ONTOLOGY REPORT - ANNOTATIONS
Term: cardiac atrium development
Accession: GO:0003230
browse the term
Definition: The process whose specific outcome is the progression of a cardiac atrium over time, from its formation to the mature structure. A cardiac atrium receives blood from a vein and pumps it to a cardiac ventricle.
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Igf1
insulin-like growth factor 1
IEP
RGD
PMID:15486038
RGD:12904917
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
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Igf1r
insulin-like growth factor 1 receptor
IEP
RGD
PMID:15486038
RGD:12904917
NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777
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Bmp10
bone morphogenetic protein 10
involved_in
IEA ISO
GO_REF:0000107 (MGI:1332872|PMID:10072785)
Ensembl RGD
PMID:10072785
GO_REF:0000107 MGI:1332872
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
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Eng
endoglin
involved_in
ISO
(MGI:3721185|PMID:17628518)
RGD
PMID:17628518
MGI:3721185
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
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Myh6
myosin heavy chain 6
involved_in
IEA ISO
GO_REF:0000107 (PMID:15735645)
Ensembl RGD
PMID:15735645
GO_REF:0000107
NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
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Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (MGI:3783944|PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107 MGI:3783944
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Pitx2
paired-like homeodomain 2
acts_upstream_of_or_within
ISO
MGI:2136268 (PMID:11493526)
RGD
PMID:11493526
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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Prox1
prospero homeobox 1
involved_in
ISO
(MGI:3830437|PMID:19091769)
RGD
PMID:19091769
MGI:3830437
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Tnnt2
troponin T2, cardiac type
acts_upstream_of_or_within
ISO
MGI:3692448|MGI:3692450|MGI:3692451 (PMID:10449439)
RGD
PMID:10449439
NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
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Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (PMID:20159597)
RGD
PMID:20159597
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
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Ank2
ankyrin 2
involved_in
ISO
(PMID:18832177)
RGD
PMID:18832177
NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
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Dand5
DAN domain BMP antagonist family member 5
involved_in
ISO
(MGI:3055649|PMID:15466485)
RGD
PMID:15466485
MGI:3055649
NCBI chr19:23,330,917...23,340,486
Ensembl chr19:23,334,164...23,339,589
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Gja5
gap junction protein, alpha 5
involved_in
ISO
(PMID:22199024)
RGD
PMID:22199024
NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
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Mdm2
MDM2 proto-oncogene
acts_upstream_of_or_within
ISO
MGI:107934 (PMID:22821713)
RGD
PMID:22821713
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
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Mdm4
MDM4 regulator of p53
acts_upstream_of_or_within
ISO
MGI:96952 (PMID:22821713)
RGD
PMID:22821713
NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
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Nphp3
nephrocystin 3
involved_in
ISO
(PMID:18371931)
RGD
PMID:18371931
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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Tbx5
T-box transcription factor 5
acts_upstream_of_or_within
ISO
MGI:2387851 (PMID:19084512)
RGD
PMID:19084512
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
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Wnt11
Wnt family member 11
involved_in
ISO
UniProtKB:P22725 (MGI:5424267|PMID:22569553)
RGD
PMID:22569553
MGI:5424267
NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
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Wnt5a
Wnt family member 5A
involved_in
ISO IEA
UniProtKB:P48615 (MGI:5424267|PMID:22569553) GO_REF:0000107
RGD Ensembl
PMID:22569553
GO_REF:0000107 MGI:5424267
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(MGI:3851675|PMID:19409885)
RGD
PMID:19409885
MGI:3851675
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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Ccn1
cellular communication network factor 1
acts_upstream_of_or_within
ISO
MGI:2446577 (PMID:17023674)
RGD
PMID:17023674
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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Cfc1
cripto, FRL-1, cryptic family 1
acts_upstream_of_or_within
ISO
MGI:2179530 (PMID:10521397)
RGD
PMID:10521397
NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930
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Gata4
GATA binding protein 4
involved_in
ISO
(PMID:12845333)
RGD
PMID:12845333
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO
MGI:2445238 (PMID:10969038)
RGD
PMID:10969038
NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(MGI:2386835|PMID:12372254)
RGD
PMID:12372254
MGI:2386835
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Isl1
ISL LIM homeobox 1
involved_in
ISO IEA
UniProtKB:Q02248 (MGI:3829137|PMID:17519333) GO_REF:0000107
RGD Ensembl
PMID:17519333
GO_REF:0000107 MGI:3829137
