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ONTOLOGY REPORT - ANNOTATIONS


Term:spliceosomal complex
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Accession:GO:0005681 term browser browse the term
Definition:Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
Synonyms:exact_synonym: spliceosome complex
 broad_synonym: spliceosome
 xref: Wikipedia:Spliceosome


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spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07054367.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:150,135,821...150,153,775 JBrowse link
G AABR07061152.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:106,982,503...106,983,279 JBrowse link
G Aar2 AAR2 splicing factor IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:152,626,738...152,648,365
Ensembl chr 3:152,626,757...152,649,609
JBrowse link
G AC117925.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:114,760,879...114,764,726 JBrowse link
G Api5 apoptosis inhibitor 5 ISO (MGI:2150845|PMID:11555636) RGD PMID:11555636 MGI:2150845 NCBI chr 3:83,310,878...83,336,053
Ensembl chr 3:83,310,884...83,335,960
JBrowse link
G Aqr aquarius intron-binding spliceosomal factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:105,570,399...105,640,431
Ensembl chr 3:105,570,292...105,640,463
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor ISO (PMID:12169396) RGD PMID:12169396 NCBI chr 2:205,662,633...205,670,514
Ensembl chr 2:205,662,588...205,670,511
JBrowse link
G Bud31 BUD31 homolog IBA
IEA
PMID:21873635
GO_REF:0000043
UniProt PMID:21873635 GO_REF:0000043, RGD:13792537 NCBI chr12:11,232,963...11,240,449
Ensembl chr12:11,232,964...11,240,400
JBrowse link
G Cactin cactin, spliceosome C complex subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Cirbp cold inducible RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO
ISS
(PMID:11991638)
GO_REF:0000024
RGD
UniProt
PMID:11991638 GO_REF:0000024 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Ctnnbl1 catenin, beta like 1 ISO
IBA
ISS
(PMID:20176811)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20176811, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:154,212,245...154,373,170
Ensembl chr 3:154,212,202...154,373,169
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein ISO
ISS
(PMID:20176811)
GO_REF:0000024
RGD
UniProt
PMID:20176811 GO_REF:0000024 NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Ddx39b DExD-box helicase 39B ISO (PMID:18593880) RGD PMID:18593880 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Ddx41 DEAD-box helicase 41 colocalizes_with ISO
IBA
(PMID:25920683)
PMID:21873635
RGD PMID:25920683, PMID:21873635 RGD:13792537 NCBI chr17:9,631,925...9,637,317
Ensembl chr17:9,631,925...9,637,316
JBrowse link
G Dhx15 DEAH-box helicase 15 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:61,136,740...61,174,880
Ensembl chr14:61,136,746...61,174,880
JBrowse link
G Dhx16 DEAH-box helicase 16 ISO
IBA
(PMID:25296192)
PMID:21873635
RGD PMID:25296192, PMID:21873635 RGD:13792537 NCBI chr20:3,368,971...3,386,087
Ensembl chr20:3,367,150...3,386,106
JBrowse link
G Dhx32 DEAH-box helicase 32 (putative) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:205,789,442...205,848,727
Ensembl chr 1:205,789,442...205,842,428
JBrowse link
G Dhx38 DEAH-box helicase 38 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:42,110,291...42,127,540
Ensembl chr19:42,110,327...42,127,542
JBrowse link
G Dqx1 DEAQ box RNA-dependent ATPase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,890,201...113,899,355
Ensembl chr 4:113,890,509...113,899,347
JBrowse link
G Gemin2 gem (nuclear organelle) associated protein 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:80,108,751...80,122,382
Ensembl chr 6:80,108,655...80,122,365
JBrowse link
G Gpkow G patch domain and KOW motifs ISO (PMID:25296192) RGD PMID:25296192 NCBI chr  X:15,636,567...15,651,332
Ensembl chr  X:15,636,563...15,651,332
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISS
ISO
GO_REF:0000024
(PMID:25689357), (PMID:9731529)
HGNC
RGD
PMID:9731529 PMID:25689357 GO_REF:0000024 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO
IEA
(PMID:9731529)
GO_REF:0000043
RGD
UniProt
PMID:9731529 GO_REF:0000043 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO
ISS
(PMID:9731529)
GO_REF:0000024
RGD
HGNC
PMID:9731529 GO_REF:0000024 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor colocalizes_with ISO (PMID:19641227), (PMID:23144703) RGD PMID:19641227 PMID:23144703 NCBI chr 2:188,051,657...188,080,280
Ensembl chr 2:188,052,236...188,080,301
JBrowse link
G Lgals3 galectin 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:24,153,602...24,165,537
Ensembl chr15:24,141,651...24,165,537
JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:59,911,439...59,913,324
Ensembl chr 5:59,911,431...59,913,348
JBrowse link
G LOC102548514 crooked neck-like protein 1-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
JBrowse link
G Ncl nucleolin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Prpf18 pre-mRNA processing factor 18 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
JBrowse link
G Prpf19 pre-mRNA processing factor 19 NOT ISO (MGI:3640624|PMID:16352598) RGD PMID:16352598 MGI:3640624 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO (MGI:1859428|PMID:10829067) RGD PMID:10829067 MGI:1859428 NCBI chr 2:223,261,444...223,323,075
Ensembl chr 2:223,262,852...223,322,585
JBrowse link
G Rbm3 RNA binding motif protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,098,880...15,102,344
Ensembl chr  X:15,098,904...15,102,340
JBrowse link
G Rbm5 RNA binding motif protein 5 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:116,502,941...116,532,178
