Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:pericardium morphogenesis
go back to main search page
Accession:GO:0003344 term browser browse the term
Definition:The process in which the anatomical structure of the pericardium is generated and organized.

show annotations for term's descendants           Sort by:
 
pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273 		JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986 		JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA		 MGI:98958 (MGI:4413372|PMID:19795512)
PMID:21873635		 RGD PMID:19795512, PMID:21873635 MGI:4413372, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Notch1 notch receptor 1 ISO (MGI:3027664|PMID:14701881), (MGI:4837019|PMID:20890042), (MGI:5298073|PMID:21311046) RGD PMID:14701881 PMID:20890042 PMID:21311046 MGI:3027664 MGI:4837019 MGI:5298073 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO MGI:2155441 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:3,105,443...3,182,977
Ensembl chr 6:3,104,861...3,182,996 		JBrowse link
G Tbx20 T-box transcription factor 20 ISO (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570 		JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:1298218 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 ISO MGI:98958 (MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:4830282 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A IEA
ISO		 GO_REF:0000107
MGI:1857617 (MGI:4830282|PMID:19056682)		 Ensembl
RGD		 PMID:19056682 GO_REF:0000107 MGI:4830282 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
proepicardium cell migration involved in pericardium morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flrt3 fibronectin leucine rich transmembrane protein 3 ISS
ISO
IEA		 GO_REF:0000024
(MGI:3796818|PMID:18448090)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18448090 GO_REF:0000024 GO_REF:0000107 MGI:3796818 NCBI chr 3:134,684,446...134,696,586
Ensembl chr 3:134,683,065...134,696,654 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    developmental process 6824
      anatomical structure morphogenesis 2887
        embryonic morphogenesis 693
          pericardium morphogenesis 9
            planar cell polarity pathway involved in pericardium morphogenesis + 2
            proepicardium cell migration involved in pericardium morphogenesis 1
Path 2
Term Annotations click to browse term
  biological_process 20045
    developmental process 6824
      anatomical structure development 6290
        multicellular organism development 5766
          system development 5298
            animal organ development 4055
              heart development 688
                pericardium development 21
                  pericardium morphogenesis 9
                    planar cell polarity pathway involved in pericardium morphogenesis + 2
                    proepicardium cell migration involved in pericardium morphogenesis 1
paths to the root