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ONTOLOGY REPORT - ANNOTATIONS


Term:mRNA binding
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Accession:GO:0003729 term browser browse the term
Definition:Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
Synonyms:narrow_synonym: base pairing with mRNA
 alt_id: GO:0000499


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mRNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A1cf APOBEC1 complementation factor JBrowse link 1 250,426,027 250,514,245 RGD:631910
RGD:13792537
G AABR07030184.2 RGD:13792537
G AABR07030263.1 RGD:13792537
G AABR07030425.1 RGD:13792537
G AABR07037343.1 RGD:13792537
G AABR07040947.1 RGD:13792537
G AABR07048397.1 RGD:13792537
G AABR07051190.1 RGD:13792537
G AABR07060628.1 RGD:13792537
G AABR07061614.1 RGD:13792537
G AABR07068712.1 RGD:13792537
G AABR07073381.1 RGD:13792537
G AC103056.1 RGD:13792537
G AC126292.3 RGD:13792537
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1624291
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:10041038
G Aqr aquarius intron-binding spliceosomal factor JBrowse link 3 105,570,399 105,640,431 RGD:13792537
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:13514080
G C1qbp complement C1q binding protein JBrowse link 10 57,613,876 57,618,527 RGD:1624291
RGD:13792537
RGD:1600115
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:1624291
RGD:8554221
G Celf1 CUGBP, Elav-like family member 1 JBrowse link 3 79,768,900 79,844,548 RGD:1624291
RGD:13792537
G Celf2 CUGBP, Elav-like family member 2 JBrowse link 17 75,259,269 75,660,154 RGD:13792537
G Celf3 CUGBP, Elav-like family member 3 JBrowse link 2 195,716,373 195,732,872 RGD:13792537
G Celf4 CUGBP, Elav-like family member 4 JBrowse link 18 17,689,090 18,079,835 RGD:1624291
RGD:13792537
G Celf5 CUGBP, Elav-like family member 5 JBrowse link 7 11,095,449 11,119,941 RGD:13792537
G Celf6 CUGBP, Elav-like family member 6 JBrowse link 8 64,364,491 64,428,452 RGD:13792537
G Cluh clustered mitochondria homolog JBrowse link 10 61,432,872 61,454,445 RGD:1624291
RGD:13792537
G Cnbp CCHC-type zinc finger, nucleic acid binding protein JBrowse link 4 119,747,890 119,756,787 RGD:13792537
G Copa COPI coat complex subunit alpha JBrowse link 13 90,467,285 90,508,894 RGD:1624291
RGD:1600115
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 1 143,171,457 143,278,485 RGD:1624291
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 7 60,385,688 60,417,661 RGD:1624291
G Cstf2 cleavage stimulation factor subunit 2 JBrowse link X 104,882,726 104,909,746 RGD:13792537
G Cstf2t cleavage stimulation factor subunit 2, tau variant JBrowse link 1 249,574,954 249,578,520 RGD:13792537
G Cstf3 cleavage stimulation factor subunit 3 JBrowse link 3 94,530,586 94,603,378 RGD:13792537
G Dcp1a decapping mRNA 1A JBrowse link 16 6,542,415 6,583,856 RGD:13792537
G Dcp1b decapping mRNA 1B JBrowse link 4 151,249,654 151,287,018 RGD:13792537
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1624291
G Ddx6 DEAD-box helicase 6 JBrowse link 8 48,924,768 48,961,394 RGD:13792537
G Denr density regulated reinitiation and release factor JBrowse link 12 38,095,717 38,117,758 RGD:13792537
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1624291
RGD:1600115
G Dhx33 DEAH-box helicase 33 JBrowse link 10 57,622,022 57,638,485 RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Dnd1 DND microRNA-mediated repression inhibitor 1 JBrowse link 18 29,608,588 29,611,212 RGD:1624291
RGD:13792537
G Dppa5 developmental pluripotency associated 5 JBrowse link 8 85,711,560 85,713,313 RGD:1624291
RGD:13792537
G Dxo decapping exoribonuclease JBrowse link 20 4,517,307 4,519,391 RGD:1624291
RGD:1600115
G Edc3 enhancer of mRNA decapping 3 JBrowse link 8 62,482,126 62,527,665 RGD:13792537
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 JBrowse link 8 85,838,594 85,841,816 RGD:7242926
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta JBrowse link 3 150,391,455 150,412,179 RGD:13792537
G Eif3a eukaryotic translation initiation factor 3, subunit A JBrowse link 1 282,139,809 282,170,017 RGD:13792537
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:1624291
RGD:13792537
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 JBrowse link 14 83,412,843 83,455,694 RGD:1624291
RGD:13792537
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:1624291
RGD:13792537
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 JBrowse link 1 175,883,362 175,895,510 RGD:13792537
