ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
Accession: GO:0002824
browse the term
Definition: Any process that activates or increases the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.
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Cd4
Cd4 molecule
involved_in
ISO
(MGI:1933768|PMID:1832488)
RGD
PMID:1832488
MGI:1933768
NCBI chr 4:157,668,878...157,695,366
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RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:30134159)
RGD
PMID:30134159
NCBI chr20:4,870,939...4,910,183
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RT1-S3
RT1 class Ib, locus S3
involved_in
ISO
(PMID:30134159)
RGD
PMID:30134159
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(MGI:6275756|PMID:30548312)
RGD
PMID:30548312
MGI:6275756
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:1857117|MGI:2683027 (MGI:3619310|PMID:14607964)
RGD
PMID:14607964
MGI:3619310
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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LOC100909593
class II histocompatibility antigen, M alpha chain-like
involved_in
ISO
(MGI:2153656|PMID:11714799)
RGD
PMID:11714799
MGI:2153656
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RT1-DMa
RT1 class II, locus DMa
involved_in
ISO
(MGI:2153656|PMID:11714799)
RGD
PMID:11714799
MGI:2153656
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
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Tnfrsf13c
TNF receptor superfamily member 13C
acts_upstream_of_or_within
ISO
MGI:2389403 (MGI:3036943|PMID:14557413)
RGD
PMID:14557413
MGI:3036943
NCBI chr 7:113,736,046...113,738,523
Ensembl chr 7:113,736,055...113,738,517
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Tnfsf13
TNF superfamily member 13
acts_upstream_of_or_within
ISO
MGI:3038886 (MGI:3037416|PMID:14988498)
RGD
PMID:14988498
MGI:3037416
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
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Tnfsf13b
TNF superfamily member 13b
acts_upstream_of_or_within
ISO
MGI:2387426 (MGI:3036943|PMID:14557413)
RGD
PMID:14557413
MGI:3036943
NCBI chr16:79,462,406...79,492,888
Ensembl chr16:79,462,402...79,492,693
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Fcer2
Fc epsilon receptor II
acts_upstream_of_or_within
ISO
MGI:3583003 (MGI:67606|PMID:8041705)
RGD
PMID:8041705
MGI:67606
NCBI chr12:1,742,809...1,754,476
Ensembl chr12:1,742,815...1,754,476
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Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:11934565
RGD:2303774
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
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Hpx
hemopexin
acts_upstream_of_or_within
ISO
MGI:2447193 (MGI:3807609|PMID:18641331)
RGD
PMID:18641331
MGI:3807609
NCBI chr 1:159,932,819...159,940,327
Ensembl chr 1:159,932,755...159,940,328
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Lta
lymphotoxin alpha
acts_upstream_of_or_within
ISO
MGI:104798 (MGI:3690573|PMID:9834074)
RGD
PMID:9834074
MGI:3690573
NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
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Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
ISO
MGI:3529594 (MGI:3528786|PMID:15692051)
RGD
PMID:15692051
MGI:3528786
NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (MGI:77753|PMID:8566034)
RGD
PMID:8566034
MGI:77753
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
MGI:104797 (MGI:3690573|PMID:9834074)
RGD
PMID:9834074
MGI:3690573
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Cd226
CD226 molecule
involved_in
ISO IBA
(PMID:16831868) PMID:21873635
RGD
PMID:16831868 PMID:21873635
RGD:13792537
NCBI chr18:82,449,924...82,545,107
Ensembl chr18:82,450,568...82,543,051
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Nectin2
nectin cell adhesion molecule 2
involved_in
ISO IBA
(PMID:16831868) PMID:21873635
RGD
PMID:16831868 PMID:21873635
RGD:13792537
NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:3763508|PMID:12496423)
RGD
PMID:12496423
MGI:3763508
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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LOC688282
hypothetical protein LOC688282
involved_in
ISO
(MGI:6103709|PMID:28978694)
RGD
PMID:28978694
MGI:6103709
NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
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Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5009207|PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107 MGI:5009207
NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:3763508|PMID:12496423)
RGD
PMID:12496423
MGI:3763508
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Exosc3
exosome component 3
acts_upstream_of_or_within
ISO
(MGI:5009766|PMID:21255825)
RGD
PMID:21255825
MGI:5009766
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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Exosc6
exosome component 6
acts_upstream_of_or_within
ISO
(MGI:5009766|PMID:21255825)
