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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear pore
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Accession:GO:0005643 term browser browse the term
Definition:A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
Synonyms:exact_synonym: NPC;   nuclear pore complex;   nucleopore
 narrow_synonym: nuclear pore membrane protein
 alt_id: GO:0005644
 xref: NIF_Subcellular:sao220861693;   Wikipedia:Nuclear_pore


show annotations for term's descendants           Sort by:
nuclear pore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aaas aladin WD repeat nucleoporin part_of ISO
IBA		 (PMID:12730363)
GO_REF:0000033		 RGD
GO_Central		 PMID:12730363 GO_REF:0000033 NCBI chr 7:133,464,315...133,483,961
Ensembl chr 7:133,464,315...133,483,961 		JBrowse link
G Ahctf1 AT hook containing transcription factor 1 located_in ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:91,481,936...91,536,391
Ensembl chr13:91,481,936...91,536,391 		JBrowse link
G Bicd2 BICD cargo adaptor 2 part_of ISO (PMID:20386726) RGD PMID:20386726 NCBI chr17:15,259,773...15,304,889
Ensembl chr17:15,259,773...15,304,889 		JBrowse link
G Chmp1a charged multivesicular body protein 1A located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C located_in
part_of		 ISO
IEA		 (PMID:26040713)
GO_REF:0000107		 RGD
Ensembl		 PMID:26040713 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 located_in ISO (PMID:26040713) RGD PMID:26040713 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Eif5a eukaryotic translation initiation factor 5A part_of ISO (PMID:10381392) RGD PMID:10381392 NCBI chr10:54,640,104...54,644,845
Ensembl chr10:54,640,024...54,644,656 		JBrowse link
G Kpna4 karyopherin subunit alpha 4 part_of ISO (PMID:10100610) RGD PMID:10100610 NCBI chr 2:153,319,380...153,381,085
Ensembl chr 2:153,324,273...153,381,081 		JBrowse link
G Kpnb1 karyopherin subunit beta 1 IDA RGD PMID:9398662 RGD:9835011 NCBI chr10:82,145,662...82,174,437
Ensembl chr10:82,145,420...82,174,605 		JBrowse link
G Lbr lamin B receptor IDA RGD PMID:12438562 RGD:1600216 NCBI chr13:93,539,386...93,564,026
Ensembl chr13:93,538,920...93,564,017 		JBrowse link
G Mx2 MX dynamin like GTPase 2 part_of ISO (PMID:15184662) RGD PMID:15184662 NCBI chr11:36,905,698...36,936,308
Ensembl chr11:36,906,111...36,930,342 		JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin part_of ISO (PMID:16600873)
(PMID:24045954)		 RGD PMID:16600873 PMID:24045954 NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291 		JBrowse link
G Nup107 nucleoporin 107 part_of IDA
ISS
ISO		 PMID:11684705
(PMID:11564755), (PMID:11684705), (PMID:12802065), (PMID:15229283), (PMID:26411495)
GO_REF:0000024		 RGD
UniProt		 PMID:11564755 PMID:11684705 PMID:12802065 PMID:15229283 PMID:26411495 More... GO_REF:0000024, RGD:10401189, RGD:8553287 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370 		JBrowse link
G Nup133 nucleoporin 133 part_of ISO (PMID:11564755), (PMID:11684705), (PMID:17098863)
(PMID:18539113)		 RGD PMID:11564755 PMID:11684705 PMID:17098863 PMID:18539113 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Nup153 nucleoporin 153 part_of IDA
IBA
IEA
ISS
ISO		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000024
(PMID:12802065), (PMID:15229283)		 GO_Central
TreeGrafter
UniProt
RGD		 PMID:12802065 PMID:15229283 PMID:15703211 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118, RGD:7327145 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup160 nucleoporin 160 part_of ISO
IBA		 (PMID:11564755), (PMID:11684705), (PMID:17098863)
GO_REF:0000033
(MGI:3688013|PMID:11564755), (MGI:3690169|PMID:11684705)		 RGD
GO_Central		 PMID:11564755 PMID:11684705 PMID:17098863 GO_REF:0000033 MGI:3688013 MGI:3690169 NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565 		JBrowse link
G Nup205 nucleoporin 205 part_of ISO (PMID:12802065), (PMID:15229283) RGD PMID:12802065 PMID:15229283 NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844 		JBrowse link
G Nup210 nucleoporin 210 part_of TAS
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11453980 GO_REF:0000033, RGD:724456 NCBI chr 4:123,511,558...123,609,874
Ensembl chr 4:123,511,559...123,609,874 		JBrowse link
G Nup210l nucleoporin 210-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:175,545,999...175,665,332
Ensembl chr 2:175,547,988...175,665,332 		JBrowse link
G Nup42 nucleoporin 42 part_of IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:10,985,554...11,002,591
Ensembl chr 4:10,985,554...11,002,591 		JBrowse link
G Nup50 nucleoporin 50 part_of IDA
IEA
ISO		 GO_REF:0000044
(PMID:10891500)		 UniProt
