Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:ribonuclease activity
go back to main search page
Accession:GO:0004540 term browser browse the term
Definition:Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.


show annotations for term's descendants       view all columns           Sort by:
 
ribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:1624291
G Ang2 angiogenin, ribonuclease A family, member 2 JBrowse link 15 28,103,688 28,121,494 RGD:1624291
RGD:13792537
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 JBrowse link 9 93,767,837 94,161,106 RGD:1624291
G Ear1 eosinophil-associated, ribonuclease A family, member 1 JBrowse link 15 28,260,133 28,261,049 RGD:13792537
G Helz2 helicase with zinc finger 2 JBrowse link 3 176,730,024 176,744,382 RGD:1600115
G LOC100361866 eosinophil cationic protein-like JBrowse link 15 28,240,548 28,241,466 RGD:13792537
G LOC103690354 ribonuclease pancreatic beta-type JBrowse link 15 28,073,963 28,075,677 RGD:13792537
G LOC103694852 ribonuclease K6-like RGD:13792537
G LOC103694853 ribonuclease pancreatic gamma-type RGD:13792537
G Rnase1 ribonuclease A family member 1, pancreatic RGD:1624291
RGD:13792537
G Rnase10 ribonuclease A family member 10 JBrowse link 15 27,930,581 27,933,873 RGD:1556637
RGD:13792537
G Rnase11 ribonuclease A family member 11 JBrowse link 15 27,972,201 27,977,885 RGD:1556637
RGD:13792537
G Rnase12 ribonuclease A family member 12 JBrowse link 15 27,981,044 27,993,044 RGD:1556637
RGD:13792537
G Rnase13 ribonuclease A family member 13 JBrowse link 15 28,322,851 28,325,875 RGD:1556637
RGD:13792537
G Rnase17 ribonuclease 17 JBrowse link 15 28,204,043 28,204,929 RGD:13792537
G Rnase1l1 ribonuclease, RNase A family, 1-like 1 (pancreatic) JBrowse link 15 28,043,491 28,045,098 RGD:13792537
G Rnase1l2 ribonuclease, RNase A family, 1-like 2 (pancreatic) JBrowse link 15 28,127,147 28,128,797 RGD:13792537
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
RGD:13792537
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:13792537
G Rnase4 ribonuclease A family member 4 JBrowse link 15 28,018,040 28,035,395 RGD:13792537
RGD:1624291
G Rnase6 ribonuclease A family member k6 JBrowse link 15 28,080,307 28,084,269 RGD:1624291
RGD:13792537
G Rnase9 ribonuclease A family member 9 JBrowse link 15 27,964,000 27,968,492 RGD:1556637
RGD:13792537
G Rnasel ribonuclease L JBrowse link 13 71,188,712 71,202,636 RGD:2291995
G Rnaset2 ribonuclease T2 JBrowse link 1 53,174,879 53,192,048 RGD:1624291
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
3'-5'-exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Angel1 angel homolog 1 JBrowse link 6 110,644,327 110,681,397 RGD:13792537
G Angel2 angel homolog 2 JBrowse link 13 109,505,021 109,520,976 RGD:13792537
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:13792537
G Cnot6l CCR4-NOT transcription complex, subunit 6-like JBrowse link 14 15,059,101 15,148,255 RGD:13792537
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
G Cnot8 CCR4-NOT transcription complex, subunit 8 JBrowse link 10 43,538,150 43,551,271 RGD:1624291
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease JBrowse link 15 83,466,330 83,494,107 RGD:1624291
RGD:13792537
G Dis3l DIS3-like exosome 3'-5' exoribonuclease JBrowse link 8 69,771,211 69,807,880 RGD:1600115
RGD:13792537
RGD:1624291
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 JBrowse link 9 93,767,837 94,161,106 RGD:1624291
RGD:13792537
G Eri1 exoribonuclease 1 JBrowse link 16 60,307,148 60,327,237 RGD:13792537
G Eri2 ERI1 exoribonuclease family member 2 JBrowse link 1 189,540,145 189,549,891 RGD:13792537
G Eri3 ERI1 exoribonuclease family member 3 JBrowse link 5 136,406,009 136,533,408 RGD:13792537
G Exd2 exonuclease 3'-5' domain containing 2 JBrowse link 6 104,017,620 104,051,442 RGD:1624291
G Exosc10 exosome component 10 JBrowse link 5 165,374,964 165,398,195 RGD:1624291
RGD:13792537
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link 1 140,602,553 140,608,892 RGD:1624291
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 JBrowse link 2 187,302,192 187,311,677 RGD:1624291
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:13792537