RGD
PMID:21255825
MGI:5009766
NCBI chr19:39,021,308...39,023,535
Ensembl chr19:39,022,183...39,023,515
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Hmces
5-hydroxymethylcytosine binding, ES cell specific
involved_in
ISS ISO
GO_REF:0000024 (MGI:6393148|PMID:31806351)
UniProt RGD
PMID:31806351
GO_REF:0000024 MGI:6393148
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
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Kmt5b
lysine methyltransferase 5B
involved_in
ISS ISO
GO_REF:0000024 (MGI:6370097|PMID:28114273)
UniProt RGD
PMID:28114273
GO_REF:0000024 MGI:6370097
NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
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Kmt5c
lysine methyltransferase 5C
involved_in
ISO ISS
(MGI:6370097|PMID:28114273) GO_REF:0000024
RGD UniProt
PMID:28114273
GO_REF:0000024 MGI:6370097
NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
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Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
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Paxip1
PAX interacting protein 1
involved_in
ISO
(MGI:4821506|PMID:20671152)
RGD
PMID:20671152
MGI:4821506
NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
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Rif1
replication timing regulatory factor 1
involved_in
ISO
(MGI:5468036|PMID:23306439), (MGI:5476381|PMID:23333305), (MGI:5490831|PMID:23333306)
RGD
PMID:23306439 PMID:23333305 PMID:23333306
MGI:5468036 MGI:5476381 MGI:5490831
NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
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Shld1
shieldin complex subunit 1
involved_in
ISO IBA
(PMID:29656893) PMID:21873635
RGD
PMID:29656893 PMID:21873635
RGD:13792537
NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550
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Shld2
shieldin complex subunit 2
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965
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Shld3
shieldin complex subunit 3
involved_in
ISO
(PMID:29656893)
RGD
PMID:29656893
NCBI chr 2:35,294,956...35,301,865
Ensembl chr 2:35,295,859...35,302,346
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Tfrc
transferrin receptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:26642240)
UniProt RGD
PMID:26642240
GO_REF:0000024
NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257
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Tp53bp1
tumor protein p53 binding protein 1
involved_in
ISO
(PMID:23345425), (PMID:23760478) (MGI:3041657|PMID:15077110), (MGI:3046005|PMID:15159415)
RGD
PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478
MGI:3041657 MGI:3046005
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:1342394|PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107 MGI:1342394
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:1342394|PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107 MGI:1342394
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Nsd2
nuclear receptor binding SET domain protein 2
acts_upstream_of_or_within
ISO
(MGI:5462481|PMID:23241889)
RGD
PMID:23241889
MGI:5462481
NCBI chr14:76,833,194...76,911,304
Ensembl chr14:76,835,637...76,913,641
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (MGI:1342394|PMID:10430621)
RGD
PMID:10430621
MGI:1342394
NCBI chr12:10,676,819...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:14988498)
AgBase RGD
PMID:14988498
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Tnfsf13
TNF superfamily member 13
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (PMID:14988498) MGI:3038886 (MGI:3037416|PMID:14988498)
RGD
PMID:14988498 PMID:21873635
MGI:3037416 , RGD:13792537
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
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Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(MGI:3777853|PMID:12023368)
RGD
PMID:12023368
MGI:3777853
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
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Il4
interleukin 4
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:3037416|PMID:14988498)
RGD
PMID:14988498 PMID:21873635
MGI:3037416 , RGD:13792537
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Stat6
signal transducer and activator of transcription 6
acts_upstream_of_or_within
ISO
MGI:107187 (MGI:1345885|PMID:10490661)
RGD
PMID:10490661
MGI:1345885
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
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Atad5
ATPase family, AAA domain containing 5
acts_upstream_of_or_within
ISO
MGI:4127920 (MGI:5763555|PMID:25404367)
RGD
PMID:25404367
MGI:5763555
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
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Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:1857150 (MGI:62368|PMID:7688139)
RGD
PMID:7688139
MGI:62368
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
