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ONTOLOGY REPORT - ANNOTATIONS

Term:desmosome organization
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Accession:GO:0002934 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a desmosome. A desmosome is a patch-like intercellular junction found in vertebrate tissues, consisting of parallel zones of two cell membranes, separated by an space of 25-35 nm, and having dense fibrillar plaques in the subjacent cytoplasm.


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desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsg2 desmoglein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:20,691,247...20,737,583
Ensembl chr18:20,691,131...20,737,578 		JBrowse link
G Dsp desmoplakin involved_in
acts_upstream_of_or_within		 IMP (MGI:3723417|PMID:16917092)
(PMID:9864371)		 BHF-UCL
MGI		 PMID:9864371 PMID:16917092 MGI:3723417 NCBI chr13:38,335,357...38,382,553
Ensembl chr13:38,335,270...38,382,553 		JBrowse link
G Grhl1 grainyhead like transcription factor 1 acts_upstream_of_or_within IMP (PMID:24586629) MGI PMID:24586629 NCBI chr12:24,622,234...24,667,390
Ensembl chr12:24,622,282...24,667,390 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:18703497) MGI PMID:18703497 NCBI chr 9:43,655,251...43,718,758
Ensembl chr 9:43,655,281...43,743,955 		JBrowse link
G Perp PERP, TP53 apoptosis effector acts_upstream_of_or_within IMP (PMID:21285247) MGI PMID:21285247 NCBI chr10:18,720,819...18,732,821
Ensembl chr10:18,720,768...18,732,821 		JBrowse link
G Pkp2 plakophilin 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576 		JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:18496566), (PMID:8954745), (PMID:9847250) MGI PMID:8954745 PMID:9847250 PMID:18496566 GO_REF:0000119 MGI:4834177 NCBI chr11:100,259,682...100,288,639
Ensembl chr11:100,259,784...100,288,589 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:16,031,209...16,090,576
Ensembl chr16:16,031,182...16,090,576 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:140,658,202...140,670,424
Ensembl chr 7:140,658,131...140,670,423 		JBrowse link
G Prkca protein kinase C, alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754 		JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family zinc finger 2 involved_in IMP
ISO		 (MGI:892810|PMID:9182671) BHF-UCL
MGI		 PMID:9182671 GO_REF:0000119 MGI:4834177 MGI:892810 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    cellular process 17545
      cellular component organization or biogenesis 6954
        cellular component organization 6731
          cell junction organization 927
            cell-cell junction organization 243
              desmosome organization 10
                desmosome assembly 4
                desmosome disassembly 1
                desmosome maintenance 0
paths to the root