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ONTOLOGY REPORT - ANNOTATIONS


Term:integrin binding
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Accession:GO:0005178 term browser browse the term
Definition:Interacting selectively and non-covalently with an integrin.
Synonyms:narrow_synonym: integrin ligand


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integrin binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 IEA
ISO
GO_REF:0000107
UniProtKB:P09055 (PMID:11223950), (PMID:7983147)
UniProtKB:P09055 (MGI:MGI:5640954|PMID:11223950)
Ensembl
RGD
PMID:7983147, PMID:11223950 GO_REF:0000107, MGI:MGI:5640954 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Adam15 ADAM metallopeptidase domain 15 ISO
IBA
(PMID:22505472)
PMID:21873635
RGD PMID:22505472, PMID:21873635 RGD:13792537 NCBI chr 2:188,661,831...188,672,337
Ensembl chr 2:188,661,699...188,672,247
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO
IEA
UniProtKB:P05556|UniProtKB:P08648 (PMID:14970227)
GO_REF:0000107
RGD
Ensembl
PMID:14970227 GO_REF:0000107 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO
IBA
UniProtKB:P05556 (PMID:15361064), (PMID:17704059)
PMID:21873635
RGD PMID:15361064, PMID:17704059, PMID:21873635 RGD:13792537 NCBI chr16:71,810,377...71,887,926
Ensembl chr16:71,810,377...71,887,926
JBrowse link
G Angptl3 angiopoietin-like 3 ISO UniProtKB:P06756 (PMID:11877390) RGD PMID:11877390 NCBI chr 5:117,698,590...117,706,729
Ensembl chr 5:117,698,764...117,705,808
JBrowse link
G Anp32a acidic nuclear phosphoprotein 32 family member A IPI RGD PMID:17016859 RGD:10401134 NCBI chr 8:67,295,578...67,333,075
Ensembl chr 8:67,295,727...67,333,247
JBrowse link
G Anxa7 annexin A7 ISO UniProtKB:P16144 (PMID:24007983) RGD PMID:24007983 NCBI chr15:4,254,470...4,281,296
Ensembl chr15:4,254,499...4,281,287
JBrowse link
G App amyloid beta precursor protein ISO (PMID:21126803) RGD PMID:21126803 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Calr calreticulin ISO UniProtKB:P26006 (PMID:1911778) RGD PMID:1911778 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Casr calcium-sensing receptor IPI RGD PMID:21969374, PMID:21969374, PMID:21969374, PMID:21969374, PMID:21969374 RGD:7205691, RGD:7205691, RGD:7205691, RGD:7205691, RGD:7205691 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Ccn1 cellular communication network factor 1 ISO
IBA
IEA
(MGI:MGI:2673745|PMID:12826661)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12826661, PMID:21873635 GO_REF:0000107, MGI:MGI:2673745, RGD:13792537 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn2 cellular communication network factor 2 ISO
IBA
(MGI:MGI:1342849|PMID:10446209)
PMID:21873635
RGD PMID:10446209, PMID:21873635 MGI:MGI:1342849, RGD:13792537 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Ccn3 cellular communication network factor 3 ISO
IBA
UniProtKB:P05106|UniProtKB:P05556|UniProtKB:P06756|UniProtKB:P08648|UniProtKB:P18084 (PMID:12695522), (PMID:15611078)
PMID:21873635
RGD PMID:12695522, PMID:15611078, PMID:21873635 RGD:13792537 NCBI chr 7:94,375,134...94,382,154
Ensembl chr 7:94,375,020...94,383,024
JBrowse link
G Ccn4 cellular communication network factor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Ccn5 cellular communication network factor 5 IDA
IBA
PMID:24488697
PMID:21873635
UniProt
GO_Central