G Pan2 poly(A) specific ribonuclease subunit PAN2 JBrowse link 7 2,717,021 2,736,541 RGD:1624291
RGD:1600115
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:13792537
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
RGD:13792537
RGD:1624291
G Pnldc1 PARN like, ribonuclease domain containing 1 JBrowse link 1 48,038,830 48,058,400 RGD:13792537
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 14 113,530,470 113,561,645 RGD:1624291
RGD:13792537
G Rexo2 RNA exonuclease 2 JBrowse link 8 52,802,604 52,814,321 RGD:1600115
RGD:13792537
G Toe1 target of EGR1, exonuclease JBrowse link 5 135,659,733 135,663,299 RGD:1624291
RGD:13792537
G Usb1 U6 snRNA biogenesis phosphodiesterase 1 JBrowse link 19 10,105,750 10,118,701 RGD:1624291
RGD:13792537
RGD:1600115
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:1624291
3'-tRNA processing endoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elac1 elaC ribonuclease Z 1 JBrowse link 18 69,706,522 69,723,869 RGD:13792537
5'-3' exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dcp2 decapping mRNA 2 JBrowse link 18 35,489,274 35,671,676 RGD:1624291
G Xrn1 5'-3' exoribonuclease 1 JBrowse link 8 103,774,125 103,883,563 RGD:1624291
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:1600115
endoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC118772.1 RGD:13792537
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:1624291
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1624291
G Ago3 argonaute RISC catalytic component 3 JBrowse link 5 144,355,792 144,436,509 RGD:1624291
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 15 27,849,943 27,852,083 RGD:2315668
G Cpsf3 cleavage and polyadenylation specific factor 3 JBrowse link 6 43,363,792 43,391,712 RGD:1624291
RGD:13792537
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
G Endog endonuclease G JBrowse link 3 8,741,833 8,744,414 RGD:13792537
G Endou endonuclease, poly(U)-specific JBrowse link 7 139,202,342 139,223,022 RGD:1624291
RGD:13792537
G Ern1 endoplasmic reticulum to nucleus signaling 1 JBrowse link 10 94,588,555 94,682,072 RGD:1624291
RGD:13792537
G Ern2 endoplasmic reticulum to nucleus signaling 2 JBrowse link 1 192,126,023 192,142,865 RGD:13792537
G Exog exo/endonuclease G JBrowse link 8 128,133,398 128,153,110 RGD:13792537
G Lactb2 lactamase, beta 2 JBrowse link 5 4,982,348 5,005,111 RGD:1624291
RGD:13792537
RGD:1600115
G Nob1 NIN1 (RPN12) binding protein 1 homolog JBrowse link 19 38,397,466 38,409,924 RGD:1624291
RGD:13792537
G Piwil1 piwi-like RNA-mediated gene silencing 1 JBrowse link 12 31,608,641 31,629,961 RGD:1624291
G Piwil2 piwi-like RNA-mediated gene silencing 2 JBrowse link 15 52,037,693 52,116,277 RGD:1624291
G Piwil4 piwi-like RNA-mediated gene silencing 4 JBrowse link 8 13,208,774 13,251,970 RGD:1624291
RGD:1600115
G Rcl1 RNA terminal phosphate cyclase-like 1 JBrowse link 1 247,228,012 247,272,369 RGD:13792537
G Rnasek ribonuclease K JBrowse link 10 56,848,367 56,850,085 RGD:1624291
RGD:13792537
G Rnaset2 ribonuclease T2 JBrowse link 1 53,174,879 53,192,048 RGD:13792537
G Slfn13 schlafen family member 13 JBrowse link 10 70,326,157 70,343,024 RGD:13601999
G Slfn14 schlafen family member 14 JBrowse link 10 70,493,340 70,504,810 RGD:1624291
G Smg6 SMG6 nonsense mediated mRNA decay factor JBrowse link 10
10
61,526,024
61,771,912
61,542,583
62,007,030
RGD:1624291
G Snd1 staphylococcal nuclease and tudor domain containing 1 JBrowse link 4 55,772,377 56,171,669 RGD:1624291
RGD:1600115
G Tsn translin JBrowse link 13 34,240,809 34,251,671 RGD:13792537
G Tsnax translin-associated factor X JBrowse link 19 57,771,539 57,785,567 RGD:13792537
G Ybey ybeY metalloendoribonuclease JBrowse link 20 12,917,111 12,926,587 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1600115
RGD:1624291
endoribonuclease activity, cleaving miRNA-paired mRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1600115
RGD:1624291
G Ago3 argonaute RISC catalytic component 3 JBrowse link 5 144,355,792 144,436,509 RGD:1624291
endoribonuclease activity, cleaving siRNA-paired mRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1600115
RGD:1624291
