ONTOLOGY REPORT - ANNOTATIONS


Term:calcium channel activity
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Accession:GO:0005262 term browser browse the term
Definition:Enables the facilitated diffusion of a calcium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
Synonyms:xref: reactome:R-HSA-139854 "IP3R tetramer:I(1,4,5)P3:4xCa2+ transports Ca2+ from platelet dense tubular system to cytosol";   reactome:R-HSA-139855 "P2X1-mediated entry of Ca++ from plasma";   reactome:R-HSA-210420 "Ca2+ influx through voltage gated Ca2+ channels";   reactome:R-HSA-3295579 "TRPs transport extracellular Ca2+ to cytosol";   reactome:R-HSA-5263618 "CACFD1 dimer transports Ca2+ from extracellular region to cytosol";   reactome:R-HSA-8949145 "VDAC1,2,3 translocate calcium from the cytosol to the mitochondrial intermembrane space";   reactome:R-HSA-8949178 "MCU translocates calcium from the mitochondrial intermembrane space to the mitochondrial matrix"


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calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:13792537
G Anxa6 annexin A6 JBrowse link 10 40,320,581 40,375,605 RGD:13792537
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1624291
G Cacng6 calcium voltage-gated channel auxiliary subunit gamma 6 JBrowse link 1 64,307,684 64,322,124 RGD:1600115
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 JBrowse link 1 64,330,106 64,350,338 RGD:1600115
G Catsper2 cation channel, sperm associated 2 JBrowse link 3 113,357,361 113,379,498 RGD:1600115
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit JBrowse link 1 167,206,722 167,212,199 RGD:1600115
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit JBrowse link 14 43,883,450 43,890,171 RGD:1600115
G Gpm6a glycoprotein m6a JBrowse link 16 39,367,697 39,719,292 RGD:708586
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:1624291
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A JBrowse link 5 64,928,620 65,073,012 RGD:1624291
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B JBrowse link 7 12,764,993 12,771,310 RGD:1600115
RGD:1624291
G Mcu mitochondrial calcium uniporter JBrowse link 20 29,037,452 29,199,224 RGD:1624291
RGD:13792537
G Panx1 Pannexin 1 JBrowse link 8 13,567,185 13,606,040 RGD:1624291
RGD:1600115
G Pkd1 polycystin 1, transient receptor potential channel interacting JBrowse link 10 13,914,057 13,962,008 RGD:1624291
RGD:1600115
G Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting JBrowse link 14 89,047,949 89,193,579 RGD:1624291
RGD:13792537
G Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting JBrowse link 19 41,990,249 42,054,390 RGD:13792537
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link 14 6,602,004 6,645,257 RGD:1624291
RGD:13792537
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel JBrowse link 1 263,922,201 263,959,318 RGD:1624291
RGD:13792537
G Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel JBrowse link 18 27,190,661 27,225,488 RGD:13792537
G Pkdrej polycystin family receptor for egg jelly JBrowse link 7 126,695,498 126,701,872 RGD:13792537
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:1600115
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:1624291
RGD:1600115
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:1624291
RGD:1600115
G Sec61a1 Sec61 translocon alpha 1 subunit JBrowse link 4 120,453,577 120,467,932 RGD:1600115
RGD:1624291
G Slc24a1 solute carrier family 24 member 1 JBrowse link 8 70,409,683 70,438,352 RGD:13792537
G Slc24a2 solute carrier family 24 member 2 JBrowse link 5 105,336,287 105,579,959 RGD:1624291
RGD:13792537
G Slc24a3 solute carrier family 24 member 3 JBrowse link 3 139,333,942 139,835,728 RGD:13792537
G Slc24a4 solute carrier family 24 member 4 JBrowse link 6 126,015,799 126,158,727 RGD:13792537
G Slc24a5 solute carrier family 24 member 5 JBrowse link 3 117,335,212 117,354,480 RGD:13792537
G Tmco1 transmembrane and coiled-coil domains 1 JBrowse link 13 85,465,015 85,559,113 RGD:1624291
RGD:1600115
G Tmem37 transmembrane protein 37 JBrowse link 13 36,094,665 36,101,443 RGD:1600115
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 JBrowse link 5 3,783,247 3,836,485 RGD:1624291
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 JBrowse link 8 103,503,982 103,554,905 RGD:1600115
G Trpc2 transient receptor potential cation channel, subfamily C, member 2, pseudogene JBrowse link 1 167,180,103 167,192,456 RGD:1600115