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Cd40
CD40 molecule
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:2670820|PMID:12882831)
RGD
PMID:12882831 PMID:21873635
MGI:2670820 , RGD:13792537
NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
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Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(MGI:2670820|PMID:12882831)
RGD
PMID:12882831
MGI:2670820
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Il2
interleukin 2
acts_upstream_of_or_within
ISO
MGI:1857191 (MGI:87443|PMID:1830926)
RGD
PMID:1830926
MGI:87443
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Il4
interleukin 4
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:2670820|PMID:12882831), (MGI:3037416|PMID:14988498)
RGD
PMID:12882831 PMID:14988498 PMID:21873635
MGI:2670820 MGI:3037416 , RGD:13792537
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Mlh1
mutL homolog 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:1342394|PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107 MGI:1342394
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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Msh2
mutS homolog 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:1342394|PMID:10430621)
Ensembl RGD
PMID:10430621
GO_REF:0000107 MGI:1342394
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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Pagr1
Paxip1-associated glutamate-rich protein 1
involved_in
ISO
(MGI:5752090|PMID:26744420)
RGD
PMID:26744420
MGI:5752090
NCBI chr 1:181,622,708...181,624,996
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Paxip1
PAX interacting protein 1
involved_in
ISO
(MGI:5752090|PMID:26744420)
RGD
PMID:26744420
MGI:5752090
NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
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Pms2
PMS1 homolog 2, mismatch repair system component
involved_in
ISO
UniProtKB:Q9JK91 (MGI:1342394|PMID:10430621)
RGD
PMID:10430621
MGI:1342394
NCBI chr12:10,676,819...10,701,161
Ensembl chr12:10,676,764...10,701,066
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (MGI:85031|PMID:9015183)
RGD
PMID:9015183
MGI:85031
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Tbx21
T-box transcription factor 21
acts_upstream_of_or_within
ISO
MGI:2180194 (MGI:2670820|PMID:12882831)
RGD
PMID:12882831
MGI:2670820
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:2654936 (MGI:3662775|PMID:16532000)
RGD
PMID:16532000
MGI:3662775
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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B2m
beta-2 microglobulin
involved_in
ISO
(PMID:24643698)
RGD
PMID:24643698
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Cd55
CD55 molecule (Cromer blood group)
involved_in
ISO
(PMID:16818763)
RGD
PMID:16818763
NCBI chr13:41,857,242...41,885,966
Ensembl chr13:41,857,395...41,885,831
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Fzd5
frizzled class receptor 5
involved_in
ISO IEA
(PMID:16601243) GO_REF:0000107
RGD Ensembl
PMID:16601243
GO_REF:0000107
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
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Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
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Map3k7
mitogen activated protein kinase kinase kinase 7
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
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Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (MGI:3607020|PMID:16227612)
RGD
PMID:16227612
MGI:3607020
NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4942267|PMID:9670042), (MGI:4943387|PMID:18354165)
RGD
PMID:9670042 PMID:18354165
MGI:4942267 MGI:4943387
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Traf2
Tnf receptor-associated factor 2
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
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Traf6
TNF receptor associated factor 6
involved_in
ISO
(PMID:15125833)
RGD
PMID:15125833
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(MGI:85636|PMID:9029087)
RGD
PMID:9029087
MGI:85636
NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
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B2m
beta-2 microglobulin
acts_upstream_of_or_within
ISO
(MGI:3611636|PMID:16299293)
RGD
PMID:16299293
MGI:3611636
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
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Cd1d1
CD1d1 molecule
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:2180705|PMID:10201995) PMID:21873635
RGD
PMID:10201995 PMID:21873635
MGI:2180705 , RGD:13792537
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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Cyrib
CYFIP related Rac1 interactor B
involved_in
ISO
(MGI:5432330|PMID:22522492)
RGD
PMID:22522492
MGI:5432330
NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686
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Fadd
Fas associated via death domain