endoribonuclease activity, producing 3'-phosphomonoesters term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rida reactive intermediate imine deaminase A homolog JBrowse link 7 73,256,506 73,270,308 RGD:9685547
endoribonuclease activity, producing 5'-phosphomonoesters term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Endov endonuclease V JBrowse link 10 108,630,723 108,646,679 RGD:1624291
RGD:13792537
exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:1624291
RGD:1600115
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
G Exosc1 exosome component 1 JBrowse link 1 261,169,798 261,179,865 RGD:1624291
G Exosc10 exosome component 10 JBrowse link 5 165,374,964 165,398,195 RGD:1624291
G Exosc2 exosome component 2 JBrowse link 3 10,151,734 10,161,997 RGD:1624291
G Exosc3 exosome component 3 JBrowse link 5 60,866,498 60,871,734 RGD:1624291
G Exosc4 exosome component 4 JBrowse link 7 117,390,302 117,393,044 RGD:1624291
G Exosc5 exosome component 5 JBrowse link 1 82,452,104 82,461,607 RGD:1624291
G Exosc6 exosome component 6 JBrowse link 19 43,190,879 43,193,164 RGD:1624291
G Exosc7 exosome component 7 JBrowse link 8 132,204,628 132,229,968 RGD:1624291
G Exosc8 exosome component 8 JBrowse link 2 143,925,643 143,932,240 RGD:1624291
G Exosc9 exosome component 9 JBrowse link 2 123,264,679 123,275,623 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
RGD:1600115
phosphodiesterase decapping endonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Edc3 enhancer of mRNA decapping 3 JBrowse link 8 62,482,126 62,527,665 RGD:1624291
G LOC688828 similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16) JBrowse link 8 113,687,983 113,689,657 RGD:13792537
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291
RGD:13792537
G Nudt16l1 nudix hydrolase 16 like 1 JBrowse link 10 10,829,866 10,831,782 RGD:13792537
poly(A)-specific ribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot1 CCR4-NOT transcription complex, subunit 1 JBrowse link 19 9,668,186 9,761,605 RGD:1624291
G Cnot2 CCR4-NOT transcription complex, subunit 2 JBrowse link 7 59,526,105 59,617,307 RGD:1624291
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:1600115
RGD:13792537
RGD:1624291
G Cnot6l CCR4-NOT transcription complex, subunit 6-like JBrowse link 14 15,059,101 15,148,255 RGD:1624291
RGD:13792537
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
RGD:13792537
G Cnot8 CCR4-NOT transcription complex, subunit 8 JBrowse link 10 43,538,150 43,551,271 RGD:1624291
RGD:13792537
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:1600115
RGD:1624291
G Pan2 poly(A) specific ribonuclease subunit PAN2 JBrowse link 7 2,717,021 2,736,541 RGD:1600115
RGD:13792537
RGD:1624291
G Pan3 poly(A) specific ribonuclease subunit PAN3 JBrowse link 12 9,214,116 9,331,901 RGD:1624291
RGD:13792537
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:1624291
RGD:13792537
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
G Pnldc1 PARN like, ribonuclease domain containing 1 JBrowse link 1 48,038,830 48,058,400 RGD:1624291
RGD:13792537
G Toe1 target of EGR1, exonuclease JBrowse link 5 135,659,733 135,663,299 RGD:1624291
poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usb1 U6 snRNA biogenesis phosphodiesterase 1 JBrowse link 19 10,105,750 10,118,701 RGD:1600115
ribonuclease A activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690354 ribonuclease pancreatic beta-type JBrowse link 15 28,073,963 28,075,677 RGD:1600115
G LOC103694852 ribonuclease K6-like RGD:1624291
G LOC103694853 ribonuclease pancreatic gamma-type RGD:1600115
G Rnase1 ribonuclease A family member 1, pancreatic RGD:1600115
G Rnase1l1 ribonuclease, RNase A family, 1-like 1 (pancreatic) JBrowse link 15 28,043,491 28,045,098 RGD:1600115
G Rnase1l2 ribonuclease, RNase A family, 1-like 2 (pancreatic) JBrowse link 15 28,127,147 28,128,797 RGD:1600115
ribonuclease III activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link 11 86,852,682 86,885,233 RGD:1624291
RGD:13792537
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
RGD:13792537
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
RGD:13792537
G Mrpl44 mitochondrial ribosomal protein L44 JBrowse link 9 85,542,763 85,547,814 RGD:13792537
ribonuclease MRP activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pop1 POP1 homolog, ribonuclease P/MRP subunit JBrowse link 7 73,270,403 73,298,209 RGD:1624291