Ensembl chr 8:116,502,937...116,532,169
JBrowse link
G Rbmx RNA binding motif protein, X-linked IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:159,881,835...159,891,405
Ensembl chr  X:159,884,885...159,891,326
JBrowse link
G Rbmxl1 RBMX like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Rbmxl1b RNA binding motif protein, X-linked-like 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:42,186,612...42,188,294
Ensembl chr 4:42,186,612...42,188,289
JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:380,337...390,669
Ensembl chr  Y:380,382...390,667
JBrowse link
G RGD1305178 similar to Hypothetical protein MGC11690 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:9,813,914...9,822,222
Ensembl chr 3:9,813,912...9,822,186
JBrowse link
G Rheb Ras homolog, mTORC1 binding IEA
ISO
GO_REF:0000107
(MGI:2150845|PMID:11555636)
Ensembl
RGD
PMID:11555636 GO_REF:0000107 MGI:2150845 NCBI chr 4:6,827,429...6,873,384
Ensembl chr 4:6,827,429...6,873,383
JBrowse link
G Sf1 splicing factor 1 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 1:221,735,512...221,749,216
Ensembl chr 1:221,735,517...221,749,086
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 ISO
IBA
(PMID:9731529)
PMID:21873635
RGD PMID:9731529, PMID:21873635 RGD:13792537 NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 ISO
IBA
(PMID:9731529)
PMID:21873635
RGD PMID:9731529, PMID:21873635 RGD:13792537 NCBI chr 2:198,312,428...198,317,180
Ensembl chr 2:198,312,428...198,317,180
JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO
IEA
IBA
ISS
(PMID:10197984)
GO_REF:0000104
PMID:21873635
PMID:15181151
RGD
UniProt
PMID:10197984, PMID:21873635, PMID:15181151 GO_REF:0000104, RGD:13792537, RGD:1304333 NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
JBrowse link
G Smndc1 survival motor neuron domain containing 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:274,096,068...274,107,138
Ensembl chr 1:274,096,068...274,107,138
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ISO
IBA
(PMID:8670905)
PMID:21873635
RGD PMID:8670905, PMID:21873635 RGD:13792537 NCBI chr 3:119,640,324...119,669,651
Ensembl chr 3:119,640,298...119,669,639
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISS
ISO
GO_REF:0000024
(PMID:9531537), (PMID:9731529)
UniProt
RGD
PMID:9531537 PMID:9731529 GO_REF:0000024 NCBI chr 1:101,367,470...101,388,153
Ensembl chr 1:101,367,471...101,388,129
JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 1:83,999,670...84,008,429
Ensembl chr 1:83,999,671...84,008,293
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 1:126,961,389...126,974,453
Ensembl chr 1:126,961,389...126,974,453
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 3:137,138,082...137,147,575
Ensembl chr 3:137,137,980...137,147,575
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO (PMID:7744013) RGD PMID:7744013 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:15194481) RGD PMID:15194481 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Srek1 splicing regulatory glutamic acid and lysine rich protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:33,806,035...33,841,594
Ensembl chr 2:33,809,807...33,841,499
JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 ISO (MGI:2150845|PMID:11555636) RGD PMID:11555636 MGI:2150845 NCBI chr 5:153,675,619...153,708,187
Ensembl chr 5:153,675,624...153,708,170
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO (MGI:2385701|PMID:11827461) RGD PMID:11827461 MGI:2385701 NCBI chr10:105,792,779...105,795,986
Ensembl chr10:105,792,779...105,795,958
JBrowse link
G Sugp1 SURP and G patch domain containing 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:21,100,923...21,131,795
Ensembl chr16:21,100,924...21,131,795
JBrowse link
G Tfip11 tuftelin interacting protein 11 ISO
ISS
(PMID:11991638)
GO_REF:0000024
RGD
UniProt
PMID:11991638 GO_REF:0000024 NCBI chr12:50,320,820...50,333,052
Ensembl chr12:50,320,821...50,333,052
JBrowse link
G Tra2a transformer 2 alpha homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:78,905,380...78,924,203
Ensembl chr 4:78,905,380...78,924,181
JBrowse link
G Tra2b transformer 2 beta homolog ISO
IBA
(PMID:25689357)
PMID:21873635
RGD PMID:25689357, PMID:21873635 RGD:13792537 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083
JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 ISO
IBA
(PMID:9731529)
PMID:21873635
RGD PMID:9731529, PMID:21873635 RGD:13792537 NCBI chr20:10,396,652...10,407,564
Ensembl chr20:10,396,621...10,407,554
JBrowse link
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:89,017,414...89,019,651
Ensembl chr 1:89,017,479...89,019,937
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:9731529) RGD PMID:9731529 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
G Usp39 ubiquitin specific peptidase 39 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:100,181,408...100,211,425
Ensembl chr 4:100,181,455...100,213,858
JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (MGI:2385701|PMID:11827461) RGD PMID:11827461 MGI:2385701 NCBI chr17:60,887,606...60,946,630
Ensembl chr17:60,888,017...60,946,426
JBrowse link
G Wbp11 WW domain binding protein 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,772,166...170,785,613
Ensembl chr 4:170,772,163...170,810,080
Ensembl chr 4:170,772,163...170,810,080
JBrowse link
G Wbp11l1 WW domain-binding protein 11-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,154,257...170,167,724
Ensembl chr 4:170,154,227...170,186,942
JBrowse link
G Wbp4 WW domain binding protein 4 ISO (MGI:1889883|PMID:9724750) RGD PMID:9724750 MGI:1889883 NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
JBrowse link
