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ONTOLOGY REPORT - ANNOTATIONS


Term:copper ion binding
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Accession:GO:0005507 term browser browse the term
Definition:Interacting selectively and non-covalently with copper (Cu) ions.
Synonyms:exact_synonym: copper binding
 broad_synonym: copper/cadmium binding


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copper ion binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adnp activity-dependent neuroprotector homeobox JBrowse link 3 164,937,188 164,964,819 RGD:2312790
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:1624291
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:1624291
G Aoc1 amine oxidase, copper containing 1 JBrowse link 4 78,496,043 78,515,582 RGD:1600115
RGD:13792537
RGD:1624291
G Aoc3 amine oxidase, copper containing 3 JBrowse link 10 89,251,370 89,259,313 RGD:1624291
RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:1600115
G Atox1 antioxidant 1 copper chaperone JBrowse link 10 40,790,850 40,805,886 RGD:1624291
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:1581812
RGD:1624291
RGD:1600115
G Ccs copper chaperone for superoxide dismutase JBrowse link 1 220,075,251 220,096,319 RGD:1624291
RGD:13792537
RGD:1600115
G Coa6 cytochrome c oxidase assembly factor 6 JBrowse link 19 59,327,328 59,333,706 RGD:1624291
G Commd1 copper metabolism domain containing 1 JBrowse link 14 107,664,321 107,759,974 RGD:1624291
RGD:1600115
G Cox11 cytochrome c oxidase copper chaperone COX11 JBrowse link 10 78,168,691 78,173,845 RGD:1600115
G Cox17 cytochrome c oxidase copper chaperone COX17 JBrowse link 11 64,962,663 64,968,437 RGD:1624291
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:727562
RGD:1624291
RGD:1600115
RGD:727703
G Cuta cutA divalent cation tolerance homolog JBrowse link 20 5,532,024 5,533,640 RGD:13792537
G Cutc cutC copper transporter JBrowse link 1 263,511,537 263,526,308 RGD:1624291
RGD:13792537
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:1625403
RGD:13792537
RGD:1624291
RGD:1600115
G Doxl1 diamine oxidase-like protein 1 JBrowse link 4 78,563,625 78,567,241 RGD:13792537
G Doxl2 diamine oxidase-like protein 2 JBrowse link 4 78,618,743 78,622,525 RGD:13792537
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:1600115
G F8 coagulation factor VIII JBrowse link 18 367,862 399,242 RGD:1600115
G Gpc1 glypican 1 JBrowse link 9 99,998,275 100,026,818 RGD:1600115
RGD:1624291
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
G Heph hephaestin JBrowse link X 65,377,313 65,658,479 RGD:1624291
RGD:1600115
G Hephl1 hephaestin-like 1 JBrowse link 8 13,614,800 13,680,870 RGD:1600115
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:1600115
RGD:1624291
G Lacc1 laccase domain containing 1 JBrowse link 15 59,199,537 59,217,200 RGD:13792537
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:1600669
G Loxl1 lysyl oxidase-like 1 JBrowse link 8 63,067,757 63,092,124 RGD:1600115
G Loxl2 lysyl oxidase-like 2 JBrowse link 15 51,276,022 51,365,238 RGD:1600115
RGD:1624291
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:1600115
G Loxl4 lysyl oxidase-like 4 JBrowse link 1 261,833,365 261,853,599 RGD:1600115
G Moxd1 monooxygenase, DBH-like 1 JBrowse link 1 22,124,498 22,206,565 RGD:13792537
G Moxd2 monooxygenase, DBH-like 2 JBrowse link 4 69,117,477 69,125,972 RGD:13792537
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:1600115
G Mt1 metallothionein 1 JBrowse link 19 11,301,991 11,303,007 RGD:1624291
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:625483
RGD:1600115
RGD:1624291
G Olr1643 olfactory receptor 1643 JBrowse link 15 28,894,627 28,895,553 RGD:1600115
RGD:1624291
G Olr462 olfactory receptor 462 JBrowse link 3 73,225,695 73,226,627 RGD:1600115
RGD:1624291
G P2rx2 purinergic receptor P2X 2 JBrowse link 12 52,397,666 52,401,005 RGD:1642665
G P2rx4 purinergic receptor P2X 4 JBrowse link 12 39,308,022 39,325,673 RGD:1642695
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1642698
G Pam peptidylglycine alpha-amidating monooxygenase JBrowse link 9 111,028,543 111,177,588 RGD:2302417
RGD:14390065
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Prnd prion like protein doppel JBrowse link 3 124,543,227 124,548,548 RGD:1624291
RGD:13792537
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:729621
RGD:1600115
RGD:1624291
G RGD1564854 similar to divalent cation tolerant protein CUTA JBrowse link 3 13,936,709 13,955,651 RGD:13792537
G Rnpep arginyl aminopeptidase JBrowse link 13 52,092,863 52,124,006 RGD:2325932
G S100a13 S100 calcium binding protein A13 JBrowse link 2 189,906,022 189,912,516 RGD:1624291
RGD:1600115
G S100a5 S100 calcium binding protein A5 JBrowse link 2 189,999,669 190,005,877 RGD:1624291
RGD:1600115
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:729857
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1600115
RGD:1624291
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:1358244
RGD:13792537
RGD:1600115
RGD:1624291
RGD:634854
G Sod3 superoxide dismutase 3 JBrowse link 14 60,958,583 60,971,143 RGD:13792537
G Svs1 seminal vesicle secretory protein 1 JBrowse link 4 78,639,672 78,644,570 RGD:13792537
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:1624291
RGD:1600115
copper chaperone activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atox1 antioxidant 1 copper chaperone JBrowse link 10 40,790,850 40,805,886 RGD:1624291
RGD:13792537
G Cox17 cytochrome c oxidase copper chaperone COX17 JBrowse link 11 64,962,663 64,968,437 RGD:1624291
RGD:13792537
cupric ion binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:1624291
RGD:1600115
G Sumf1 sulfatase modifying factor 1 JBrowse link 4 140,139,017 140,220,482 RGD:1600115
RGD:1624291
cuprous ion binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
RGD:1600115
G Cox17 cytochrome c oxidase copper chaperone COX17 JBrowse link 11 64,962,663 64,968,437 RGD:1624291
RGD:1600115
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1600115
RGD:1624291
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:1624291
RGD:1600115
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
RGD:1600115
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:1624291
RGD:1600115
superoxide dismutase copper chaperone activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:1624291
G Ccs copper chaperone for superoxide dismutase JBrowse link 1 220,075,251 220,096,319 RGD:634854
RGD:13792537
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  molecular_function 18465
    binding 15221
      ion binding 5291
        cation binding 3261
          metal ion binding 3158
            transition metal ion binding 1037
              copper ion binding 60
                copper chaperone activity + 5
                copper ion sensor activity 0
                cupric ion binding 3
                cuprous ion binding 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.