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 JBrowse link 5 156,343,663 156,564,037 RGD:13792537
G Elavl1 ELAV like RNA binding protein 1 JBrowse link 12 2,461,502 2,502,432 RGD:1624291
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 5 130,001,387 130,144,557 RGD:1624291
RGD:9685302
G Esrp1 epithelial splicing regulatory protein 1 JBrowse link 5 24,576,988 24,631,758 RGD:1624291
RGD:1600115
G Esrp2 epithelial splicing regulatory protein 2 JBrowse link 19 38,113,412 38,120,578 RGD:1600115
RGD:1624291
G Fblim1 filamin binding LIM protein 1 JBrowse link 5 160,122,466 160,158,921 RGD:13792537
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11667958
RGD:13792537
RGD:1624291
RGD:1600115
G Fxr1 FMR1 autosomal homolog 1 JBrowse link 2 120,529,716 120,570,356 RGD:1600115
RGD:13792537
G Fxr2 FMR1 autosomal homolog 2 JBrowse link 10 56,237,814 56,257,877 RGD:13792537
G Fyttd1 forty-two-three domain containing 1 JBrowse link 11 71,113,931 71,136,694 RGD:1600115
RGD:13792537
RGD:1624291
G G3bp1 G3BP stress granule assembly factor 1 JBrowse link 10 40,812,858 40,846,252 RGD:1624291
RGD:13792537
G G3bp2 G3BP stress granule assembly factor 2 JBrowse link 14 17,437,145 17,523,254 RGD:13792537
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:10045574
RGD:13792537
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:13792537
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 JBrowse link 3 62,481,222 62,491,356 RGD:625404
RGD:13792537
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 15 28,486,605 28,517,353 RGD:10041038
RGD:1624291
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 14 11,256,163 11,274,684 RGD:1357937
RGD:10041065
RGD:1357938
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:13792537
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like JBrowse link 6 2,698,983 2,729,715 RGD:1624291
RGD:13792537
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:13792537
G Hnrnpr heterogeneous nuclear ribonucleoprotein R JBrowse link 5 154,668,194 154,699,967 RGD:13792537
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:5686808
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 JBrowse link 10 83,774,178 83,823,323 RGD:1600115
RGD:1624291
G Jrk Jrk helix-turn-helix protein JBrowse link 7 115,941,788 115,946,471 RGD:1624291
G Khsrp KH-type splicing regulatory protein JBrowse link 9 10,013,795 10,023,670 RGD:1624291
G Lin28a lin-28 homolog A JBrowse link 5 152,230,343 152,247,873 RGD:1624291
G LOC100360508 ribosomal protein S26-like JBrowse link 13 45,079,857 45,080,277 RGD:13792537
G LOC100361854 ribosomal protein S26-like JBrowse link X 115,495,660 115,496,062 RGD:1624291
RGD:13792537
G LOC100363294 stem-loop binding protein-like JBrowse link 18 27,550,426 27,557,699 RGD:13792537
G LOC100912571 eukaryotic translation initiation factor 4 gamma 1-like JBrowse link 11 82,886,428 82,913,153 RGD:13792537
G LOC108348175 protein quaking-like JBrowse link 1 50,828,585 50,936,459 RGD:13792537
G LOC500827 similar to hypothetical protein FLJ35821 JBrowse link 7 40,316,165 40,350,482 RGD:13792537
G LOC679894 similar to THO complex subunit 2 (Tho2) JBrowse link 14 6,561,962 6,601,906 RGD:13792537
G LOC681410 hypothetical protein LOC681410 JBrowse link 17 6,909,166 6,912,145 RGD:13792537
G Lsm1 LSM1 homolog, mRNA degradation associated JBrowse link 16 71,046,475 71,057,883 RGD:9999194
G Luc7l LUC7-like JBrowse link 10 15,538,878 15,572,651 RGD:13792537
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor JBrowse link 4 66,290,319 66,357,970 RGD:13792537
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor JBrowse link 10 81,991,147 82,027,119 RGD:1624291
RGD:13792537
G Matr3 matrin 3 JBrowse link 18 28,351,691 28,390,764 RGD:13792537
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 65,814,026 65,885,115 RGD:1624291
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1624291
RGD:1600115
G Mettl14 methyltransferase like 14 JBrowse link 2 227,566,811 227,583,047 RGD:1624291
G Mettl3 methyltransferase-like 3 JBrowse link 15 28,710,299 28,721,491 RGD:1624291
G Mir124-1 microRNA 124-1 JBrowse link 15 47,964,298 47,964,382 RGD:1624291
G Mir124-2 microRNA 124-2 JBrowse link 2 102,311,603 102,311,711 RGD:1624291
G Mir124-3 microRNA 124-3 JBrowse link 3 176,406,205 176,406,291 RGD:1624291
G Mir23a microRNA 23a JBrowse link 19 25,318,582 25,318,656 RGD:1624291
G Mrpl13 mitochondrial ribosomal protein L13 JBrowse link 7 95,288,400 95,309,997 RGD:13792537