PMID:24488697, PMID:21873635 RGD:14390054, RGD:13792537 NCBI chr 3:160,207,969...160,219,316
Ensembl chr 3:160,207,913...160,219,331
JBrowse link
G Ccn6 cellular communication network factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,237,491...44,255,064
Ensembl chr20:44,237,491...44,255,064
JBrowse link
G Cd151 CD151 molecule (Raph blood group) IPI
ISO
UniProtKB:P26006 (PMID:17716972), (PMID:24220332), (PMID:27993971) RGD PMID:17716972, PMID:24220332, PMID:27993971, PMID:20124479 RGD:9698434 NCBI chr 1:214,446,659...214,450,668
Ensembl chr 1:214,009,784...214,013,765
Ensembl chr 1:214,009,784...214,013,765
JBrowse link
G Cd177 CD177 molecule ISO UniProtKB:P05107|UniProtKB:P11215 (PMID:21193407), (PMID:28807980) RGD PMID:21193407, PMID:28807980 NCBI chr 1:82,964,683...82,987,306
Ensembl chr 1:82,964,683...82,987,253
JBrowse link
G Cd226 CD226 molecule ISO UniProtKB:P05107 (PMID:16831868) RGD PMID:16831868 NCBI chr18:86,299,392...86,394,772
Ensembl chr18:86,299,463...86,394,765
JBrowse link
G Cd40lg CD40 ligand ISO
IEA
(PMID:31331973)
GO_REF:0000107
RGD
Ensembl
PMID:31331973 GO_REF:0000107 NCBI chr  X:159,703,703...159,714,886
Ensembl chr  X:159,703,578...159,716,562
JBrowse link
G Cd81 Cd81 molecule ISS
ISO
IEA
GO_REF:0000024
(PMID:12796480), (PMID:27993971)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12796480, PMID:27993971 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311
JBrowse link
G Cd9 CD9 molecule IPI
ISO
(PMID:12796480), (PMID:27993971)
UniProtKB:P09055|UniProtKB:Q61739 (MGI:MGI:1351541|PMID:10634791)
RGD PMID:10634791, PMID:12796480, PMID:27993971, PMID:17684062, PMID:20124479 MGI:MGI:1351541, RGD:2302243, RGD:9698434 NCBI chr 4:157,977,163...158,010,091
Ensembl chr 4:157,977,162...158,010,166
JBrowse link
G Cdh17 cadherin 17 ISO UniProtKB:P05556|UniProtKB:P17301 (PMID:25336636) RGD PMID:25336636 NCBI chr 5:25,354,187...25,443,675
Ensembl chr 5:25,391,115...25,443,718
JBrowse link
G Cdh26 cadherin 26 ISO (PMID:28051089) RGD PMID:28051089 NCBI chr 3:173,969,004...174,020,867
Ensembl chr 3:173,969,273...174,019,766
JBrowse link
G Cib2 calcium and integrin binding family member 2 ISO PR:Q61738 (MGI:MGI:3820189|PMID:18611855) RGD PMID:18611855 MGI:MGI:3820189 NCBI chr 8:59,123,078...59,139,946
Ensembl chr 8:59,123,079...59,139,946
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain ISO (PMID:16754661) RGD PMID:16754661 NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO (PMID:9573018) RGD PMID:9573018 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO (PMID:12682293) RGD PMID:12682293 NCBI chr 9:88,357,528...88,484,735
Ensembl chr 9:88,357,556...88,485,830
JBrowse link
G Comp cartilage oligomeric matrix protein ISO
IEA
PR:O54890 (MGI:MGI:6100855|PMID:27151399)
GO_REF:0000107
RGD
Ensembl
PMID:27151399 GO_REF:0000107, MGI:MGI:6100855 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23125415)
Ensembl
UniProt
RGD
PMID:23125415 GO_REF:0000024, GO_REF:0000107 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule ISO UniProtKB:P13612 (PMID:12869515) RGD PMID:12869515 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO (PMID:29301984) RGD PMID:29301984 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Dab2 DAB adaptor protein 2 ISO (MGI:MGI:5442513|PMID:15734730) RGD PMID:15734730 MGI:MGI:5442513 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Dmd dystrophin IPI RGD PMID:18677563 RGD:2325671 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Dst dystonin ISO UniProtKB:P16144 (PMID:11375975) RGD PMID:11375975 NCBI chr 9:37,902,336...38,296,961