G Trpc3 transient receptor potential cation channel, subfamily C, member 3 JBrowse link 2 123,329,954 123,467,574 RGD:1600115
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 JBrowse link 2 143,433,102 143,605,757 RGD:625475
RGD:1600115
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 JBrowse link X 115,624,670 115,908,248 RGD:1624291
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 JBrowse link 8 6,811,543 6,917,534 RGD:7242941
G Trpc7 transient receptor potential cation channel, subfamily C, member 7 JBrowse link 17 8,134,267 8,280,360 RGD:1624291
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 JBrowse link 1 124,983,391 125,101,759 RGD:1600115
RGD:1624291
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 JBrowse link 1 101,293,300 101,323,484 RGD:1624291
RGD:1600115
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:1299260
RGD:1600115
RGD:1624291
G Trpm8 transient receptor potential cation channel, subfamily M, member 8 JBrowse link 9 95,393,370 95,484,528 RGD:1624291
RGD:1600115
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 JBrowse link 10 59,799,123 59,824,208 RGD:1624291
RGD:13792537
G Trpv2 transient receptor potential cation channel, subfamily V, member 2 JBrowse link 10 48,903,540 48,925,036 RGD:1624291
RGD:13792537
RGD:1600115
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 JBrowse link 10 59,829,755 59,863,780 RGD:13792537
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:8553293
RGD:1624291
RGD:13792537
RGD:10400856
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 JBrowse link 4 70,947,615 70,974,004 RGD:7205490
RGD:13792537
RGD:1600115
RGD:1624291
RGD:632623
G Trpv6 transient receptor potential cation channel, subfamily V, member 6 JBrowse link 4 70,918,631 70,934,291 RGD:632623
RGD:13792537
RGD:1624291
RGD:1600115
RGD:11344952
RGD:68825
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:1600115
calcium-induced calcium release activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link 14 6,602,004 6,645,257 RGD:1624291
RGD:1600115
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:1600115
RGD:13792537
RGD:1624291
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:7175259
RGD:13792537
RGD:1600115
RGD:1624291
G Ryr3 ryanodine receptor 3 JBrowse link 3 104,117,307 104,665,151 RGD:7175259
RGD:13792537
calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:1624291
RGD:1600115
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:1624291
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:1624291
RGD:1600115
G Jph1 junctophilin 1 JBrowse link 5 1,417,414 1,511,754 RGD:13792537
G Jph2 junctophilin 2 JBrowse link 3 159,709,998 159,776,536 RGD:1624291
RGD:13792537
G Jph3 junctophilin 3 JBrowse link 19 54,553,419 54,613,477 RGD:1624291
RGD:13792537
G Jph4 junctophilin 4 JBrowse link 15 33,767,116 33,777,289 RGD:13792537
G Rasa3 RAS p21 protein activator 3 JBrowse link 16 81,320,090 81,434,239 RGD:1624291
RGD:1600115
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:1624291
RGD:1600115
G Ryr3 ryanodine receptor 3 JBrowse link 3 104,117,307 104,665,151 RGD:1624291
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 JBrowse link 5 3,783,247 3,836,485 RGD:1600115
RGD:1624291
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:1624291
RGD:1600115
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 JBrowse link 10 59,799,123 59,824,208 RGD:8553505
glutamate-gated calcium ion channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:1600115
RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1600115
RGD:1624291
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:1600115
RGD:1624291
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C JBrowse link 10 103,798,290 103,816,923 RGD:1600115
RGD:1624291
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D JBrowse link 1 101,819,068 101,859,146 RGD:1600115
RGD:1624291
high voltage-gated calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:7205477
RGD:1624291
RGD:1600115
RGD:7205480
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:7205441
RGD:1600115
RGD:1624291
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:7205477
RGD:13792537
RGD:1600115
RGD:1624291
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1624291
RGD:13792537
RGD:1600115
RGD:7207845
