Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:aortic valve morphogenesis
go back to main search page
Accession:GO:0003180 term browser browse the term
Definition:The process in which the structure of the aortic valve is generated and organized.


show annotations for term's descendants           Sort by:
aortic valve morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 involved_in ISO
IEA 		(PMID:31844321), (PMID:32323311)
GO_REF:0000107 		RGD
Ensembl		 PMID:31844321 PMID:32323311 GO_REF:0000107 NCBI chr18:52,346,448...52,531,245
Ensembl chr18:52,347,428...52,530,509 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO
IEA 		(PMID:23531444)
GO_REF:0000107 		RGD
Ensembl		 PMID:23531444 GO_REF:0000107 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:28069701), (PMID:31844321) 		Ensembl
RGD		 PMID:28069701 PMID:31844321 GO_REF:0000107 NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15070745), (PMID:18924235) 		Ensembl
RGD		 PMID:15070745 PMID:18924235 GO_REF:0000107 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO
IEA 		(PMID:26491108)
GO_REF:0000107 		RGD
Ensembl		 PMID:26491108 GO_REF:0000107 NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931 		JBrowse link
G Efna1 ephrin A1 involved_in ISO (PMID:20960543) RGD PMID:20960543 NCBI chr 2:176,979,434...176,988,675
Ensembl chr 2:174,681,682...174,690,866 		JBrowse link
G Eln elastin involved_in IEA
ISO 		GO_REF:0000107
(PMID:20576933) 		Ensembl
RGD		 PMID:20576933 GO_REF:0000107 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO
IEA 		(PMID:25056700)
GO_REF:0000107 		RGD
Ensembl		 PMID:25056700 GO_REF:0000107 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO
IEA 		(PMID:18955134)
GO_REF:0000107 		RGD
Ensembl		 PMID:18955134 GO_REF:0000107 NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391 		JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO
IEA 		(PMID:29325903)
GO_REF:0000107 		RGD
Ensembl		 PMID:29325903 GO_REF:0000107 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Gata5 GATA binding protein 5 involved_in ISO
IEA 		(PMID:22641149), (PMID:24638895)
GO_REF:0000107
(PMID:21633169) 		RGD
Ensembl		 PMID:21633169 PMID:22641149 PMID:24638895 GO_REF:0000107 NCBI chr 3:187,796,140...187,804,327
Ensembl chr 3:167,418,565...167,426,751 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO (PMID:22110751) RGD PMID:22110751 NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO
IEA 		(PMID:22110751)
GO_REF:0000107 		RGD
Ensembl		 PMID:22110751 GO_REF:0000107 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO MGI:2181762 (PMID:9515964) RGD PMID:9515964 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:Q01705 (PMID:10821808), (PMID:23583836), (PMID:27107132) 		Ensembl
RGD		 PMID:10821808 PMID:23583836 PMID:27107132 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO
IEA 		(PMID:16025100), (PMID:17662764), (PMID:18593716)
UniProtKB:P70313 (PMID:23583836), (PMID:26491108), (PMID:27107132)
GO_REF:0000107 		RGD
Ensembl		 PMID:16025100 PMID:17662764 PMID:18593716 PMID:23583836 PMID:26491108 More... GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:29304157) 		Ensembl
RGD		 PMID:29304157 GO_REF:0000107 NCBI chr15:54,780,858...54,911,989
Ensembl chr15:48,371,296...48,502,302 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:25691540) RGD PMID:25691540 NCBI chr11:24,067,869...25,108,694
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO UniProtKB:O89026 (PMID:25691540) RGD PMID:25691540 NCBI chr11:26,015,919...27,583,750
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO UniProtKB:M3TYT0 (PMID:26634652) RGD PMID:26634652 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO UniProtKB:I3LFH3 (PMID:26634652) RGD PMID:26634652 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO (PMID:25691540) RGD PMID:25691540 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Slit3 slit guidance ligand 3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:25691540) 		Ensembl
RGD		 PMID:25691540 GO_REF:0000107 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634 		JBrowse link
G Smad2 SMAD family member 2 involved_in ISO UniProtKB:Q9R001 (PMID:23531444) RGD PMID:23531444 NCBI chr18:72,124,792...72,193,345
Ensembl chr18:69,850,377...69,912,323 		JBrowse link
G Smad6 SMAD family member 6 involved_in ISO
IEA 		(PMID:22275001)
GO_REF:0000107 		RGD
Ensembl		 PMID:22275001 GO_REF:0000107 NCBI chr 8:73,345,457...73,414,985
Ensembl chr 8:64,450,114...64,519,763 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
IEA 		(PMID:22110751)
GO_REF:0000107 		RGD
Ensembl		 PMID:22110751 GO_REF:0000107 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO
IEA 		(PMID:18275040), (PMID:18834961)
GO_REF:0000107 		RGD
Ensembl		 PMID:18275040 PMID:18834961 GO_REF:0000107 NCBI chr 8:31,475,963...31,534,051
Ensembl chr 8:23,204,507...23,258,175 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
IEA 		(PMID:26634652)
GO_REF:0000107 		RGD
Ensembl		 PMID:26634652 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA 		(PMID:20101701)
GO_REF:0000107 		RGD
Ensembl		 PMID:20101701 GO_REF:0000107 NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 involved_in ISO
IEA 		(PMID:31319059)
GO_REF:0000107 		RGD
Ensembl		 PMID:31319059 GO_REF:0000107 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20804746) RGD PMID:20804746 NCBI chr 6:56,402,309...56,404,303
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
aortic valve formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh11 cadherin 11 involved_in ISO UniProtKB:P61586 (PMID:26188246) RGD PMID:26188246 NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,148,458...2,304,272 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA 		UniProtKB:F1RFU7 (PMID:26188246)
GO_REF:0000107 		RGD
Ensembl		 PMID:26188246 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure morphogenesis 3019
        heart valve morphogenesis 59
          aortic valve morphogenesis 33
            aortic valve formation 2
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            circulatory system development 1387
              heart development 750
                heart valve development 72
                  semi-lunar valve development 45
                    aortic valve development 39
                      aortic valve morphogenesis 33
                        aortic valve formation 2
paths to the root