Ensembl chr 9:37,902,303...38,196,273
JBrowse link
G Edil3 EGF like repeats and discoidin domains 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:17,616,116...18,128,514
Ensembl chr 2:17,616,401...18,128,512
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:29,430,789...29,488,737
Ensembl chr  X:29,430,831...29,488,739
JBrowse link
G Egfr epidermal growth factor receptor IPI RGD PMID:21349584 RGD:5131469 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Emp2 epithelial membrane protein 2 ISO UniProtKB:P05106 (PMID:16216233)
UniProtKB:P09055 (MGI:MGI:5605959|PMID:12189152)
RGD PMID:12189152, PMID:16216233 MGI:MGI:5605959 NCBI chr10:5,433,248...5,467,840
Ensembl chr10:5,433,248...5,467,839
JBrowse link
G Esm1 endothelial cell-specific molecule 1 ISO
IBA
UniProtKB:P20701 (PMID:11544294)
PMID:21873635
RGD PMID:11544294, PMID:21873635 RGD:13792537 NCBI chr 2:45,104,392...45,113,130
Ensembl chr 2:45,104,305...45,113,131
JBrowse link
G F11r F11 receptor ISO UniProtKB:P05106|UniProtKB:P20701 (PMID:11812992), (PMID:15344881) RGD PMID:11812992, PMID:15344881 NCBI chr13:89,826,272...89,850,151
Ensembl chr13:89,826,254...89,850,612
JBrowse link
G Fap fibroblast activation protein, alpha ISO UniProtKB:P05556|UniProtKB:P26006 (PMID:10455171) RGD PMID:10455171 NCBI chr 3:48,467,781...48,536,242
Ensembl chr 3:48,467,781...48,536,235
JBrowse link
G Fbln1 fibulin 1 ISO (PMID:25661773) RGD PMID:25661773 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
G Fbln5 fibulin 5 ISO
ISS
(MGI:MGI:2681470|PMID:11805835)
GO_REF:0000024
RGD
UniProt
PMID:11805835 GO_REF:0000024, MGI:MGI:2681470 NCBI chr 6:125,644,797...125,723,957
Ensembl chr 6:125,644,804...125,723,944
JBrowse link
G Fbn1 fibrillin 1 ISO UniProtKB:P05106|UniProtKB:P05556|UniProtKB:P06756|UniProtKB:P08648|UniProtKB:P18564 (PMID:12807887), (PMID:15062093), (PMID:17158881) RGD PMID:12807887, PMID:15062093, PMID:17158881 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120
JBrowse link
G Fermt1 fermitin family member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Fermt3 fermitin family member 3 ISO
IBA
UniProtKB:P11835 (MGI:MGI:3783912|PMID:18278053), (MGI:MGI:3838441|PMID:19234461)
PMID:21873635
RGD PMID:18278053, PMID:19234461, PMID:21873635 MGI:MGI:3783912, MGI:MGI:3838441, RGD:13792537 NCBI chr 1:222,254,183...222,272,775
Ensembl chr 1:222,254,184...222,272,285
JBrowse link
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:18441324)
GO_REF:0000024
RGD
UniProt
PMID:18441324 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fgf2 fibroblast growth factor 2 ISS
ISO
GO_REF:0000024
(PMID:28302677)
UniProt
RGD
PMID:28302677 GO_REF:0000024 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fn1 fibronectin 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
UniProtKB:P05556 (PMID:11792823), (PMID:19738201), (PMID:24658351)
Ensembl
RGD
PMID:11792823, PMID:19738201, PMID:24658351, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Frmd5 FERM domain containing 5 ISO (PMID:25448675) RGD PMID:25448675 NCBI chr 3:113,480,780...113,755,286
Ensembl chr 3:113,483,269...113,525,864
JBrowse link
G Gfap glial fibrillary acidic protein IDA PMID:16988027 MGI PMID:16988027 RGD:8554200 NCBI chr10:90,990,762...90,999,435