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:632484
RGD:13792537
RGD:1624291
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:634679
RGD:13792537
RGD:1624291
RGD:1600115
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 JBrowse link 10 85,954,138 85,974,764 RGD:1624291
RGD:13792537
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1624291
RGD:13792537
RGD:1600115
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 JBrowse link 7 140,311,120 140,324,902 RGD:11059598
RGD:13792537
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:1624291
RGD:13792537
inositol 1,4,5-trisphosphate receptor activity involved in regulation of postsynaptic cytosolic calcium levels term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:1600115
RGD:1624291
inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:6480876
RGD:13792537
RGD:1624291
RGD:1600115
RGD:7175271
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:7175271
RGD:13792537
RGD:1624291
RGD:12790654
RGD:7175277
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:619539
RGD:13792537
RGD:1624291
RGD:1600115
RGD:7175271
RGD:7175268
RGD:7175265
RGD:2290285
ligand-gated calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcoln1 mucolipin 1 JBrowse link 12 2,054,629 2,068,682 RGD:1624291
G P2rx4 purinergic receptor P2X 4 JBrowse link 12 39,308,022 39,325,673 RGD:1624291
RGD:13673751
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:1624291
RGD:1600115
low voltage-gated calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1e calcium voltage-gated channel subunit alpha1 E JBrowse link 13 71,899,445 72,534,992 RGD:69790
G Cacna1g calcium voltage-gated channel subunit alpha1 G JBrowse link 10 82,129,071 82,197,828 RGD:2308879
RGD:13792537
RGD:1624291
RGD:1600115
RGD:7207257
RGD:7175320
G Cacna1h calcium voltage-gated channel subunit alpha1 H JBrowse link 10 14,730,932 14,789,201 RGD:68748
RGD:1600115
RGD:13792537
RGD:7207257
RGD:1624291
G Cacna1i calcium voltage-gated channel subunit alpha1 I JBrowse link 7 121,521,787 121,619,300 RGD:7175320
RGD:13792537
RGD:7207257
NAADP-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mcoln1 mucolipin 1 JBrowse link 12 2,054,629 2,068,682 RGD:7205504
RGD:13792537
G Mcoln2 mucolipin 2 JBrowse link 2 252,018,594 252,068,209 RGD:13792537
G Mcoln3 mucolipin 3 JBrowse link 2 251,930,532 252,007,722 RGD:13792537
G Tpcn1 two pore segment channel 1 JBrowse link 12 41,507,784 41,566,847 RGD:1600115
RGD:13792537
RGD:1624291
G Tpcn2 two pore segment channel 2 JBrowse link 1 218,419,182 218,448,902 RGD:1624291
RGD:1600115
ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:7175256
RGD:13792537
RGD:1624291
RGD:1600115
RGD:12903237
RGD:7242196
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:1624291
RGD:13792537
RGD:1600115
RGD:7175259
RGD:7175254
G Ryr3 ryanodine receptor 3 JBrowse link 3 104,117,307 104,665,151 RGD:7175259
RGD:13792537
store-operated calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102549471 short transient receptor potential channel 2-like JBrowse link 1 167,158,720 167,180,052 RGD:13792537
G Orai1 ORAI calcium release-activated calcium modulator 1 JBrowse link 12 38,981,903 38,995,570 RGD:7175077
RGD:13792537
RGD:1600115
RGD:1624291
G Orai2 ORAI calcium release-activated calcium modulator 2 JBrowse link 12 23,544,483 23,564,602 RGD:13792537
G Orai3 ORAI calcium release-activated calcium modulator 3 JBrowse link 1 199,217,504 199,222,363 RGD:13792537
G Stim1 stromal interaction molecule 1 JBrowse link 1 167,373,894 167,533,412 RGD:7175077
G Stim2 stromal interaction molecule 2 JBrowse link 14 59,198,180 59,323,947 RGD:1624291
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 JBrowse link 8 103,503,982 103,554,905 RGD:1624291
RGD:13792537
G Trpc2 transient receptor potential cation channel, subfamily C, member 2, pseudogene JBrowse link 1 167,180,103 167,192,456 RGD:13792537
G Trpc3 transient receptor potential cation channel, subfamily C, member 3 JBrowse link 2 123,329,954 123,467,574 RGD:13792537
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 JBrowse link 2 143,433,102 143,605,757 RGD:1624291
RGD:13792537
RGD:1600115
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 JBrowse link X 115,624,670 115,908,248 RGD:13792537
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 JBrowse link 8 6,811,543 6,917,534 RGD:1624291
RGD:13792537