G Wdr83 WD repeat domain 83 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr19:26,188,644...26,194,193
Ensembl chr19:26,188,638...26,194,198
JBrowse link
G Zfp830 zinc finger protein 830 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 ISO
IBA
(MGI:6192413|PMID:29617656)
PMID:21873635
RGD PMID:29617656, PMID:21873635 MGI:6192413, RGD:13792537 NCBI chr14:107,750,162...107,751,895
Ensembl chr14:107,750,162...107,751,892
JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:32,304,707...32,327,419
Ensembl chr  X:32,304,757...32,328,364
JBrowse link
catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07008904.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:77,783,851...77,784,522 JBrowse link
G AABR07042226.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G AC126899.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:44,396,248...44,396,610 JBrowse link
G Alyref Aly/REF export factor ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:109,768,593...109,774,639
Ensembl chr10:109,770,876...109,774,639
JBrowse link
G Aqr aquarius intron-binding spliceosomal factor ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 3:105,570,399...105,640,431
Ensembl chr 3:105,570,292...105,640,463
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:205,662,633...205,670,514
Ensembl chr 2:205,662,588...205,670,511
JBrowse link
G Cactin cactin, spliceosome C complex subunit ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Cdc40 cell division cycle 40 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr20:48,503,973...48,574,546
Ensembl chr20:48,503,973...48,574,546
JBrowse link
G Cdc5l cell division cycle 5-like ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO
IBA
(PMID:11991638), (PMID:22961380)
PMID:21873635
RGD PMID:11991638 PMID:22961380, PMID:21873635 RGD:13792537 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Cwc27 CWC27 spliceosome associated cyclophilin ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 2:34,716,420...34,923,060
Ensembl chr 2:34,719,344...34,923,024
JBrowse link
G Ddx23 DEAD-box helicase 23 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 7:140,325,453...140,342,730
Ensembl chr 7:140,325,431...140,342,727
JBrowse link
G Ddx41 DEAD-box helicase 41 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr17:9,631,925...9,637,317
Ensembl chr17:9,631,925...9,637,316
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Dhx35 DEAH-box helicase 35 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 3:155,297,545...155,354,857
Ensembl chr 3:155,297,566...155,356,462
JBrowse link
G Dhx38 DEAH-box helicase 38 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr19:42,110,291...42,127,540
Ensembl chr19:42,110,327...42,127,542
JBrowse link
G Dhx8 DEAH-box helicase 8 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr10:89,645,979...89,683,839
Ensembl chr10:89,645,973...89,683,446
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO
IBA
(PMID:11991638), (PMID:22961380)
PMID:21873635
RGD PMID:11991638 PMID:22961380, PMID:21873635 RGD:13792537 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Ess2 ess-2 splicing factor homolog ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr11:87,224,371...87,234,329
Ensembl chr11:87,224,421...87,233,326
JBrowse link
G Frg1 FSHD region gene 1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr16:53,957,858...53,978,865
Ensembl chr16:53,957,858...53,978,865
JBrowse link
G Gpatch1 G patch domain containing 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 1:91,529,096...91,578,032
Ensembl chr 1:91,529,112...91,578,048
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:11991638)
GO_REF:0000107
RGD
Ensembl
PMID:11991638 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 3:62,481,222...62,491,356
Ensembl chr 3:62,481,323...62,487,227
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:11991638) RGD PMID:11991638 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpf heterogeneous nuclear ribonucleoprotein F ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 4:149,957,143...149,978,896
Ensembl chr 4:149,957,206...149,978,895
JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr10:35,872,619...35,879,911
Ensembl chr10:35,870,232...35,879,910
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO (PMID:11991638) RGD PMID:11991638 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 5:154,668,194...154,699,967
Ensembl chr 5:154,668,179...154,699,966
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11991638)
Ensembl
RGD
PMID:11991638, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Isy1 ISY1 splicing factor homolog ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G LOC102548514 crooked neck-like protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
JBrowse link
G LOC310177 similar to RIKEN cDNA 0610040D20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:77,783,788...77,784,626 JBrowse link
G LOC500684 hypothetical protein LOC500684 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:103,932,428...103,935,122
Ensembl chr 6:103,932,428...103,935,122
JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 4:123,162,086...123,168,330
Ensembl chr 4:123,162,086...123,168,330
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,724,932...11,732,020
Ensembl chr 7:11,724,962...11,727,388
JBrowse link
G Magoh mago homolog, exon junction complex subunit ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 5:127,480,465...127,487,617
Ensembl chr 5:127,480,485...127,487,603
JBrowse link
G Magohb mago homolog B, exon junction complex subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:165,514,584...165,522,366
Ensembl chr 4:165,514,530...165,522,418
JBrowse link
G Mtrex Mtr4 exosome RNA helicase ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 2:44,726,716...44,787,013