Ensembl chr10:90,990,762...90,999,506
JBrowse link
G Gfra1 GDNF family receptor alpha 1 IPI RGD PMID:18465789 RGD:2325691 NCBI chr 1:279,203,046...279,572,789 JBrowse link
G Gpnmb glycoprotein nmb ISO
IBA
(MGI:MGI:1931898|PMID:11114299)
PMID:21873635
RGD PMID:11114299, PMID:21873635 MGI:MGI:1931898, RGD:13792537 NCBI chr 4:78,694,447...78,715,685
Ensembl chr 4:78,694,447...78,715,683
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IPI RGD PMID:18677563 RGD:2325671 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hmgb1 high mobility group box 1 ISO (PMID:20826760) RGD PMID:20826760 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Ibsp integrin-binding sialoprotein IEA
ISO
GO_REF:0000107
(PMID:24103036)
Ensembl
RGD
PMID:24103036 GO_REF:0000107 NCBI chr14:6,801,200...6,813,987
Ensembl chr14:6,801,204...6,813,945
JBrowse link
G Icam1 intercellular adhesion molecule 1 IMP
ISO
IBA
Itgb2/CD18 binding
UniProtKB:P11215|UniProtKB:P20701 (PMID:12208882), (PMID:1448173), (PMID:23620790)
PMID:21873635
RGD PMID:1448173, PMID:12208882, PMID:23620790, PMID:16825578, PMID:21873635 RGD:1582375, RGD:13792537 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Icam2 intercellular adhesion molecule 2 ISO
IBA
UniProtKB:P20701 (PMID:1448173)
PMID:21873635
RGD PMID:1448173, PMID:21873635 RGD:13792537 NCBI chr10:94,569,889...94,581,218
Ensembl chr10:94,569,890...94,576,512
JBrowse link
G Icam4 intercellular adhesion molecule 4, Landsteiner-Wiener blood group IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:22,047,697...22,048,793
Ensembl chr 8:22,047,697...22,048,793
JBrowse link
G Icam5 intercellular adhesion molecule 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:22,050,222...22,057,209
Ensembl chr 8:22,050,222...22,057,209
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:19578119), (PMID:22351760)
GO_REF:0000107
RGD
Ensembl
PMID:19578119, PMID:22351760 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igf2 insulin-like growth factor 2 ISS
ISO
IEA
GO_REF:0000024
(PMID:28873464)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28873464 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Il1b interleukin 1 beta ISS
ISO
IEA
GO_REF:0000024
(PMID:29030430)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29030430 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Ilk integrin-linked kinase IPI RGD PMID:11133699 RGD:2302097 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier ISO UniProtKB:P20701 (PMID:29100055) RGD PMID:29100055 NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248
JBrowse link
G Itga2 integrin subunit alpha 2 IMP RGD PMID:17118629 RGD:1625131 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Itga3 integrin subunit alpha 3 IPI RGD PMID:2223092 RGD:2325828 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Itga5 integrin subunit alpha 5 IPI
ISO
PR:O54890|PR:O70309|PR:P09055|PR:Q9Z0T9 (MGI:MGI:79483|PMID:8601592) RGD PMID:8601592, PMID:18167060 MGI:MGI:79483, RGD:2314623 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itga6 integrin subunit alpha 6 ISO PR:P09055 (MGI:MGI:75849|PMID:1833411) RGD PMID:1833411 MGI:MGI:75849 NCBI chr 3:58,442,904...58,515,124
Ensembl chr 3:58,443,101...58,515,124
JBrowse link
G Itga7 integrin subunit alpha 7 IPI RGD PMID:1315319 RGD:70774 NCBI chr 7:3,355,079...3,383,886