G Mrps7 mitochondrial ribosomal protein S7 JBrowse link 10 104,155,805 104,158,840 RGD:13792537
G Mvk mevalonate kinase JBrowse link 12 47,904,266 47,920,457 RGD:1600527
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
G Myef2 myelin expression factor 2 JBrowse link 3 117,353,490 117,389,582 RGD:13792537
G Nanos2 nanos C2HC-type zinc finger 2 JBrowse link 1 79,894,450 79,895,910 RGD:1624291
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 5 61,734,118 61,767,098 RGD:13792537
G Ncbp2 nuclear cap binding protein subunit 2 JBrowse link 11 72,071,838 72,103,087 RGD:1600115
RGD:1624291
G Ncbp3 nuclear cap binding subunit 3 JBrowse link 10 59,613,398 59,643,111 RGD:1624291
G NEWGENE_1359268 Smad nuclear interacting protein 1 JBrowse link 5 143,063,206 143,070,899 RGD:13792537
G Noct nocturnin JBrowse link 2 140,286,661 140,306,869 RGD:1624291
RGD:1600115
G Nova1 NOVA alternative splicing regulator 1 JBrowse link 6 66,960,126 67,085,836 RGD:1624291
G Nsrp1 nuclear speckle splicing regulatory protein 1 JBrowse link 10 63,098,115 63,131,779 RGD:1624291
RGD:1600115
G Nudt16 nudix hydrolase 16 JBrowse link 8 113,673,069 113,675,124 RGD:1624291
G Nudt21 nudix hydrolase 21 JBrowse link 19 11,451,366 11,470,637 RGD:1624291
RGD:13792537
RGD:1600115
G Nup98 nucleoporin 98 and 96 precursor JBrowse link 1 167,213,866 167,308,851 RGD:1624291
G Nxf1 nuclear RNA export factor 1 JBrowse link 1 224,957,535 224,970,728 RGD:1624291
RGD:1600115
G Nxf3 nuclear RNA export factor 3 JBrowse link X 106,562,957 106,587,487 RGD:1624291
G Nxf7 nuclear RNA export factor 7 JBrowse link X 106,049,075 106,066,334 RGD:1624291
G Ooep oocyte expressed protein JBrowse link 8 85,719,447 85,720,806 RGD:13792537
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:633375
G Pabpc4 poly(A) binding protein, cytoplasmic 4 JBrowse link 5 140,978,893 140,994,732 RGD:1624291
G Paip2 poly(A) binding protein interacting protein 2 JBrowse link 18 28,397,320 28,415,911 RGD:1624291
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
G Pcbp1 poly(rC) binding protein 1 JBrowse link 4 118,327,185 118,329,223 RGD:1624291
G Pcf11 PCF11 cleavage and polyadenylation factor subunit JBrowse link 1 157,463,014 157,494,134 RGD:13792537
G Piwil1 piwi-like RNA-mediated gene silencing 1 JBrowse link 12 31,608,641 31,629,961 RGD:1624291
G Piwil2 piwi-like RNA-mediated gene silencing 2 JBrowse link 15 52,037,693 52,116,277 RGD:1624291
G Ppie peptidylprolyl isomerase E JBrowse link 5 140,822,141 140,835,244 RGD:1624291
G Ppp1r8 protein phosphatase 1, regulatory subunit 8 JBrowse link 5 151,012,035 151,029,227 RGD:13792537
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link 7 12,663,965 12,673,723 RGD:9999430
RGD:13792537
G Ptbp2 polypyrimidine tract binding protein 2 JBrowse link 2 223,261,444 223,323,075 RGD:1624291
RGD:13792537
G Ptbp3 polypyrimidine tract binding protein 3 JBrowse link 5 76,670,074 76,756,196 RGD:13792537
G Pum1 pumilio RNA-binding family member 1 JBrowse link 5 148,781,239 148,911,776 RGD:13792537
G Pum2 pumilio RNA-binding family member 2 JBrowse link 6 33,786,184 33,865,693 RGD:13792537
G Pum3 pumilio RNA-binding family member 3 JBrowse link 1 245,476,400 245,517,081 RGD:13792537
G Purb purine rich element binding protein B JBrowse link 14 86,736,876 86,739,335 RGD:1600115
RGD:1624291
G Qk quaking JBrowse link 1 50,983,647 51,050,692 RGD:1624291
RGD:13792537
G Rbfox1 RNA binding fox-1 homolog 1 JBrowse link 10 8,312,961 10,437,778 RGD:13792537
G Rbfox2 RNA binding fox-1 homolog 2 JBrowse link 7 118,157,093 118,396,733 RGD:1624291
RGD:13792537
G Rbfox3 RNA binding fox-1 homolog 3 JBrowse link 10 107,517,916 107,850,764 RGD:13792537
G Rbm14 RNA binding motif protein 14 JBrowse link 1 220,048,740 220,067,124 RGD:13792537
G Rbm15 RNA binding motif protein 15 JBrowse link 2 210,079,678 210,090,200 RGD:1624291
G Rbm20 RNA binding motif protein 20 JBrowse link 1 274,391,932 274,589,816 RGD:13792537
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:13792537
G Rbm25 RNA binding motif protein 25 JBrowse link 6 107,117,888 107,165,538 RGD:1624291
G Rbm25l1 RNA binding motif protein 25-like 1 JBrowse link 10 10,457,316 10,460,540 RGD:13792537
G Rbm26 RNA binding motif protein 26 JBrowse link 15 89,262,683 89,339,323 RGD:13792537
G Rbm27 RNA binding motif protein 27 JBrowse link 18 36,596,568 36,657,157 RGD:13792537
G Rbm38 RNA binding motif protein 38 JBrowse link 3 171,037,891 171,050,500 RGD:1624291
RGD:13792537
