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Pathways
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ONTOLOGY REPORT - ANNOTATIONS

Term:immune response-activating signaling pathway
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Accession:GO:0002757 term browser browse the term
Definition:The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an immune response.
Synonyms:exact_synonym: immune response-activating signal transduction

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immune response-activating signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528 		JBrowse link
antigen receptor-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar1 BCAR1 scaffold protein, Cas family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,994,130...24,032,829
Ensembl chrNW_004936475:23,992,193...24,033,031 		JBrowse link
G Cd19 CD19 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,793,903...11,807,410
Ensembl chrNW_004936501:11,793,891...11,804,162 		JBrowse link
G Lax1 lymphocyte transmembrane adaptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843560) TreeGrafter
MGI
Ensembl		 PMID:15843560 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936567:924,526...930,267
Ensembl chrNW_004936567:925,583...934,270 		JBrowse link
G Sh2b2 SH2B adaptor protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:1,799,610...1,820,889
Ensembl chrNW_004936543:1,799,568...1,822,028 		JBrowse link
B cell receptor apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
B cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11120811), (PMID:19228876) Ensembl
MGI		 PMID:11120811 PMID:19228876 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Bcar1 BCAR1 scaffold protein, Cas family member involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,994,130...24,032,829
Ensembl chrNW_004936475:23,992,193...24,033,031 		JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921 		JBrowse link
G Blk BLK proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:3,228,982...3,246,617
Ensembl chrNW_004936675:3,229,154...3,246,292 		JBrowse link
G Blnk B cell linker involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:3,220,554...3,290,054
Ensembl chrNW_004936636:3,220,554...3,289,588 		JBrowse link
G Bmx BMX non-receptor tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:4,914,643...4,962,134
Ensembl chrNW_004936470:4,914,756...4,962,129 		JBrowse link
G Btk Bruton tyrosine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G Cd19 CD19 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9254656) Ensembl
MGI
TreeGrafter		 PMID:9254656 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:11,793,903...11,807,410
Ensembl chrNW_004936501:11,793,891...11,804,162 		JBrowse link
G Cd38 CD38 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:12,109,761...12,156,037
Ensembl chrNW_004936477:12,108,742...12,156,248 		JBrowse link
G Cd79a CD79a molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1373499), (PMID:8626447) Ensembl
MGI
TreeGrafter
InterPro		 PMID:1373499 PMID:8626447 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936706:561,195...564,577
Ensembl chrNW_004936706:561,140...564,661 		JBrowse link
G Cd79b CD79b molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1373499), (PMID:8626447) InterPro
MGI
TreeGrafter		 PMID:1373499 PMID:8626447 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936541:4,534,233...4,537,448
Ensembl chrNW_004936541:4,534,246...4,537,590 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936631:484,356...489,643
Ensembl chrNW_004936631:484,356...489,643 		JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369 		JBrowse link
G Itk IL2 inducible T cell kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936515:5,891,873...5,952,400
Ensembl chrNW_004936515:5,891,828...5,952,458 		JBrowse link
G Klhl6 kelch like family member 6 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936578:6,226,533...6,284,343
Ensembl chrNW_004936578:6,226,495...6,284,293 		JBrowse link
G Lat2 linker for activation of T cells family member 2 involved_in ISO (PMID:12514734) HGNC-UCL PMID:12514734 NCBI chrNW_004936543:3,250,956...3,262,668 JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7499277) TreeGrafter
MGI		 PMID:7499277 GO_REF:0000118 NCBI chrNW_004936474:15,293,115...15,314,072
Ensembl chrNW_004936474:15,305,050...15,313,668 		JBrowse link
G Lime1 Lck interacting transmembrane adaptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249387) InterPro
MGI
TreeGrafter
Ensembl		 PMID:16249387 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936514:10,980,136...10,983,323 JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:3,453,475...3,579,292
Ensembl chrNW_004936514:3,467,178...3,578,882 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23509253)
(PMID:7499277)		 Ensembl
MGI		 PMID:7499277 PMID:23509253 GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9254656) Ensembl