Ensembl chr 7:3,355,116...3,384,675
JBrowse link
G Itgav integrin subunit alpha V ISO UniProtKB:P05106 (PMID:20826760)
UniProtKB:O70309 (MGI:MGI:5285150|PMID:20826760)
RGD PMID:20826760 MGI:MGI:5285150 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb1 integrin subunit beta 1 IMP
IBA
ISO
IEA
IPI
PMID:21873635
PR:P11688|PR:Q61739-2 (MGI:MGI:75849|PMID:1833411), (MGI:MGI:79483|PMID:8601592)
GO_REF:0000107
RGD
Ensembl
PMID:1833411, PMID:8601592, PMID:17118629, PMID:21873635, PMID:2223092, PMID:18167060 GO_REF:0000107, MGI:MGI:75849, MGI:MGI:79483, RGD:1625131, RGD:13792537, RGD:2325828, RGD:2314623 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 ISO UniProtKB:P05556 (PMID:12473654), (PMID:15703214) RGD PMID:12473654, PMID:15703214 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Itgb1bp2 integrin subunit beta 1 binding protein 2 IPI RGD PMID:10506186 RGD:1582492 NCBI chr  X:71,342,770...71,347,623
Ensembl chr  X:71,342,775...71,347,619
JBrowse link
G Itgb2 integrin subunit beta 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Itgb3 integrin subunit beta 3 ISO
IEA
PR:P11688 (MGI:MGI:79483|PMID:8601592)
GO_REF:0000002
UniProtKB:P06756 (PMID:20826760)
RGD
InterPro
PMID:8601592, PMID:20826760 GO_REF:0000002, MGI:MGI:79483 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Itgb4 integrin subunit beta 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Itgb5 integrin subunit beta 5 ISO PR:P11688|UniProtKB:P43406 (MGI:MGI:5285150|PMID:20826760), (MGI:MGI:79483|PMID:8601592) RGD PMID:8601592, PMID:20826760 MGI:MGI:5285150, MGI:MGI:79483 NCBI chr11:70,056,500...70,172,164
Ensembl chr11:70,056,500...70,172,372
JBrowse link
G Itgb6 integrin subunit beta 6 ISO
IBA
PR:P11688 (MGI:MGI:79483|PMID:8601592)
PMID:21873635
RGD PMID:8601592, PMID:21873635 MGI:MGI:79483, RGD:13792537 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Itgb7 integrin subunit beta 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:143,820,236...143,837,802
Ensembl chr 7:143,820,900...143,837,780
JBrowse link
G Itgb8 integrin subunit beta 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:147,089,280...147,172,846
Ensembl chr 6:147,094,097...147,172,813
JBrowse link
G Itgbl1 integrin subunit beta like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:110,114,148...110,378,970
Ensembl chr15:110,114,148...110,378,969
JBrowse link
G Jam2 junctional adhesion molecule 2 ISO (PMID:12070135) RGD PMID:12070135 NCBI chr11:24,235,310...24,285,279
Ensembl chr11:24,266,345...24,285,275
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO PR:P05555|PR:P11835 (MGI:MGI:3618936|PMID:16093349)
UniProtKB:P05106|UniProtKB:P05107|UniProtKB:P11215 (PMID:12208882), (PMID:15194813), (PMID:19461049)
RGD PMID:12208882, PMID:15194813, PMID:16093349, PMID:19461049 MGI:MGI:3618936 NCBI chr 8:28,147,110...28,208,466
Ensembl chr 8:28,147,111...28,208,466
JBrowse link
G Jaml junction adhesion molecule like ISO UniProtKB:P05556 (PMID:12869515) RGD PMID:12869515 NCBI chr 8:49,378,644...49,408,894
Ensembl chr 8:49,378,644...49,410,088
JBrowse link
G Kdr kinase insert domain receptor ISO
IEA
UniProtKB:P05106|UniProtKB:P20702 (PMID:10022831), (PMID:30873824)
GO_REF:0000107
RGD
Ensembl
PMID:10022831, PMID:30873824 GO_REF:0000107 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G L1cam L1 cell adhesion molecule ISO (MGI:MGI:3757617|PMID:8557754) RGD PMID:8557754 MGI:MGI:3757617 NCBI chr  X:156,901,244...156,928,064