RGD		 PMID:10891500 PMID:10891499 GO_REF:0000044, RGD:633381 NCBI chr 7:116,047,960...116,065,231
Ensembl chr 7:116,048,021...116,066,905 		JBrowse link
G Nup50-ps1 nucleoporin 50, pseudogene 1 part_of IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:128,787,567...128,789,296
Ensembl chr 4:128,787,100...128,789,312 		JBrowse link
G Nup54 nucleoporin 54 part_of IDA PMID:8707840
PMID:8589458		 UniProt
GO_Central		 PMID:8707840 PMID:8589458 RGD:633404, RGD:8553994 NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028 		JBrowse link
G Nup58 nucleoporin 58 part_of IDA
IBA
IEA		 PMID:8589458
GO_REF:0000033
PMID:8707840
GO_REF:0000044		 GO_Central
UniProt		 PMID:8589458 PMID:8707840 GO_REF:0000033 GO_REF:0000044, RGD:8553994, RGD:633404 NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060 		JBrowse link
G Nup62 nucleoporin 62 part_of IDA
ISO
ISS		 PMID:8589458
(PMID:1915419)
(PMID:1915414), (PMID:23777819)
GO_REF:0000024		 RGD
UniProt		 PMID:1915414 PMID:1915419 PMID:23777819 PMID:8589458 GO_REF:0000024, RGD:8553994 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Nup88 nucleoporin 88 part_of IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000117
(PMID:23777819), (PMID:30543681)		 GO_Central
UniProt
RGD		 PMID:23777819 PMID:30543681 PMID:9166401 GO_REF:0000033 GO_REF:0000117, RGD:633582 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257 		JBrowse link
G Nup93 nucleoporin 93 part_of ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000044
(PMID:12802065), (PMID:15229283)		 UniProt
GO_Central
RGD		 PMID:12802065 PMID:15229283 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor part_of IDA
ISO
ISS		 (PMID:12802065), (PMID:15229283), (PMID:9348540)
GO_REF:0000024		 RGD
UniProt		 PMID:9348540 PMID:12802065 PMID:15229283 PMID:7736573 GO_REF:0000024, RGD:70632 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Nxf1 nuclear RNA export factor 1 part_of IEA
ISO		 GO_REF:0000107
(PMID:11579093)		 Ensembl
RGD		 PMID:11579093 GO_REF:0000107 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 part_of ISO (PMID:11579093) RGD PMID:11579093 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Pom121 POM121 transmembrane nucleoporin part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter
RGD		 PMID:8335683 GO_REF:0000033 GO_REF:0000118, RGD:729484 NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294 		JBrowse link
G Pom121l2 POM121 transmembrane nucleoporin-like 2 part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:42,546,144...42,553,447
Ensembl chr17:42,546,326...42,553,423 		JBrowse link
G Rae1 ribonucleic acid export 1 part_of ISO
IEA
IBA		 (PMID:9256445)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107		 RGD
TreeGrafter
GO_Central
Ensembl		 PMID:9256445 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:161,779,096...161,794,048
Ensembl chr 3:161,779,088...161,794,038 		JBrowse link
G Ran RAN, member RAS oncogene family IDA RGD PMID:9398662 RGD:9835011 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276 		JBrowse link
G Ranbp1 RAN binding protein 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:82,742,603...82,750,836
Ensembl chr11:82,742,600...82,750,838 		JBrowse link
G Ranbp17 RAN binding protein 17 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,800,406...18,102,947
Ensembl chr10:17,800,999...18,102,831 		JBrowse link
G Ranbp1l1 RAN binding protein 1 like 1 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr11:64,646,634...64,647,446
Ensembl chr11:64,646,726...64,647,337 		JBrowse link
G Ranbp2 RAN binding protein 2 part_of IDA
IBA
ISO		 GO_REF:0000033
(PMID:17098863), (PMID:20386726)		 GO_Central
RGD		 PMID:17098863 PMID:20386726 PMID:9398662 GO_REF:0000033, RGD:9835011 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Ranbp3 RAN binding protein 3 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,507,233...1,544,460
Ensembl chr 9:1,507,361...1,544,460 		JBrowse link
G Ranbp3l RAN binding protein 3-like part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IDA RGD PMID:22811487 RGD:9835351 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component IDA RGD PMID:10087256 RGD:10413910 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Senp2 SUMO specific peptidase 2 part_of ISO
ISS		 (PMID:12192048)
GO_REF:0000024		 RGD
UniProt		 PMID:12192048 GO_REF:0000024 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Snupn snurportin 1 TAS RGD PMID:10209022 RGD:1331354 NCBI chr 8:57,347,412...57,388,345
Ensembl chr 8:57,348,130...57,380,912 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein part_of ISO
IBA
IEA
ISS		 (PMID:11514627), (PMID:12802065), (PMID:9828100), (PMID:9864356)
GO_REF:0000033
GO_REF:0000117
