Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:DNA clamp loader activity
go back to main search page
Accession:GO:0003689 term browser browse the term
Definition:Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex, driven by ATP hydrolysis.
Synonyms:exact_synonym: DNA clamp loading ATPase activity
 narrow_synonym: PCNA loading activity;   PCNA loading complex activity
 related_synonym: DNA-protein loading ATPase activity
 alt_id: GO:0033170
 xref: Reactome:R-HSA-174439 "Loading of PCNA - Sliding Clamp Formation on the C-strand of the telomere";   reactome:R-HSA-176264 "Recruitment of the Rad9-Hus1-Rad1 complex to DNA"


show annotations for term's descendants           Sort by:
DNA clamp loader activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 contributes_to ISO
IBA		 (PMID:12930902)
GO_REF:0000033		 RGD
GO_Central		 PMID:12930902 GO_REF:0000033 NCBI chr10:14,743,006...14,751,044
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 contributes_to ISO
ISS		 (PMID:12930902)
GO_REF:0000024		 RGD
UniProt		 PMID:12930902 GO_REF:0000024 NCBI chr19:34,782,005...34,792,306
Ensembl chr19:34,781,856...34,792,578 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 contributes_to ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:86,482,588...86,498,212
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G Rad17 RAD17 checkpoint clamp loader component contributes_to IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:31,764,260...31,794,542
Ensembl chr 2:31,764,261...31,794,072 		JBrowse link
G Rfc1 replication factor C subunit 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:42,966,279...43,041,372
Ensembl chr14:42,966,324...43,041,370 		JBrowse link
G Rfc2 replication factor C subunit 2 contributes_to
enables		 ISO
ISS
IBA
IEA		 (PMID:12930902)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118		 RGD
UniProt
GO_Central
TreeGrafter		 PMID:12930902 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr12:22,120,449...22,133,576
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 contributes_to ISO
IBA		 (PMID:12930902)
GO_REF:0000033		 RGD
GO_Central		 PMID:12930902 GO_REF:0000033 NCBI chr12:1,000,987...1,011,778
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 contributes_to ISO
IBA		 (PMID:12930902)
GO_REF:0000033		 RGD
GO_Central		 PMID:12930902 GO_REF:0000033 NCBI chr11:77,749,642...77,764,123
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 contributes_to ISO
IBA		 (PMID:12930902)
GO_REF:0000033		 RGD
GO_Central		 PMID:12930902 GO_REF:0000033 NCBI chr12:39,207,484...39,217,041
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    ATP-dependent activity 632
      ATP-dependent activity, acting on DNA 128
        DNA clamp loader activity 9
Path 2
Term Annotations click to browse term
  molecular_function 21010
    catalytic activity 6145
      catalytic activity, acting on a nucleic acid 642
        catalytic activity, acting on DNA 260
          ATP-dependent activity, acting on DNA 128
            DNA clamp loader activity 9
paths to the root