID:19549681 MGI:MGI:2664004, MGI:MGI:3850356 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
G Tlr7 toll like receptor 7 ISO (MGI:MGI:3776596|PMID:18305481) UniProtKB PMID:18305481 MGI:MGI:3776596 NCBI chrNW_004955544:424,897...443,562
Ensembl chrNW_004955544:424,850...443,564
JBrowse link
G Tlr9 toll like receptor 9 ISO (MGI:MGI:3776596|PMID:18305481), (MGI:MGI:3826712|PMID:18820679) UniProtKB PMID:18305481, PMID:18820679 MGI:MGI:3776596, MGI:MGI:3826712 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Tmem106b transmembrane protein 106B ISO (MGI:MGI:5588048|PMID:25066864), (MGI:MGI:5701557|PMID:26370502) MGI
HPA
PMID:25066864, PMID:26370502 GO_REF:0000052, MGI:MGI:5588048, MGI:MGI:5701557 NCBI chrNW_004955432:18,619,418...18,644,876
Ensembl chrNW_004955432:18,619,413...18,639,151
JBrowse link
G Tmem175 transmembrane protein 175 ISO (PMID:26317472) UniProtKB PMID:26317472 NCBI chrNW_004955514:434,283...453,239
Ensembl chrNW_004955514:434,285...453,239
JBrowse link
G Tmem192 transmembrane protein 192 ISO (PMID:22736246) HPA PMID:22736246 GO_REF:0000052 NCBI chrNW_004955403:40,202,180...40,211,747
Ensembl chrNW_004955403:40,199,850...40,212,765
JBrowse link
G Tmem25 transmembrane protein 25 ISO (MGI:MGI:6370252|PMID:31424425) UniProt PMID:31424425 MGI:MGI:6370252 NCBI chrNW_004955412:19,690,048...19,695,258
Ensembl chrNW_004955412:19,690,048...19,695,258
JBrowse link
G Tmem59 transmembrane protein 59 ISO (PMID:23376921) UniProtKB PMID:23376921 NCBI chrNW_004955464:5,193,173...5,222,089
Ensembl chrNW_004955464:5,193,272...5,222,974
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:12359240) UniProtKB PMID:12359240 NCBI chrNW_004955406:37,279,885...37,299,196
Ensembl chrNW_004955406:37,279,694...37,314,251
JBrowse link
G Tmem97 transmembrane protein 97 ISO (PMID:19583955) UniProtKB PMID:19583955 NCBI chrNW_004955481:4,807,850...4,817,006
Ensembl chrNW_004955481:4,807,850...4,817,006
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:22012985)
(MGI:MGI:5285159|PMID:20495006)
ParkinsonsUK-UCL
UniProtKB
PMID:20495006, PMID:22012985 MGI:MGI:5285159 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
G Tpp1 tripeptidyl peptidase 1 ISO (PMID:15317752), (PMID:17237713), (PMID:19941651)
(MGI:MGI:5795821|PMID:19941651)
(PMID:9295267)
UniProt
UniProtKB
PMID:9295267, PMID:15317752, PMID:17237713, PMID:19941651 MGI:MGI:5795821 NCBI chrNW_004955414:22,324,847...22,330,912
Ensembl chrNW_004955414:22,324,856...22,330,912
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (PMID:27068538) UniProtKB PMID:27068538 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Tsc2 TSC complex subunit 2 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362
JBrowse link
G Unc13d unc-13 homolog D ISO (PMID:15548590) UniProtKB PMID:15548590 NCBI chrNW_004955506:6,407,073...6,423,406
Ensembl chrNW_004955506:6,407,723...6,423,406
JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator ISO (MGI:MGI:3776596|PMID:18305481) UniProtKB PMID:18305481 MGI:MGI:3776596 NCBI chrNW_004955422:17,814,174...17,823,945
Ensembl chrNW_004955422:17,814,079...17,824,190
JBrowse link
G Uvrag UV radiation resistance associated ISO (PMID:19270696) UniProtKB PMID:19270696 NCBI chrNW_004955414:15,733,116...16,043,555
Ensembl chrNW_004955414:15,731,519...16,043,555
JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (MGI:MGI:5805578|PMID:27628032) UniProtKB PMID:27628032 MGI:MGI:5805578 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vma21 vacuolar ATPase assembly factor VMA21 ISO LIFEdb GO_REF:0000054 NCBI chrNW_004955498:6,874,980...6,887,561
Ensembl chrNW_004955498:6,874,776...6,887,658
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes colocalizes_with ISO (PMID:21148287)
(PMID:11382755)
UniProtKB PMID:11382755, PMID:21148287 NCBI chrNW_004955412:20,161,520...20,190,141
Ensembl chrNW_004955412:20,177,623...20,190,141
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes ISO (PMID:11382755) UniProtKB PMID:11382755 NCBI chrNW_004955415:13,791,611...13,813,500
Ensembl chrNW_004955415:13,791,611...13,813,500
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes ISO (PMID:11382755) UniProtKB PMID:11382755 NCBI chrNW_004955416:7,772,653...7,780,408
Ensembl chrNW_004955416:7,772,653...7,782,542
JBrowse link
G Vps26a VPS26, retromer complex component A ISO HPA GO_REF:0000052 NCBI chrNW_004955437:21,911,111...21,944,888
Ensembl chrNW_004955437:21,910,680...21,944,428
JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes ISO (MGI:MGI:5805578|PMID:27628032) UniProtKB PMID:27628032 MGI:MGI:5805578 NCBI chrNW_004955482:6,333,282...6,352,369 JBrowse link
G Vps33b VPS33B late endosome and lysosome associated ISO (PMID:15052268) UniProtKB PMID:15052268 NCBI chrNW_004955416:15,049,849...15,071,108 JBrowse link