involved_in
ISS ISO
GO_REF:0000024 (MGI:5291865|PMID:21876153)
UniProt RGD
PMID:21876153
GO_REF:0000024 MGI:5291865
NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
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Hspa1a
heat shock protein family A (Hsp70) member 1A
IDA
prevention of heat shock-induced resistance to CTL-mediated killing
RGD
PMID:10679071
RGD:1298959
NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
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Hspa8
heat shock protein family A (Hsp70) member 8
IMP
RGD
PMID:8871636
RGD:10059395
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Il12a
interleukin 12A
involved_in
ISO
(PMID:1674604), (PMID:2204066)
RGD
PMID:1674604 PMID:2204066
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
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Il12b
interleukin 12B
involved_in
ISO
(MGI:3027369|PMID:14688363)
RGD
PMID:14688363
MGI:3027369
NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
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Il23a
interleukin 23 subunit alpha
involved_in
ISO
(MGI:3027369|PMID:14688363)
RGD
PMID:14688363
MGI:3027369
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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LOC100909797
RT1 class I histocompatibility antigen, AA alpha chain-like
acts_upstream_of_or_within
ISO
MGI:3701255 (MGI:3611636|PMID:16299293), (MGI:3700863|PMID:16461341), (MGI:3700871|PMID:16476767), (MGI:52901|PMID:8464890)
RGD
PMID:8464890 PMID:16299293 PMID:16461341 PMID:16476767
MGI:3611636 MGI:3700863 MGI:3700871 MGI:52901
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P2rx7
purinergic receptor P2X 7
acts_upstream_of_or_within
ISO
MGI:3042190 (MGI:3040567|PMID:14761980)
RGD
PMID:14761980
MGI:3040567
NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
(MGI:55923|PMID:6233370)
RGD
PMID:6233370
MGI:55923
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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RT1-A1
RT1 class Ia, locus A1
involved_in
IDA ISO
(PMID:2420472)
RGD
PMID:2420472 PMID:11773898
RGD:2313503
NCBI chr20:4,905,309...4,914,593
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RT1-A2
RT1 class Ia, locus A2
acts_upstream_of_or_within involved_in
ISO
(MGI:50291|PMID:1538753) (PMID:25631937)
RGD
PMID:1538753 PMID:25631937
MGI:50291
NCBI chr20:4,870,939...4,910,183
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RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:23851683)
RGD
PMID:23851683
NCBI chr20:3,403,418...3,479,476
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RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:29884618)
RGD
PMID:29884618
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
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RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:29884618)
RGD
PMID:29884618
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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RT1-M3-1
RT1 class Ib, locus M3, gene 1
acts_upstream_of_or_within
ISO
MGI:3701255 (MGI:3611636|PMID:16299293), (MGI:3700863|PMID:16461341), (MGI:3700871|PMID:16476767), (MGI:52901|PMID:8464890)
RGD
PMID:8464890 PMID:16299293 PMID:16461341 PMID:16476767
MGI:3611636 MGI:3700863 MGI:3700871 MGI:52901
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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RT1-S3
RT1 class Ib, locus S3
involved_in acts_upstream_of_or_within
ISO
(PMID:25631937) (MGI:50291|PMID:1538753)
RGD
PMID:1538753 PMID:25631937
MGI:50291
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
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Stx7
syntaxin 7
involved_in
ISO IEA
(PMID:21438968) GO_REF:0000107
RGD Ensembl
PMID:21438968
GO_REF:0000107
NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
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Tap2
transporter 2, ATP binding cassette subfamily B member
acts_upstream_of_or_within involved_in
ISO IEA IDA
(MGI:3611636|PMID:16299293), (MGI:50291|PMID:1538753) GO_REF:0000107 PMID:1758495
RGD Ensembl
PMID:1538753 PMID:16299293 PMID:1758495
GO_REF:0000107 MGI:3611636 MGI:50291 , RGD:1299069
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
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Xcl1
X-C motif chemokine ligand 1
involved_in
ISO
(PMID:18832695)
RGD
PMID:18832695
NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
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Mr1
major histocompatibility complex, class I-related
involved_in
ISO IEA
(PMID:31959982) GO_REF:0000107
RGD Ensembl
PMID:31959982
GO_REF:0000107
NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
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Slc22a13l1
solute carrier family 22 member 13-like 1
involved_in
ISO
(PMID:19282870)
RGD
PMID:19282870
NCBI chr 8:118,958,209...118,972,614
Ensembl chr 8:118,961,000...118,966,046