Ensembl chr  X:156,909,913...156,928,057
JBrowse link
G Lama5 laminin subunit alpha 5 ISO
IBA
(MGI:MGI:2154892|PMID:11741585)
PMID:21873635
(PMID:11821406)
RGD PMID:11741585, PMID:11821406, PMID:21873635 MGI:MGI:2154892, RGD:13792537 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb1 laminin subunit beta 1 ISO
IBA
(MGI:MGI:84972|PMID:9004048)
PMID:21873635
RGD PMID:9004048, PMID:21873635 MGI:MGI:84972, RGD:13792537 NCBI chr 6:50,528,796...50,596,593
Ensembl chr 6:50,528,823...50,596,079
JBrowse link
G Lamb2 laminin subunit beta 2 ISO
IBA
IEA
PR:P09055|PR:Q61738|PR:Q61739 (MGI:MGI:4829569|PMID:20566382)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:20566382, PMID:21873635 GO_REF:0000107, MGI:MGI:4829569, RGD:13792537 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 ISO UniProtKB:P05107|UniProtKB:P05556 (PMID:20183869) RGD PMID:20183869 NCBI chr15:57,170,566...57,277,811
Ensembl chr15:57,221,292...57,277,811
JBrowse link
G Lgals12 galectin 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:222,891,626...222,903,728
Ensembl chr 1:222,891,626...222,902,320
JBrowse link
G Lgals8 galectin 8 ISO
IBA
IEA
UniProtKB:P05556 (PMID:19268462)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19268462, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr17:66,487,451...66,515,316
Ensembl chr17:66,487,457...66,511,870
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IDA RGD: 1310613|RGD: 628868 RGD PMID:15504915 RGD:2303714 NCBI chr 5:16,526,058...16,642,648
Ensembl chr 5:16,526,058...16,642,648
JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing IEA
ISO
GO_REF:0000107
(MGI:MGI:2681272|PMID:12000961), (MGI:MGI:5285150|PMID:20826760)
Ensembl
RGD
PMID:12000961, PMID:20826760 GO_REF:0000107, MGI:MGI:2681272, MGI:MGI:5285150 NCBI chr 1:140,845,478...140,860,882
Ensembl chr 1:140,845,465...140,860,894
JBrowse link
G Mmp14 matrix metallopeptidase 14 IPI RGD PMID:19027888 RGD:2307395 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Myh9 myosin, heavy chain 9 ISO (PMID:10822899) RGD PMID:10822899 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G Myh9l1 myosin heavy chain 9-like 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:118,991,251...119,071,722
Ensembl chr 7:118,992,356...119,071,712
Ensembl chr 7:118,992,356...119,071,712
JBrowse link
G Nf2 neurofibromin 2 IPI RGD PMID:9858254 RGD:1599274 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nisch nischarin ISO (MGI:MGI:1928322|PMID:11121431) RGD PMID:11121431 MGI:MGI:1928322 NCBI chr16:7,254,372...7,290,670
Ensembl chr16:7,254,974...7,290,561
JBrowse link
G Npnt nephronectin ISO MGI:MGI:96599 (MGI:MGI:2153230|PMID:11546798), (MGI:MGI:5306572|PMID:19342381) RGD PMID:11546798, PMID:19342381 MGI:MGI:2153230, MGI:MGI:5306572 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Nrg1 neuregulin 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20682778)
Ensembl
UniProt
RGD
PMID:20682778 GO_REF:0000024, GO_REF:0000107 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta ISO UniProtKB:P05106 (PMID:21670307)
UniProtKB:O54890 (MGI:MGI:5014432|PMID:21670307)
RGD PMID:21670307 MGI:MGI:5014432 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G Plpp3 phospholipid phosphatase 3 ISO
IEA
ISS
(MGI:MGI:3589050|PMID:16099422)