G Vps35 VPS35 retromer complex component ISO HPA GO_REF:0000052 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160
JBrowse link
G Vps36 vacuolar protein sorting 36 homolog ISO (MGI:MGI:3582124|PMID:15755741) MGI PMID:15755741 MGI:MGI:3582124 NCBI chrNW_004955431:5,443,050...5,466,577
Ensembl chrNW_004955431:5,443,050...5,463,366
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:10637304) UniProtKB PMID:10637304 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
G Wdr45b WD repeat domain 45B ISO (PMID:28561066) UniProt PMID:28561066 NCBI chrNW_004955506:515,364...556,507
Ensembl chrNW_004955506:515,327...560,075
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (MGI:MGI:5499037|PMID:23776219) MGI PMID:23776219 MGI:MGI:5499037 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736
JBrowse link
autolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:3690270|PMID:16714284) UniProt PMID:16714284 MGI:MGI:3690270 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
G Fth1 ferritin heavy chain 1 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955511:5,772,374...5,773,224 JBrowse link
G Ftl ferritin light chain ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955559:1,691,722...1,693,381 JBrowse link
G Irgm immunity related GTPase M ISO (MGI:MGI:3656111|PMID:16888103) UniProtKB PMID:16888103 MGI:MGI:3656111 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:MGI:5749311 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:19640926) ParkinsonsUK-UCL PMID:19640926 NCBI chrNW_004955505:84,324...216,923
Ensembl chrNW_004955505:81,796...216,923
JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955422:26,774,466...26,776,024
Ensembl chrNW_004955422:26,774,922...26,775,884
JBrowse link
G Map1lc3b microtubule associated protein 1 light chain 3 beta ISO (MGI:MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:MGI:5749311 NCBI chrNW_004955541:1,852,388...1,868,194 JBrowse link
G Ncoa4 nuclear receptor coactivator 4 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955556:392,412...413,643
Ensembl chrNW_004955556:392,398...412,166
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 ISO (PMID:25327288) MGI PMID:25327288 NCBI chrNW_004955402:28,081,150...28,195,305
Ensembl chrNW_004955402:28,081,098...28,196,252
JBrowse link
G Sqstm1 sequestosome 1 ISO (MGI:MGI:5749311|PMID:26284655)
(PMID:19640926)
MGI
ParkinsonsUK-UCL
PMID:19640926, PMID:26284655 MGI:MGI:5749311 NCBI chrNW_004955408:757,426...764,989
Ensembl chrNW_004955408:757,426...771,615
JBrowse link
azurophil granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa11 annexin A11 ISO (PMID:9188810) UniProtKB PMID:9188810 NCBI chrNW_004955437:13,119,782...13,161,196
Ensembl chrNW_004955437:13,119,782...13,161,536
JBrowse link
G Hexa hexosaminidase subunit alpha ISO (PMID:25645918) UniProtKB PMID:25645918 NCBI chrNW_004955450:4,790,342...4,806,862 JBrowse link
G Hexb hexosaminidase subunit beta ISO (PMID:25645918) UniProtKB PMID:25645918 NCBI chrNW_004955425:25,942,341...25,961,312
Ensembl chrNW_004955425:25,942,278...25,961,312
JBrowse link
G Mpo myeloperoxidase ISO (PMID:2981589) UniProtKB PMID:2981589 NCBI chrNW_004955451:4,743,744...4,753,358
Ensembl chrNW_004955451:4,743,744...4,753,358
JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:16387842 RGD:1580263 NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
JBrowse link
G Olfm4 olfactomedin 4 NOT ISO (PMID:23922742) UniProtKB PMID:23922742 NCBI chrNW_004955404:50,549,218...50,570,302
Ensembl chrNW_004955404:50,549,151...50,570,305
JBrowse link
G Snap23 synaptosome associated protein 23 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004955416:9,191,123...9,225,103
Ensembl chrNW_004955416:9,190,623...9,225,103
JBrowse link
G Stx3 syntaxin 3 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004955511:4,183,210...4,219,528
Ensembl chrNW_004955511:4,196,114...4,218,961
JBrowse link
G Stx7 syntaxin 7 ISO (PMID:20170677) UniProtKB PMID:20170677 NCBI chrNW_004955436:12,928,274...12,975,745 JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO (PMID:18588921) UniProtKB PMID:18588921 NCBI chrNW_004955563:1,617,621...1,624,441
Ensembl chrNW_004955563:1,617,621...1,624,441
JBrowse link
azurophil granule lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prss57 serine protease 57 ISO (PMID:23904161) UniProtKB PMID:23904161 NCBI chrNW_004955495:7,067,844...7,077,048 JBrowse link
azurophil granule membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp1 vesicle associated membrane protein 1 NOT ISO (PMID:11391393) UniProtKB PMID:11391393 NCBI chrNW_004955413:4,117,367...4,124,149
Ensembl chrNW_004955413:4,117,367...4,124,149
JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654
JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:16677249) UniProtKB PMID:16677249 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
chaperone-mediated autophagy translocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:8662539) ParkinsonsUK-UCL PMID:8662539 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
cytolytic granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:MGI:4430768|PMID:19915045) MGI PMID:19915045 MGI:MGI:4430768 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
G Prf1 perforin 1 ISO (PMID:9756476)
(MGI:MGI:4430768|PMID:19915045), (MGI:MGI:66009|PMID:8164737)
UniProtKB PMID:8164737, PMID:9756476, PMID:19915045 MGI:MGI:4430768, MGI:MGI:66009 NCBI chrNW_004955437:20,700,912...20,705,076
Ensembl chrNW_004955437:20,700,718...20,706,929
JBrowse link
G Rnf19b ring finger protein 19B ISO (MGI:MGI:4430768|PMID:19915045) MGI PMID:19915045 MGI:MGI:4430768 NCBI chrNW_004955452:11,179,268...11,190,594
Ensembl chrNW_004955452:11,179,603...11,190,593
JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO (PMID:19804848) UniProtKB PMID:19804848 NCBI chrNW_004955563:1,617,621...1,624,441
Ensembl chrNW_004955563:1,617,621...1,624,441
JBrowse link
cytoplasmic side of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004955413:9,309,766...9,399,378
Ensembl chrNW_004955413:9,309,861...9,399,378
JBrowse link
G Cdip1 cell death inducing p53 target 1 ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004955442:12,895,403...12,913,517
Ensembl chrNW_004955442:12,895,702...12,913,517
JBrowse link
G Gfap glial fibrillary acidic protein ISO PMID:20797626 ParkinsonsUK-UCL PMID:20797626 RGD:10412296 NCBI chrNW_004955451:17,695,835...17,703,894
Ensembl chrNW_004955451:17,695,835...17,703,268
JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:27582497) UniProtKB PMID:27582497 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437
JBrowse link
endolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Tlr9 toll like receptor 9 ISO (MGI:MGI:3828189|PMID:18931679)
(MGI:MGI:3826712|PMID:18820679)
(MGI:MGI:6274965|PMID:25917084)
UniProtKB
UniProt
PMID:18820679, PMID:18931679, PMID:25917084 MGI:MGI:3826712, MGI:MGI:3828189, MGI:MGI:6274965 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
endolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004955531:207,614...293,127
Ensembl chrNW_004955531:267,216...293,127
JBrowse link
extrinsic component of lysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO (MGI:MGI:5689086|PMID:23708524) GO_Central PMID:23708524 MGI:MGI:5689086 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
integral component of lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:26134396) ParkinsonsUK-UCL PMID:26134396 NCBI chrNW_004955527:1,805,854...1,823,623
Ensembl chrNW_004955527:1,806,009...1,823,344
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 ISO (PMID:28784760), (PMID:9927649) UniProtKB PMID:9927649, PMID:28784760 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (PMID:25238095), (PMID:29224352)
(MGI:MGI:6112943|PMID:29155995), (MGI:MGI:6278628|PMID:21277849)
UniProt PMID:21277849, PMID:25238095, PMID:29155995, PMID:29224352 MGI:MGI:6112943, MGI:MGI:6278628 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:29053970) UniProt PMID:29053970 NCBI chrNW_004955446:12,042,848...12,132,211
Ensembl chrNW_004955446:12,042,313...12,132,211
JBrowse link
G Slc46a3 solute carrier family 46 member 3 ISO (PMID:26631267) FlyBase PMID:26631267 NCBI chrNW_004955497:8,015,244...8,034,195
Ensembl chrNW_004955497:8,015,017...8,033,302
JBrowse link
lysosomal lumen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:15578272 RGD:2317835 NCBI chrNW_004955429:10,789,674...11,038,297
Ensembl chrNW_004955429:10,788,959...11,038,845
JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 ISO PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chrNW_004955514:5,273,810...5,294,925
Ensembl chrNW_004955514:5,273,810...5,295,710
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 ISO PMID:28874679 UniProt PMID:28874679 RGD:13432228 NCBI chrNW_004955408:26,664,884...26,724,949
Ensembl chrNW_004955408:26,664,537...26,724,949
JBrowse link
G Pld3 phospholipase D family member 3 ISO (PMID:30312375) UniProt PMID:30312375 NCBI chrNW_004955578:884,700...905,426
Ensembl chrNW_004955578:884,700...894,433
JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955433:884,740...962,932
Ensembl chrNW_004955433:884,740...962,932
JBrowse link
lysosomal matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 RGD
MGI
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO PMID:18644871 MGI PMID:18644871 RGD:10412301 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