G Rbm4 RNA binding motif protein 4 JBrowse link 1 220,038,403 220,049,756 RGD:1624291
G Rbm44 RNA binding motif protein 44 JBrowse link 9 98,279,031 98,305,248 RGD:13792537
G Rbm45 RNA binding motif protein 45 JBrowse link 3 63,220,660 63,235,638 RGD:13792537
G Rbm46 RNA binding motif protein 46 JBrowse link 2 181,828,931 181,874,223 RGD:13792537
G Rbm47 RNA binding motif protein 47 JBrowse link 14 43,701,944 43,839,803 RGD:13792537
G Rbm4b RNA binding motif protein 4B JBrowse link 1 220,009,397 220,019,488 RGD:13792537
G Rbm5 RNA binding motif protein 5 JBrowse link 8 116,502,941 116,532,178 RGD:1624291
RGD:1600115
G Rbm8a RNA binding motif protein 8A JBrowse link 2 198,755,261 198,758,028 RGD:1624291
RGD:13792537
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:1600115
G Rbpms RNA binding protein, mRNA processing factor JBrowse link 16 61,954,569 62,109,998 RGD:13792537
G Rbpms2 RNA binding protein, mRNA processing factor 2 JBrowse link 8 71,165,375 71,200,299 RGD:1624291
RGD:13792537
G Rc3h1 ring finger and CCCH-type domains 1 JBrowse link 13 78,723,028 78,794,663 RGD:1624291
G Rc3h2 ring finger and CCCH-type domains 2 JBrowse link 3 21,621,976 21,676,789 RGD:1624291
G RGD1559808 similar to 40S ribosomal protein S26 JBrowse link 9 3,238,038 3,238,497 RGD:13792537
G RGD1559995 similar to developmental pluripotency associated 5 JBrowse link 7 69,982,055 69,982,644 RGD:13792537
G RGD1562415 similar to 40S ribosomal protein S26 JBrowse link 11 73,930,684 73,931,165 RGD:13792537
G RGD1564306 similar to developmental pluripotency associated 5 JBrowse link 3 38,367,481 38,368,110 RGD:13792537
G RGD1565117 similar to 40S ribosomal protein S26 JBrowse link 7 70,444,563 70,446,061 RGD:13792537
G Rida reactive intermediate imine deaminase A homolog JBrowse link 7 73,256,506 73,270,308 RGD:1600115
RGD:1624291
G Rpl13a ribosomal protein L13A JBrowse link 1 101,120,325 101,123,401 RGD:1624291
RGD:13792537
G Rpl35 ribosomal protein L35 JBrowse link 3 23,294,813 23,297,774 RGD:13792537
G Rpl5 ribosomal protein L5 JBrowse link 14 2,860,963 2,867,397 RGD:11040966
G Rpl6 ribosomal protein L6 JBrowse link 12 40,877,578 40,882,032 RGD:11040966
G Rpl7 ribosomal protein L7 JBrowse link 5 2,633,517 2,636,525 RGD:1624291
G Rps13 ribosomal protein S13 JBrowse link 1 185,328,902 185,331,332 RGD:1624291
G Rps2 ribosomal protein S2 JBrowse link 10 14,088,171 14,090,020 RGD:1624291
G Rps26 ribosomal protein S26 JBrowse link 7 3,052,112 3,053,662 RGD:13792537
G Rps3 ribosomal protein S3 JBrowse link 1 164,435,868 164,441,167 RGD:1624291
G Rps3a ribosomal protein S3a JBrowse link 2 185,440,477 185,444,846 RGD:11040966
G Rps5 ribosomal protein S5 JBrowse link 1 65,660,470 65,664,767 RGD:1624291
RGD:13792537
RGD:1600115
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:11040966
G Samd4a sterile alpha motif domain containing 4A JBrowse link 15 23,666,543 23,879,067 RGD:13792537
G Samd4b sterile alpha motif domain containing 4B JBrowse link 1 85,324,017 85,362,266 RGD:1624291
RGD:13792537
G Scaf8 SR-related CTD-associated factor 8 JBrowse link 1 44,017,801 44,120,619 RGD:13792537
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:13792537
G Sf3b6 splicing factor 3B, subunit 6 JBrowse link 6 29,991,232 29,999,668 RGD:1624291
G Slbp stem-loop binding protein JBrowse link 14 82,356,916 82,366,368 RGD:1624291
RGD:13792537
G Slc4a1ap solute carrier family 4 member 1 adaptor protein JBrowse link 6 26,214,083 26,241,337 RGD:13792537
G Slpi secretory leukocyte peptidase inhibitor JBrowse link 3 160,799,979 160,802,228 RGD:1624291
G Smptb polypyrimidine tract-binding protein JBrowse link X 17,484,839 17,486,721 RGD:13792537
G Snip1 Smad nuclear interacting protein 1 JBrowse link 15 19,275,273 19,282,753 RGD:13792537
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link 12 37,531,082 37,538,823 RGD:13792537
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link 1 101,367,470 101,388,153 RGD:13792537
G Snrpc small nuclear ribonucleoprotein polypeptide C JBrowse link 20 7,409,401 7,427,581 RGD:1600115
G Srbd1 S1 RNA binding domain 1 JBrowse link 6 9,266,559 9,459,212 RGD:13792537
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:13792537
G Srrm3 serine/arginine repetitive matrix 3 JBrowse link 12 23,855,400 23,925,793 RGD:13792537
G Srrm4 serine/arginine repetitive matrix 4 JBrowse link 12 45,726,192 45,884,644 RGD:1624291
RGD:13792537
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:1624291
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:13792537
