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ONTOLOGY REPORT - ANNOTATIONS


Term:glycosaminoglycan binding
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Accession:GO:0005539 term browser browse the term
Definition:Binding to a glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues.


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glycosaminoglycan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030903.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:108,469,856...108,473,377 JBrowse link
G Abi3bp ABI family member 3 binding protein enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Bgn biglycan enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:157,319,042...157,331,204
Ensembl chr  X:157,319,046...157,331,204
JBrowse link
G Ccdc80 coiled-coil domain containing 80 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:60,645,660...60,679,249
Ensembl chr11:60,645,086...60,679,555
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 enables IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr19:52,647,038...52,705,118
Ensembl chr19:52,647,070...52,705,131
JBrowse link
G Dcn decorin enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 7:38,742,250...38,782,282
Ensembl chr 7:38,742,051...38,782,323
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains enables IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr 2:56,503,002...56,681,334
Ensembl chr 2:56,502,807...56,679,955
JBrowse link
G Eng endoglin enables IBA
ISO
PMID:21873635
(PMID:8294451)
(PMID:3262645)
RGD PMID:3262645 PMID:8294451, PMID:21873635 RGD:13792537 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 enables ISO (MGI:5882911|PMID:12562774) RGD PMID:12562774 MGI:5882911 NCBI chr 2:218,951,112...218,972,576
Ensembl chr 2:218,951,141...218,971,886
JBrowse link
G Gns glucosamine (N-acetyl)-6-sulfatase enables IPI
IBA
PMID:21873635 RGD
GO_Central
PMID:3161730, PMID:21873635 RGD:1600571, RGD:13792537 NCBI chr 7:63,467,027...63,501,054
Ensembl chr 7:63,467,216...63,499,353
Ensembl chr 7:63,467,216...63,499,353
JBrowse link
G Mamdc2 MAM domain containing 2 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:241,071,110...241,223,798
Ensembl chr 1:241,072,072...241,155,537
JBrowse link
G Ndnf neuron-derived neurotrophic factor enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Prnp prion protein enables ISO (MGI:3714552|PMID:17573534) RGD PMID:17573534 MGI:3714552 NCBI chr 3:124,515,917...124,531,320
Ensembl chr 3:124,515,978...124,531,316
JBrowse link
G Ptn pleiotrophin IDA RGD PMID:7925491 RGD:9834943 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,689,608...3,691,164 JBrowse link
G Serpine2 serpin family E member 2 enables ISO (PMID:19855083) RGD PMID:19855083 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Shh sonic hedgehog signaling molecule enables IEA
ISO
GO_REF:0000107
(MGI:2149274|PMID:11476578)
Ensembl
RGD
PMID:11476578 GO_REF:0000107 MGI:2149274 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:29,654,926...29,679,927
Ensembl chr20:29,655,226...29,677,926
JBrowse link
G Spock3 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 3 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr16:28,372,067...28,716,762
Ensembl chr16:28,372,411...28,716,885
JBrowse link
G Sulf1 sulfatase 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
G Sulf2 sulfatase 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 enables ISO (PMID:7852346) RGD PMID:7852346 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 enables TAS
ISO
IBA
PMID:1333192
(MGI:2663364|PMID:12773577)
PMID:21873635
RGD PMID:12773577, PMID:1333192, PMID:21873635 MGI:2663364, RGD:8554613, RGD:13792537 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tgfbr3l transforming growth factor beta receptor 3 like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,540,494...2,545,315
Ensembl chr12:2,542,612...2,545,740
JBrowse link
G Vit vitrin enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:1,091,817...1,208,888
Ensembl chr 6:1,147,012...1,208,392
JBrowse link
chondroitin sulfate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin enables ISS
ISO
GO_REF:0000024
(MGI:5486565|PMID:12773545)
UniProt
RGD
PMID:12773545 GO_REF:0000024 MGI:5486565 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Anxa6 annexin A6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,320,581...40,375,605
Ensembl chr10:40,320,581...40,375,605
JBrowse link
G Dpysl3 dihydropyrimidinase-like 3 IDA RGD PMID:12444086 RGD:1298811 NCBI chr18:37,716,371...37,819,347
Ensembl chr18:37,716,143...37,819,097
JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:87,733,374...87,879,958
Ensembl chr 8:87,733,545...87,879,888
JBrowse link
G Mdk midkine enables ISS
ISO
GO_REF:0000024
(MGI:6294191|PMID:10978312)
UniProt
RGD
PMID:10978312 GO_REF:0000024 MGI:6294191 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Ptn pleiotrophin enables ISO (PMID:26896299) RGD PMID:26896299 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5461303|PMID:22406547)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22406547 GO_REF:0000024 GO_REF:0000107 MGI:5461303 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Rtn4r reticulon 4 receptor enables ISS
ISO
GO_REF:0000024
(MGI:5461303|PMID:22406547)
UniProt
RGD