Ensembl chr 2:44,717,781...44,786,963
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Plrg1 pleiotropic regulator 1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 2:182,040,338...182,056,669
Ensembl chr 2:182,040,318...182,056,673
JBrowse link
G Pnn pinin, desmosome associated protein ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 6:80,159,364...80,167,677
Ensembl chr 6:80,159,364...80,167,677
JBrowse link
G Ppie peptidylprolyl isomerase E ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr20:6,515,638...6,864,571
Ensembl chr20:6,515,638...6,864,571
JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 9:65,315,407...65,329,145
Ensembl chr 9:65,315,410...65,329,066
JBrowse link
G Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 2:34,288,853...34,313,094
Ensembl chr 2:34,290,199...34,313,094
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Prpf4b pre-mRNA processing factor 4B ISO (PMID:11991638) RGD PMID:11991638 NCBI chr17:30,680,454...30,714,542
Ensembl chr17:30,683,640...30,714,495
JBrowse link
G Prpf6 pre-mRNA processing factor 6 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 3:177,098,137...177,162,937
Ensembl chr 3:177,098,073...177,162,916
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Raly RALY heterogeneous nuclear ribonucleoprotein ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 3:150,322,834...150,387,345
Ensembl chr 3:150,323,116...150,387,332
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Rbm8a RNA binding motif protein 8A ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 2:198,755,261...198,758,028
Ensembl chr 2:198,755,262...198,758,028
JBrowse link
G Rbmx RNA binding motif protein, X-linked ISO (PMID:11991638) RGD PMID:11991638 NCBI chr  X:159,881,835...159,891,405
Ensembl chr  X:159,884,885...159,891,326
JBrowse link
G Rbmxl1 RBMX like 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410
JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr 3:119,640,324...119,669,651
Ensembl chr 3:119,640,298...119,669,639
JBrowse link
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 5:148,577,498...148,610,658
Ensembl chr 5:148,577,332...148,610,639
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 1:126,961,389...126,974,453
Ensembl chr 1:126,961,389...126,974,453
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 3:137,138,082...137,147,575
Ensembl chr 3:137,137,980...137,147,575
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd2l small nuclear ribonucleoprotein D2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:28,872,902...28,873,434
Ensembl chr20:28,873,007...28,873,363
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO (PMID:11991638) RGD PMID:11991638 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:195,074,328...195,096,460
Ensembl chr 1:195,074,330...195,096,460
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr 5:153,675,619...153,708,187
Ensembl chr 5:153,675,624...153,708,170
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:13,128,820...13,162,956
Ensembl chr10:13,145,099...13,162,343
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr 5:153,269,638...153,277,562
Ensembl chr 5:153,269,526...153,277,563
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Tfip11 tuftelin interacting protein 11 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr12:50,320,820...50,333,052
Ensembl chr12:50,320,821...50,333,052
JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr20:10,396,652...10,407,564
Ensembl chr20:10,396,621...10,407,554
JBrowse link
G Wdr83 WD repeat domain 83 IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr19:26,188,644...26,194,193
Ensembl chr19:26,188,638...26,194,198
JBrowse link
G Xab2 XPA binding protein 2 ISO
IBA
(PMID:11991638)
PMID:21873635
RGD PMID:11991638, PMID:21873635 RGD:13792537 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
G Zcchc8 zinc finger CCHC-type containing 8 ISO (PMID:11991638) RGD PMID:11991638 NCBI chr12:38,303,665...38,327,174
Ensembl chr12:38,303,624...38,326,502
JBrowse link
commitment complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf39 pre-mRNA processing factor 39 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,785,793...86,810,806
Ensembl chr 6:86,785,771...86,810,316
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:7,409,401...7,427,581
Ensembl chr20:7,409,401...7,427,581
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
post-mRNA release spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc12 coiled-coil domain containing 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,925,682...118,977,038
Ensembl chr 8:118,926,478...118,977,051
JBrowse link
G Ccdc130 coiled-coil domain containing 130 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:25,367,552...25,378,993
Ensembl chr19:25,367,543...25,378,974
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Cwf19l1 CWF19 like cell cycle control factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,887,014...263,910,251
Ensembl chr 1:263,887,015...263,910,251
JBrowse link
G Cwf19l2 CWF19 like cell cycle control factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:18,970,616...19,037,176
Ensembl chr 6:18,970,564...19,055,924
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Isy1 ISY1 splicing factor homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G LOC102548514 crooked neck-like protein 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
JBrowse link
G Myef2 myelin expression factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:117,353,490...117,389,582
Ensembl chr 3:117,354,382...117,389,561
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,269,638...153,277,562