RGD:13792537
G Pop4 POP4 homolog, ribonuclease P/MRP subunit JBrowse link 1 94,661,127 94,669,461 RGD:13792537
ribonuclease P activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pop1 POP1 homolog, ribonuclease P/MRP subunit JBrowse link 7 73,270,403 73,298,209 RGD:1624291
RGD:13792537
G Pop4 POP4 homolog, ribonuclease P/MRP subunit JBrowse link 1 94,661,127 94,669,461 RGD:13792537
RGD:1600115
RGD:1624291
G Pop5 POP5 homolog, ribonuclease P/MRP subunit JBrowse link 12 47,138,346 47,143,152 RGD:1624291
RGD:13792537
G Pop7 POP7 homolog, ribonuclease P/MRP subunit JBrowse link 12 22,259,713 22,260,754 RGD:13792537
RGD:1624291
G Prorp protein only RNase P catalytic subunit JBrowse link 6 76,079,880 76,171,298 RGD:1600115
RGD:13792537
RGD:1624291
G Rpp14 ribonuclease P/MRP subunit p14 JBrowse link 15 18,625,963 18,636,157 RGD:1624291
G Rpp21 ribonuclease P/MRP subunit p21 JBrowse link 20 2,515,541 2,517,471 RGD:13792537
RGD:1624291
G Rpp25 ribonuclease P and MRP subunit p25 JBrowse link 8 62,283,336 62,284,716 RGD:1624291
RGD:1600115
G Rpp30 ribonuclease P/MRP subunit p30 JBrowse link 1 254,697,247 254,720,093 RGD:1624291
RGD:13792537
G Rpp38 ribonuclease P/MRP subunit p38 JBrowse link 17 78,915,450 78,919,144 RGD:1624291
G Rpp40 ribonuclease P/MRP subunit p40 JBrowse link 17 29,638,647 29,647,709 RGD:1624291
ribonuclease T2 activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnaset2 ribonuclease T2 JBrowse link 1 53,174,879 53,192,048 RGD:1600115
RNA lariat debranching enzyme activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbr1 debranching RNA lariats 1 JBrowse link 8 107,826,690 107,838,186 RGD:1624291
RGD:13792537
RNA-DNA hybrid ribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fen1 flap structure-specific endonuclease 1 JBrowse link 1 226,251,516 226,256,160 RGD:1624291
RGD:13792537
G Rnaseh1 ribonuclease H1 JBrowse link 6 47,916,188 47,925,582 RGD:1624291
RGD:13792537
RGD:1600115
G Rnaseh2a ribonuclease H2, subunit A JBrowse link 19 26,074,980 26,084,780 RGD:1624291
RGD:13792537
RGD:1600115
G Rnaseh2b ribonuclease H2, subunit B JBrowse link 15 45,422,010 45,472,792 RGD:1624291
RGD:13792537
tRNA-intron endonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tsen2 tRNA splicing endonuclease subunit 2 JBrowse link 4 147,455,506 147,490,869 RGD:13792537
G Tsen34 tRNA splicing endonuclease subunit 34 JBrowse link 1 64,023,924 64,031,756 RGD:13792537
G Tsen34l1 tRNA splicing endonuclease subunit 34-like 1 JBrowse link 1 64,092,224 64,100,061 RGD:13792537
G Tsen54 tRNA splicing endonuclease subunit 54 JBrowse link 10 104,358,401 104,366,926 RGD:13792537
tRNA-specific ribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Elac2 elaC ribonuclease Z 2 JBrowse link 10 51,478,378 51,501,167 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19528
    catalytic activity 6039
      catalytic activity, acting on RNA 367
        ribonuclease activity 122
          double-stranded RNA-specific ribonuclease activity + 4
          endoribonuclease activity + 64
          exoribonuclease activity + 41
          oligoribonucleotidase activity 0
          ribonuclease E activity 0
          ribonuclease G activity 0
          ribonuclease MRP activity 2
          ribonuclease R activity 0
          ribonuclease T1 activity 0
          tRNA-specific ribonuclease activity + 16
Path 2
Term Annotations click to browse term
  molecular_function 19528
    catalytic activity 6039
      hydrolase activity 2608
        hydrolase activity, acting on ester bonds 781
          nuclease activity 213
            ribonuclease activity 122
              double-stranded RNA-specific ribonuclease activity + 4
              endoribonuclease activity + 64
              exoribonuclease activity + 41
              oligoribonucleotidase activity 0
              ribonuclease E activity 0
              ribonuclease G activity 0
              ribonuclease MRP activity 2
              ribonuclease R activity 0
              ribonuclease T1 activity 0
              tRNA-specific ribonuclease activity + 16
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.