lysosomal membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 ISO (PMID:10748049), (PMID:17977821), (PMID:18952056) UniProtKB PMID:10748049, PMID:17977821, PMID:18952056 NCBI chrNW_004955482:5,817,334...5,838,642
Ensembl chrNW_004955482:5,817,334...5,837,220
JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:16946495) UniProtKB PMID:16946495 NCBI chrNW_004955580:459,715...475,363
Ensembl chrNW_004955580:459,715...475,774
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 ISO (PMID:27456980) UniProt PMID:27456980 NCBI chrNW_004955523:1,170,306...1,181,352
Ensembl chrNW_004955523:1,170,303...1,182,467
JBrowse link
G Abhd6 abhydrolase domain containing 6, acylglycerol lipase ISO (MGI:MGI:5700445|PMID:26491015) UniProt PMID:26491015 MGI:MGI:5700445 NCBI chrNW_004955430:1,809,969...1,861,441
Ensembl chrNW_004955430:1,808,924...1,861,441
JBrowse link
G Anxa2 annexin A2 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Anxa6 annexin A6 ISO (PMID:23360953) UniProtKB PMID:23360953 NCBI chrNW_004955408:2,522,027...2,565,862
Ensembl chrNW_004955408:2,522,027...2,570,426
JBrowse link
G Arl8b ADP ribosylation factor like GTPase 8B colocalizes_with ISO (PMID:25898167) UniProtKB PMID:25898167 NCBI chrNW_004955421:8,231,337...8,276,907
Ensembl chrNW_004955421:8,231,582...8,276,907
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:23499937) ParkinsonsUK-UCL PMID:23499937 NCBI chrNW_004955527:1,805,854...1,823,623
Ensembl chrNW_004955527:1,806,009...1,823,344
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 ISO (MGI:MGI:2387737|PMID:12133826) MGI PMID:12133826 MGI:MGI:2387737 NCBI chrNW_004955419:13,047,755...13,056,113
Ensembl chrNW_004955419:13,047,755...13,056,221
JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor ISO (MGI:MGI:5641105|PMID:25839652) CACAO PMID:25839652 MGI:MGI:5641105 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Cd63 CD63 molecule ISO (PMID:22431521), (PMID:23632027) UniProtKB PMID:22431521, PMID:23632027 NCBI chrNW_004955458:3,362,511...3,363,916
Ensembl chrNW_004955458:3,362,511...3,363,981
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO (MGI:MGI:6414690|PMID:28972156), (MGI:MGI:6414716|PMID:26342074) UniProt PMID:26342074, PMID:28972156 MGI:MGI:6414690, MGI:MGI:6414716 NCBI chrNW_004955403:36,625,871...36,710,201
Ensembl chrNW_004955403:36,625,770...36,710,201
JBrowse link
G Clcn4 chloride voltage-gated channel 4 ISO (PMID:28972156) UniProt PMID:28972156 NCBI chrNW_004955544:2,922,338...2,999,979
Ensembl chrNW_004955544:2,922,338...3,000,112
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:15598649), (PMID:23840424)
(PMID:10332042), (PMID:9384607)
UniProt PMID:9384607, PMID:10332042, PMID:15598649, PMID:23840424 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
G Cln5 CLN5 intracellular trafficking protein ISO (PMID:12134079) UniProtKB PMID:12134079 NCBI chrNW_004955404:30,229,632...30,235,677 JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (PMID:11150305) UniProtKB PMID:11150305 NCBI chrNW_004955467:13,151,663...13,169,005
Ensembl chrNW_004955467:13,151,957...13,168,696
JBrowse link
G Ctsa cathepsin A ISO PMID:12505983 ParkinsonsUK-UCL PMID:12505983 RGD:10412300 NCBI chrNW_004955445:11,399,151...11,405,069
Ensembl chrNW_004955445:11,399,151...11,405,069
JBrowse link
G Ctsd cathepsin D ISO (PMID:17188016) ARUK-UCL PMID:17188016 NCBI chrNW_004955422:13,576,315...13,584,267 JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955455:5,881,631...6,005,514 JBrowse link
G Ffar4 free fatty acid receptor 4 ISO (PMID:22282525) UniProt PMID:22282525 NCBI chrNW_004955507:81,910...110,047
Ensembl chrNW_004955507:81,284...110,047
JBrowse link
G Flcn folliculin ISO (PMID:24081491), (PMID:24095279), (PMID:27113757), (PMID:29848618), (PMID:31672913) UniProt PMID:24081491, PMID:24095279, PMID:27113757, PMID:29848618, PMID:31672913 NCBI chrNW_004955577:672,774...694,140 JBrowse link
G Fnip1 folliculin interacting protein 1 ISO (PMID:24081491), (PMID:29848618) UniProt PMID:24081491, PMID:29848618 NCBI chrNW_004955408:3,117,258...3,238,223
Ensembl chrNW_004955408:3,117,277...3,238,223
JBrowse link
G Gba glucosylceramidase beta ISO (PMID:17187079)
(MGI:MGI:3773765|PMID:18022370)
UniProt
BHF-UCL
PMID:17187079, PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Gpr137 G protein-coupled receptor 137 ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004955422:20,791,144...20,795,451
Ensembl chrNW_004955422:20,790,104...20,795,423
JBrowse link
G Gpr137b G protein-coupled receptor 137B ISO (PMID:31036939)
(MGI:MGI:6362357|PMID:31173907)
UniProt PMID:31036939, PMID:31173907 MGI:MGI:6362357 NCBI chrNW_004955492:3,916,536...3,952,330
Ensembl chrNW_004955492:3,916,536...3,952,330
