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ONTOLOGY REPORT - ANNOTATIONS


Term:structural constituent of cytoskeleton
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Accession:GO:0005200 term browser browse the term
Definition:The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.


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structural constituent of cytoskeleton term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTG1 actin gamma 1 IEA Ensembl GO_REF:0000107 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,160,350...1,323,217
JBrowse link
G ACTR2 actin related protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:76,691,275...76,729,269
Ensembl chr 3:76,691,275...76,729,210
JBrowse link
G ACTR3 actin related protein 3 IEA Ensembl GO_REF:0000107 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,846...20,208,186
JBrowse link
G ADD1 adducin 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:1,627,146...1,710,653
Ensembl chr 8:1,627,177...1,710,661
JBrowse link
G ADD2 adducin 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:71,729,882...71,845,761
Ensembl chr 3:71,730,002...71,840,862
JBrowse link
G ADD3 adducin 3 IEA Ensembl GO_REF:0000107 NCBI chr14:120,451,421...120,583,725
Ensembl chr14:120,451,573...120,583,723
JBrowse link
G ANK2 ankyrin 2 ISO RGD PMID:16687515 RGD:1599119 NCBI chr 8:109,306,793...109,661,970 JBrowse link
G ANK3 ankyrin 3 ISO (PMID:17620337) BHF-UCL PMID:17620337 NCBI chr14:63,416,154...63,809,220 JBrowse link
G ARPC1B actin related protein 2/3 complex subunit 1B IEA Ensembl GO_REF:0000107 NCBI chr 3:6,329,737...6,342,641
Ensembl chr 3:6,220,939...6,342,637
JBrowse link
G ARPC2 actin related protein 2/3 complex subunit 2 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:120,297,122...120,328,795
Ensembl chr15:120,297,127...120,329,059
JBrowse link
G ARPC3 actin related protein 2/3 complex subunit 3 IEA Ensembl GO_REF:0000107 NCBI chr14:31,814,382...31,823,452
Ensembl chr14:31,814,150...31,826,855
JBrowse link
G ARPC4 actin related protein 2/3 complex subunit 4 IEA Ensembl GO_REF:0000107 NCBI chr13:66,075,926...66,093,986
Ensembl chr13:66,055,364...66,100,310
JBrowse link
G ARPC5 actin related protein 2/3 complex subunit 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:124,839,062...124,847,906
Ensembl chr 9:124,837,773...124,848,108
JBrowse link
G CROCC ciliary rootlet coiled-coil, rootletin IEA Ensembl GO_REF:0000107 NCBI chr 6:75,558,558...75,606,305
Ensembl chr 6:75,559,077...75,606,299
JBrowse link
G CYLC1 cylicin 1 IEA InterPro GO_REF:0000002 NCBI chr  X:66,975,125...67,090,165
Ensembl chr  X:67,026,711...67,090,330
JBrowse link
G GFAP glial fibrillary acidic protein IEA Ensembl GO_REF:0000107 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,468,898
JBrowse link
G LOC100127131 tubulin alpha-1C chain IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:15,153,516...15,269,783 JBrowse link
G LOC100155138 tubulin alpha-3 chain IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr14:50,646,616...50,657,344
Ensembl chr14:50,636,325...50,657,870
JBrowse link
G LOC100158003 tubulin alpha-1D chain IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:121,305,563...121,311,919 JBrowse link
G LOC100510930 tubulin alpha-3 chain IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr14:50,594,115...50,600,789 JBrowse link
G LOC100624785 tubulin beta-2A chain IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:1,910,585...1,914,668
Ensembl chr 7:1,910,585...1,956,119
JBrowse link
G LORICRIN loricrin cornified envelope precursor protein ISO (MGI:65974|PMID:2190691) MGI PMID:2190691 MGI:65974 NCBI chr 4:96,303,835...96,308,016 JBrowse link
G NEFH neurofilament heavy ISO PMID:11034913
(PMID:7536898)
BHF-UCL PMID:7536898, PMID:11034913 RGD:8554743 NCBI chr14:46,559,698...46,568,686
Ensembl chr14:46,559,860...46,569,910
JBrowse link
G NEFL neurofilament light ISS UniProt GO_REF:0000024 NCBI chr14:8,991,321...8,996,900
Ensembl chr14:8,990,750...8,997,300
JBrowse link
G PEX26 peroxisomal biogenesis factor 26 IEA InterPro GO_REF:0000002 NCBI chr 5:70,133,024...70,142,515
Ensembl chr 5:70,133,022...70,180,433
JBrowse link
G PLEC plectin IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:696,355...753,859
Ensembl chr 4:685,456...753,859
JBrowse link
G SPTB spectrin beta, erythrocytic IEA UniProt GO_REF:0000104 NCBI chr 7:88,812,717...88,954,471
Ensembl chr 7:88,812,715...88,954,306
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 IEA UniProt GO_REF:0000104 NCBI chr 3:86,585,225...86,784,316
Ensembl chr 3:86,585,050...86,784,107
JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 IEA UniProt GO_REF:0000104 NCBI chr 2:5,683,414...5,739,418
Ensembl chr 2:5,695,858...5,739,417