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Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
(MGI:73458|PMID:7774619)
RGD
PMID:7774619
MGI:73458
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
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Fbxo38
F-box protein 38
involved_in
ISO
(PMID:30487606)
RGD
PMID:30487606
NCBI chr18:55,956,950...56,004,013
Ensembl chr18:55,956,959...56,003,961
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Hspd1
heat shock protein family D (Hsp60) member 1
involved_in
ISO
(PMID:10663613)
RGD
PMID:10663613
NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
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RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:30282837)
RGD
PMID:30282837
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
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Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (MGI:55923|PMID:6233370), (MGI:77753|PMID:8566034)
RGD
PMID:6233370 PMID:8566034
MGI:55923 MGI:77753
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(MGI:5446979|PMID:22753936)
RGD
PMID:22753936
MGI:5446979
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
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Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(MGI:5887181|PMID:27671645)
RGD
PMID:27671645
MGI:5887181
NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
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Il18
interleukin 18
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:10653850) GO_REF:0000024
Ensembl RGD UniProt
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
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Il18r1
interleukin 18 receptor 1
involved_in
ISO
(PMID:10653850)
RGD
PMID:10653850
NCBI chr 9:42,727,416...42,760,971
Ensembl chr 9:42,727,869...42,760,715
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Il1b
interleukin 1 beta
involved_in
ISO ISS
(PMID:10653850) GO_REF:0000024
RGD UniProt
PMID:10653850
GO_REF:0000024
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il1r1
interleukin 1 receptor type 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:10653850) GO_REF:0000024
Ensembl RGD UniProt
PMID:10653850
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:42,504,917...42,580,958
Ensembl chr 9:42,504,735...42,579,937
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Slamf1
signaling lymphocytic activation molecule family member 1
involved_in
ISO
(MGI:5700493|PMID:9126961)
RGD
PMID:9126961
MGI:5700493
NCBI chr13:84,270,316...84,305,497
Ensembl chr13:84,270,316...84,305,497
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Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:1354779|PMID:10761931)
RGD
PMID:10761931
MGI:1354779
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5009207|PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107 MGI:5009207
NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
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Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3759174|PMID:10657654)
BHF-UCL RGD
PMID:10657654
GO_REF:0000024 MGI:3759174
NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
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Il12b
interleukin 12B
involved_in
ISO
(PMID:15114670) (MGI:3027369|PMID:14688363)
RGD
PMID:14688363 PMID:15114670
MGI:3027369
NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
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Il12rb1
interleukin 12 receptor subunit beta 1
involved_in
ISO
(PMID:15114670)
RGD
PMID:15114670
NCBI chr16:18,620,228...18,633,207
Ensembl chr16:18,620,770...18,632,769
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Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:15114670) (MGI:3027369|PMID:14688363)
RGD
PMID:14688363 PMID:15114670
MGI:3027369
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Il23r
interleukin 23 receptor
involved_in
ISO
(PMID:15114670)
RGD
PMID:15114670
NCBI chr 4:96,580,568...96,672,540
Ensembl chr 4:96,580,714...96,674,021
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Il27ra
interleukin 27 receptor subunit alpha
acts_upstream_of_or_within
ISO
MGI:3525439 (MGI:1926579|PMID:11057672)
RGD
PMID:11057672
MGI:1926579
NCBI chr19:24,109,698...24,121,977
Ensembl chr19:24,109,972...24,121,938
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Nlrp10
NLR family, pyrin domain containing 10
involved_in
ISO
(MGI:5449483|PMID:23071280)
RGD
PMID:23071280
MGI:5449483
NCBI chr 1:162,922,806...162,930,363
Ensembl chr 1:162,922,806...162,930,363
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Pla2g4a
phospholipase A2 group IVA
involved_in
ISO
(MGI:3621220|PMID:16172261)
RGD
PMID:16172261
MGI:3621220
NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2446070 (MGI:2176424|PMID:11894097)
RGD
PMID:11894097
MGI:2176424
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
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RT1-Bb
RT1 class II, locus Bb
involved_in
ISO
