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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell morphogenesis
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Accession:GO:0003382 term browser browse the term
Definition:The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.



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epithelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1922269 (MGI:5050497|PMID:21084446)
Ensembl
RGD
PMID:21084446 GO_REF:0000107 MGI:5050497 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO MGI:3839578 (MGI:3838423|PMID:19251658) RGD PMID:19251658 MGI:3838423 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) RGD PMID:22766025 MGI:5449145 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:182,308,389...182,335,747
Ensembl chr 2:182,308,714...182,334,645
JBrowse link
G Cldn3 claudin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5499697|PMID:22696678)
UniProt
RGD
PMID:22696678 GO_REF:0000024 MGI:5499697 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Dact2 dishevelled-binding antagonist of beta-catenin 2 involved_in ISO (MGI:4833906|PMID:20685821) RGD PMID:20685821 MGI:4833906 NCBI chr 1:55,181,023...55,191,026
Ensembl chr 1:55,181,024...55,191,096
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)
RGD PMID:22696678 PMID:25152456 MGI:5499697 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949 (MGI:1860000|PMID:10862789) RGD PMID:10862789 MGI:1860000 NCBI chr17:10,368,355...10,407,791
Ensembl chr17:10,368,298...10,407,631
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (MGI:5529185|PMID:24006281) RGD PMID:24006281 MGI:5529185 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO MGI:2676654 (MGI:5467663|PMID:23201579) RGD PMID:23201579 MGI:5467663 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:4439000|PMID:20103531) RGD PMID:20103531 MGI:4439000 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Palld palladin, cytoskeletal associated protein acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381
JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA
(PMID:21940798)
PMID:21873635
RGD PMID:21940798 PMID:21873635 RGD:13792537 NCBI chr  X:77,683,128...77,749,827
Ensembl chr  X:77,683,128...77,749,688
JBrowse link
G Rab25 RAB25, member RAS oncogene family involved_in ISO (MGI:5499697|PMID:22696678) RGD PMID:22696678 MGI:5499697 NCBI chr 2:174,000,323...174,006,422
Ensembl chr 2:174,000,323...174,006,422
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:32,071,870...32,109,687
Ensembl chr12:32,071,693...32,109,938
JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:32,125,908...32,137,426
Ensembl chr12:32,125,886...32,137,418
JBrowse link
G Rnase10 ribonuclease A family member 10 acts_upstream_of_or_within ISO MGI:88064 (MGI:5050497|PMID:21084446) RGD PMID:21084446 MGI:5050497 NCBI chr15:24,225,293...24,228,805
Ensembl chr15:24,226,691...24,228,561
JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 involved_in ISO
IBA
ISS
(PMID:26231217)
(MGI:5697095|PMID:26231217)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:26231217 PMID:21873635 GO_REF:0000024 MGI:5697095, RGD:13792537 NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)
InterPro
RGD
PMID:21991385 GO_REF:0000002 MGI:5297312 NCBI chr  X:104,607,031...104,640,128
Ensembl chr  X:104,607,031...104,639,249
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:120,169,752...120,289,459
Ensembl chr 6:120,169,738...120,289,555
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:4438998|PMID:20103536) RGD PMID:20103536 MGI:4438998 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Frmd6 FERM domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107927|MGI:2135608 (MGI:5086051|PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr 6:89,345,975...89,419,579
Ensembl chr 6:89,346,035...89,419,579
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO MGI:107927|MGI:2442579 (MGI:5086051|PMID:21685893) RGD PMID:21685893 MGI:5086051 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2135608|MGI:2442579 (MGI:5086051|PMID:21685893)
Ensembl
RGD
PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 acts_upstream_of_or_within ISO MGI:5500046 (MGI:5486234|PMID:23372835) RGD PMID:23372835 MGI:5486234 NCBI chr 2:146,740,336...146,850,918
Ensembl chr 2:146,739,631...146,850,819
JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl
RGD
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Cnmd chondromodulin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2656472|PMID:12714610)
RGD PMID:12714610 PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr15:55,041,548...55,066,297
Ensembl chr15:55,041,561...55,066,297
JBrowse link
G Col15a1 collagen type XV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3046127|PMID:15188432)
RGD PMID:15188432 PMID:21873635 MGI:3046127, RGD:13792537 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
JBrowse link
G Col22a1 collagen type XXII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462
JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:4940123|PMID:21285373) RGD PMID:21285373 MGI:4940123 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA
(PMID:14500721)
GO_REF:0000107
RGD
Ensembl
PMID:14500721 GO_REF:0000107 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
G Tnmd tenomodulin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:2656472|PMID:12714610)
RGD PMID:12714610 PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr  X:97,057,137...97,072,634
Ensembl chr  X:97,057,137...97,072,634
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4340678 (MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:5634845 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        cell development 2485
          epithelial cell development 257
            epithelial cell morphogenesis 48
              apical constriction + 5
              endothelial cell morphogenesis 17
              epithelial cell morphogenesis involved in gastrulation + 0
              epithelial cell morphogenesis involved in placental branching 3
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        tissue development 2136
          epithelium development 1321
            epithelial cell differentiation 741
              epithelial cell development 257
                epithelial cell morphogenesis 48
                  apical constriction + 5
                  endothelial cell morphogenesis 17
                  epithelial cell morphogenesis involved in gastrulation + 0
                  epithelial cell morphogenesis involved in placental branching 3
paths to the root