G Trpc7 transient receptor potential cation channel, subfamily C, member 7 JBrowse link 17 8,134,267 8,280,360 RGD:13792537
stretch-activated, cation-selective, calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fam155b family with sequence similarity 155, member B JBrowse link X 69,579,968 69,605,032 RGD:13792537
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:1624291
RGD:1600115
voltage-gated calcium channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cachd1 cache domain containing 1 JBrowse link 5 119,596,726 119,832,326 RGD:13792537
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:634678
RGD:13792537
RGD:1624291
RGD:1600115
RGD:8553366
RGD:1582495
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:1299351
RGD:13792537
RGD:1624291
RGD:1600115
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:625474
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1582591
RGD:1580158
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:727563
RGD:13792537
RGD:1624291
RGD:6767284
RGD:1600115
G Cacna1e calcium voltage-gated channel subunit alpha1 E JBrowse link 13 71,899,445 72,534,992 RGD:7205480
RGD:13792537
RGD:1624291
RGD:1600115
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:1624291
RGD:13792537
G Cacna1g calcium voltage-gated channel subunit alpha1 G JBrowse link 10 82,129,071 82,197,828 RGD:1624291
RGD:1600115
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:1624291
RGD:13792537
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 JBrowse link 4 15,706,974 16,130,848 RGD:625474
RGD:13792537
RGD:1624291
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 JBrowse link 8 116,154,661 116,285,643 RGD:632381
RGD:13792537
RGD:1600115
RGD:1624291
G Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 JBrowse link 16 4,871,348 5,795,825 RGD:632381
RGD:13792537
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 JBrowse link 4 151,298,548 151,409,263 RGD:1624291
RGD:13792537
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 JBrowse link 10 85,954,138 85,974,764 RGD:1582495
RGD:1624291
RGD:1600115
RGD:1582591
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:632405
RGD:1600115
RGD:1624291
RGD:1582495
G Cacnb2_v1 calcium voltage-gated channel auxiliary subunit beta 2, variant 1 RGD:1582495
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 JBrowse link 7 140,311,120 140,324,902 RGD:1358466
RGD:1624291
RGD:634680
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:737839
RGD:1624291
G Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 JBrowse link 10 95,921,479 95,934,170 RGD:70681
RGD:1624291
RGD:1600115
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 JBrowse link 7 119,228,112 119,353,332 RGD:70681
RGD:13792537
RGD:1624291
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 JBrowse link 1 192,613,766 192,708,371 RGD:13792537
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 JBrowse link 10 95,954,160 96,015,484 RGD:13792537
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 JBrowse link 10 96,122,240 96,166,606 RGD:13792537
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 JBrowse link 1 64,374,547 64,405,380 RGD:13792537
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 JBrowse link 1 64,330,106 64,350,338 RGD:13792537
G Calhm1 calcium homeostasis modulator 1 JBrowse link 1 266,916,312 266,919,031 RGD:1624291
RGD:1600115
G Catsper1 cation channel, sperm associated 1 JBrowse link 1 220,715,000 220,724,235 RGD:1624291
RGD:13792537
G Catsper3 cation channel, sperm associated 3 JBrowse link 17 8,900,034 8,925,385 RGD:1624291
RGD:1600115
G Catsper4 cation channel, sperm associated 4 JBrowse link 5 152,430,052 152,446,808 RGD:1624291
RGD:1600115
G Gas6 growth arrest specific 6 JBrowse link 16 81,213,364 81,243,824 RGD:1624291
RGD:1600115
G Grm7 glutamate metabotropic receptor 7 JBrowse link 4 142,452,616 143,368,460 RGD:1624291
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 JBrowse link X 55,439,388 57,004,865 RGD:8553610
G Itgav integrin subunit alpha V JBrowse link 3 71,113,269 71,205,958 RGD:1624291
RGD:1600115
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:8553610
G Oprm1 opioid receptor, mu 1 JBrowse link 1 43,454,803 43,704,948 RGD:8656003
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link 14 6,602,004 6,645,257 RGD:1624291
RGD:13792537
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:1600115