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
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Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:10587520), (PMID:9651244) GO_REF:0000107
RGD Ensembl
PMID:9651244 PMID:10587520
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
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Notch2
notch receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:16773578)
Ensembl RGD
PMID:16773578
GO_REF:0000107
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:102541 (PMID:22898775)
Ensembl RGD
PMID:22898775
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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Tbx20
T-box transcription factor 20
involved_in
ISO
(PMID:17668378), (PMID:18834961), (PMID:19762328)
RGD
PMID:17668378 PMID:18834961 PMID:19762328
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
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Tbx5
T-box transcription factor 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:108075 (PMID:22898775)
Ensembl RGD
PMID:22898775
GO_REF:0000107
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
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Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:894212|PMID:9217007)
RGD
PMID:9217007
MGI:894212
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Zfpm1
zinc finger protein, multitype 1
involved_in
ISO
(MGI:3583527|PMID:14614148)
RGD
PMID:14614148
MGI:3583527
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
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Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:19506109) GO_REF:0000107 (MGI:3610266|PMID:16140292)
RGD Ensembl
PMID:16140292 PMID:19506109
GO_REF:0000107 MGI:3610266
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
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Gata4
GATA binding protein 4
involved_in
ISO
(MGI:3769320|PMID:17643447)
RGD
PMID:17643447
MGI:3769320
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO
MGI:3851507 (PMID:19483677)
RGD
PMID:19483677
NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641
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Sox4
SRY-box transcription factor 4
involved_in
ISO
(MGI:3603061|PMID:16109771)
RGD
PMID:16109771
MGI:3603061
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
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Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3609313|PMID:11390347)
RGD
PMID:11390347
MGI:3609313
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Gata4
GATA binding protein 4
involved_in
ISO
(PMID:20347099)
RGD
PMID:20347099
NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO
MGI:3851507 (PMID:19483677)
RGD
PMID:19483677
NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641
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Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:3640731|PMID:16730346)
Ensembl RGD
PMID:16730346
GO_REF:0000107 MGI:3640731
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18297060)
RGD
PMID:18297060
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
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Ccm2l
CCM2 like scaffold protein
acts_upstream_of_or_within
ISO
MGI:1924696 (PMID:22898778)
RGD
PMID:22898778
NCBI chr 3:141,533,470...141,549,136
Ensembl chr 3:141,533,511...141,549,140
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Dll4
delta like canonical Notch ligand 4
involved_in
ISO IEA
(MGI:3056036|PMID:15466159) GO_REF:0000107
RGD Ensembl
PMID:15466159
GO_REF:0000107 MGI:3056036
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
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Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
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Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2385159|MGI:3838392 (PMID:19151727), (PMID:22898778)
RGD
PMID:19151727 PMID:22898778
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
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Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO
MGI:3794658 (PMID:17372176)
RGD
PMID:17372176
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
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Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:2155441 (PMID:9030684)
RGD
PMID:9030684
NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
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Notch1
notch receptor 1
involved_in
ISO
(MGI:4947514|PMID:20007915)
RGD
PMID:20007915
MGI:4947514
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Shox2
SHOX homeobox 2
involved_in
ISO IEA
(MGI:3836832|PMID:19166829) GO_REF:0000107
RGD Ensembl
PMID:19166829
GO_REF:0000107 MGI:3836832
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
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Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857617 (PMID:19056682)
Ensembl RGD
PMID:19056682
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
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Gja5
gap junction protein, alpha 5
acts_upstream_of_or_within
ISO
MGI:2445238 (PMID:10969038)
RGD
PMID:10969038
NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
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Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:10587520) GO_REF:0000107
RGD Ensembl
PMID:10587520
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
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