PMID:22406547 GO_REF:0000024 MGI:5461303 NCBI chr11:86,992,665...87,017,091
Ensembl chr11:86,992,399...87,017,115
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 enables ISS
ISO
GO_REF:0000024
(MGI:5461303|PMID:22406547)
UniProt
RGD
PMID:22406547 GO_REF:0000024 MGI:5461303 NCBI chr10:62,035,866...62,109,075
Ensembl chr10:62,035,866...62,109,078
JBrowse link
chondroitin sulfate proteoglycan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptn pleiotrophin IPI RGD PMID:20369290 RGD:9831444 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F enables IEA
ISO
GO_REF:0000107
PR:Q62059 (MGI:5294249|PMID:21976490)
Ensembl
RGD
PMID:21976490 GO_REF:0000107 MGI:5294249 NCBI chr 5:137,036,936...137,112,930
Ensembl chr 5:137,036,935...137,112,927
JBrowse link
G Sema5a semaphorin 5A enables IMP PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
heparan sulfate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a1 collagen type XI alpha 1 chain IDA RGD PMID:17062562 RGD:1600882 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 enables ISO (PMID:19189310) RGD PMID:19189310 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Mdk midkine enables ISO
ISS
(PMID:12084985)
GO_REF:0000024
RGD
UniProt
PMID:12084985 GO_REF:0000024 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Ppia peptidylprolyl isomerase A enables ISS
ISO
GO_REF:0000024
(PMID:11943775)
UniProt
RGD
PMID:11943775 GO_REF:0000024 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:22,706,906...22,707,648
Ensembl chr14:22,706,901...22,707,668
JBrowse link
G Ptn pleiotrophin IPI RGD PMID:8567685 RGD:9834944 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
heparin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034648.1 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr11:82,680,253...82,730,832 JBrowse link
G AABR07060833.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:96,562,725...96,564,611 JBrowse link
G Aamp angio-associated, migratory cell protein enables ISO (PMID:7743515) RGD PMID:7743515 NCBI chr 9:81,560,836...81,566,642
Ensembl chr 9:81,560,842...81,566,642
JBrowse link
G Abi3bp ABI family member 3 binding protein enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:46,206,932...46,422,791
Ensembl chr11:46,208,075...46,369,577
JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 enables IEA
ISO
GO_REF:0000107
(MGI:1335998|PMID:9593739), (MGI:85039|PMID:8995297)
Ensembl
RGD
PMID:8995297 PMID:9593739 GO_REF:0000107 MGI:1335998 MGI:85039 NCBI chr11:25,342,119...25,350,938
Ensembl chr11:25,342,126...25,350,974
JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 enables ISO (MGI:5554640|PMID:24220035) RGD PMID:24220035 MGI:5554640 NCBI chr 8:31,977,001...32,000,378
Ensembl chr 8:31,977,001...32,000,378
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 enables ISO (MGI:5554640|PMID:24220035) RGD PMID:24220035 MGI:5554640 NCBI chr11:25,411,174...25,456,639
Ensembl chr11:25,410,975...25,456,836
JBrowse link
G Adamtsl5 ADAMTS-like 5 enables ISO (PMID:23010571) RGD PMID:23010571 NCBI chr 7:12,228,706...12,237,382
Ensembl chr 7:12,229,379...12,234,576
JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 enables IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5780347|PMID:27068534)
PMID:21873635
GO_REF:0000024
(PMID:27068534)
Ensembl
RGD
UniProt
PMID:27068534, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5780347, RGD:13792537 NCBI chr19:10,423,534...10,460,674
Ensembl chr19:10,423,501...10,460,674
JBrowse link
G Ager advanced glycosylation end product-specific receptor enables ISO (MGI:3522395|PMID:15381690) RGD PMID:15381690 MGI:3522395 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Ang angiogenin enables ISO (PMID:10103013) RGD PMID:10103013 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Aoc1 amine oxidase, copper containing 1 enables ISO
ISS
(PMID:12072962), (PMID:19764817)
GO_REF:0000024
RGD
UniProt
PMID:12072962 PMID:19764817 GO_REF:0000024 NCBI chr 4:78,496,043...78,515,582
Ensembl chr 4:78,496,043...78,515,584
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:88,897,525...88,908,750
Ensembl chr 1:88,897,532...88,908,750
JBrowse link
G Aplp2 amyloid beta precursor like protein 2 enables IEA GO_REF:0000104
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 8:32,298,526...32,328,821
Ensembl chr 8:32,298,532...32,328,839
JBrowse link
G Apoa5 apolipoprotein A5 enables ISO
IEA
(PMID:15878877), (PMID:17326667)
GO_REF:0000107
RGD
Ensembl
PMID:15878877 PMID:17326667 GO_REF:0000107 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apob apolipoprotein B enables ISO (PMID:16233946) RGD PMID:16233946 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoe apolipoprotein E enables ISO
ISS
IEA
(PMID:2745454), (PMID:7635945)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:2745454 PMID:7635945 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apoh apolipoprotein H enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:96,640,013...96,653,939
Ensembl chr10:96,639,924...96,653,938
JBrowse link
G App amyloid beta precursor protein enables IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Bmp4 bone morphogenetic protein 4 enables IEA
ISO
GO_REF:0000107
(MGI:3525426|PMID:15381701)
Ensembl
RGD