GO_REF:0000107
GO_REF:0000024
(PMID:12660161)
RGD
Ensembl
UniProt
PMID:12660161, PMID:16099422 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3589050 NCBI chr 5:124,690,214...124,765,499
Ensembl chr 5:124,690,214...124,765,498
JBrowse link
G Ppia peptidylprolyl isomerase A ISS
ISO
GO_REF:0000024
(MGI:MGI:6450355|PMID:24429998)
UniProt
RGD
PMID:24429998 GO_REF:0000024, MGI:MGI:6450355 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr14:22,706,906...22,707,648
Ensembl chr14:22,706,901...22,707,668
JBrowse link
G Prkca protein kinase C, alpha ISO UniProtKB:O54890 (MGI:MGI:5284791|PMID:16014375) RGD PMID:16014375 MGI:MGI:5284791 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Ptk2 protein tyrosine kinase 2 IPI
ISO
IEA
UniProtKB:P05556 (PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945, PMID:16935300, PMID:18465789 GO_REF:0000107, RGD:2325674, RGD:2325691 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptn pleiotrophin ISO UniProtKB:P05106|UniProtKB:P08648 (PMID:19141530) RGD PMID:19141530 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 ISO UniProtKB:P56199 (PMID:15592458) RGD PMID:15592458 NCBI chr18:63,415,298...63,489,240
Ensembl chr18:63,415,306...63,488,027
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 ISS
ISO
IEA
GO_REF:0000024
(PMID:19141530)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19141530 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Pxn paxillin IPI RGD PMID:16935300 RGD:2325674 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 ISO UniProtKB:P16144 (PMID:24851274) RGD PMID:24851274 NCBI chr 8:21,984,914...21,995,806
Ensembl chr 8:21,984,914...21,995,806
JBrowse link
G S1pr3 sphingosine-1-phosphate receptor 3 ISO UniProtKB:P16144 (PMID:24851274) RGD PMID:24851274 NCBI chr17:13,799,383...13,812,877
Ensembl chr17:13,799,383...13,812,704
JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) ISO
IBA
UniProtKB:P09055|UniProtKB:Q3V3R4 (MGI:MGI:3710037|PMID:17377534)
PMID:21873635
RGD PMID:17377534, PMID:21873635 MGI:MGI:3710037, RGD:13792537 NCBI chr 8:62,723,788...62,746,530
Ensembl chr 8:62,723,788...62,745,868
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO (PMID:14709558) RGD PMID:14709558 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO ComplexPortal:CPX-1827 (PMID:25839998) RGD PMID:25839998 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO UniProtKB:P05106 (PMID:19141530) RGD PMID:19141530 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Syk spleen associated tyrosine kinase ISO
IEA
UniProtKB:P05107 (PMID:12885943)
GO_REF:0000107
RGD
Ensembl
PMID:12885943 GO_REF:0000107 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
G Tcam1 testicular cell adhesion molecule 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:94,466,351...94,478,591
Ensembl chr10:94,466,523...94,478,594
JBrowse link
G Tgfbi transforming growth factor, beta induced IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:8,400,123...8,429,338
Ensembl chr17:8,400,146...8,429,338
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:17413041), (PMID:18757424) RGD PMID:17413041, PMID:18757424 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs4 thrombospondin 4 IEA
ISO
GO_REF:0000107
(PMID:16099885)
Ensembl
RGD