(MGI:4942246|PMID:14607905)
RGD
PMID:14607905
MGI:4942246
NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
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Slc11a1
solute carrier family 11 member 1
acts_upstream_of_or_within
ISO
(MGI:3839054|PMID:18984740)
RGD
PMID:18984740
MGI:3839054
NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
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Malt1
MALT1 paracaspase
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
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Mir326
microRNA 326
acts_upstream_of_or_within
ISO
(MGI:4436838|PMID:19838199)
RGD
PMID:19838199
MGI:4436838
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
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Nfkbid
NFKB inhibitor delta
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
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Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr11:44,782,676...44,810,723
Ensembl chr11:44,782,676...44,810,723
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Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
RGD
PMID:26098997
MGI:5689221
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
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Il23a
interleukin 23 subunit alpha
involved_in
IBA ISO
PMID:21873635 (MGI:3851279|PMID:19501566)
RGD
PMID:19501566 PMID:21873635
MGI:3851279 , RGD:13792537
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(MGI:5780752|PMID:27022145)
RGD
PMID:27022145
MGI:5780752
NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
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Card9
caspase recruitment domain family, member 9
involved_in
ISO
(PMID:24231284), (PMID:29080677) (MGI:5567862|PMID:24470469), (MGI:6445005|PMID:32358020)
RGD
PMID:24231284 PMID:24470469 PMID:29080677 PMID:32358020
MGI:5567862 MGI:6445005
NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
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Clec4a
C-type lectin domain family 4, member A
involved_in
ISO
(MGI:6445005|PMID:32358020)
RGD
PMID:32358020
MGI:6445005
NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
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Clec6a-ps1
C-type lectin domain family 6, member A, pseudogene 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 4:156,539,408...156,559,032
Ensembl chr 4:156,539,408...156,558,605
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Il12b
interleukin 12B
involved_in
ISO
(PMID:16482511)
RGD
PMID:16482511
NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
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Il23a
interleukin 23 subunit alpha
involved_in
ISO
(MGI:3851279|PMID:19501566) (PMID:16482511)
RGD
PMID:16482511 PMID:19501566
MGI:3851279
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
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Mir301a
microRNA 301a
acts_upstream_of_or_within
ISO
(MGI:5426073|PMID:22517757)
RGD
PMID:22517757
MGI:5426073
NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
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Nlrp10
NLR family, pyrin domain containing 10
involved_in
ISO
(MGI:5449483|PMID:23071280)
RGD
PMID:23071280
MGI:5449483
NCBI chr 1:162,922,806...162,930,363
Ensembl chr 1:162,922,806...162,930,363
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Prkcq
protein kinase C, theta
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3769226|PMID:16493044) GO_REF:0000024
Ensembl RGD UniProt
PMID:16493044
GO_REF:0000024 GO_REF:0000107 MGI:3769226
NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
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Cd81
Cd81 molecule
involved_in
ISS ISO
GO_REF:0000024 (PMID:8766544) (MGI:1926561|PMID:11046035)
UniProt RGD
PMID:8766544 PMID:11046035
GO_REF:0000024 MGI:1926561
NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
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Dennd1b
DENN domain containing 1B
involved_in
ISO
(PMID:26774822) (MGI:5751612|PMID:26774822)
RGD
PMID:26774822
MGI:5751612
NCBI chr13:50,545,324...50,772,922
Ensembl chr13:50,545,836...50,770,601
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Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
(MGI:3046385|PMID:15087456)
RGD
PMID:15087456
MGI:3046385
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
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Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Il6
interleukin 6
involved_in
ISO
(MGI:5795829|PMID:11159963)
RGD
PMID:11159963
MGI:5795829
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
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Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
RGD
PMID:26098997
MGI:5689221
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
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Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (MGI:3584076|PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024 MGI:3584076