PMID:15381701 GO_REF:0000107 MGI:3525426 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 IDA RGD PMID:12927798 RGD:737843 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bsph1 binder of sperm protein homolog 1 enables IBA
ISO
PMID:21873635
(MGI:5465085|PMID:22539676)
RGD PMID:22539676, PMID:21873635 MGI:5465085, RGD:13792537 NCBI chr 1:75,705,172...75,793,950
Ensembl chr 1:75,748,916...75,789,785
JBrowse link
G Bsph2 binder of sperm protein homolog 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:75,837,911...75,849,781
Ensembl chr 1:75,842,073...75,849,658
JBrowse link
G Ccdc80 coiled-coil domain containing 80 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:60,645,660...60,679,249
Ensembl chr11:60,645,086...60,679,555
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IPI RGD PMID:16127145 RGD:2303093 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IDA RGD PMID:21052646 RGD:4889872 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:69,423,083...69,424,933
Ensembl chr10:69,423,086...69,424,979
JBrowse link
G Ccn1 cellular communication network factor 1 enables TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:11897702, PMID:21873635 RGD:727633, RGD:13792537 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn2 cellular communication network factor 2 enables TAS
ISO
IBA
(MGI:707922|PMID:9184077)
PMID:21873635
RGD PMID:9184077, PMID:12193543, PMID:21873635 MGI:707922, RGD:628364, RGD:13792537 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Ccn3 cellular communication network factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:94,375,134...94,382,154
Ensembl chr 7:94,375,020...94,383,024
JBrowse link
G Ccn4 cellular communication network factor 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Ccn5 cellular communication network factor 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:160,207,969...160,219,316
Ensembl chr 3:160,207,913...160,219,331
JBrowse link
G Ccn6 cellular communication network factor 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,237,491...44,255,064
Ensembl chr20:44,237,491...44,255,064
JBrowse link
G Cfh complement factor H enables ISO (PMID:22471560)
(MGI:3613281|PMID:16023208), (MGI:3692807|PMID:17028856)
RGD PMID:16023208 PMID:17028856 PMID:22471560 MGI:3613281 MGI:3692807 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Cfhr2 complement factor H-related 2 enables ISO (MGI:3692807|PMID:17028856) RGD PMID:17028856 MGI:3692807 NCBI chr13:56,641,657...56,713,305
Ensembl chr13:56,642,365...56,693,968
JBrowse link
G Chrd chordin enables ISO (MGI:3525426|PMID:15381701) RGD PMID:15381701 MGI:3525426 NCBI chr11:83,858,503...83,867,543
Ensembl chr11:83,858,503...83,867,203
JBrowse link
G Clec3b C-type lectin domain family 3, member B enables ISS
ISO
GO_REF:0000024
(PMID:10727405)
UniProt
RGD
PMID:10727405 GO_REF:0000024 NCBI chr 8:132,241,016...132,248,066
Ensembl chr 8:132,241,134...132,246,694
JBrowse link
G Col11a1 collagen type XI alpha 1 chain IDA RGD PMID:17062562 RGD:1600882 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain enables ISO
IBA
(PMID:11956183)
PMID:21873635
RGD PMID:11956183, PMID:21873635 RGD:13792537 NCBI chr20:31,456,502...31,598,360
Ensembl chr20:31,456,852...31,598,118
JBrowse link
G Col23a1 collagen type XXIII alpha 1 chain IPI RGD PMID:12644459 RGD:1299589 NCBI chr10:34,846,618...34,934,991
Ensembl chr10:34,903,343...34,933,539
JBrowse link
G Col25a1 collagen type XXV alpha 1 chain enables ISO (PMID:15522881) RGD PMID:15522881 NCBI chr 2:235,515,364...235,705,448
Ensembl chr 2:235,596,123...235,715,057
JBrowse link
G Col5a1 collagen type V alpha 1 chain enables IDA
IBA
ISO
IEA
PMID:21873635
(PMID:2203476)
GO_REF:0000107
RGD
Ensembl
PMID:2203476, PMID:10852920, PMID:21873635 GO_REF:0000107, RGD:70693, RGD:13792537 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a3 collagen type V alpha 3 chain enables ISO (MGI:3583053|PMID:15908193) RGD PMID:15908193 MGI:3583053 NCBI chr 8:21,786,324...21,831,751
Ensembl chr 8:21,786,324...21,831,668
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12684510, PMID:21873635 RGD:728369, RGD:13792537 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Comp cartilage oligomeric matrix protein enables IEA
ISO
GO_REF:0000107
(PMID:17588949)
Ensembl
RGD
PMID:17588949 GO_REF:0000107 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr19:52,647,038...52,705,118
Ensembl chr19:52,647,070...52,705,131
JBrowse link
G Ctsg cathepsin G enables ISO (PMID:11907569) RGD PMID:11907569 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 enables ISO (PMID:18645041) RGD PMID:18645041 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 enables ISO (PMID:18645041) RGD PMID:18645041 NCBI chr14:17,195,395...17,198,170
Ensembl chr14:17,195,014...17,198,291
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 enables ISO (PMID:11708770) RGD PMID:11708770 NCBI chr14:15,253,146...15,258,221
Ensembl chr14:15,253,125...15,258,207
JBrowse link
G Defb15 defensin beta 15 enables ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
JBrowse link
G Ecm2 extracellular matrix protein 2 enables ISO
IBA
(MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr17:15,533,760...15,566,403
Ensembl chr17:15,533,972...15,566,332
JBrowse link
G Efemp2 EGF containing fibulin extracellular matrix protein 2 enables ISO (PMID:23782690) RGD PMID:23782690 NCBI chr 1:220,853,695...220,861,420