MGI		 PMID:9254656 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G MNDA myeloid cell nuclear differentiation antigen involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936740:1,539,648...1,554,608 JBrowse link
G Ms4a1 membrane spanning 4-domains A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:2,466,294...2,477,530
Ensembl chrNW_004936581:2,466,312...2,477,530 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:11,683,330...11,734,423
Ensembl chrNW_004936512:11,683,321...11,734,391 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 acts_upstream_of_or_within ISO (PMID:15143214) MGI PMID:15143214 NCBI chrNW_004936718:367,996...399,030 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Plekha1 pleckstrin homology domain containing A1 involved_in ISO (PMID:12101241) UniProt PMID:12101241 NCBI chrNW_004936486:11,203,873...11,241,028 JBrowse link
G Prkcb protein kinase C beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,410,273...8,729,238
Ensembl chrNW_004936501:8,437,715...8,728,716 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23509253)
(PMID:9254656)		 Ensembl
MGI		 PMID:9254656 PMID:23509253 GO_REF:0000107 NCBI chrNW_004936709:864,206...884,630
Ensembl chrNW_004936709:864,197...884,610 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7499277)
(PMID:9254656)		 Ensembl
MGI		 PMID:7499277 PMID:9254656 GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Rftn1 raftlin, lipid raft linker 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:9,119,234...9,317,696
Ensembl chrNW_004936473:9,117,247...9,317,704 		JBrowse link
G Sh2b2 SH2B adaptor protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10872802) Ensembl
MGI		 PMID:10872802 GO_REF:0000107 NCBI chrNW_004936543:1,799,610...1,820,889
Ensembl chrNW_004936543:1,799,568...1,822,028 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:12,162,553...12,281,812
Ensembl chrNW_004936508:12,162,547...12,281,820 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7499277), (PMID:8626447) Ensembl
MGI
TreeGrafter		 PMID:7499277 PMID:8626447 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tec tec protein tyrosine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:14,248,277...14,341,329
Ensembl chrNW_004936482:14,248,233...14,341,402 		JBrowse link
G Txk TXK tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:14,190,409...14,231,690
Ensembl chrNW_004936482:14,190,409...14,245,943 		JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936731:417,610...767,427
Ensembl chrNW_004936731:417,322...767,429 		JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G LOC101965964 ficolin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,421,092...2,428,240
Ensembl chrNW_004936669:2,421,087...2,431,714 		JBrowse link
G LOC101971238 free fatty acid receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:895,364...896,356
Ensembl chrNW_004936570:895,364...896,356 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35322803), (PMID:35438208), (PMID:35460603) UniProt PMID:32911482 PMID:32912999 PMID:33542149 PMID:35322803 PMID:35438208 More... NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:8,555,966...8,562,829
Ensembl chrNW_004936531:8,555,637...8,562,885 		JBrowse link
complement component C5a signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3ar1 complement C3a receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296 		JBrowse link
G C5ar1 complement C5a receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374 		JBrowse link
G C5ar2 complement C5a receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936664:1,047,997...1,050,612
Ensembl chrNW_004936664:1,047,997...1,049,016 		JBrowse link
G Ltb4r leukotriene B4 receptor involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936722:232,320...233,802 JBrowse link
complement receptor mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 involved_in ISO (MGI:6189359|PMID:22632727) ARUK-UCL PMID:22632727 MGI:6189359 NCBI chrNW_004936588:3,985,732...4,023,221 JBrowse link
G C3ar1 complement C3a receptor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936892:347,547...355,143
Ensembl chrNW_004936892:347,842...349,296 		JBrowse link
G C5ar1 complement C5a receptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936664:1,026,216...1,033,438
Ensembl chrNW_004936664:1,032,304...1,033,374 		JBrowse link
G C5ar2 complement C5a receptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936664:1,047,997...1,050,612
Ensembl chrNW_004936664:1,047,997...1,049,016 		JBrowse link
G Cmklr2 chemerin chemokine-like receptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936631:2,544,951...2,580,306
Ensembl chrNW_004936631:2,545,241...2,546,308 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:780,173...827,628
Ensembl chrNW_004936671:782,135...827,771 		JBrowse link
G Gpr33 G protein-coupled receptor 33 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:6,074,140...6,078,747
