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ONTOLOGY REPORT - ANNOTATIONS

Term:atrial cardiac muscle tissue development
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Accession:GO:0003228 term browser browse the term
Definition:The process whose specific outcome is the progression of cardiac muscle of the atrium over time, from its formation to the mature structure.
Synonyms:exact_synonym: atrial myocardium development


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atrial cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:81,210,750...81,279,053
Ensembl chr 8:81,209,327...81,276,853 		JBrowse link
G NKX2-5 NK2 homeobox 5 involved_in ISO (MGI:3783941|PMID:17234970) BHF-UCL PMID:17234970 MGI:3783941 NCBI chr16:51,086,014...51,089,165
Ensembl chr16:51,086,011...51,089,162 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15254239) Ensembl
MGI		 PMID:15254239 GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:112,592,951...112,605,087
Ensembl chr  X:112,593,301...112,604,814 		JBrowse link
atrial cardiac muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP10 bone morphogenetic protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:73,519,904...73,530,448
Ensembl chr 3:73,519,934...73,529,950 		JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G LOC100736765 myosin-6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,677,666...75,704,486
Ensembl chr 7:75,676,791...75,704,644 		JBrowse link
G MYH7 myosin heavy chain 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,650,841...75,672,908
Ensembl chr 7:75,648,442...75,673,225 		JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:11493526) MGI PMID:11493526 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
G TNNT2 troponin T2, cardiac type acts_upstream_of_or_within ISO (PMID:10449439) MGI PMID:10449439 NCBI chr10:23,749,528...23,759,696
Ensembl chr10:23,749,335...23,763,396 		JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159597) Ensembl
MGI		 PMID:20159597 GO_REF:0000107 NCBI chr18:28,945,825...28,993,969
Ensembl chr18:28,946,326...28,993,961 		JBrowse link
sinoatrial node cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BVES blood vessel epicardial substance involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22354168) Ensembl
MGI		 PMID:22354168 GO_REF:0000107 NCBI chr 1:71,316,354...71,360,255
Ensembl chr 1:71,314,274...71,360,175 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,962,994...30,974,201
Ensembl chr16:30,963,000...30,973,907 		JBrowse link
G POPDC2 popeye domain containing 2 acts_upstream_of_or_within ISO (PMID:22354168) MGI PMID:22354168 NCBI chr13:140,601,522...140,621,928
Ensembl chr13:140,601,515...140,620,789 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G TBX18 T-box transcription factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19096026) Ensembl
MGI		 PMID:19096026 GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,766 		JBrowse link
sinoatrial node cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:55,322,016...55,327,600
Ensembl chr 7:55,322,274...55,323,539 		JBrowse link
sinoatrial node cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
sinoatrial node development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA6 GATA binding protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626 		JBrowse link
G SHOX2 SHOX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,889,785 		JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:19096026) MGI PMID:19096026 NCBI chr 1:53,836,939...53,867,460
Ensembl chr 1:53,838,189...53,867,254 		JBrowse link
G TBX5 T-box transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:37,772,205...37,826,015
Ensembl chr14:37,774,171...37,825,401 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17799
    developmental process 6719
      anatomical structure development 6314
        animal organ development 3525
          heart development 724
            cardiac muscle tissue development 284
              atrial cardiac muscle tissue development 22
                atrial cardiac muscle tissue morphogenesis 9
                sinoatrial node development + 9
Path 2
Term Annotations click to browse term
  biological_process 17799
    developmental process 6719
      anatomical structure development 6314
        multicellular organism development 5105
          system development 4453
            circulatory system development 1338
              heart development 724
                cardiac muscle tissue development 284
                  atrial cardiac muscle tissue development 22
                    atrial cardiac muscle tissue morphogenesis 9
                    sinoatrial node development + 9
paths to the root