JBrowse link
G Gpr137c G protein-coupled receptor 137C ISO (PMID:31036939) UniProt PMID:31036939 NCBI chrNW_004955409:10,533,840...10,592,130
Ensembl chrNW_004955409:10,533,840...10,592,130
JBrowse link
G Gpr143 G protein-coupled receptor 143 ISO (PMID:16621890) UniProtKB PMID:16621890 NCBI chrNW_004955499:7,900,276...7,953,847
Ensembl chrNW_004955499:7,909,019...7,928,431
JBrowse link
G Grn granulin precursor ISO (PMID:21092856) UniProt PMID:21092856 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ISO (PMID:19823584), (PMID:20650889) UniProtKB PMID:19823584, PMID:20650889 NCBI chrNW_004955457:13,351,963...13,386,521
Ensembl chrNW_004955457:13,349,213...13,387,251
JBrowse link
G Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ISO (PMID:25189619) UniProtKB PMID:25189619 NCBI chrNW_004955485:8,270,997...8,273,060
Ensembl chrNW_004955485:8,271,134...8,273,056
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:18644871 ParkinsonsUK-UCL PMID:18644871 RGD:10412301 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO PMID:18644871 ParkinsonsUK-UCL
RGD
PMID:9038169, PMID:18644871 RGD:10059368, RGD:10412301 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955429:18,356,642...18,372,928
Ensembl chrNW_004955429:18,356,642...18,372,928
JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO PMID:8662539
PMID:11082038
PMID:18644871
(PMID:15297306), (PMID:21896273)
(MGI:MGI:3773765|PMID:18022370), (MGI:MGI:5291841|PMID:21896273)
ParkinsonsUK-UCL
MGI
BHF-UCL
PMID:8662539, PMID:11082038, PMID:15297306, PMID:18022370, PMID:18644871, PMID:21896273 MGI:MGI:3773765, MGI:MGI:5291841, RGD:10412301, RGD:10412302, RGD:1581607 NCBI chrNW_004955572:1,423,048...1,464,443
Ensembl chrNW_004955572:1,422,981...1,462,622
JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (MGI:MGI:2675198|PMID:12938238) MGI PMID:12938238 MGI:MGI:2675198 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Laptm4a lysosomal protein transmembrane 4 alpha ISO (PMID:22096579) UniProtKB PMID:22096579 NCBI chrNW_004955469:2,604,464...2,626,835
Ensembl chrNW_004955469:2,604,464...2,627,043
JBrowse link
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:21224396), (PMID:22096579) UniProtKB PMID:21224396, PMID:22096579 NCBI chrNW_004955417:13,574,493...13,625,669
Ensembl chrNW_004955417:13,574,721...13,625,313
JBrowse link
G Litaf lipopolysaccharide induced TNF factor ISO (PMID:11274176) MGI PMID:11274176 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437
JBrowse link
G LOC102016503 cytochrome b ascorbate-dependent protein 3 ISO (MGI:MGI:3695337|PMID:16996694) UniProtKB PMID:16996694 MGI:MGI:3695337 NCBI chrNW_004955511:6,191,644...6,200,099
Ensembl chrNW_004955511:6,191,645...6,200,099
JBrowse link
G LOC102019320 mamu class II histocompatibility antigen, DR alpha chain ISO (PMID:18305173) UniProtKB PMID:18305173 NCBI chrNW_004955437:1,109,735...1,114,742
Ensembl chrNW_004955437:1,109,713...1,114,802
JBrowse link
G LOC102023521 HLA class II histocompatibility antigen, DM beta chain ISO (MGI:MGI:3033877|PMID:7584146) MGI PMID:7584146 MGI:MGI:3033877 NCBI chrNW_004955437:1,544,906...1,551,412 JBrowse link
G LOC102023843 HLA class II histocompatibility antigen, DM alpha chain ISO (MGI:MGI:3033762|PMID:7985028) MGI PMID:7985028 MGI:MGI:3033762 NCBI chrNW_004955437:1,558,806...1,562,294
Ensembl chrNW_004955437:1,558,911...1,562,162
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 ISO (MGI:MGI:4430128|PMID:19880452) UniProtKB PMID:19880452 MGI:MGI:4430128 NCBI chrNW_004955403:41,187,039...41,484,734
Ensembl chrNW_004955403:41,060,246...41,484,734
JBrowse link
G Mcoln1 mucolipin 1 ISO RGD PMID:17613490 RGD:7205504 NCBI chrNW_004955563:1,703,408...1,712,908
Ensembl chrNW_004955563:1,703,416...1,745,996
JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog ISO (PMID:29750193) UniProt PMID:29750193 NCBI chrNW_004955541:99,319...114,122
Ensembl chrNW_004955541:101,275...115,079
JBrowse link
G Mios meiosis regulator for oocyte development ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955432:14,658,624...14,693,116
Ensembl chrNW_004955432:14,657,973...14,693,116
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Myo7a myosin VIIA ISO (PMID:16001398) UniProtKB PMID:16001398 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Ncstn nicastrin ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004955468:12,111,078...12,126,404
Ensembl chrNW_004955468:12,111,078...12,127,033
JBrowse link
G Neu3 neuraminidase 3 ISO (PMID:26251452) UniProt PMID:26251452 NCBI chrNW_004955414:16,783,996...16,798,368
Ensembl chrNW_004955414:16,788,171...16,798,535
JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955532:2,148,950...2,152,671
