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ONTOLOGY REPORT - ANNOTATIONS


Term:lamin binding
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Accession:GO:0005521 term browser browse the term
Definition:Interacting selectively and non-covalently with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope.
Synonyms:broad_synonym: lamin/chromatin binding


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lamin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap8l A-kinase anchoring protein 8 like enables ISO (PMID:11034899) RGD PMID:11034899 NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
JBrowse link
G Bnip3l BCL2 interacting protein 3 like enables ISO UniProtKB:P02545-2 (PMID:10381623) RGD PMID:10381623 NCBI chr15:43,643,897...43,667,123
Ensembl chr15:43,643,897...43,667,029
JBrowse link
G Dmd dystrophin IPI RGD PMID:21886794 RGD:10044244 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IPI RGD PMID:16518874 RGD:10054427 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 enables ISO (PMID:22427340) RGD PMID:22427340 NCBI chr 6:127,327,959...127,334,430
Ensembl chr 6:127,327,959...127,334,428
JBrowse link
G Mlip muscular LMNA-interacting protein enables ISO
IBA
UniProtKB:P48678 (MGI:5700584|PMID:26436652)
PMID:21873635
RGD PMID:26436652, PMID:21873635, PMID:21873635 MGI:5700584, RGD:13792537, RGD:13792537 NCBI chr 8:84,409,957...84,634,637
Ensembl chr 8:84,434,784...84,632,817
JBrowse link
G Narf nuclear prelamin A recognition factor enables ISO
IBA
UniProtKB:P02545 (PMID:10514485)
PMID:21873635
RGD PMID:10514485, PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:110,445,765...110,463,735
Ensembl chr10:110,445,797...110,463,727
JBrowse link
G Pkp1 plakophilin 1 enables ISO (PMID:10852826) RGD PMID:10852826 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997
JBrowse link
G Plcb1 phospholipase C beta 1 enables ISO
IEA
UniProtKB:P14733 (MGI:4943663|PMID:19028838)
GO_REF:0000107
RGD
Ensembl
PMID:19028838 GO_REF:0000107 MGI:4943663 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma IPI RGD PMID:17683050 RGD:2293745 NCBI chr12:39,864,302...39,882,030
Ensembl chr12:39,864,295...39,882,030
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit IDA lamin-B RGD PMID:16830232 RGD:8693738 NCBI chr 1:198,219,012...198,225,775
Ensembl chr 1:198,219,054...198,225,580
JBrowse link
G Prnp prion protein IPI RGD PMID:21277044 RGD:10044248 NCBI chr 3:124,515,917...124,531,320
Ensembl chr 3:124,515,978...124,531,316
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 enables ISO (MGI:4441241|PMID:19933576) RGD PMID:19933576 MGI:4441241 NCBI chr12:17,488,482...17,533,334
Ensembl chr12:17,488,487...17,522,534
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 enables ISO (PMID:19933576) RGD PMID:19933576 NCBI chr 7:120,950,391...120,967,583
Ensembl chr 7:120,951,560...120,967,490
JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 enables ISO UniProtKB:P02545 (PMID:11801724) RGD PMID:11801724 NCBI chr 1:41,608,287...41,763,591
NCBI chr 1:41,844,840...42,086,662
Ensembl chr 1:41,608,418...42,077,535
JBrowse link
G Tmem201 transmembrane protein 201 enables ISO
IBA
(MGI:5492001|PMID:22349700)
PMID:21873635
RGD PMID:22349700, PMID:21873635, PMID:21873635 MGI:5492001, RGD:13792537, RGD:13792537 NCBI chr 5:166,672,700...166,695,288
Ensembl chr 5:166,672,450...166,695,134
JBrowse link
G Tmpo thymopoietin TAS RGD PMID:7737115 RGD:634476 NCBI chr 7:31,847,412...31,872,416
Ensembl chr 7:31,847,410...31,872,423
JBrowse link
G Tor1aip1 torsin 1A interacting protein 1 IDA RGD PMID:7721789 RGD:633106 NCBI chr13:73,670,649...73,704,668
Ensembl chr13:73,670,141...73,704,678
JBrowse link

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  molecular_function 20509
    binding 17315
      protein binding 14448
        lamin binding 18
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