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:13792537
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:13792537
G Supt5h SPT5 homolog, DSIF elongation factor subunit JBrowse link 1 85,437,780 85,466,854 RGD:13792537
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein JBrowse link 8 96,100,692 96,266,342 RGD:13792537
G Tdrd7 tudor domain containing 7 JBrowse link 5 61,557,909 61,631,719 RGD:1624291
RGD:1600115
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:1624291
RGD:13792537
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:1624291
RGD:13792537
G Tpr translocated promoter region, nuclear basket protein JBrowse link 13 67,611,685 67,672,833 RGD:1624291
RGD:1600115
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:1600115
RGD:1624291
G Tsn translin JBrowse link 13 34,240,809 34,251,671 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:5133445
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay JBrowse link X 123,713,327 123,731,431 RGD:1624291
RGD:13792537
G Xpo5 exportin 5 JBrowse link 9 17,125,201 17,163,170 RGD:1624291
G Ybx1 Y box binding protein 1 JBrowse link 5 138,319,754 138,336,721 RGD:1580626
RGD:1600115
G Ybx2 Y box binding protein 2 JBrowse link 10 56,546,689 56,552,339 RGD:1624291
G Zc3h11a zinc finger CCCH-type containing 11A JBrowse link 13 50,196,042 50,234,862 RGD:13792537
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
RGD:1600115
G Zcchc13 zinc finger CCHC-type containing 13 JBrowse link X 74,497,127 74,498,269 RGD:13792537
G Zfp36 zinc finger protein 36 JBrowse link 1 85,380,088 85,382,565 RGD:1624291
G Zfp36l1 zinc finger protein 36, C3H type-like 1 JBrowse link 6 103,308,032 103,313,074 RGD:1624291
RGD:1580602
CCC codon-amino acid adaptor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G mt-Tp mitochondrially encoded tRNA proline JBrowse link MT 15,348 15,415 RGD:2317000
iron-responsive element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aco1 aconitase 1 JBrowse link 5 56,425,076 56,481,218 RGD:1642737
RGD:13792537
RGD:1624291
RGD:1600115
RGD:1642740
RGD:1642738
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:1624291
G Ireb2 iron responsive element binding protein 2 JBrowse link 8 59,450,974 59,503,634 RGD:8554346
RGD:13792537
RGD:1600115
RGD:1624291
mRNA 3'-UTR AU-rich region binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 JBrowse link 4 155,386,367 155,414,034 RGD:1624291
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 1 143,171,457 143,278,485 RGD:1624291
RGD:1600115
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 JBrowse link 14 72,327,929 72,382,519 RGD:1624291
RGD:1600115
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 1 255,660,165 255,842,671 RGD:1624291
G Cpsf1 cleavage and polyadenylation specific factor 1 JBrowse link 7 117,661,779 117,672,373 RGD:1624291
G Dhx36 DEAH-box helicase 36 JBrowse link 2 152,785,844 152,824,549 RGD:1600115
RGD:1624291
G Elavl1 ELAV like RNA binding protein 1 JBrowse link 12 2,461,502 2,502,432 RGD:1600115
RGD:1624291
G Elavl3 ELAV like RNA binding protein 3 JBrowse link 8 23,029,980 23,063,477 RGD:1624291
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 5 130,001,387 130,144,557 RGD:1600115
RGD:1624291
G Exosc4 exosome component 4 JBrowse link 7 117,390,302 117,393,044 RGD:1624291
G Exosc8 exosome component 8 JBrowse link 2 143,925,643 143,932,240 RGD:1624291
G Exosc9 exosome component 9 JBrowse link 2 123,264,679 123,275,623 RGD:1624291
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 RGD:1624291
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 14 11,256,163 11,274,684 RGD:10042966
G Ilf3 interleukin enhancer binding factor 3 JBrowse link 8 22,402,877 22,440,984 RGD:1600115
RGD:1624291
G Khsrp KH-type splicing regulatory protein JBrowse link 9 10,013,795 10,023,670 RGD:1600115
RGD:1624291
G LOC681410 hypothetical protein LOC681410 JBrowse link 17 6,909,166 6,912,145 RGD:1600115
G Mex3d mex-3 RNA binding family member D JBrowse link 7 12,191,902 12,198,841 RGD:1624291
G Nudt21 nudix hydrolase 21 JBrowse link 19 11,451,366 11,470,637 RGD:1600115
RGD:1624291
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
G Rbms3 RNA binding motif, single stranded interacting protein 3 JBrowse link 8 124,833,804 125,645,895 RGD:1624291
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein JBrowse link 4 118,207,845 118,238,246 RGD:1624291
G Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 JBrowse link 1 199,844,854 199,865,843 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