Ensembl chr 5:153,269,526...153,277,563
JBrowse link
G Xab2 XPA binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
post-spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
precatalytic spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G AABR07042323.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:152,781,188...152,781,574 JBrowse link
G AC096024.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:141,503,833...141,504,111 JBrowse link
G AC126899.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:44,396,248...44,396,610 JBrowse link
G LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304
Ensembl chr 7:281,863,918...281,864,304
JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:123,162,086...123,168,330
Ensembl chr 4:123,162,086...123,168,330
JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:45,555,077...45,560,943
Ensembl chr 4:45,555,077...45,560,943
JBrowse link
G Phf5a PHD finger protein 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,095,286...123,101,851
Ensembl chr 7:123,095,288...123,101,869
JBrowse link
G Prpf31 pre-mRNA processing factor 31 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,150,786...64,162,461
Ensembl chr 1:64,150,786...64,162,461
JBrowse link
G Prpf38a pre-mRNA processing factor 38A ISO
IBA
(PMID:26673105)
PMID:21873635
RGD PMID:26673105, PMID:21873635 RGD:13792537 NCBI chr 5:128,174,835...128,186,532
Ensembl chr 5:128,174,835...128,186,532
JBrowse link
G Prpf38b pre-mRNA processing factor 38B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:211,706,245...211,715,271
Ensembl chr 2:211,706,228...211,715,311
JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,550,931...135,558,440
Ensembl chr  X:135,550,834...135,558,440
JBrowse link
G RGD1566078 similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,781,177...152,781,621 JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:7,101,715...7,102,427
Ensembl chr 1:7,101,715...7,102,426
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,042,301...57,061,379
Ensembl chr 5:57,042,705...57,061,365
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd2l small nuclear ribonucleoprotein D2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:28,872,902...28,873,434
Ensembl chr20:28,873,007...28,873,363
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpel1 small nuclear ribonucleoprotein polypeptide E-like1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:129,371,546...129,371,994 JBrowse link
G Snrpep2 small nuclear ribonucleoprotein polypeptide E pseudogene 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,503,818...141,504,126 JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,282,754...123,287,721
Ensembl chr 7:123,282,754...123,287,721
JBrowse link
G Wbp4 WW domain binding protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
JBrowse link
supraspliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific ISO
IEA
ISS
(PMID:18362360)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18362360 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Rbmx RNA binding motif protein, X-linked ISO (PMID:19282290) RGD PMID:19282290 NCBI chr  X:159,881,835...159,891,405
Ensembl chr  X:159,884,885...159,891,326
JBrowse link
G Rbmxl1 RBMX like 1 IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase ISO (PMID:18362360) RGD PMID:18362360 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
U12-type spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G Dhx15 DEAH-box helicase 15 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr14:61,136,740...61,174,880
Ensembl chr14:61,136,746...61,174,880
JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,724,932...11,732,020
Ensembl chr 7:11,724,962...11,727,388
JBrowse link
G Pdcd7 programmed cell death 7 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 8:70,860,671...70,875,471
Ensembl chr 8:70,860,671...70,875,471
JBrowse link
G Phf5a PHD finger protein 5A ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 7:123,095,286...123,101,851
Ensembl chr 7:123,095,288...123,101,869
JBrowse link
G Rbm41 RNA binding motif protein 41 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:111,272,347...111,325,203
Ensembl chr  X:111,269,490...111,325,186
JBrowse link
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 2:216,481,457...216,510,051
Ensembl chr 2:216,481,436...216,509,827
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 2:198,312,428...198,317,180
Ensembl chr 2:198,312,428...198,317,180
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 1:7,101,715...7,102,427
Ensembl chr 1:7,101,715...7,102,426
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410
JBrowse link
G Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr10:15,685,999...15,689,338
Ensembl chr10:15,686,008...15,689,325
JBrowse link
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 ISO
IBA
IEA
(PMID:15146077)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15146077, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:37,531,082...37,538,823
Ensembl chr12:37,531,095...37,538,403
JBrowse link
G Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr17:27,243,732...27,279,271
Ensembl chr17:27,243,781...27,279,260
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO (PMID:15146077) RGD PMID:15146077 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Ybx1 Y box binding protein 1 ISO (PMID:15146077) RGD PMID:15146077 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr 7:134,588,902...134,602,239
Ensembl chr 7:134,588,903...134,602,239
JBrowse link
G Zmat5 zinc finger, matrin type 5 ISO
IBA
(PMID:15146077)
PMID:21873635
RGD PMID:15146077, PMID:21873635 RGD:13792537 NCBI chr14:84,937,843...84,968,898
