Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:epithelial cell morphogenesis
go back to main search page
Accession:GO:0003382 term browser browse the term
Definition:The change in form that occurs when an epithelial cell progresses from its initial formation to its mature state.


show annotations for term's descendants           Sort by:
 
epithelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1922269 (MGI:5050497|PMID:21084446)		 Ensembl
RGD		 PMID:21084446 GO_REF:0000107 MGI:5050497 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO MGI:3839578 (MGI:3838423|PMID:19251658) RGD PMID:19251658 MGI:3838423 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) RGD PMID:22766025 MGI:5449145 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:182,308,389...182,335,747
Ensembl chr 2:182,308,714...182,334,645 		JBrowse link
G Cldn3 claudin 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5499697|PMID:22696678)		 UniProt
RGD		 PMID:22696678 GO_REF:0000024 MGI:5499697 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001 		JBrowse link
G Dact2 dishevelled-binding antagonist of beta-catenin 2 involved_in ISO (MGI:4833906|PMID:20685821) RGD PMID:20685821 MGI:4833906 NCBI chr 1:55,181,023...55,191,026
Ensembl chr 1:55,181,024...55,191,096 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107 		JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)		 RGD PMID:22696678 PMID:25152456 MGI:5499697 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Hrh2 histamine receptor H 2 acts_upstream_of_or_within ISO MGI:2182949 (MGI:1860000|PMID:10862789) RGD PMID:10862789 MGI:1860000 NCBI chr17:10,368,355...10,407,791
Ensembl chr17:10,368,298...10,407,631 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (MGI:5529185|PMID:24006281) RGD PMID:24006281 MGI:5529185 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO MGI:2676654 (MGI:5467663|PMID:23201579) RGD PMID:23201579 MGI:5467663 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463 		JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:4439000|PMID:20103531) RGD PMID:20103531 MGI:4439000 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985 		JBrowse link
G Palld palladin, cytoskeletal associated protein acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) RGD PMID:24012369 MGI:5516520 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) RGD PMID:32698519 NCBI chr 9:22,547,396...23,037,443
Ensembl chr 9:22,549,513...23,037,381 		JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IBA		 (PMID:21940798)
PMID:21873635		 RGD PMID:21940798 PMID:21873635 RGD:13792537 NCBI chr  X:77,683,128...77,749,827
Ensembl chr  X:77,683,128...77,749,688 		JBrowse link
G Rab25 RAB25, member RAS oncogene family involved_in ISO (MGI:5499697|PMID:22696678) RGD PMID:22696678 MGI:5499697 NCBI chr 2:174,000,323...174,006,422
Ensembl chr 2:174,000,323...174,006,422 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5507904|PMID:23264467)		 UniProt
RGD		 PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:32,071,870...32,109,687
Ensembl chr12:32,071,693...32,109,938 		JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5507904|PMID:23264467)		 UniProt
RGD		 PMID:23264467 GO_REF:0000024 MGI:5507904 NCBI chr12:32,125,908...32,137,426
Ensembl chr12:32,125,886...32,137,418 		JBrowse link
G Rnase10 ribonuclease A family member 10 acts_upstream_of_or_within ISO MGI:88064 (MGI:5050497|PMID:21084446) RGD PMID:21084446 MGI:5050497 NCBI chr15:24,225,293...24,228,805
Ensembl chr15:24,226,691...24,228,561 		JBrowse link
G Sipa1l3 signal-induced proliferation-associated 1 like 3 involved_in ISO
IBA
ISS		 (PMID:26231217)
(MGI:5697095|PMID:26231217)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:26231217 PMID:21873635 GO_REF:0000024 MGI:5697095, RGD:13792537 NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802 		JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:5297726 (MGI:5297312|PMID:21991385)		 InterPro
RGD		 PMID:21991385 GO_REF:0000002 MGI:5297312 NCBI chr  X:104,607,031...104,640,128
Ensembl chr  X:104,607,031...104,639,249 		JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) RGD PMID:30948426 NCBI chr 6:120,169,752...120,289,459
Ensembl chr 6:120,169,738...120,289,555 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:4438998|PMID:20103536) RGD PMID:20103536 MGI:4438998 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360 		JBrowse link
G Frmd6 FERM domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:107927|MGI:2135608 (MGI:5086051|PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr 6:89,345,975...89,419,579
Ensembl chr 6:89,346,035...89,419,579 		JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO MGI:107927|MGI:2442579 (MGI:5086051|PMID:21685893) RGD PMID:21685893 MGI:5086051 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2135608|MGI:2442579 (MGI:5086051|PMID:21685893)		 Ensembl
RGD		 PMID:21685893 GO_REF:0000107 MGI:5086051 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 acts_upstream_of_or_within ISO MGI:5500046 (MGI:5486234|PMID:23372835) RGD PMID:23372835 MGI:5486234 NCBI chr 2:146,740,336...146,850,918
Ensembl chr 2:146,739,631...146,850,819 		JBrowse link
G Clic4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)		 Ensembl
RGD		 PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452 		JBrowse link
G Cnmd chondromodulin involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:2656472|PMID:12714610)		 RGD PMID:12714610 PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr15:55,041,548...55,066,297
Ensembl chr15:55,041,561...55,066,297 		JBrowse link
G Col15a1 collagen type XV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,501,963...61,607,591
Ensembl chr 5:61,501,963...61,607,591 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:3046127|PMID:15188432)		 RGD PMID:15188432 PMID:21873635 MGI:3046127, RGD:13792537 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Col22a1 collagen type XXII alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:103,730,939...103,968,452
Ensembl chr 7:103,731,037...103,968,462 		JBrowse link
G Col24a1 collagen type XXIV alpha 1 chain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:234,212,256...234,469,445
Ensembl chr 2:234,212,324...234,469,441 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051 		JBrowse link
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091 		JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO MGI:2679939 (MGI:3759000|PMID:17717145) RGD PMID:17717145 MGI:3759000 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:4940123|PMID:21285373) RGD PMID:21285373 MGI:4940123 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO
IEA		 (PMID:14500721)
GO_REF:0000107		 RGD
Ensembl		 PMID:14500721 GO_REF:0000107 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Notch4 notch receptor 4 IDA RGD PMID:10964583 RGD:1304484 NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2677448 (MGI:3723364|PMID:17563397) RGD PMID:17563397 MGI:3723364 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571) RGD PMID:16467571 MGI:3618677 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960 		JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:14500721) RGD PMID:14500721 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264 		JBrowse link
G Tnmd tenomodulin involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:2656472|PMID:12714610)		 RGD PMID:12714610 PMID:21873635 MGI:2656472, RGD:13792537 NCBI chr  X:97,057,137...97,072,634
Ensembl chr  X:97,057,137...97,072,634 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4340678 (MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:5634845 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        cell development 2485
          epithelial cell development 257
            epithelial cell morphogenesis 48
              apical constriction + 5
              endothelial cell morphogenesis 17
              epithelial cell morphogenesis involved in gastrulation + 0
              epithelial cell morphogenesis involved in placental branching 3
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        tissue development 2136
          epithelium development 1321
            epithelial cell differentiation 741
              epithelial cell development 257
                epithelial cell morphogenesis 48
                  apical constriction + 5
                  endothelial cell morphogenesis 17
                  epithelial cell morphogenesis involved in gastrulation + 0
                  epithelial cell morphogenesis involved in placental branching 3
paths to the root