(MGI:5487541|PMID:12513910)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:9828100 PMID:9864356 PMID:11514627 PMID:12513910 PMID:12802065 GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 MGI:5487541 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
G Xpo4 exportin 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:31,717,016...31,807,723
Ensembl chr15:31,716,762...31,807,908 		JBrowse link
G Xpo7 exportin 7 part_of ISO
IBA		 (PMID:11024021)
GO_REF:0000033		 RGD
GO_Central		 PMID:11024021 GO_REF:0000033 NCBI chr15:45,742,053...45,828,050
Ensembl chr15:45,742,053...45,828,050 		JBrowse link
G Xpot exportin for tRNA located_in
part_of		 ISO
IBA		 (PMID:9660920)
GO_REF:0000033		 RGD
GO_Central		 PMID:9660920 GO_REF:0000033 NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099 		JBrowse link
cytoplasmic side of nuclear pore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup214 nucleoporin 214 located_in ISO (PMID:8108440) RGD PMID:8108440 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
nuclear pore central transport channel term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006740.1 part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 1:230,295,276...230,295,656 JBrowse link
G AABR07018058.1 part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr15:31,592,001...31,592,384 JBrowse link
G Nup35 nucleoporin 35 part_of IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130 		JBrowse link
G Nup54 nucleoporin 54 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028 		JBrowse link
G Nup62 nucleoporin 62 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Nup62cl nucleoporin 62 C-terminal like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,668,458...103,724,957
Ensembl chr  X:103,668,455...103,724,081 		JBrowse link
G Nutf2 nuclear transport factor 2 part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter
RGD		 PMID:10543952 GO_REF:0000033 GO_REF:0000118, RGD:9831376 NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Nxt2 nuclear transport factor 2-like export factor 2 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:105,855,616...105,862,902
Ensembl chr  X:105,855,608...105,862,899 		JBrowse link
nuclear pore cytoplasmic filaments term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gle1 GLE1 RNA export mediator part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379 		JBrowse link
G Gle1-ps1 GLE1 RNA export mediator, pseudogene 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:107,124,892...107,127,024
Ensembl chr 6:107,124,892...107,127,024
Ensembl chr 6:107,124,892...107,127,024 		JBrowse link
G Gle1l1 GLE1 RNA export mediator like 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:107,202,205...107,204,543
Ensembl chr 6:107,202,400...107,204,535 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Ranbp2 RAN binding protein 2 part_of IDA
ISO		 (PMID:7603572) RGD PMID:7603572 PMID:7775481 RGD:9835034 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IDA RGD PMID:8978815 RGD:9835354 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
nuclear pore inner ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup155 nucleoporin 155 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148 		JBrowse link
G Nup188 nucleoporin 188 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:13,559,917...13,616,313
Ensembl chr 3:13,559,990...13,616,307 		JBrowse link
G Nup205 nucleoporin 205 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844 		JBrowse link
nuclear pore nuclear basket term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cetn2 centrin 2 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr  X:150,769,944...150,774,833
Ensembl chr  X:150,769,953...150,774,919 		JBrowse link
G Cetn3 centrin 3 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr 2:12,089,025...12,101,828
Ensembl chr 2:12,089,226...12,101,828 		JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897 		JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 part_of ISO (PMID:18981471) RGD PMID:18981471 NCBI chr12:14,320,892...14,630,750
Ensembl chr12:14,320,892...14,630,703 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 part_of ISO (PMID:18981471) RGD PMID:18981471 NCBI chr 4:95,906,692...95,918,885
Ensembl chr 4:95,906,817...95,913,470 		JBrowse link
G Mcm3ap minichromosome maintenance complex component 3 associated protein part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165 		JBrowse link
G Nup153 nucleoporin 153 part_of ISO
IEA
IDA		 (PMID:11839768)
GO_REF:0000107		 RGD
Ensembl		 PMID:11839768 PMID:11839768 GO_REF:0000107, RGD:8553300 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup35 nucleoporin 35 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor part_of ISO