RGD:1624291
G Tmc1 transmembrane channel-like 1 JBrowse link 1 238,336,919 238,525,792 RGD:1624291
RGD:13792537
G Tmc2 transmembrane channel-like 2 JBrowse link 3 122,720,769 122,790,100 RGD:1624291
RGD:13792537
G Tpcn1 two pore segment channel 1 JBrowse link 12 41,507,784 41,566,847 RGD:1600115
G Tpcn2 two pore segment channel 2 JBrowse link 1 218,419,182 218,448,902 RGD:1624291
RGD:1600115
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 JBrowse link 5 3,783,247 3,836,485 RGD:1303969
voltage-gated calcium channel activity involved in AV node cell action potential term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:1624291
RGD:1600115
G Cacna1g calcium voltage-gated channel subunit alpha1 G JBrowse link 10 82,129,071 82,197,828 RGD:1624291
RGD:1600115
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1624291
RGD:1600115
voltage-gated calcium channel activity involved in bundle of His cell action potential term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 JBrowse link 4 15,706,974 16,130,848 RGD:1600115
RGD:1624291
voltage-gated calcium channel activity involved in cardiac muscle cell action potential term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:1624291
RGD:1600115
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:6767284
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1624291
RGD:1600115
voltage-gated calcium channel activity involved in positive regulation of presynaptic cytosolic calcium levels term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:13792530
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1624291
RGD:1600115
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1624291
RGD:1600115
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link 3 37,950,846 38,211,478 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:13792535
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:1624291
RGD:1600115
G Erc1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 4 152,087,393 152,380,023 RGD:1624291
voltage-gated calcium channel activity involved in regulation of cytosolic calcium levels term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:13792537
voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
G Cacna1e calcium voltage-gated channel subunit alpha1 E JBrowse link 13 71,899,445 72,534,992 RGD:13792544
G Htr1b 5-hydroxytryptamine receptor 1B JBrowse link 8 89,113,984 89,130,830 RGD:13702319
G Marcksl1 MARCKS-like 1 JBrowse link 5 147,714,163 147,716,486 RGD:13792524
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:13702284
G Tspoap1 TSPO associated protein 1 JBrowse link 10 75,053,956 75,079,615 RGD:1624291
RGD:1600115
voltage-gated calcium channel activity involved SA node cell action potential term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1624291
RGD:1600115
G Cacna1g calcium voltage-gated channel subunit alpha1 G JBrowse link 10 82,129,071 82,197,828 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18241
    transporter activity 1133
      transmembrane transporter activity 1049
        inorganic molecular entity transmembrane transporter activity 809
          inorganic cation transmembrane transporter activity 587
            cation channel activity 322
              calcium channel activity 121
                ligand-gated calcium channel activity + 26
                store-operated calcium channel activity 13
                stretch-activated, cation-selective, calcium channel activity + 2
                voltage-gated calcium channel activity + 51
Path 2
Term Annotations click to browse term
  molecular_function 18241
    transporter activity 1133
      transmembrane transporter activity 1049
        ion transmembrane transporter activity 866
          cation transmembrane transporter activity 634
            inorganic cation transmembrane transporter activity 587
              metal ion transmembrane transporter activity 439
                calcium ion transmembrane transporter activity 137
                  calcium channel activity 121
                    ligand-gated calcium channel activity + 26
                    store-operated calcium channel activity 13
                    stretch-activated, cation-selective, calcium channel activity + 2
                    voltage-gated calcium channel activity + 51
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.