Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:epithelial cell morphogenesis
go back to main search page
Accession:GO:0003382 term browser browse the term
Definition:The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.

show annotations for term's descendants           Sort by:
 
epithelial cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor IEA
ISO		 GO_REF:0000107
MGI:1922269 (MGI:5050497|PMID:21084446)		 Ensembl
RGD		 PMID:21084446 GO_REF:0000107 MGI:5050497 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026 		JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO MGI:3839578 (MGI:3838423|PMID:19251658) RGD PMID:19251658 MGI:3838423 NCBI chr 6:131,834,097...131,927,251
Ensembl chr 6:131,834,097...131,926,272 		JBrowse link
G Cdh1 cadherin 1 ISO (MGI:5449145|PMID:22766025) RGD PMID:22766025 MGI:5449145 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395 		JBrowse link
G Cgn cingulin ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:195,909,691...195,937,130
Ensembl chr 2:195,909,626...195,935,878 		JBrowse link
G Cldn3 claudin 3 ISS
ISO		 GO_REF:0000024
(MGI:5499697|PMID:22696678)		 UniProt
RGD		 PMID:22696678 GO_REF:0000024 MGI:5499697 NCBI chr12:21,831,341...21,832,813
Ensembl chr12:21,831,342...21,832,813 		JBrowse link
G Dact2 dishevelled-binding antagonist of beta-catenin 2 ISO (MGI:4833906|PMID:20685821) RGD PMID:20685821 MGI:4833906 NCBI chr 1:56,159,435...56,169,443
Ensembl chr 1:56,159,426...56,168,351 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968 		JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921 		JBrowse link
G Flnb filamin B ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)		 RGD PMID:22696678 PMID:25152456 MGI:5499697 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856 		JBrowse link
G Hrh2 histamine receptor H 2 ISO MGI:2182949 (MGI:1860000|PMID:10862789) RGD PMID:10862789 MGI:1860000 NCBI chr17:10,912,959...10,931,389
Ensembl chr17:10,921,507...10,952,441 		JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
G Jmjd1c jumonji domain containing 1C ISO MGI:5544070 (MGI:5529185|PMID:24006281) RGD PMID:24006281 MGI:5529185 NCBI chr20:22,751,743...22,914,080
Ensembl chr20:22,751,743...22,882,672 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:5467663|PMID:23201579) RGD PMID:23201579 MGI:5467663 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207 		JBrowse link
G Mir205 microRNA 205 ISO (MGI:4439000|PMID:20103531) RGD PMID:20103531 MGI:4439000 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390 		JBrowse link
G Palld palladin, cytoskeletal associated protein ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:26,164,969...26,736,704 JBrowse link
G Pof1b POF1B, actin binding protein ISO (PMID:21940798) RGD PMID:21940798 NCBI chr  X:84,099,618...84,167,717
Ensembl chr  X:84,099,618...84,167,717 		JBrowse link
G Rab25 RAB25, member RAS oncogene family ISO (MGI:5499697|PMID:22696678) RGD PMID:22696678 MGI:5499697 NCBI chr 2:187,903,301...187,909,398
Ensembl chr 2:187,903,307...187,909,394 		JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873 		JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 ISS
ISO		 GO_REF:0000024
(MGI:5507904|PMID:23264467)		 UniProt
RGD		 PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:37,490,320...37,528,393
Ensembl chr12:37,490,584...37,528,784 		JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 ISS
ISO		 GO_REF:0000024
(MGI:5507904|PMID:23264467)		 UniProt
RGD		 PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:37,544,918...37,556,453
Ensembl chr12:37,544,918...37,556,453 		JBrowse link
G Rnase10 ribonuclease A family member 10 ISO MGI:88064 (MGI:5050497|PMID:21084446) RGD PMID:21084446 MGI:5050497 NCBI chr15:27,930,581...27,933,873
Ensembl chr15:27,933,211...27,933,849 		JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 ISO
IBA
ISS		 (PMID:26231217)
PMID:21873635
(MGI:5697095|PMID:26231217)
GO_REF:0000024		 RGD
UniProt		 PMID:26231217, PMID:21873635 GO_REF:0000024 MGI:5697095, RGD:13792537 NCBI chr 1:87,260,832...87,467,846
Ensembl chr 1:87,260,835...87,468,288 		JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 IEA
ISO		 GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)		 InterPro
RGD		 PMID:21991385 GO_REF:0000002 MGI:5297312 NCBI chr  X:112,268,786...112,303,849
Ensembl chr  X:112,270,986...112,303,846 		JBrowse link