Ensembl chr 1:220,854,403...220,861,420
JBrowse link
G Elane elastase, neutrophil expressed enables ISO (PMID:11907569) RGD PMID:11907569 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G Eva1c eva-1 homolog C enables IBA
ISO
PMID:21873635
(PMID:19470522)
RGD PMID:19470522, PMID:21873635 RGD:13792537 NCBI chr11:31,001,697...31,075,784
Ensembl chr11:31,002,451...31,075,809
JBrowse link
G F2 coagulation factor II enables IEA
ISO
GO_REF:0000107
(PMID:20421939)
Ensembl
RGD
PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Fbln7 fibulin 7 enables ISO (MGI:6279558|PMID:29730503) RGD PMID:29730503 MGI:6279558 NCBI chr 3:121,407,981...121,441,660
Ensembl chr 3:121,408,146...121,440,787
JBrowse link
G Fbn1 fibrillin 1 enables ISO (PMID:11461921) RGD PMID:11461921 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fgf1 fibroblast growth factor 1 enables ISO
ISS
(PMID:18441324), (PMID:20145243)
GO_REF:0000024
RGD
UniProt
PMID:18441324 PMID:20145243 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fgf10 fibroblast growth factor 10 enables ISS
ISO
GO_REF:0000024
(PMID:11923311)
UniProt
RGD
PMID:11923311 GO_REF:0000024 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf12 fibroblast growth factor 12 enables ISO (PMID:12815063) RGD PMID:12815063 NCBI chr11:75,606,360...76,171,078
Ensembl chr11:75,905,443...76,168,989
JBrowse link
G Fgf14 fibroblast growth factor 14 enables ISO (PMID:12815063) RGD PMID:12815063 NCBI chr15:110,382,274...111,077,027
Ensembl chr15:110,385,217...110,612,681
JBrowse link
G Fgf2 fibroblast growth factor 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf7 fibroblast growth factor 7 IDA RGD PMID:9843417 RGD:2289271 NCBI chr 3:118,315,859...118,368,464
Ensembl chr 3:118,317,761...118,366,872
JBrowse link
G Fgf9 fibroblast growth factor 9 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfbp3 fibroblast growth factor binding protein 3 enables ISO (PMID:18669637) RGD PMID:18669637 NCBI chr 1:255,555,050...255,557,055
Ensembl chr 1:255,555,050...255,557,055
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18480409)
UniProt
Ensembl
RGD
PMID:18480409 GO_REF:0000024 GO_REF:0000107 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 enables ISO
ISS
(PMID:18480409)
GO_REF:0000024
RGD
UniProt
PMID:18480409 GO_REF:0000024 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Fgfrl1 fibroblast growth factor receptor-like 1 enables ISO (PMID:12813049), (PMID:18061161) RGD PMID:12813049 PMID:18061161 NCBI chr14:2,020,110...2,032,169
Ensembl chr14:2,018,500...2,032,593
JBrowse link
G Fn1 fibronectin 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fstl1 follistatin-like 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:65,791,196...65,845,721
Ensembl chr11:65,782,567...65,845,418
JBrowse link
G Gpnmb glycoprotein nmb enables ISO (PMID:19350579)
(MGI:1931898|PMID:11114299)
RGD PMID:11114299 PMID:19350579 MGI:1931898 NCBI chr 4:78,694,447...78,715,685
Ensembl chr 4:78,694,447...78,715,683
JBrowse link
G Grem2 gremlin 2, DAN family BMP antagonist enables ISO (MGI:5543884|PMID:23850456) RGD PMID:23850456 MGI:5543884 NCBI chr13:92,894,431...92,988,137
Ensembl chr13:92,894,431...92,988,137
JBrowse link
G H1f1 H1.1 linker histone, cluster member enables ISO (MGI:5882919|PMID:9664069) RGD PMID:9664069 MGI:5882919 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G Hbegf heparin-binding EGF-like growth factor enables IBA
ISO
PMID:21873635
(MGI:3690187|PMID:1840698)
(PMID:8300582)
RGD PMID:1840698 PMID:8300582, PMID:21873635 MGI:3690187, RGD:13792537 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
G Hdgf heparin binding growth factor enables
NOT|enables
ISO
ISS
(PMID:26845719)
GO_REF:0000024
RGD
UniProt
PMID:26845719 GO_REF:0000024 NCBI chr 2:187,274,898...187,284,670
Ensembl chr 2:187,275,120...187,284,281
JBrowse link
G Hmgb1 high mobility group box 1 TAS
IDA
RGD PMID:1885601, PMID:11279268 RGD:728426, RGD:734534 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hrg histidine-rich glycoprotein enables ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:16436387), (PMID:21304106)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16436387 PMID:21304106, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:82,924,699...83,048,465
Ensembl chr 3:82,924,687...83,048,435
JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 enables ISS
IEA
GO_REF:0000024
GO_REF:0000043
UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr 8:87,733,374...87,879,958
Ensembl chr 8:87,733,545...87,879,888
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 enables IEA
ISO
IBA
GO_REF:0000107
(MGI:3044445|PMID:15044457)
PMID:21873635
Ensembl
RGD
PMID:15044457, PMID:21873635 GO_REF:0000107 MGI:3044445, RGD:13792537 NCBI chr11:46,615,091...46,693,565
Ensembl chr11:46,615,200...46,693,565
JBrowse link
G Itgam integrin subunit alpha M enables ISO (MGI:67785|PMID:8043862) RGD PMID:8043862 MGI:67785 NCBI chr 1:199,495,312...199,545,738
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Lamc2 laminin subunit gamma 2 enables ISO (MGI:2156955|PMID:11733994) RGD PMID:11733994 MGI:2156955 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lgr6 leucine-rich repeat-containing G protein-coupled receptor 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,811,904...51,931,193
