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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin silencing complex
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Accession:GO:0005677 term browser browse the term
Definition:Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing.


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chromatin silencing complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 ISO (PMID:19666599) RGD PMID:19666599 NCBI chr 3:110,708,790...110,732,038
Ensembl chr 3:110,723,481...110,732,060
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A ISO (MGI:MGI:3587127|PMID:16085498), (MGI:MGI:3852588|PMID:19578370) RGD PMID:16085498, PMID:19578370 MGI:MGI:3587127, MGI:MGI:3852588 NCBI chr 7:2,518,267...2,548,840
Ensembl chr 7:2,529,077...2,547,062
JBrowse link
G Eed embryonic ectoderm development ISO (MGI:MGI:5706660|PMID:26658965) RGD PMID:26658965 MGI:MGI:5706660 NCBI chr 1:154,189,252...154,216,340
Ensembl chr 1:154,189,260...154,216,340
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (MGI:MGI:5706660|PMID:26658965) RGD PMID:26658965 MGI:MGI:5706660 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Rrp8 ribosomal RNA processing 8 ISO
IBA
ISS
(PMID:18485871)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18485871, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:170,574,670...170,578,693
Ensembl chr 1:170,574,349...170,579,616
JBrowse link
G Sirt1 sirtuin 1 ISO
IEA
(PMID:18485871)
GO_REF:0000107
RGD
Ensembl
PMID:18485871 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 ISO (MGI:MGI:3587127|PMID:16085498) RGD PMID:16085498 MGI:MGI:3587127 NCBI chr19:30,936,703...30,969,454
Ensembl chr19:30,936,703...30,969,454
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 ISO (PMID:18485871)
(MGI:MGI:3688024|PMID:11788710)
RGD PMID:11788710, PMID:18485871 MGI:MGI:3688024 NCBI chr  X:146,532,002...146,533,538 JBrowse link
G Suv39h1l1 suppressor of variegation 3-9 homolog 1 (Drosophila)-like 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:15,171,280...15,185,191
Ensembl chr  X:15,171,499...15,185,191
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit ISO (MGI:MGI:5706660|PMID:26658965) RGD PMID:26658965 MGI:MGI:5706660 NCBI chr10:67,325,101...67,371,588
Ensembl chr10:67,325,347...67,369,668
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:MGI:5706660|PMID:26658965) RGD PMID:26658965 MGI:MGI:5706660 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6093
      chromatin silencing complex 11
        RENT complex 0
        chromatin lock complex 0
        eNoSc complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13258
        membrane-bounded organelle 11449
          intracellular membrane-bounded organelle 10704
            nucleus 7183
              chromatin silencing complex 11
                RENT complex 0
                chromatin lock complex 0
                eNoSc complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.