Ensembl chrNW_004955532:2,148,950...2,152,671
JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955442:17,025,232...17,068,399
Ensembl chrNW_004955442:17,025,194...17,070,753
JBrowse link
G Oca2 OCA2 melanosomal transmembrane protein ISO (PMID:19116314) UniProtKB PMID:19116314 NCBI chrNW_004955533:1,522,878...1,796,673
Ensembl chrNW_004955533:1,522,795...1,797,116
JBrowse link
G Ocln occludin ISO (PMID:28718701) ARUK-UCL PMID:28718701 NCBI chrNW_004955575:163,646...210,379 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ISO (MGI:MGI:6304515|PMID:29644770)
(PMID:16365287), (PMID:29146937)
UniProt
FlyBase
PMID:16365287, PMID:29146937, PMID:29644770 MGI:MGI:6304515 NCBI chrNW_004955550:1,275,921...1,279,262
Ensembl chrNW_004955550:1,275,921...1,279,270
JBrowse link
G Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ISO (PMID:16365287) FlyBase PMID:16365287 NCBI chrNW_004955417:7,769,365...7,825,892
Ensembl chrNW_004955417:7,771,218...7,825,799
JBrowse link
G Pla2g4e phospholipase A2 group IVE ISO (MGI:MGI:6161105|PMID:29447909) UniProt PMID:29447909 MGI:MGI:6161105 NCBI chrNW_004955416:8,765,620...8,826,184
Ensembl chrNW_004955416:8,765,561...8,804,616
JBrowse link
G Pld3 phospholipase D family member 3 ISO (MGI:MGI:6115966|PMID:28128235) UniProt PMID:28128235 MGI:MGI:6115966 NCBI chrNW_004955578:884,700...905,426
Ensembl chrNW_004955578:884,700...894,433
JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:12736250 RGD:724403 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Rnf13 ring finger protein 13 ISO (MGI:MGI:3844769|PMID:19292867) UniProtKB PMID:19292867 MGI:MGI:3844769 NCBI chrNW_004955448:1,053,676...1,195,612 JBrowse link
G Rnf152 ring finger protein 152 ISO (PMID:25936802) UniProtKB PMID:25936802 NCBI chrNW_004955402:45,774,565...45,846,649
Ensembl chrNW_004955402:45,774,565...45,846,518
JBrowse link
G Rnf183 ring finger protein 183 ISO (MGI:MGI:6113025|PMID:29300766) UniProt PMID:29300766 MGI:MGI:6113025 NCBI chrNW_004955419:14,181,073...14,189,230
Ensembl chrNW_004955419:14,181,073...14,189,230
JBrowse link
G Scarb2 scavenger receptor class B member 2 ISO (MGI:MGI:3773765|PMID:18022370) BHF-UCL PMID:18022370 MGI:MGI:3773765 NCBI chrNW_004955433:884,740...962,932
Ensembl chrNW_004955433:884,740...962,932
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955561:1,707,053...1,723,715
Ensembl chrNW_004955561:1,707,053...1,723,862
JBrowse link
G Seh1l SEH1 like nucleoporin ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955402:679,109...698,624
Ensembl chrNW_004955402:681,436...698,624
JBrowse link
G Sidt2 SID1 transmembrane family member 2 ISO (MGI:MGI:4867132|PMID:20965152)
(PMID:17897319)
UniProtKB PMID:17897319, PMID:20965152 MGI:MGI:4867132 NCBI chrNW_004955412:18,505,453...18,521,667
Ensembl chrNW_004955412:18,505,453...18,522,082
JBrowse link
G Slc15a3 solute carrier family 15 member 3 ISO (MGI:MGI:5571205|PMID:24695226) RGD
UniProt
PMID:11336635, PMID:24695226 MGI:MGI:5571205, RGD:633591 NCBI chrNW_004955511:5,574,686...5,582,992
Ensembl chrNW_004955511:5,574,840...5,582,307
JBrowse link
G Slc15a4 solute carrier family 15 member 4 ISO (MGI:MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:MGI:5571205 NCBI chrNW_004955482:2,327,137...2,343,980 JBrowse link
G Slc17a5 solute carrier family 17 member 5 ISO (PMID:3961501) MGI PMID:3961501 NCBI chrNW_004955493:8,693,933...8,719,250
Ensembl chrNW_004955493:8,693,679...8,719,250
JBrowse link
G Slc26a11 solute carrier family 26 member 11 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004955506:2,683,637...2,701,889
Ensembl chrNW_004955506:2,684,259...2,700,837
JBrowse link
G Slc2a6 solute carrier family 2 member 6 ISO (PMID:30431159) UniProt PMID:30431159 NCBI chrNW_004955513:2,796,086...2,802,051
Ensembl chrNW_004955513:2,796,531...2,802,054
JBrowse link
G Slc35f6 solute carrier family 35 member F6 ISO (PMID:20957757) UniProtKB PMID:20957757 NCBI chrNW_004955469:8,774,225...8,787,549
Ensembl chrNW_004955469:8,773,989...8,787,549
JBrowse link
G Slc38a9 solute carrier family 38 member 9 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955446:12,042,848...12,132,211
Ensembl chrNW_004955446:12,042,313...12,132,211
JBrowse link
G Slc39a14 solute carrier family 39 member 14 ISO (PMID:20682781) UniProt PMID:20682781 NCBI chrNW_004955403:45,828,247...45,867,309
Ensembl chrNW_004955403:45,827,942...45,867,309
JBrowse link
G Slc39a8 solute carrier family 39 member 8 ISO (PMID:18390834), (PMID:19401385) UniProt PMID:18390834, PMID:19401385 NCBI chrNW_004955496:6,016,727...6,106,965
Ensembl chrNW_004955496:6,040,029...6,109,907
JBrowse link
G Slc48a1 solute carrier family 48 member 1 ISO (PMID:18418376) WormBase PMID:18418376 NCBI chrNW_004955500:6,675,631...6,691,942