Ensembl chr14:84,953,786...84,969,116
JBrowse link
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 ISO (MGI:6192413|PMID:29617656) RGD PMID:29617656 MGI:6192413 NCBI chr14:107,750,162...107,751,895
Ensembl chr14:107,750,162...107,751,892
JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 ISO (PMID:15146077), (PMID:21041408) RGD PMID:15146077 PMID:21041408 NCBI chr  X:32,304,707...32,327,419
Ensembl chr  X:32,304,757...32,328,364
JBrowse link
U2-type catalytic step 1 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024964.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:22,851,465...22,853,022 JBrowse link
G Casc3 CASC3 exon junction complex subunit ISS
ISO
IEA
GO_REF:0000024
(PMID:29301961)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29301961 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,724,534...86,744,485
Ensembl chr10:86,724,427...86,745,927
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO (PMID:29301961) RGD PMID:29301961 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Cwc25 CWC25 spliceosome-associated protein homolog ISO (PMID:29301961) RGD PMID:29301961 NCBI chr10:85,684,898...85,709,568
Ensembl chr10:85,684,898...85,709,568
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Isy1 ISY1 splicing factor homolog ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G Magohb mago homolog B, exon junction complex subunit ISO (PMID:29301961) RGD PMID:29301961 NCBI chr 4:165,514,584...165,522,366
Ensembl chr 4:165,514,530...165,522,418
JBrowse link
G Prpf19 pre-mRNA processing factor 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO (PMID:29301961) RGD PMID:29301961 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Rbm22 RNA binding motif protein 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Rbm8a RNA binding motif protein 8A ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr 2:198,755,261...198,758,028
Ensembl chr 2:198,755,262...198,758,028
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ISS
ISO
IEA
GO_REF:0000024
(PMID:29301961)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29301961 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:119,640,324...119,669,651
Ensembl chr 3:119,640,298...119,669,639
JBrowse link
G Yju2 YJU2 splicing factor homolog ISO
IBA
(PMID:29301961)
PMID:21873635
RGD PMID:29301961, PMID:21873635 RGD:13792537 NCBI chr 9:11,098,914...11,108,806
Ensembl chr 9:11,098,924...11,108,741
JBrowse link
U2-type catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqr aquarius intron-binding spliceosomal factor ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:105,570,399...105,640,431
Ensembl chr 3:105,570,292...105,640,463
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 2:205,662,633...205,670,514
Ensembl chr 2:205,662,588...205,670,511
JBrowse link
G Bud31 BUD31 homolog ISO (PMID:28076346) RGD PMID:28076346 NCBI chr12:11,232,963...11,240,449
Ensembl chr12:11,232,964...11,240,400
JBrowse link
G Cdc40 cell division cycle 40 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:48,503,973...48,574,546
Ensembl chr20:48,503,973...48,574,546
JBrowse link
G Cdc5l cell division cycle 5-like ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346)
UniProt
RGD
PMID:28076346, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Dhx8 DEAH-box helicase 8 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:89,645,979...89,683,839
Ensembl chr10:89,645,973...89,683,446
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
JBrowse link
G LOC102548514 crooked neck-like protein 1-like ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
JBrowse link
G Plrg1 pleiotropic regulator 1 ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 2:182,040,338...182,056,669
Ensembl chr 2:182,040,318...182,056,673
JBrowse link
G Ppie peptidylprolyl isomerase E ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:6,515,638...6,864,571
Ensembl chr20:6,515,638...6,864,571
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 5:148,577,498...148,610,658
Ensembl chr 5:148,577,332...148,610,639
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 1:126,961,389...126,974,453
Ensembl chr 1:126,961,389...126,974,453
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:137,138,082...137,147,575
Ensembl chr 3:137,137,980...137,147,575
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO (PMID:28076346) RGD PMID:28076346 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:13,128,820...13,162,956
Ensembl chr10:13,145,099...13,162,343
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 5:153,269,638...153,277,562
Ensembl chr 5:153,269,526...153,277,563
JBrowse link
G Xab2 XPA binding protein 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346)
UniProt
RGD
PMID:28076346, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
U2-type post-mRNA release spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx15 DEAH-box helicase 15 colocalizes_with ISO (PMID:19103666) RGD PMID:19103666 NCBI chr14:61,136,740...61,174,880
Ensembl chr14:61,136,746...61,174,880
JBrowse link
G Gcfc2 GC-rich sequence DNA-binding factor 2 ISO (PMID:24304693) RGD PMID:24304693 NCBI chr 4:112,662,556...112,700,505
Ensembl chr 4:112,662,609...112,699,711
JBrowse link
G Tfip11 tuftelin interacting protein 11 ISO
IBA
ISS
(PMID:19103666)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19103666, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:50,320,820...50,333,052
Ensembl chr12:50,320,821...50,333,052
JBrowse link
U2-type post-spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf18 pre-mRNA processing factor 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
JBrowse link
U2-type precatalytic spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud13 BUD13 homolog ISS
