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ONTOLOGY REPORT - ANNOTATIONS


Term:exoribonuclease activity
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Accession:GO:0004532 term browser browse the term
Definition:Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of an RNA molecule.
Synonyms:xref: reactome:R-HSA-429961 "DCPS scavenges the 7-methylguanosine cap of mRNA"


show annotations for term's descendants       view all columns           Sort by:
 
exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:1624291
RGD:1600115
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
G Exosc1 exosome component 1 JBrowse link 1 261,169,798 261,179,865 RGD:1624291
G Exosc10 exosome component 10 JBrowse link 5 165,374,964 165,398,195 RGD:1624291
G Exosc2 exosome component 2 JBrowse link 3 10,151,734 10,161,997 RGD:1624291
G Exosc3 exosome component 3 JBrowse link 5 60,866,498 60,871,734 RGD:1624291
G Exosc4 exosome component 4 JBrowse link 7 117,390,302 117,393,044 RGD:1624291
G Exosc5 exosome component 5 JBrowse link 1 82,452,104 82,461,607 RGD:1624291
G Exosc6 exosome component 6 JBrowse link 19 43,190,879 43,193,164 RGD:1624291
G Exosc7 exosome component 7 JBrowse link 8 132,204,628 132,229,968 RGD:1624291
G Exosc8 exosome component 8 JBrowse link 2 143,925,643 143,932,240 RGD:1624291
G Exosc9 exosome component 9 JBrowse link 2 123,264,679 123,275,623 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
RGD:1600115
3'-5'-exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Angel1 angel homolog 1 JBrowse link 6 110,644,327 110,681,397 RGD:13792537
G Angel2 angel homolog 2 JBrowse link 13 109,505,021 109,520,976 RGD:13792537
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:13792537
G Cnot6l CCR4-NOT transcription complex, subunit 6-like JBrowse link 14 15,059,101 15,148,255 RGD:13792537
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
G Cnot8 CCR4-NOT transcription complex, subunit 8 JBrowse link 10 43,538,150 43,551,271 RGD:1624291
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease JBrowse link 15 83,466,330 83,494,107 RGD:1624291
RGD:13792537
G Dis3l DIS3-like exosome 3'-5' exoribonuclease JBrowse link 8 69,771,211 69,807,880 RGD:1600115
RGD:13792537
RGD:1624291
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 JBrowse link 9 93,767,837 94,161,106 RGD:1624291
RGD:13792537
G Eri1 exoribonuclease 1 JBrowse link 16 60,307,148 60,327,237 RGD:13792537
G Eri2 ERI1 exoribonuclease family member 2 JBrowse link 1 189,540,145 189,549,891 RGD:13792537
G Eri3 ERI1 exoribonuclease family member 3 JBrowse link 5 136,406,009 136,533,408 RGD:13792537
G Exd2 exonuclease 3'-5' domain containing 2 JBrowse link 6 104,017,620 104,051,442 RGD:1624291
G Exosc10 exosome component 10 JBrowse link 5 165,374,964 165,398,195 RGD:1624291
RGD:13792537
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link 1 140,602,553 140,608,892 RGD:1624291
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 JBrowse link 2 187,302,192 187,311,677 RGD:1624291
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:13792537
G Pan2 poly(A) specific ribonuclease subunit PAN2 JBrowse link 7 2,717,021 2,736,541 RGD:1624291
RGD:1600115
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:13792537
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
RGD:13792537
RGD:1624291
G Pnldc1 PARN like, ribonuclease domain containing 1 JBrowse link 1 48,038,830 48,058,400 RGD:13792537
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 JBrowse link 14 113,530,470 113,561,645 RGD:1624291
RGD:13792537
G Rexo2 RNA exonuclease 2 JBrowse link 8 52,802,604 52,814,321 RGD:1600115
RGD:13792537
G Toe1 target of EGR1, exonuclease JBrowse link 5 135,659,733 135,663,299 RGD:1624291
RGD:13792537
G Usb1 U6 snRNA biogenesis phosphodiesterase 1 JBrowse link 19 10,105,750 10,118,701 RGD:1624291
RGD:13792537
RGD:1600115
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:1624291
5'-3' exoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dcp2 decapping mRNA 2 JBrowse link 18 35,489,274 35,671,676 RGD:1624291
G Xrn1 5'-3' exoribonuclease 1 JBrowse link 8 103,774,125 103,883,563 RGD:1624291
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:1600115
poly(A)-specific ribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot1 CCR4-NOT transcription complex, subunit 1 JBrowse link 19 9,668,186 9,761,605 RGD:1624291
G Cnot2 CCR4-NOT transcription complex, subunit 2 JBrowse link 7 59,526,105 59,617,307 RGD:1624291
G Cnot6 CCR4-NOT transcription complex, subunit 6 JBrowse link 10 35,144,291 35,195,126 RGD:1600115
RGD:13792537
RGD:1624291
G Cnot6l CCR4-NOT transcription complex, subunit 6-like JBrowse link 14 15,059,101 15,148,255 RGD:1624291
RGD:13792537
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
RGD:13792537
G Cnot8 CCR4-NOT transcription complex, subunit 8 JBrowse link 10 43,538,150 43,551,271 RGD:1624291
RGD:13792537
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:1600115
RGD:1624291
G Pan2 poly(A) specific ribonuclease subunit PAN2 JBrowse link 7 2,717,021 2,736,541 RGD:1600115
RGD:13792537
RGD:1624291
G Pan3 poly(A) specific ribonuclease subunit PAN3 JBrowse link 12 9,214,116 9,331,901 RGD:1624291
RGD:13792537
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:1624291
RGD:13792537
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
G Pnldc1 PARN like, ribonuclease domain containing 1 JBrowse link 1 48,038,830 48,058,400 RGD:1624291
RGD:13792537
G Toe1 target of EGR1, exonuclease JBrowse link 5 135,659,733 135,663,299 RGD:1624291
poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usb1 U6 snRNA biogenesis phosphodiesterase 1 JBrowse link 19 10,105,750 10,118,701 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19526
    catalytic activity 6039
      catalytic activity, acting on RNA 367
        ribonuclease activity 122
          exoribonuclease activity 41
            exoribonuclease activity, producing 3'-phosphomonoesters 0
            exoribonuclease activity, producing 5'-phosphomonoesters + 31
Path 2
Term Annotations click to browse term
  molecular_function 19526
    catalytic activity 6039
      hydrolase activity 2608
        hydrolase activity, acting on ester bonds 781
          nuclease activity 213
            exonuclease activity 86
              exoribonuclease activity 41
                exoribonuclease activity, producing 3'-phosphomonoesters 0
                exoribonuclease activity, producing 5'-phosphomonoesters + 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.