apical constriction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:124,905,811...125,028,011
Ensembl chr 6:124,905,808...125,027,553 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO (MGI:4438998|PMID:20103536) RGD PMID:20103536 MGI:4438998 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968 		JBrowse link
G Frmd6 FERM domain containing 6 IEA
ISO		 GO_REF:0000107
MGI:107927|MGI:2135608 (MGI:5086051|PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr 6:93,281,382...93,358,888
Ensembl chr 6:93,281,408...93,358,840 		JBrowse link
G Pard3 par-3 family cell polarity regulator ISO MGI:107927|MGI:2442579 (MGI:5086051|PMID:21685893) RGD PMID:21685893 MGI:5086051 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 IEA
ISO		 GO_REF:0000107
MGI:2135608|MGI:2442579 (MGI:5086051|PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190 		JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 ISO MGI:5500046 (MGI:5486234|PMID:23372835) RGD PMID:23372835 MGI:5486234 NCBI chr 2:27,107,263...27,236,336
Ensembl chr 2:27,107,318...27,236,672 		JBrowse link
G Clic4 chloride intracellular channel 4 IEA
ISO		 GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)		 Ensembl
RGD		 PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869 		JBrowse link
G Cnmd chondromodulin ISO
IBA		 (MGI:2656472|PMID:12714610)
PMID:21873635		 RGD PMID:12714610, PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr15:61,923,291...61,947,840
Ensembl chr15:61,923,299...61,947,764 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain ISO
IBA		 (MGI:3046127|PMID:15188432)
PMID:21873635		 RGD PMID:15188432, PMID:21873635 MGI:3046127, RGD:13792537 NCBI chr20:12,225,202...12,332,858
Ensembl chr20:12,225,202...12,332,858 		JBrowse link
G Col22a1 collagen type XXII alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,014,896...113,251,165
Ensembl chr 7:113,015,747...113,228,439 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:251,200,686...251,436,254
Ensembl chr 2:251,200,686...251,434,932 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690 		JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718 		JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:2157527 (MGI:4940123|PMID:21285373) RGD PMID:21285373 MGI:4940123 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924 		JBrowse link
G LOC108348074 collagen alpha-1(XV) chain-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:64,475,618...64,543,510 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO		 GO_REF:0000107
(PMID:14500721)		 Ensembl
RGD		 PMID:14500721 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665 		JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 ISO MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982 		JBrowse link
G Stc1 stanniocalcin 1 ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162 		JBrowse link
G Tnmd tenomodulin ISO
IBA		 (MGI:2656472|PMID:12714610)
PMID:21873635		 RGD PMID:12714610, PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr  X:104,684,676...104,700,173
Ensembl chr  X:104,684,676...104,700,173 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4340678 (MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:5634845 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 ISO MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO MGI:1338031 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    developmental process 6822
      anatomical structure development 6288
        cell development 2446
          epithelial cell development 286
            epithelial cell morphogenesis 49
              apical constriction + 5
              endothelial cell morphogenesis 18
              epithelial cell morphogenesis involved in gastrulation + 0
              epithelial cell morphogenesis involved in placental branching 3
Path 2
Term Annotations click to browse term
  biological_process 20044
    developmental process 6822
      anatomical structure development 6288
        tissue development 2110
          epithelium development 1270
            epithelial cell differentiation 713
              epithelial cell development 286
                epithelial cell morphogenesis 49
                  apical constriction + 5
                  endothelial cell morphogenesis 18
                  epithelial cell morphogenesis involved in gastrulation + 0
                  epithelial cell morphogenesis involved in placental branching 3
paths to the root