RGD:1600115
G Zfp36 zinc finger protein 36 JBrowse link 1 85,380,088 85,382,565 RGD:1600115
RGD:1624291
G Zfp36l1 zinc finger protein 36, C3H type-like 1 JBrowse link 6 103,308,032 103,313,074 RGD:1580602
RGD:1624291
RGD:1600115
RGD:11344945
G Zfp36l2 zinc finger protein 36, C3H type-like 2 JBrowse link 6 7,417,416 7,423,447 RGD:1624291
mRNA 3'-UTR binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Angel2 angel homolog 2 JBrowse link 13 109,505,021 109,520,976 RGD:1624291
RGD:13792537
G Auh AU RNA binding methylglutaconyl-CoA hydratase JBrowse link 17 12,310,178 12,405,224 RGD:1624291
G Boll boule homolog, RNA binding protein JBrowse link 9 61,836,517 61,975,640 RGD:13792537
G Carhsp1 calcium regulated heat stable protein 1 JBrowse link 10 7,041,510 7,055,107 RGD:1624291
RGD:13792537
RGD:1600115
G Cct5 chaperonin containing TCP1 subunit 5 JBrowse link 2 84,667,578 84,678,730 RGD:1624291
G Cirbp cold inducible RNA binding protein JBrowse link 7 12,400,066 12,405,054 RGD:1600115
RGD:1624291
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 1 143,171,457 143,278,485 RGD:9685150
RGD:13792537
RGD:1600115
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 JBrowse link 14 72,327,929 72,382,519 RGD:13792537
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 1 255,660,165 255,842,671 RGD:1624291
RGD:13792537
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 JBrowse link 10 15,984,520 16,047,209 RGD:13792537
G Cryz crystallin zeta JBrowse link 2 260,884,315 260,911,827 RGD:1601355
RGD:13792537
RGD:1600115
RGD:1624291
G Csdc2 cold shock domain containing C2 JBrowse link 7 123,168,811 123,183,336 RGD:13792537
G Dazap1 DAZ associated protein 1 JBrowse link 7 12,289,895 12,315,897 RGD:13792537
G Dazl deleted in azoospermia-like JBrowse link 9 12,633,983 12,651,017 RGD:1624291
RGD:13792537
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:1624291
G Dhx36 DEAH-box helicase 36 JBrowse link 2 152,785,844 152,824,549 RGD:1600115
RGD:1624291
G Dnd1 DND microRNA-mediated repression inhibitor 1 JBrowse link 18 29,608,588 29,611,212 RGD:1624291
G Elavl1 ELAV like RNA binding protein 1 JBrowse link 12 2,461,502 2,502,432 RGD:625662
RGD:1624291
RGD:11344948
G Elavl4 ELAV like RNA binding protein 4 JBrowse link 5 130,001,387 130,144,557 RGD:9586719
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:13792537
RGD:1624291
G Fus FUS RNA binding protein JBrowse link 1 199,412,805 199,426,705 RGD:1600115
RGD:1624291
G Fxr1 FMR1 autosomal homolog 1 JBrowse link 2 120,529,716 120,570,356 RGD:1624291
RGD:13792537
G Fxr2 FMR1 autosomal homolog 2 JBrowse link 10 56,237,814 56,257,877 RGD:13792537
G Gemin5 gem (nuclear organelle) associated protein 5 JBrowse link 10 43,552,260 43,599,241 RGD:1624291
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:10045969
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:9685424
RGD:1624291
RGD:1600115
RGD:9685477
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link 15 28,486,605 28,517,353 RGD:1624291
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:10002778
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:9854643
G Hnrnpr heterogeneous nuclear ribonucleoprotein R JBrowse link 5 154,668,194 154,699,967 RGD:9854643
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1600115
RGD:1624291
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 JBrowse link 10 83,774,178 83,823,323 RGD:1299544
RGD:1600115
RGD:1624291
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 JBrowse link 11 82,466,071 82,621,105 RGD:1624291
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 JBrowse link 4 78,744,683 78,879,457 RGD:1624291
G Khsrp KH-type splicing regulatory protein JBrowse link 9 10,013,795 10,023,670 RGD:724414
G Larp1 La ribonucleoprotein 1, translational regulator JBrowse link 10 43,435,738 43,501,186 RGD:1624291
G LOC108348134 protein boule-like JBrowse link 9 64,447,890 64,573,812 RGD:13792537
G Mir186 microRNA 186 JBrowse link 2 263,873,759 263,873,844 RGD:1624291
G Mir24-2 microRNA 24-2 JBrowse link 19 25,318,863 25,318,970 RGD:1624291
G Mir874 microRNA 874 JBrowse link 17 7,025,014 7,025,089 RGD:1624291
G Nhp2 NHP2 ribonucleoprotein JBrowse link 10 34,975,701 34,979,082 RGD:10766448
G Nova1 NOVA alternative splicing regulator 1 JBrowse link 6 66,960,126 67,085,836 RGD:1600115
RGD:1624291
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:1624291
RGD:13792537