Ensembl chrNW_004955500:6,679,908...6,691,942
JBrowse link
G Slc66a1 solute carrier family 66 member 1 ISO PMID:23169667
(PMID:22822152)
UniProt
UniProtKB
PMID:22822152, PMID:23169667 RGD:8553575 NCBI chrNW_004955452:17,459...22,259
Ensembl chrNW_004955452:16,770...26,189
JBrowse link
G Spag9 sperm associated antigen 9 ISO (PMID:29146937) UniProt PMID:29146937 NCBI chrNW_004955451:10,800,251...10,895,400
Ensembl chrNW_004955451:10,800,128...10,895,400
JBrowse link
G Sppl2a signal peptide peptidase like 2A ISO (MGI:MGI:5291841|PMID:21896273) MGI PMID:21896273 MGI:MGI:5291841 NCBI chrNW_004955409:3,642,113...3,670,779
Ensembl chrNW_004955409:3,645,555...3,670,551
JBrowse link
G Sppl2b signal peptide peptidase like 2B ISO (PMID:15998642) UniProtKB PMID:15998642 NCBI chrNW_004955495:5,816,979...5,829,938
Ensembl chrNW_004955495:5,818,337...5,829,889
JBrowse link
G Stx17 syntaxin 17 NOT ISO (PMID:10930465) UniProtKB PMID:10930465 NCBI chrNW_004955419:25,674,771...25,741,357
Ensembl chrNW_004955419:25,674,771...25,741,355
JBrowse link
G Stx7 syntaxin 7 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004955436:12,928,274...12,975,745 JBrowse link
G Stx8 syntaxin 8 ISO RGD PMID:15133481 RGD:4892614 NCBI chrNW_004955467:7,524,223...7,789,630
Ensembl chrNW_004955467:7,523,464...7,792,056
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex ISO (PMID:28199315) UniProtKB PMID:28199315 NCBI chrNW_004955537:2,968,839...3,017,863
Ensembl chrNW_004955537:2,968,839...3,017,863
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 ISO (PMID:22342342) UniProtKB PMID:22342342 NCBI chrNW_004955460:14,106,711...14,137,983
Ensembl chrNW_004955460:14,106,711...14,138,033
JBrowse link
G Tfeb transcription factor EB ISO (PMID:22343943), (PMID:22692423) UniProt PMID:22343943, PMID:22692423 NCBI chrNW_004955437:8,102,241...8,141,001
Ensembl chrNW_004955437:8,098,976...8,141,001
JBrowse link
G Tm4sf5 transmembrane 4 L six family member 5 ISO (PMID:30956113) UniProt PMID:30956113 NCBI chrNW_004955467:10,178,892...10,196,230
Ensembl chrNW_004955467:10,184,856...10,199,543
JBrowse link
G Tm6sf1 transmembrane 6 superfamily member 1 ISO (MGI:MGI:5619893|PMID:25422095) UniProtKB PMID:25422095 MGI:MGI:5619893 NCBI chrNW_004955416:13,561,872...13,584,238
Ensembl chrNW_004955416:13,561,880...13,584,454
JBrowse link
G Tmbim1 transmembrane BAX inhibitor motif containing 1 ISO (PMID:16607040) UniProtKB PMID:16607040 NCBI chrNW_004955453:15,083,179...15,100,197
Ensembl chrNW_004955453:15,092,522...15,099,021
JBrowse link
G Tmem106b transmembrane protein 106B ISO (PMID:24357581) UniProtKB PMID:24357581 NCBI chrNW_004955432:18,619,418...18,644,876
Ensembl chrNW_004955432:18,619,413...18,639,151
JBrowse link
G Tmem165 transmembrane protein 165 ISO (PMID:23575229) UniProtKB PMID:23575229 NCBI chrNW_004955447:15,538,958...15,543,885
Ensembl chrNW_004955447:15,538,958...15,543,892
JBrowse link
G Tmem192 transmembrane protein 192 ISO (PMID:20370317) UniProtKB PMID:20370317 NCBI chrNW_004955403:40,202,180...40,211,747
Ensembl chrNW_004955403:40,199,850...40,212,765
JBrowse link
G Tmem79 transmembrane protein 79 ISO (MGI:MGI:5518480|PMID:24060273) UniProtKB PMID:24060273 MGI:MGI:5518480 NCBI chrNW_004955545:2,420,594...2,436,485
Ensembl chrNW_004955545:2,420,592...2,436,485
JBrowse link
G Tmem9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chrNW_004955406:37,279,885...37,299,196
Ensembl chrNW_004955406:37,279,694...37,314,251
JBrowse link
G Tpcn1 two pore segment channel 1 ISO (PMID:19620632) UniProtKB PMID:19620632 NCBI chrNW_004955482:9,538,572...9,594,739
Ensembl chrNW_004955482:9,542,079...9,592,972
JBrowse link
G Tpcn2 two pore segment channel 2 ISO (PMID:19387438), (PMID:19620632)
(MGI:MGI:5285171|PMID:19557428)
UniProtKB PMID:19387438, PMID:19557428, PMID:19620632 MGI:MGI:5285171 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 colocalizes_with ISO (MGI:MGI:5775261|PMID:25848864) UniProtKB PMID:25848864 MGI:MGI:5775261 NCBI chrNW_004955437:7,827,329...7,846,406 JBrowse link
G Trim23 tripartite motif containing 23 ISO (PMID:9671726) HGNC PMID:9671726 NCBI chrNW_004955446:3,480,177...3,509,050
Ensembl chrNW_004955446:3,479,858...3,509,050
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (MGI:MGI:5298324|PMID:21753080) UniProtKB PMID:21753080 MGI:MGI:5298324 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 colocalizes_with ISO (PMID:1376922) UniProtKB PMID:1376922 NCBI chrNW_004955516:876,542...898,763
Ensembl chrNW_004955516:876,354...891,206
JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:21822278) UniProtKB PMID:21822278 NCBI chrNW_004955495:4,456,182...4,465,954
Ensembl chrNW_004955495:4,456,308...4,466,254
JBrowse link