Ensembl chr13:51,815,215...51,930,972
JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:10681410 RGD:2307450 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lipg lipase G, endothelial type enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Liph lipase H enables ISO (PMID:12963729) RGD PMID:12963729 NCBI chr11:82,680,167...82,732,145 JBrowse link
G Lipi lipase I enables ISO (PMID:12963729) RGD PMID:12963729 NCBI chr11:13,960,246...13,999,869
Ensembl chr11:13,960,246...13,999,862
JBrowse link
G LOC100360057 ribosomal protein L22-like enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:118,705,191...118,705,687
Ensembl chr 5:169,506,138...169,512,871
Ensembl chr 4:169,506,138...169,512,871
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein enables ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Lpl lipoprotein lipase enables ISS
ISO
GO_REF:0000024
(PMID:11342582), (PMID:12573449), (PMID:2110364)
UniProt
RGD
PMID:2110364 PMID:11342582 PMID:12573449 GO_REF:0000024 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:80,911,281...80,923,290
Ensembl chr14:80,911,270...80,924,831
JBrowse link
G Lrtm1 leucine-rich repeats and transmembrane domains 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:4,993,728...5,005,110
Ensembl chr16:4,997,461...5,003,066
JBrowse link
G Lrtm2 leucine-rich repeats and transmembrane domains 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:151,375,568...151,397,485
Ensembl chr 4:151,375,572...151,390,263
JBrowse link
G Ltbp2 latent transforming growth factor beta binding protein 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:108,500,114...108,596,653
Ensembl chr 6:108,500,112...108,596,569
JBrowse link
G Ltf lactotransferrin enables ISO (PMID:11907569) RGD PMID:11907569 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Lxn latexin enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:164,628,565...164,634,434
Ensembl chr 2:164,628,566...164,634,434
JBrowse link
G Mcpt4 mast cell protease 4 IDA RGD PMID:11896050 RGD:633287 NCBI chr15:34,751,550...34,754,409
Ensembl chr15:34,751,550...34,796,223
JBrowse link
G Mdk midkine enables ISS
ISO
GO_REF:0000024
(MGI:6294191|PMID:10978312)
(PMID:9384573)
UniProt
RGD
PMID:9384573 PMID:10978312 GO_REF:0000024 MGI:6294191 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mmp7 matrix metallopeptidase 7 IDA RGD PMID:10660581 RGD:9685351 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
G Mpig6b megakaryocyte and platelet inhibitory receptor G6b enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:5,054,419...5,056,655
Ensembl chr20:5,054,583...5,056,488
JBrowse link
G Mpo myeloperoxidase enables ISO (PMID:11907569) RGD PMID:11907569 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260
JBrowse link
G Mstn myostatin enables ISO (MGI:5805364|PMID:19644449), (MGI:5905208|PMID:28257634) RGD PMID:19644449 PMID:28257634 MGI:5805364 MGI:5905208 NCBI chr 9:53,310,977...53,315,804
Ensembl chr 9:53,309,598...53,315,915
JBrowse link
G Nav2 neuron navigator 2 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:104,575,765...104,941,554
Ensembl chr 1:104,576,589...104,941,552
JBrowse link
G Ncam1 neural cell adhesion molecule 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:53,836,797...54,134,881
Ensembl chr 8:53,839,098...53,901,358
JBrowse link
G Ndnf neuron-derived neurotrophic factor enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Nell1 neural EGFL like 1 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10548494, PMID:21873635 RGD:633407, RGD:13792537 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Nell2 neural EGFL like 2 enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10548494, PMID:21873635 RGD:633407, RGD:13792537 NCBI chr 7:136,526,497...136,853,820
Ensembl chr 7:136,526,496...136,853,957
JBrowse link
G Nrp1 neuropilin 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Nrp2 neuropilin 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087
JBrowse link
G Pcolce procollagen C-endopeptidase enhancer enables IEA
ISO
GO_REF:0000002
(PMID:12393877)
InterPro
RGD
PMID:12393877 GO_REF:0000002 NCBI chr12:22,153,995...22,160,311
Ensembl chr12:22,153,983...22,160,337
JBrowse link
G PCOLCE2 procollagen C-endopeptidase enhancer 2 enables ISO (PMID:12393877) RGD PMID:12393877 NCBI chr 8:103,459,219...103,484,557
Ensembl chr 8:103,459,161...103,484,535
JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 enables ISO
IEA
(PMID:12535616)
GO_REF:0000107
RGD
Ensembl
PMID:12535616 GO_REF:0000107 NCBI chr 1:126,749,508...126,947,392
Ensembl chr 1:126,749,508...126,947,392
JBrowse link
G Pdcd5 programmed cell death 5 enables ISO (PMID:17165023) RGD PMID:17165023 NCBI chr 1:91,173,473...91,178,801
Ensembl chr 1:91,173,473...91,178,801
Ensembl chr 1:91,173,473...91,178,801
JBrowse link
G Pf4 platelet factor 4 enables ISO
ISS
(PMID:9531587)
GO_REF:0000024
RGD
UniProt
PMID:9531587 GO_REF:0000024 NCBI chr14:18,848,549...18,849,258
Ensembl chr14:18,848,549...18,849,258
JBrowse link
G Pla2g2d phospholipase A2, group IID enables ISO (MGI:3851856|PMID:19564598) RGD PMID:19564598 MGI:3851856 NCBI chr 5:157,222,636...157,228,795
Ensembl chr 5:157,222,636...157,228,791
JBrowse link
G Pla2g5 phospholipase A2, group V IDA RGD PMID:9603953 RGD:2303038 NCBI chr 5:157,247,601...157,268,968