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like JBrowse link 3 160,410,733 160,447,073 RGD:13792537
G Pabpc2 poly(A) binding protein, cytoplasmic 2 JBrowse link 18 32,964,763 32,967,031 RGD:13792537
G Pabpc4 poly(A) binding protein, cytoplasmic 4 JBrowse link 5 140,978,893 140,994,732 RGD:13792537
G Pabpc4l poly(A) binding protein, cytoplasmic 4-like JBrowse link 2 130,656,212 130,658,202 RGD:13792537
G Pabpc5 poly A binding protein, cytoplasmic 5 JBrowse link X 92,130,292 92,133,756 RGD:13792537
G Pabpc6 poly(A) binding protein, cytoplasmic 6 JBrowse link 1 51,619,875 51,622,951 RGD:13792537
G Pcbp4 poly(rC) binding protein 4 JBrowse link 8 115,154,848 115,165,706 RGD:1624291
G Pum1 pumilio RNA-binding family member 1 JBrowse link 5 148,781,239 148,911,776 RGD:1624291
RGD:13792537
G Pum2 pumilio RNA-binding family member 2 JBrowse link 6 33,786,184 33,865,693 RGD:1624291
RGD:13792537
G Rbfox1 RNA binding fox-1 homolog 1 JBrowse link 10 8,312,961 10,437,778 RGD:1600115
RGD:1624291
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
RGD:13792537
G Rbm38 RNA binding motif protein 38 JBrowse link 3 171,037,891 171,050,500 RGD:1624291
RGD:13792537
G Rbm4 RNA binding motif protein 4 JBrowse link 1 220,038,403 220,049,756 RGD:1624291
G Rbms3 RNA binding motif, single stranded interacting protein 3 JBrowse link 8 124,833,804 125,645,895 RGD:1624291
G Rc3h1 ring finger and CCCH-type domains 1 JBrowse link 13 78,723,028 78,794,663 RGD:1624291
G RGD1562451 similar to Pabpc4_predicted protein JBrowse link 12 3,921,612 3,924,757 RGD:13792537
G Rnf20 ring finger protein 20 JBrowse link 5 64,892,996 64,920,397 RGD:1624291
G Rnf40 ring finger protein 40 JBrowse link 1 199,037,472 199,052,823 RGD:1624291
G Rnps1 RNA binding protein with serine rich domain 1 JBrowse link 10 13,786,339 13,796,720 RGD:1624291
G Rpl41 ribosomal protein L41 JBrowse link 7 2,972,897 2,973,977 RGD:1624291
G Rpl5 ribosomal protein L5 JBrowse link 14 2,860,963 2,867,397 RGD:1624291
G Rps7 ribosomal protein S7 JBrowse link 6 47,899,525 47,904,389 RGD:1624291
G Rsl1d1 ribosomal L1 domain containing 1 JBrowse link 10 4,375,329 4,387,195 RGD:1624291
G Secisbp2 SECIS binding protein 2 JBrowse link 17 13,555,348 13,586,595 RGD:628439
RGD:13792537
RGD:1624291
RGD:1600115
G Secisbp2l SECIS binding protein 2-like JBrowse link 3 118,007,950 118,051,403 RGD:13792537
G Serbp1 Serpine1 mRNA binding protein 1 JBrowse link 4 98,027,563 98,044,717 RGD:1624291
RGD:1600115
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein JBrowse link 8 96,100,692 96,266,342 RGD:9854643
G Taf15 TATA-box binding protein associated factor 15 JBrowse link 10 70,689,863 70,721,892 RGD:1624291
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:1624291
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link 1 225,151,462 225,162,445 RGD:1624291
RGD:1600115
G Utp23 UTP23, small subunit processome component JBrowse link 7 91,384,329 91,389,605 RGD:1624291
G Ybx2 Y box binding protein 2 JBrowse link 10 56,546,689 56,552,339 RGD:1624291
G Ybx3 Y box binding protein 3 JBrowse link 4 165,606,819 165,630,041 RGD:1624291
RGD:1600115
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1600115
RGD:1624291
G Zfp36 zinc finger protein 36 JBrowse link 1 85,380,088 85,382,565 RGD:11344948
G Zfp385a zinc finger protein 385A JBrowse link 7 144,939,616 144,966,364 RGD:1624291
RGD:13792537
mRNA 5'-UTR binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005506.1 RGD:13792537
G AABR07056611.1 RGD:13792537
G Aco1 aconitase 1 JBrowse link 5 56,425,076 56,481,218 RGD:1642740
G Cct5 chaperonin containing TCP1 subunit 5 JBrowse link 2 84,667,578 84,678,730 RGD:1624291
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1624291
G Dhx36 DEAH-box helicase 36 JBrowse link 2 152,785,844 152,824,549 RGD:1600115
RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:1624291
G Gnl3 G protein nucleolar 3 JBrowse link 16 7,097,580 7,103,518 RGD:1624291
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 JBrowse link 10 83,774,178 83,823,323 RGD:1624291
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 JBrowse link 11 82,466,071 82,621,105 RGD:1624291
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 JBrowse link 4 78,744,683 78,879,457 RGD:1624291
G Larp1 La ribonucleoprotein 1, translational regulator JBrowse link 10 43,435,738 43,501,186 RGD:1624291
G Larp6 La ribonucleoprotein 6, translational regulator JBrowse link 8 65,611,570 65,632,706 RGD:1624291