ISO
IEA
GO_REF:0000024
(PMID:29360106)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29360106 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:50,573,026...50,588,860
Ensembl chr 8:50,573,026...50,588,858
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO (PMID:29360106) RGD PMID:29360106 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Cwc27 CWC27 spliceosome associated cyclophilin ISS
ISO
GO_REF:0000024
(PMID:29360106)
UniProt
RGD
PMID:29360106 GO_REF:0000024 NCBI chr 2:34,716,420...34,923,060
Ensembl chr 2:34,719,344...34,923,024
JBrowse link
G Dhx16 DEAH-box helicase 16 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr20:3,368,971...3,386,087
Ensembl chr20:3,367,150...3,386,106
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO (PMID:29361316) RGD PMID:29361316 NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
JBrowse link
G Ik IK cytokine ISS
ISO
GO_REF:0000024
(PMID:28781166)
UniProt
RGD
PMID:28781166 GO_REF:0000024 NCBI chr18:29,587,901...29,602,705
Ensembl chr18:29,587,901...29,608,338
JBrowse link
G LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304
Ensembl chr 7:281,863,918...281,864,304
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 4:123,162,086...123,168,330
Ensembl chr 4:123,162,086...123,168,330
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr16:20,506,399...20,511,818
Ensembl chr16:20,506,399...20,511,818
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 4:87,016,003...87,019,219
Ensembl chr 4:87,016,003...87,019,219
Ensembl chr 6:87,016,003...87,019,219
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr19:32,770,640...32,785,215
Ensembl chr19:32,770,655...32,785,215
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 7:11,724,932...11,732,020
Ensembl chr 7:11,724,962...11,727,388
JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 4:45,555,077...45,560,943
Ensembl chr 4:45,555,077...45,560,943
JBrowse link
G Magohb mago homolog B, exon junction complex subunit ISO (PMID:28502770) RGD PMID:28502770 NCBI chr 4:165,514,584...165,522,366
Ensembl chr 4:165,514,530...165,522,418
JBrowse link
G Mfap1a microfibrillar-associated protein 1A ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 3:113,428,855...113,445,435
Ensembl chr 3:113,272,850...113,445,435
JBrowse link
G NEWGENE_1359268 Smad nuclear interacting protein 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:143,063,206...143,070,899
Ensembl chr 5:143,063,099...143,070,884
JBrowse link
G Phf5a PHD finger protein 5A ISO (PMID:29360106) RGD PMID:29360106 NCBI chr 7:123,095,286...123,101,851
Ensembl chr 7:123,095,288...123,101,869
JBrowse link
G Prpf3 pre-mRNA processing factor 3 ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 2:197,947,010...197,971,464
Ensembl chr 2:197,947,010...197,971,463
JBrowse link
G Prpf31 pre-mRNA processing factor 31 ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:64,150,786...64,162,461
Ensembl chr 1:64,150,786...64,162,461
JBrowse link
G Prpf38a pre-mRNA processing factor 38A ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 5:128,174,835...128,186,532
Ensembl chr 5:128,174,835...128,186,532
JBrowse link
G Prpf4 pre-mRNA processing factor 4 ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 5:78,267,248...78,281,172
Ensembl chr 5:78,267,248...78,281,172
JBrowse link
G Prpf6 pre-mRNA processing factor 6 ISO
ISS
(PMID:28781166)
GO_REF:0000024
RGD
UniProt
PMID:28781166 GO_REF:0000024 NCBI chr 3:177,098,137...177,162,937
Ensembl chr 3:177,098,073...177,162,916
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO (PMID:28781166), (PMID:29361316), (PMID:30315277) RGD PMID:28781166 PMID:29361316 PMID:30315277 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 ISS
ISO
GO_REF:0000024
(PMID:29360106)
UniProt
RGD
PMID:29360106 GO_REF:0000024 NCBI chr  X:135,550,931...135,558,440
Ensembl chr  X:135,550,834...135,558,440
JBrowse link
G Rnf113a1 ring finger protein 113A1 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr  X:123,806,922...123,808,049
Ensembl chr  X:124,516,949...124,518,077
JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO (PMID:10882114), (PMID:29360106) RGD PMID:10882114 PMID:29360106 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 ISO
ISS
(PMID:29360106)
GO_REF:0000024
RGD
UniProt
PMID:29360106 GO_REF:0000024 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 ISO (PMID:29360106), (PMID:8022796) RGD PMID:8022796 PMID:29360106 NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO (PMID:28781166), (PMID:29360106) RGD PMID:28781166 PMID:29360106 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 ISO (PMID:28781166), (PMID:29360106) RGD PMID:28781166 PMID:29360106 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr 2:198,312,428...198,317,180
Ensembl chr 2:198,312,428...198,317,180
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 ISO (PMID:28781166), (PMID:29360106) RGD PMID:28781166 PMID:29360106 NCBI chr 1:7,101,715...7,102,427
Ensembl chr 1:7,101,715...7,102,426
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:28781166)
Ensembl
UniProt
RGD
PMID:28781166 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:57,042,301...57,061,379
Ensembl chr 5:57,042,705...57,061,365
JBrowse link
G Snip1 Smad nuclear interacting protein 1 ISS
ISO
GO_REF:0000024
(PMID:29360106)
UniProt
RGD
PMID:29360106 GO_REF:0000024 NCBI chr15:19,275,273...19,282,753
Ensembl chr 5:143,063,099...143,070,884
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ISS
ISO
IEA
GO_REF:0000024
(PMID:29361316)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29361316 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:119,640,324...119,669,651
