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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cilium beat frequency
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Accession:GO:0003356 term browser browse the term
Definition:Any process that modulates the frequency of cilium movement, the directed, self-propelled movement of a cilium.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent.
Synonyms:exact_synonym: regulation of microtubule-based flagellum beat frequency
 related_synonym: regulation of flagellum beat frequency
 alt_id: GO:0036144



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regulation of cilium beat frequency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030901.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:23255504) RGD PMID:23255504 NCBI chr 2:116,665,261...116,703,364
Ensembl chr 2:116,665,261...116,703,350
JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:21131974), (PMID:23255504) RGD PMID:21131974 PMID:23255504 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243
JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:6452763|PMID:32376681)
UniProt
RGD
PMID:32376681 PMID:21873635 GO_REF:0000024 MGI:6452763, RGD:13792537 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090
JBrowse link
G Cfap43 cilia and flagella associated protein 43 involved_in ISO (MGI:6402702|PMID:31884020) RGD PMID:31884020 MGI:6402702 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443
JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA
(PMID:19944400)
GO_REF:0000107
RGD
Ensembl
PMID:19944400 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 involved_in ISO (PMID:18022865), (PMID:22184204), (PMID:22499950) RGD PMID:18022865 PMID:22184204 PMID:22499950 NCBI chr 6:138,839,175...139,155,554
Ensembl chr 6:138,839,177...139,155,536
JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 involved_in ISO (PMID:24203976) RGD PMID:24203976 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (MGI:5644628|PMID:25333478) RGD PMID:25333478 MGI:5644628 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
regulation of cilium beat frequency involved in ciliary motility term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO (MGI:3776933|PMID:18299575) RGD PMID:18299575 MGI:3776933 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in ISO (MGI:3776933|PMID:18299575) RGD PMID:18299575 MGI:3776933 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in ISO (MGI:3776933|PMID:18299575) RGD PMID:18299575 MGI:3776933 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Catsper1 cation channel, sperm associated 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2387461 (MGI:2682516|PMID:14657352)
RGD PMID:14657352 PMID:21873635 MGI:2682516, RGD:13792537 NCBI chr 1:202,643,009...202,652,059
Ensembl chr 1:202,643,038...202,651,824
JBrowse link
G Cfap20 cilia and flagella associated protein 20 involved_in ISO
IEA
IBA
ISS
(PMID:20118210)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20118210 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr19:9,608,851...9,622,562
Ensembl chr19:9,608,859...9,622,558
JBrowse link
G Cfap45 cilia and flagella associated protein 45 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:6509073 (MGI:6479264|PMID:33139725)
GO_REF:0000107
RGD
Ensembl
PMID:33139725 GO_REF:0000107 MGI:6479264 NCBI chr13:84,989,474...85,012,880
Ensembl chr13:84,981,728...85,012,878
JBrowse link
G Gas2l2 growth arrest-specific 2 like 2 involved_in ISO (PMID:30665704)
(MGI:6330843|PMID:30665704)
RGD PMID:30665704 MGI:6330843 NCBI chr10:68,222,475...68,229,877
Ensembl chr10:68,222,475...68,229,881
JBrowse link
G Mkks MKKS centrosomal shuttling protein involved_in ISO (MGI:3776933|PMID:18299575) RGD PMID:18299575 MGI:3776933 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 involved_in ISO
IEA
(MGI:5514489|PMID:23897886)
GO_REF:0000107
RGD
Ensembl
PMID:23897886 GO_REF:0000107 MGI:5514489 NCBI chr10:81,081,985...81,118,009
Ensembl chr10:81,091,975...81,127,234
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      movement of cell or subcellular component 2226
        microtubule-based movement 430
          cilium movement 217
            regulation of cilium movement 47
              regulation of cilium beat frequency 18
                regulation of cilium beat frequency involved in ciliary motility + 9
Path 2
Term Annotations click to browse term
  biological_process 19497
    biological regulation 13606
      regulation of biological process 12866
        regulation of localization 3053
          regulation of cellular component movement 1146
            regulation of microtubule-based movement 65
              regulation of cilium movement 47
                regulation of cilium beat frequency 18
                  regulation of cilium beat frequency involved in ciliary motility + 9
paths to the root