Ensembl chr 5:157,247,781...157,268,903
JBrowse link
G Postn periostin enables ISO (MGI:3687423|PMID:7663166) RGD PMID:7663166 MGI:3687423 NCBI chr 2:143,656,820...143,688,087
Ensembl chr 2:143,656,793...143,688,087
JBrowse link
G Prelp proline and arginine rich end leucine rich repeat protein enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11007795, PMID:21873635 RGD:727301, RGD:13792537 NCBI chr13:50,749,526...50,773,934
Ensembl chr13:50,749,514...50,761,355
JBrowse link
G Prg2 proteoglycan 2 NAS RGD PMID:11319227 RGD:1302346 NCBI chr 3:72,385,678...72,389,245
Ensembl chr 3:72,385,666...72,389,276
JBrowse link
G Prss34 protease, serine, 34 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:14,656,812...14,658,569
Ensembl chr10:14,656,812...14,658,569
JBrowse link
G Prss57 serine protease 57 enables ISS
ISO
GO_REF:0000024
(PMID:25156428)
UniProt
RGD
PMID:25156428 GO_REF:0000024 NCBI chr 7:12,798,310...12,804,668
Ensembl chr 7:12,798,868...12,804,283
JBrowse link
G Ptch1 patched 1 enables ISO (MGI:3687672|PMID:10500113) RGD PMID:10500113 MGI:3687672 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ptn pleiotrophin enables IPI
ISO
IDA
(PMID:1733956)
porcine heparin
RGD PMID:1733956, PMID:8567685, PMID:16226713 RGD:9834944, RGD:9834996 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C enables ISO (MGI:67785|PMID:8043862) RGD PMID:8043862 MGI:67785 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:137,036,936...137,112,930
Ensembl chr 5:137,036,935...137,112,927
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5461303|PMID:22406547)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22406547 GO_REF:0000024 GO_REF:0000107 MGI:5461303 NCBI chr 9:10,585,360...10,646,205
Ensembl chr 9:10,603,813...10,645,939
JBrowse link
G Reg4 regenerating family member 4 enables ISO (PMID:20692269) RGD PMID:20692269 NCBI chr 2:200,395,253...200,410,009
Ensembl chr 2:200,397,967...200,409,528
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,689,608...3,691,164 JBrowse link
G RGD1564614 similar to complement factor H-related protein enables ISO (MGI:3692807|PMID:17028856) RGD PMID:17028856 MGI:3692807 NCBI chr13:56,889,669...56,958,549
Ensembl chr13:56,889,669...56,958,561
JBrowse link
G Rpl22 ribosomal protein L22 enables ISO (MGI:65237|PMID:8135813) RGD PMID:8135813 MGI:65237 NCBI chr 5:169,506,150...169,512,875
Ensembl chr 5:169,506,138...169,512,871
JBrowse link
G Rpl29 ribosomal protein L29 enables ISO (MGI:1289857|PMID:9737974) RGD PMID:9737974 MGI:1289857 NCBI chr 8:115,131,228...115,133,401
Ensembl chr 8:115,131,367...115,133,401
JBrowse link
G Rspo1 R-spondin 1 enables ISO (MGI:3664518|PMID:16543246) RGD PMID:16543246 MGI:3664518 NCBI chr 5:142,986,526...143,007,847
Ensembl chr 5:142,986,526...143,007,831
JBrowse link
G Rspo2 R-spondin 2 enables ISO (MGI:3664518|PMID:16543246), (MGI:3774879|PMID:18256198) RGD PMID:16543246 PMID:18256198 MGI:3664518 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Rspo3 R-spondin 3 enables ISO (MGI:3664518|PMID:16543246) RGD PMID:16543246 MGI:3664518 NCBI chr 1:30,681,648...30,768,038
Ensembl chr 1:30,681,681...30,766,860
JBrowse link
G Rspo4 R-spondin 4 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:147,358,690...147,391,719
Ensembl chr 3:147,358,858...147,389,698
JBrowse link
G Rtn4r reticulon 4 receptor enables ISS
ISO
IBA
GO_REF:0000024
(MGI:5461303|PMID:22406547)
PMID:21873635
UniProt
RGD
PMID:22406547, PMID:21873635 GO_REF:0000024 MGI:5461303, RGD:13792537 NCBI chr11:86,992,665...87,017,091
Ensembl chr11:86,992,399...87,017,115
JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 enables IBA
ISO
ISS
PMID:21873635
(MGI:5461303|PMID:22406547)
GO_REF:0000024
RGD
UniProt
PMID:22406547, PMID:21873635 GO_REF:0000024 MGI:5461303, RGD:13792537 NCBI chr10:62,035,866...62,109,075
Ensembl chr10:62,035,866...62,109,078
JBrowse link
G Selp selectin P enables IEA
ISO
GO_REF:0000107
(PMID:7680663)
Ensembl
RGD
PMID:7680663 GO_REF:0000107 NCBI chr13:82,428,914...82,464,629
Ensembl chr13:82,429,063...82,464,628
JBrowse link
G Serpina10 serpin family A member 10 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:127,500,014...127,508,470
Ensembl chr 6:127,500,016...127,508,452
Ensembl chr 6:127,500,016...127,508,452
JBrowse link
G Serpinc1 serpin family C member 1 IDA RGD PMID:7362830 RGD:1599342 NCBI chr13:78,806,107...78,820,375
Ensembl chr13:78,805,347...78,833,192
JBrowse link
G Serpind1 serpin family D member 1 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:87,913,814...87,924,880
Ensembl chr11:87,913,806...87,924,816
JBrowse link
G Serpine2 serpin family E member 2 enables IDA
IEA
ISO
GO_REF:0000107
(PMID:1939253), (PMID:3997857)
Ensembl
RGD
PMID:1939253 PMID:3997857, PMID:19167525 GO_REF:0000107, RGD:2317918 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 enables ISO
IEA
(PMID:10660608), (PMID:11741940), (PMID:9192640)
GO_REF:0000107
RGD
Ensembl
PMID:9192640 PMID:10660608 PMID:11741940 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Slit1 slit guidance ligand 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366
JBrowse link
G Slit2 slit guidance ligand 2 enables ISO
IEA
IBA
(PMID:17062560)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:17062560, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