Ensembl chr 3:119,640,298...119,669,639
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:126,961,389...126,974,453
Ensembl chr 1:126,961,389...126,974,453
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO
ISS
(PMID:28781166)
GO_REF:0000024
RGD
UniProt
PMID:28781166 GO_REF:0000024 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 3:137,138,082...137,147,575
Ensembl chr 3:137,137,980...137,147,575
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO (PMID:28781166) RGD PMID:28781166 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO (PMID:28781166) RGD PMID:28781166 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 ISS
ISO
GO_REF:0000024
(PMID:28781166)
UniProt
RGD
PMID:28781166 GO_REF:0000024 NCBI chr 7:123,282,754...123,287,721
Ensembl chr 7:123,282,754...123,287,721
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO (PMID:29361316) RGD PMID:29361316 NCBI chr10:13,128,820...13,162,956
Ensembl chr10:13,145,099...13,162,343
JBrowse link
G Txnl4a thioredoxin-like 4A ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:76,725,221...76,740,673
Ensembl chr18:76,725,247...76,740,688
JBrowse link
G Wbp4 WW domain binding protein 4 ISS
ISO
GO_REF:0000024
(PMID:28781166)
UniProt
RGD
PMID:28781166 GO_REF:0000024 NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
JBrowse link
G Zmat2 zinc finger, matrin type 2 ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:29,639,991...29,644,626
Ensembl chr18:29,639,872...29,644,652
JBrowse link
U2-type prespliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,724,932...11,732,020
Ensembl chr 7:11,724,962...11,727,388
JBrowse link
G Luc7l LUC7-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,538,878...15,572,651
Ensembl chr10:15,538,872...15,568,638
JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:66,290,319...66,357,970
Ensembl chr 4:66,290,389...66,354,711
JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:81,991,147...82,027,119
Ensembl chr10:81,991,147...82,027,119
JBrowse link
G Prpf39 pre-mRNA processing factor 39 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,785,793...86,810,806
Ensembl chr 6:86,785,771...86,810,316
JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:38,680,583...38,741,570
Ensembl chr 3:38,682,146...38,741,113
JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,958,952...140,981,588
Ensembl chr 7:140,967,282...140,981,583
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 IBA
ISO
PMID:21873635
(PMID:10882114)
RGD PMID:10882114, PMID:21873635 RGD:13792537 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:101,367,470...101,388,153
Ensembl chr 1:101,367,471...101,388,129
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr20:7,409,401...7,427,581
Ensembl chr20:7,409,401...7,427,581
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:195,074,328...195,096,460
Ensembl chr 1:195,074,330...195,096,460
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO
IBA
(PMID:2531895)
PMID:21873635
RGD PMID:2531895, PMID:21873635 RGD:13792537 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
U2-type spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud13 BUD13 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,573,026...50,588,860
Ensembl chr 8:50,573,026...50,588,858
JBrowse link
G Ccdc12 coiled-coil domain containing 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,925,682...118,977,038
Ensembl chr 8:118,926,478...118,977,051
JBrowse link
G Ccdc130 coiled-coil domain containing 130 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:25,367,552...25,378,993
Ensembl chr19:25,367,543...25,378,974
JBrowse link
G Cwc25 CWC25 spliceosome-associated protein homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,684,898...85,709,568
Ensembl chr10:85,684,898...85,709,568
JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:159,514,053...159,528,281
Ensembl chr  X:159,513,800...159,528,281
JBrowse link
G LOC108348079 RING finger protein 113A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:124,516,931...124,518,080
Ensembl chr  X:123,806,918...123,808,049
JBrowse link
G Rnf113a1 ring finger protein 113A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:123,806,922...123,808,049
Ensembl chr  X:124,516,949...124,518,077
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO (PMID:10882114) RGD PMID:10882114 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    protein-containing complex 6107
      nuclear protein-containing complex 1237
        spliceosomal complex 200
          U12-type spliceosomal complex + 29
          U2-type spliceosomal complex + 98
          catalytic step 1 spliceosome + 13
          catalytic step 2 spliceosome + 95
          post-mRNA release spliceosomal complex + 14
          post-spliceosomal complex + 2
          precatalytic spliceosome + 63
          prespliceosome + 18
          supraspliceosomal complex 4
          trans spliceosomal complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      organelle 13278
        membrane-bounded organelle 11263
          intracellular membrane-bounded organelle 10518
            nucleus 6987
              nuclear protein-containing complex 1237
                spliceosomal complex 200
                  U12-type spliceosomal complex + 29
                  U2-type spliceosomal complex + 98
                  catalytic step 1 spliceosome + 13
                  catalytic step 2 spliceosome + 95
                  post-mRNA release spliceosomal complex + 14
                  post-spliceosomal complex + 2
                  precatalytic spliceosome + 63
                  prespliceosome + 18
                  supraspliceosomal complex 4
                  trans spliceosomal complex 0
paths to the root