PMID:16099885 GO_REF:0000107 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Thy1 Thy-1 cell surface antigen ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:MGI:3796911|PMID:18346467), (MGI:MGI:5882873|PMID:22479590)
UniProtKB:P11215 (PMID:15004192), (PMID:18346467)
UniProt
RGD
PMID:15004192, PMID:18346467, PMID:22479590, PMID:21873635, PMID:18346467 GO_REF:0000024, MGI:MGI:3796911, MGI:MGI:5882873, RGD:13792537, RGD:12793016 NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 IPI
ISO
(MGI:MGI:3578612|PMID:15901773) RGD PMID:15901773, PMID:15901773 MGI:MGI:3578612, RGD:1598578 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Tln1 talin 1 IPI
IBA
ISO
PMID:21873635
UniProtKB:P05556 (PMID:12473654)
(MGI:MGI:4439219|PMID:20150896)
RGD PMID:12473654, PMID:20150896, PMID:16935300, PMID:21873635 MGI:MGI:4439219, RGD:2325674, RGD:13792537 NCBI chr 5:59,033,635...59,063,592
Ensembl chr 5:59,033,636...59,063,592
JBrowse link
G Tln2 talin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:73,009,980...73,441,536
Ensembl chr 8:73,014,137...73,194,837
JBrowse link
G Tnn tenascin N ISO
IBA
(MGI:MGI:3028459|PMID:14709716)
PMID:21873635
RGD PMID:14709716, PMID:21873635 MGI:MGI:3028459, RGD:13792537 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tnr tenascin R IPI RGD PMID:18658130 RGD:2325684 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link
G Tspan4 tetraspanin 4 ISO UniProtKB:P05556|UniProtKB:P23229|UniProtKB:P26006 (PMID:9360996) RGD PMID:9360996 NCBI chr 1:214,454,090...214,473,789
Ensembl chr 1:214,454,090...214,473,741
JBrowse link
G Tspan8 tetraspanin 8 IPI RGD PMID:20124479 RGD:9698434 NCBI chr 7:58,814,805...58,847,564
Ensembl chr 7:58,814,805...58,847,563
JBrowse link
G Utrn utrophin ISO UniProtKB:P05556 (PMID:16803572) RGD PMID:16803572 NCBI chr 1:6,451,809...6,970,040
Ensembl chr 1:6,451,810...6,970,040
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IMP
IBA
ISO
PMID:21873635
(PMID:1377228), (PMID:15220135), (PMID:19738201), (PMID:23620790)
RGD PMID:1377228, PMID:15220135, PMID:19738201, PMID:23620790, PMID:1377031, PMID:21873635 RGD:727551, RGD:13792537 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Vtn vitronectin ISO UniProtKB:P05106 (PMID:22505472), (PMID:8837777) RGD PMID:8837777, PMID:22505472 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwf von Willebrand factor IEA
ISO
GO_REF:0000107
UniProtKB:P13612 (PMID:9079671)
Ensembl
RGD
PMID:9079671 GO_REF:0000107 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
integrin binding involved in cell-matrix adhesion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 ISO (PMID:18463100) RGD PMID:18463100 NCBI chr 6:26,821,249...26,829,013
Ensembl chr 6:26,821,255...26,828,972
JBrowse link
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 ISO
IBA
(PMID:23986478)
PMID:21873635
RGD PMID:23986478, PMID:21873635 RGD:13792537 NCBI chr 7:12,918,352...12,922,509
Ensembl chr 7:12,918,710...12,922,112
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20467
    binding 17270
      protein-containing complex binding 1542
        integrin binding 139
          integrin binding involved in cell-matrix adhesion 2
Path 2
Term Annotations click to browse term
  molecular_function 20467
    binding 17270
      protein binding 14480
        signaling receptor binding 1765
          integrin binding 139
            integrin binding involved in cell-matrix adhesion 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.