G Slit3 slit guidance ligand 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:19,924,200...20,517,918
Ensembl chr10:20,320,878...20,518,518
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:104,718,403...104,879,611
Ensembl chr 6:104,718,512...104,877,980
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 enables IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743, PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Sost sclerostin enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:89,897,087...89,900,131
Ensembl chr10:89,897,087...89,900,131
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 enables IDA PMID:8106553 BHF-UCL PMID:8106553 RGD:1579949 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Thbs1 thrombospondin 1 enables ISO (PMID:101549), (PMID:8288588) RGD PMID:101549 PMID:8288588 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs2 thrombospondin 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Thbs3 thrombospondin 3 enables ISO (PMID:8288588) RGD PMID:8288588 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Thbs4 thrombospondin 4 enables ISO
IEA
(PMID:7852353)
GO_REF:0000107
RGD
Ensembl
PMID:7852353 GO_REF:0000107 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Tmem184a transmembrane protein 184A enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr12:16,906,863...16,924,143
Ensembl chr12:16,912,249...16,921,426
JBrowse link
G Tnxb tenascin XB enables ISO (MGI:70320|PMID:7512972) RGD PMID:7512972 MGI:70320
G Tpsb2 tryptase beta 2 enables ISO (MGI:2153290|PMID:11533057) RGD PMID:11533057 MGI:2153290 NCBI chr10:14,722,672...14,724,464
Ensembl chr10:14,722,756...14,724,600
JBrowse link
G Vegfa vascular endothelial growth factor A enables IEA
ISO
GO_REF:0000002
(MGI:3758404|PMID:17626017), (MGI:77585|PMID:8614412)
(PMID:14570917), (PMID:15001987)
InterPro
RGD
PMID:8614412 PMID:14570917 PMID:15001987 PMID:17626017 GO_REF:0000002 MGI:3758404 MGI:77585 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vegfb vascular endothelial growth factor B enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:222,237,000...222,242,786
Ensembl chr 1:222,239,022...222,242,644
JBrowse link
G Vtn vitronectin IDA RGD PMID:8804356 RGD:10040982 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Zfp207 zinc finger protein 207 enables ISO (MGI:1335807|PMID:9832628) RGD PMID:9832628 MGI:1335807 NCBI chr10:67,762,970...67,784,854
Ensembl chr10:67,762,995...67,774,787
JBrowse link
hyaluronic acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan enables IEA GO_REF:0000002
GO_REF:0000043
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Bcan brevican enables IEA GO_REF:0000043
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G C1qbp complement C1q binding protein enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:8567680)
UniProt
RGD
PMID:8567680, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
JBrowse link
G Cd44 CD44 molecule (Indian blood group) enables IBA
ISO
IEA
PMID:21873635
(MGI:893774|PMID:1469058)
(MGI:2449954|PMID:10926769)
GO_REF:0000107
GO_REF:0000002
(PMID:17170110), (PMID:17324121)
RGD
Ensembl
InterPro
PMID:1469058 PMID:10926769 PMID:17170110 PMID:17324121, PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:2449954 MGI:893774, RGD:13792537 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cemip cell migration inducing hyaluronidase 1 enables ISS
ISO
GO_REF:0000024
(MGI:5545862|PMID:24251095)
(PMID:23509262)
UniProt
RGD
PMID:23509262 PMID:24251095 GO_REF:0000024 MGI:5545862 NCBI chr 1:146,069,774...146,226,320
Ensembl chr 1:146,069,771...146,226,462
JBrowse link
G Chodl chondrolectin NOT|enables ISO (PMID:12079284) RGD PMID:12079284 NCBI chr11:17,537,980...17,560,305
Ensembl chr11:17,538,063...17,560,296
JBrowse link
G Hapln1 hyaluronan and proteoglycan link protein 1 TAS RGD PMID:3459153 RGD:69818 NCBI chr 2:18,354,542...18,419,077
Ensembl chr 2:18,354,542...18,419,071
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 enables IEA GO_REF:0000043
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:187,395,104...187,402,076
Ensembl chr 2:187,396,349...187,401,786
JBrowse link
G Hapln3 hyaluronan and proteoglycan link protein 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:140,827,279...140,845,386
Ensembl chr 1:140,827,295...140,835,151
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:21,081,377...21,089,508
Ensembl chr16:21,081,377...21,089,508
JBrowse link
G Hmmr hyaluronan-mediated motility receptor enables TAS
IEA
GO_REF:0000002 InterPro PMID:11596057 GO_REF:0000002, RGD:727324 NCBI chr10:25,861,490...25,890,639
Ensembl chr10:25,861,490...25,890,639
JBrowse link
G Hyal2 hyaluronidase 2 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12676986), (PMID:19443707)
UniProt
Ensembl
RGD
PMID:12676986 PMID:19443707 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 enables ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:87,733,374...87,879,958
Ensembl chr 8:87,733,545...87,879,888
JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 enables IBA
ISO
IEA
PMID:21873635
(MGI:3044445|PMID:15044457)
GO_REF:0000107
RGD
Ensembl
PMID:15044457, PMID:21873635 GO_REF:0000107 MGI:3044445, RGD:13792537 NCBI chr11:46,615,091...46,693,565
Ensembl chr11:46,615,200...46,693,565
JBrowse link