IDA		 (PMID:11839768) RGD PMID:11839768 PMID:11839768 RGD:8553300 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Pcid2 PCI domain containing 2 part_of ISO (PMID:23591820) RGD PMID:23591820 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712 		JBrowse link
G Ranbp2 RAN binding protein 2 part_of ISO (PMID:11839768) RGD PMID:11839768 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein part_of ISO
IEA
IDA		 (PMID:11839768), (PMID:15229283), (PMID:18981471), (PMID:9024684)
GO_REF:0000107		 RGD
Ensembl		 PMID:9024684 PMID:11839768 PMID:15229283 PMID:18981471 PMID:11839768 GO_REF:0000107, RGD:8553300 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
nuclear pore outer ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT hook containing transcription factor 1 located_in ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:91,481,936...91,536,391
Ensembl chr13:91,481,936...91,536,391 		JBrowse link
G Nup107 nucleoporin 107 part_of ISO
IEA
IBA
ISS		 (PMID:17360435)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
TreeGrafter
GO_Central
Ensembl
UniProt		 PMID:17360435 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370 		JBrowse link
G Nup133 nucleoporin 133 part_of ISO
IBA		 (PMID:15146057), (PMID:17360435)
GO_REF:0000033		 RGD
GO_Central		 PMID:15146057 PMID:17360435 GO_REF:0000033 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Nup160 nucleoporin 160 part_of ISO (PMID:17360435) RGD PMID:17360435 NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565 		JBrowse link
G Nup37 nucleoporin 37 part_of ISO
IBA		 (PMID:15146057), (PMID:17360435)
GO_REF:0000033		 RGD
GO_Central		 PMID:15146057 PMID:17360435 GO_REF:0000033 NCBI chr 7:22,556,544...22,609,622
Ensembl chr 7:22,573,764...22,609,616 		JBrowse link
G Nup43 nucleoporin 43 part_of ISO
IBA		 (PMID:17360435)
GO_REF:0000033		 RGD
GO_Central		 PMID:17360435 GO_REF:0000033 NCBI chr 1:2,144,427...2,157,887
Ensembl chr 1:2,148,043...2,158,186 		JBrowse link
G Nup85 nucleoporin 85 part_of ISO
IBA
IEA
ISS		 (PMID:15146057), (PMID:17360435)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:15146057 PMID:17360435 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor part_of ISS
ISO		 GO_REF:0000024
(PMID:17360435)		 UniProt
RGD		 PMID:17360435 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component part_of ISS
IEA
IBA
ISO		 GO_REF:0000024
GO_REF:0000118
GO_REF:0000033
(PMID:17360435)		 UniProt
TreeGrafter
GO_Central
RGD		 PMID:17360435 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Sec13-ps2 SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 2 part_of IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr18:967,396...968,674
Ensembl chr18:967,394...968,680
Ensembl chr18:967,394...968,680 		JBrowse link
G Seh1l SEH1-like nucleoporin part_of ISO (PMID:17360435) RGD PMID:17360435 NCBI chr18:61,346,986...61,369,987 JBrowse link
nuclear pore transmembrane ring term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc1 NDC1 transmembrane nucleoporin part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291 		JBrowse link
nucleoplasmic side of nuclear pore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup153 nucleoporin 153 IDA RGD PMID:8422679 RGD:729043 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21254
    protein-containing complex 6911
      nuclear protein-containing complex 1373
        nuclear pore 79
          cytoplasmic side of nuclear pore 1
          nuclear pore central transport channel 9
          nuclear pore cytoplasmic filaments 6
          nuclear pore inner ring 3
          nuclear pore linkers 0
          nuclear pore nuclear basket 12
          nuclear pore outer ring 11
          nuclear pore transmembrane ring 1
          nucleoplasmic side of nuclear pore 1
Path 2
Term Annotations click to browse term
  cellular_component 21254
    cellular anatomical entity 21098
      organelle 14217
        membrane-bounded organelle 12815
          intracellular membrane-bounded organelle 12228
            nucleus 7659
              nuclear protein-containing complex 1373
                nuclear pore 79
                  cytoplasmic side of nuclear pore 1
                  nuclear pore central transport channel 9
                  nuclear pore cytoplasmic filaments 6
                  nuclear pore inner ring 3
                  nuclear pore linkers 0
                  nuclear pore nuclear basket 12
                  nuclear pore outer ring 11
                  nuclear pore transmembrane ring 1
                  nucleoplasmic side of nuclear pore 1
paths to the root