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
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Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3844206|PMID:19047684) GO_REF:0000107
UniProt RGD Ensembl
PMID:19047684
GO_REF:0000024 GO_REF:0000107 MGI:3844206
NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699
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Xcl1
X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5009207|PMID:9973465)
Ensembl RGD
PMID:9973465
GO_REF:0000107 MGI:5009207
NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
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RT1-A1
RT1 class Ia, locus A1
IMP
RGD
PMID:16000395
RGD:2313504
NCBI chr20:4,905,309...4,914,593
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Cd274
CD274 molecule
involved_in
ISO
(PMID:28813410), (PMID:28813417)
RGD
PMID:28813410 PMID:28813417
NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450
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Btk
Bruton tyrosine kinase
IMP
RGD
PMID:22228807
RGD:11040701
NCBI chr X:97,722,796...97,762,315
Ensembl chr X:97,722,802...97,761,853
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Fcer1a
Fc epsilon receptor Ia
acts_upstream_of_or_within
ISO
MGI:2383982 (MGI:86632|PMID:8252632)
RGD
PMID:8252632
MGI:86632
NCBI chr13:85,686,099...85,692,394
Ensembl chr13:85,686,092...85,692,351
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Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:2384004 (MGI:3029067|PMID:14764707)
RGD
PMID:14764707
MGI:3029067
NCBI chr13:83,649,447...83,654,215
Ensembl chr13:83,649,449...83,671,443
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Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (MGI:2683749|PMID:9743367), (MGI:78617|PMID:8552190), (MGI:82508|PMID:8769481)
RGD
PMID:8552190 PMID:8769481 PMID:9743367
MGI:2683749 MGI:78617 MGI:82508
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
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Ighg1
immunoglobulin heavy constant gamma 1
acts_upstream_of_or_within
ISO
(MGI:2683749|PMID:9743367), (MGI:2683928|PMID:6952213), (MGI:78617|PMID:8552190)
RGD
PMID:6952213 PMID:8552190 PMID:9743367
MGI:2683749 MGI:2683928 MGI:78617
Ensembl chr 6:132,389,370...132,393,397
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C3
complement C3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861799 (MGI:2177393|PMID:11901193)
Ensembl RGD
PMID:11901193
GO_REF:0000107 MGI:2177393
NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429
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Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:1857165|MGI:2384004 (MGI:2177393|PMID:11901193), (MGI:2383973|PMID:8976192), (MGI:2664488|PMID:11911824)
RGD
PMID:8976192 PMID:11901193 PMID:11911824
MGI:2177393 MGI:2383973 MGI:2664488
NCBI chr13:83,649,447...83,654,215
Ensembl chr13:83,649,449...83,671,443
G
Fcgr1a
Fc gamma receptor 1A
acts_upstream_of_or_within
ISO
MGI:2664927 (MGI:2664488|PMID:11911824)
RGD
PMID:11911824
MGI:2664488
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (MGI:2664488|PMID:11911824), (MGI:2683747|PMID:9834201)
RGD
PMID:9834201 PMID:11911824
MGI:2664488 MGI:2683747
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
G
Ighg1
immunoglobulin heavy constant gamma 1
acts_upstream_of_or_within
ISO
(MGI:2177393|PMID:11901193), (MGI:2683747|PMID:9834201)
RGD
PMID:9834201 PMID:11901193
MGI:2177393 MGI:2683747
Ensembl chr 6:132,389,370...132,393,397
G
Btk
Bruton tyrosine kinase
IMP
RGD
PMID:22228807
RGD:11040701
NCBI chr X:97,722,796...97,762,315
Ensembl chr X:97,722,802...97,761,853
G
Fcer1g
Fc epsilon receptor Ig
acts_upstream_of_or_within
ISO
MGI:1857165 (MGI:2383973|PMID:8976192)
RGD
PMID:8976192
MGI:2383973
NCBI chr13:83,649,447...83,654,215
Ensembl chr13:83,649,449...83,671,443
G
Fcgr1a
Fc gamma receptor 1A
acts_upstream_of_or_within
ISO
MGI:2679238 (MGI:2679189|PMID:11911823)
RGD
PMID:11911823
MGI:2679189
NCBI chr 2:183,851,075...183,860,077
Ensembl chr 2:183,851,077...183,859,994
G
Fcgr2a
Fc gamma receptor 2A
acts_upstream_of_or_within
ISO
MGI:1861924 (MGI:82508|PMID:8769481)
RGD
PMID:8769481
MGI:82508
NCBI chr13:83,280,782...83,297,535
Ensembl chr13:83,280,784...83,295,967
G
Zp3
zona pellucida glycoprotein 3
involved_in
ISO ISS IEA
(PMID:15579591) (MGI:4943411|PMID:15579591) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:15579591
GO_REF:0000024 GO_REF:0000107 MGI:4943411
NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
G
Nectin2
nectin cell adhesion molecule 2
involved_in
IBA ISO
PMID:21873635 (PMID:15039383)
RGD
PMID:15039383 PMID:21873635
RGD:13792537
NCBI chr 1:79,372,123...79,407,379
Ensembl chr 1:79,372,119...79,407,360
G
Pvr
PVR cell adhesion molecule
involved_in
ISO
(PMID:15039383)
RGD
PMID:15039383
NCBI chr 1:79,561,294...79,576,700
Ensembl chr 1:79,546,879...79,576,715
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all