G Itih4 inter-alpha-trypsin inhibitor heavy chain 4 NOT|enables ISO (MGI:2156147|PMID:11803570) RGD PMID:11803570 MGI:2156147 NCBI chr16:6,970,367...6,985,538
Ensembl chr16:6,970,342...6,985,579
JBrowse link
G Layn layilin enables ISO
IBA
(PMID:11294894)
PMID:21873635
RGD PMID:11294894, PMID:21873635 RGD:13792537 NCBI chr 8:55,447,203...55,469,420
Ensembl chr 8:55,447,709...55,467,688
JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 enables IBA
ISO
PMID:21873635
(MGI:2135409|PMID:11278811)
RGD PMID:11278811, PMID:21873635 MGI:2135409, RGD:13792537 NCBI chr 1:175,663,266...175,676,699
Ensembl chr 1:175,663,266...175,676,699
JBrowse link
G Ncan neurocan enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:21,050,243...21,076,707
Ensembl chr16:21,050,243...21,076,707
JBrowse link
G RGD1562885 similar to RIKEN cDNA 2300002M23 enables ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:3,689,608...3,691,164 JBrowse link
G Stab1 stabilin 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:7,220,434...7,250,934
Ensembl chr16:7,222,067...7,250,924
JBrowse link
G Stab2 stabilin 2 enables IDA
IEA
PMID:12181351
GO_REF:0000002
InterPro PMID:12181351 GO_REF:0000002, RGD:625583 NCBI chr 7:27,369,853...27,552,078
Ensembl chr 7:27,369,853...27,552,078
JBrowse link
G Susd5 sushi domain containing 5 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:122,331,489...122,370,684
Ensembl chr 8:122,331,583...122,368,368
JBrowse link
G Tnfaip6 TNF alpha induced protein 6 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:37,545,238...37,564,704
Ensembl chr 3:37,545,238...37,564,699
JBrowse link
G Vcan versican enables IEA GO_REF:0000043
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842
JBrowse link
peptidoglycan binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC115202.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:109,473,143...109,475,567 JBrowse link
G Hk1 hexokinase 1 enables ISO
IEA
(PMID:27374331)
GO_REF:0000107
(MGI:5790524|PMID:27374331)
RGD
Ensembl
PMID:27374331 GO_REF:0000107 MGI:5790524 NCBI chr20:31,911,460...31,979,780
Ensembl chr20:31,912,262...31,956,649
JBrowse link
G Ighe immunoglobulin heavy constant epsilon enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:138,066,728...138,068,606 JBrowse link
G Ighm immunoglobulin heavy constant mu enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 6:138,054,662...138,662,511 JBrowse link
G Jchain joining chain of multimeric IgA and IgM contributes_to ISO (PMID:21786026) RGD PMID:21786026 NCBI chr14:21,176,841...21,183,731
Ensembl chr14:21,177,237...21,183,542
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 enables ISO (PMID:15998797) RGD PMID:15998797 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 enables IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(PMID:11461926), (PMID:16354652), (PMID:17502600)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11461926 PMID:16354652 PMID:17502600, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 1:79,790,879...79,796,064
Ensembl chr 1:79,790,705...79,796,111
JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 enables IBA
ISO
PMID:21873635
(PMID:11461926)
RGD PMID:11461926, PMID:21873635 RGD:13792537 NCBI chr 7:14,426,481...14,435,987
Ensembl chr 7:14,429,701...14,435,967
JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 enables ISO (PMID:11461926), (PMID:16354652), (PMID:17502600) RGD PMID:11461926 PMID:16354652 PMID:17502600 NCBI chr 2:191,903,626...192,264,872
Ensembl chr 2:192,253,629...192,264,840
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 enables ISO (PMID:11461926), (PMID:16354652), (PMID:17502600) RGD PMID:11461926 PMID:16354652 PMID:17502600 NCBI chr 2:190,125,655...190,204,230
Ensembl chr 2:190,125,693...190,148,265
JBrowse link
G Reg1a regenerating family member 1 alpha enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,497,962...109,500,626
Ensembl chr 4:109,497,962...109,501,082
JBrowse link
G Reg3a regenerating islet-derived 3 alpha enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,477,893...109,480,659
Ensembl chr 4:109,477,920...109,480,659
JBrowse link
G Reg3b regenerating family member 3 beta enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,467,272...109,470,510
Ensembl chr 4:109,467,272...109,470,510
JBrowse link
G Reg3g regenerating family member 3 gamma enables ISO
IBA
(PMID:16931762)
(MGI:5897756|PMID:16931762)
PMID:21873635
RGD PMID:16931762, PMID:21873635 MGI:5897756, RGD:13792537 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
G Tlr2 toll-like receptor 2 enables ISO (PMID:11986301) RGD PMID:11986301 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 enables ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Zg16 zymogen granule protein 16 enables ISO (MGI:5824939|PMID:27849619) RGD PMID:27849619 MGI:5824939 NCBI chr 1:198,483,800...198,486,157
Ensembl chr 1:198,483,805...198,486,157
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20076
    binding 17053
      carbohydrate derivative binding 2207
        glycosaminoglycan binding 226
          chondroitin sulfate binding 9
          chondroitin sulfate proteoglycan binding 3
          heparan sulfate binding 6
          heparin binding 164
          hyaluronic acid binding 24
          peptidoglycan binding 17
paths to the root