JBrowse link
G SPTBN4 spectrin beta, non-erythrocytic 4 IEA InterPro GO_REF:0000002 NCBI chr 6:48,729,839...48,812,799
Ensembl chr 6:48,729,750...48,812,796
JBrowse link
G SYNM synemin ISO (PMID:11737198), (PMID:16777071) UniProtKB PMID:11737198, PMID:16777071 NCBI chr 1:137,855,644...137,883,914 JBrowse link
G TLN1 talin 1 IEA InterPro GO_REF:0000002 NCBI chr 1:236,416,041...236,450,978
Ensembl chr 1:236,416,044...236,450,922
JBrowse link
G TLN2 talin 2 IEA InterPro GO_REF:0000002 NCBI chr 1:109,208,663...109,680,663
Ensembl chr 1:109,208,672...109,680,199
JBrowse link
G TNNT2 troponin T2, cardiac type ISO (MGI:2675179|PMID:12832403) MGI PMID:12832403 MGI:2675179 NCBI chr10:23,749,528...23,759,696
Ensembl chr10:23,749,335...23,763,396
JBrowse link
G TUBA1A tubulin alpha 1a IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:15,186,059...15,190,211
Ensembl chr 5:15,149,099...15,269,267
JBrowse link
G TUBA1B tubulin alpha 1b IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:15,150,229...15,153,620
Ensembl chr 5:15,149,099...15,269,267
JBrowse link
G TUBA4A tubulin alpha 4a IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:121,290,149...121,294,048
Ensembl chr15:121,283,404...121,294,654
JBrowse link
G TUBA8 tubulin alpha 8 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:70,154,251...70,174,001
Ensembl chr 5:70,133,022...70,180,433
JBrowse link
G TUBAL3 tubulin alpha like 3 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr10:65,476,215...65,487,334
Ensembl chr10:65,476,227...65,489,345
JBrowse link
G TUBB tubulin beta class I IEA
IBA
(PMID:21873635) Ensembl
GO_Central
InterPro
PMID:21873635 GO_REF:0000002, GO_REF:0000107 NCBI chr 7:23,247,827...23,252,240
Ensembl chr 7:23,245,743...23,294,218
JBrowse link
G TUBB1 tubulin beta 1 class VI IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:59,161,420...59,168,385
Ensembl chr17:59,161,420...59,168,385
JBrowse link
G TUBB2B tubulin, beta 2B class IIb IEA InterPro GO_REF:0000002 NCBI chr 7:1,952,705...1,955,780
Ensembl chr 7:1,910,585...1,956,119
JBrowse link
G TUBB4A tubulin beta 4A class IVa IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:72,599,244...72,605,362
Ensembl chr 2:72,599,706...72,619,450
JBrowse link
G TUBB4B tubulin beta 4B class IVb IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002
G TUBB6 tubulin beta 6 class V IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:97,233,639...97,240,692
Ensembl chr 6:97,229,868...97,240,665
JBrowse link
G TUBD1 tubulin delta 1 IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr12:36,079,939...36,111,306
Ensembl chr12:36,079,939...36,111,252
JBrowse link
G TUBE1 tubulin epsilon 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:78,018,113...78,048,466
Ensembl chr 1:78,018,429...78,048,452
JBrowse link
G TUBG1 tubulin gamma 1 IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr12:20,171,705...20,220,929 JBrowse link
G VIM vimentin IEA Ensembl GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,172
JBrowse link
structural constituent of postsynaptic actin cytoskeleton term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356
JBrowse link
G ACTBL2 actin beta like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:36,469,062...36,471,776
Ensembl chr16:36,470,503...36,471,739
JBrowse link
G ACTG1 actin gamma 1 ISO PMID:9875357 SynGO PMID:9875357 RGD:13702432 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,160,350...1,323,217
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta ISO PMID:17404223 SynGO PMID:17404223 RGD:13432239 NCBI chr18:50,862,225...50,956,263
Ensembl chr18:50,861,466...50,957,945
JBrowse link
G INA internexin neuronal intermediate filament protein alpha IEA Ensembl GO_REF:0000107 NCBI chr14:114,227,998...114,240,566
Ensembl chr14:114,227,993...114,240,560
JBrowse link
structural constituent of postsynaptic intermediate filament cytoskeleton term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INA internexin neuronal intermediate filament protein alpha IEA Ensembl GO_REF:0000107 NCBI chr14:114,227,998...114,240,566
Ensembl chr14:114,227,993...114,240,560
JBrowse link
G NEFH neurofilament heavy IEA Ensembl GO_REF:0000107 NCBI chr14:46,559,698...46,568,686
Ensembl chr14:46,559,860...46,569,910
JBrowse link
G NEFL neurofilament light IEA Ensembl GO_REF:0000107 NCBI chr14:8,991,321...8,996,900
Ensembl chr14:8,990,750...8,997,300
JBrowse link
structural constituent of presynaptic actin cytoskeleton term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLS3 plastin 3 ISO (MGI:5469774|PMID:23263861) SynGO PMID:23263861 MGI:5469774 NCBI chr  X:94,885,098...94,971,664
Ensembl chr  X:94,885,118...94,971,664
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.