G LOC100911847 40S ribosomal protein S14-like JBrowse link 5 144,083,030 144,083,602 RGD:13792537
G Mrps11 mitochondrial ribosomal protein S11 JBrowse link 1 140,477,645 140,487,249 RGD:13792537
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1624291
RGD:1600115
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:1600115
RGD:1624291
G Rara retinoic acid receptor, alpha JBrowse link 10 86,838,819 86,884,224 RGD:2314253
G Rpl26 ribosomal protein L26 JBrowse link 10 55,492,417 55,495,547 RGD:1624291
G Rpl41 ribosomal protein L41 JBrowse link 7 2,972,897 2,973,977 RGD:1624291
G Rpl5 ribosomal protein L5 JBrowse link 14 2,860,963 2,867,397 RGD:1624291
G Rps13 ribosomal protein S13 JBrowse link 1 185,328,902 185,331,332 RGD:1624291
G Rps14 ribosomal protein S14 JBrowse link 18 56,042,532 56,047,316 RGD:1624291
RGD:13792537
G Rps3a ribosomal protein S3a JBrowse link 2 185,440,477 185,444,846 RGD:1624291
G Rps7 ribosomal protein S7 JBrowse link 6 47,899,525 47,904,389 RGD:1624291
G Rsl1d1 ribosomal L1 domain containing 1 JBrowse link 10 4,375,329 4,387,195 RGD:1624291
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link 10 47,030,813 47,059,216 RGD:1624291
RGD:13792537
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein JBrowse link 8 96,100,692 96,266,342 RGD:10059417
RGD:13792537
G Utp23 UTP23, small subunit processome component JBrowse link 7 91,384,329 91,389,605 RGD:1624291
mRNA cap binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:1600115
RGD:1624291
G Eif3d eukaryotic translation initiation factor 3, subunit D JBrowse link 7 119,188,189 119,200,578 RGD:1624291
RGD:1600115
mRNA CDS binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:10058976
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:10058976
G Hnrnpl heterogeneous nuclear ribonucleoprotein L JBrowse link 1 86,994,090 87,006,776 RGD:10058976
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
G Unk unk zinc finger JBrowse link 10 104,582,531 104,613,102 RGD:1624291
RGD:13792537
selenocysteine insertion sequence binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eefsec eukaryotic elongation factor, selenocysteine-tRNA-specific JBrowse link 4 120,194,335 120,390,203 RGD:1624291
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:10044260
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:5133727
G Rpl30 ribosomal protein L30 JBrowse link 7 73,213,538 73,216,431 RGD:11038818
G Secisbp2 SECIS binding protein 2 JBrowse link 17 13,555,348 13,586,595 RGD:1624291
RGD:13792537
RGD:1600115
RGD:11038818
G Secisbp2l SECIS binding protein 2-like JBrowse link 3 118,007,950 118,051,403 RGD:13792537
sequence-specific mRNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Etf1 eukaryotic translation termination factor 1 JBrowse link 18 27,698,693 27,725,694 RGD:1624291
RGD:13792537
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:1624291
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:625404
G Larp6 La ribonucleoprotein 6, translational regulator JBrowse link 8 65,611,570 65,632,706 RGD:1624291
G Lin28a lin-28 homolog A JBrowse link 5 152,230,343 152,247,873 RGD:1624291
G Mvk mevalonate kinase JBrowse link 12 47,904,266 47,920,457 RGD:12793000
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 8 21,890,214 21,896,045 RGD:1600115
RGD:1624291
G Srsf3 serine and arginine rich splicing factor 3 JBrowse link 20 6,288,285 6,298,218 RGD:10059618
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:10059618
G Ssb small RNA binding exonuclease protection factor La JBrowse link 3 56,092,425 56,102,008 RGD:1624291
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:1624291
triplet codon-amino acid adaptor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G mt-Th mitochondrially encoded tRNA histidine JBrowse link MT 11,538 11,605 RGD:631900

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19526
    binding 15909
      heterocyclic compound binding 5697
        nucleic acid binding 3636
          RNA binding 1313
            mRNA binding 308
              iron-responsive element binding 3
              mRNA 3'-UTR binding + 96
              mRNA 5'-UTR binding 29
              mRNA CDS binding 5
              mRNA binding involved in posttranscriptional gene silencing 0
              mRNA cap binding 2
              selenocysteine insertion sequence binding 6
              sequence-specific mRNA binding 14
              triplet codon-amino acid adaptor activity + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.