G Vamp7 vesicle associated membrane protein 7 ISO PMID:10459012 RGD
UniProt
PMID:10459012, PMID:15133481 RGD:4892614, RGD:8554473 NCBI chrNW_004955594:20,496...72,648
Ensembl chrNW_004955594:18,727...72,654
JBrowse link
G Vamp8 vesicle associated membrane protein 8 ISO (PMID:23217709) RGD
UniProtKB
PMID:15133481, PMID:23217709 RGD:4892614 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO (PMID:30709847) UniProt PMID:30709847 NCBI chrNW_004955512:2,037,803...2,267,197
Ensembl chrNW_004955512:2,039,115...2,267,099
JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004955416:8,893,249...8,936,351
Ensembl chrNW_004955416:8,893,249...8,936,351
JBrowse link
G Vps41 VPS41 subunit of HOPS complex ISO (PMID:23167963) UniProtKB PMID:23167963 NCBI chrNW_004955460:4,555,870...4,749,154
Ensembl chrNW_004955460:4,555,870...4,749,153
JBrowse link
G Vti1b vesicle transport through interaction with t-SNAREs 1B ISO (PMID:18033301), (PMID:23217709) UniProtKB PMID:18033301, PMID:23217709 NCBI chrNW_004955466:2,527,750...2,549,599
Ensembl chrNW_004955466:2,527,753...2,549,568
JBrowse link
G Wdr24 WD repeat domain 24 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955442:16,513,074...16,519,296
Ensembl chrNW_004955442:16,513,448...16,519,296
JBrowse link
G Wdr59 WD repeat domain 59 ISO (PMID:28199306) UniProtKB PMID:28199306 NCBI chrNW_004955484:2,576,505...2,668,001
Ensembl chrNW_004955484:2,576,208...2,670,324
JBrowse link
G Wdr81 WD repeat domain 81 ISO (PMID:27126989) UniProtKB PMID:27126989 NCBI chrNW_004955481:1,450,127...1,462,564
Ensembl chrNW_004955481:1,449,350...1,462,555
JBrowse link
mast cell granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:11005211 RGD:7421660 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Clnk cytokine dependent hematopoietic cell linker ISO (MGI:MGI:2179131|PMID:10744659) UniProt PMID:10744659 MGI:MGI:2179131 NCBI chrNW_004955549:2,166,891...2,375,902 JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:16246270 RGD:1579983 NCBI chrNW_004955486:2,061,196...2,062,805
Ensembl chrNW_004955486:2,060,735...2,063,003
JBrowse link
G Srgn serglycin ISO (MGI:MGI:3056870|PMID:15231821) UniProtKB PMID:15231821 MGI:MGI:3056870 NCBI chrNW_004955437:21,954,837...21,966,552
Ensembl chrNW_004955437:21,951,732...21,965,581
JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 ISO (PMID:17548643) BHF-UCL PMID:17548643 NCBI chrNW_004955477:10,894,288...10,906,961
Ensembl chrNW_004955477:10,895,446...10,907,215
JBrowse link
G Pla2g5 phospholipase A2 group V ISO (MGI:MGI:3639848|PMID:16407308) UniProt PMID:16407308 MGI:MGI:3639848 NCBI chrNW_004955452:662,281...721,507
Ensembl chrNW_004955452:710,271...723,142
JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955420:21,020,938...21,033,022
Ensembl chrNW_004955420:21,019,212...21,032,976
JBrowse link
G Lamp1 lysosomal associated membrane protein 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004955404:557,090...573,532
Ensembl chrNW_004955404:557,862...573,379
JBrowse link
secondary lysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crhbp corticotropin releasing hormone binding protein ISO RGD PMID:10524337 RGD:5490549 NCBI chrNW_004955425:23,953,957...23,966,207
Ensembl chrNW_004955425:23,953,912...23,966,352
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12025
    cellular anatomical entity 11935
      cytoplasm 7907
        vacuole 401
          lytic vacuole 332
            lysosome 332
              UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
              cytolytic granule + 4
              endolysosome + 5
              lysosomal glycocalyx 0
              lysosomal lumen + 8
              lysosomal membrane + 121
              lysosomal multienzyme complex 0
              mast cell granule 4
              megasome 0
              primary lysosome + 14
              secondary lysosome + 16
Path 2
Term Annotations click to browse term
  cellular_component 12025
    cellular anatomical entity 11935
      organelle 9322
        membrane-bounded organelle 8249
          intracellular membrane-bounded organelle 7640
            vacuole 401
              lytic vacuole 332
                lysosome 332
                  UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex 0
                  cytolytic granule + 4
                  endolysosome + 5
                  lysosomal glycocalyx 0
                  lysosomal lumen + 8
                  lysosomal membrane + 121
                  lysosomal multienzyme complex 0
                  mast cell granule 4
                  megasome 0
                  primary lysosome + 14
                  secondary lysosome + 16
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.