Ensembl chrNW_004936494:6,074,140...6,078,747 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:6189359|PMID:22632727) ARUK-UCL PMID:22632727 MGI:6189359 NCBI chrNW_004936543:8,460,526...8,508,524
Ensembl chrNW_004936543:8,461,307...8,508,524 		JBrowse link
G LOC101964865 complement receptor type 1 involved_in ISO (PMID:16360013), (PMID:22962438) ARUK-UCL PMID:16360013 PMID:22962438 NCBI chrNW_004936557:5,185,831...5,284,999 JBrowse link
G LOC101971779 N-formyl peptide receptor 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937026:169,334...170,717
Ensembl chrNW_004937026:167,935...170,389 		JBrowse link
G LOC101973797 fMet-Leu-Phe receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937026:155,550...156,608
Ensembl chrNW_004937026:155,550...156,608 		JBrowse link
G Ltb4r leukotriene B4 receptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:232,320...233,802 JBrowse link
G Ptgdr2 prostaglandin D2 receptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936581:2,069,355...2,072,535
Ensembl chrNW_004936581:2,067,546...2,070,893 		JBrowse link
cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha kinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936563:3,233,913...3,296,671
Ensembl chrNW_004936563:3,235,181...3,296,257 		JBrowse link
G Becn1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,940,776...16,949,836
Ensembl chrNW_004936490:16,940,540...16,950,085 		JBrowse link
G Ipo5 importin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:12,231,970...12,271,639
Ensembl chrNW_004936472:12,229,922...12,271,964 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:445,340...448,801
Ensembl chrNW_004936888:445,549...448,392 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,141,840...1,200,638
Ensembl chrNW_004936524:1,140,971...1,200,638 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:8,555,966...8,562,829
Ensembl chrNW_004936531:8,555,637...8,562,885 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:2,763,755...2,809,229
Ensembl chrNW_004936545:2,763,596...2,809,709 		JBrowse link
G Tifa TRAF interacting protein with forkhead associated domain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936563:3,151,515...3,159,071
Ensembl chrNW_004936563:3,152,049...3,158,999 		JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:3,315,035...3,337,763
Ensembl chrNW_004936557:3,313,244...3,344,819 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,979,320...5,997,632
Ensembl chrNW_004936490:5,979,425...5,997,639 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22607805) UniProt PMID:22607805 NCBI chrNW_004936538:7,518,283...7,558,458
Ensembl chrNW_004936538:7,517,271...7,558,854 		JBrowse link
endolysosomal toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Washc4 WASH complex subunit 4 acts_upstream_of_or_within ISO (PMID:33749590) MGI PMID:33749590 NCBI chrNW_004936492:9,527,889...9,585,345
Ensembl chrNW_004936492:9,530,674...9,585,462 		JBrowse link
Fc receptor mediated stimulatory signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcer1g Fc fragment of IgE receptor Ig involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14764707) TreeGrafter
MGI		 PMID:14764707 GO_REF:0000118 NCBI chrNW_004936903:514,278...517,975
Ensembl chrNW_004936903:514,761...517,948 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo1g myosin IG involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,788,032...19,802,546
Ensembl chrNW_004936478:19,788,031...19,802,501 		JBrowse link
immune response-activating cell surface receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 involved_in ISO (PMID:18852879) UniProt PMID:18852879 NCBI chrNW_004936727:1,921,452...1,924,395 JBrowse link
innate immune response-activating signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr4 toll like receptor 4 ISO RGD PMID:19226379 RGD:2312509 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:16,721,306...16,778,249
Ensembl chrNW_004936469:16,721,677...16,774,903 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,917,978...2,965,336
Ensembl chrNW_004936668:2,950,124...2,962,572
Ensembl chrNW_004936668:2,950,124...2,962,572 		JBrowse link
MyD88-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004936473:26,602,373...26,692,507
Ensembl chrNW_004936473:26,602,324...26,692,285 		JBrowse link
MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12719478)
(PMID:14764662)
(PMID:12872135)		 Ensembl
MGI
InterPro		 PMID:12719478 PMID:12872135 PMID:14764662 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Reg3g regenerating family member 3 gamma involved_in ISO (MGI:3760234|PMID:17635956) UniProt PMID:17635956 MGI:3760234 NCBI chrNW_004936556:4,896,141...4,898,240 JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tlr6 toll like receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (MGI:5305352|PMID:22011580) UniProt PMID:22011580 MGI:5305352 NCBI chrNW_004936647:3,914,887...3,959,698
Ensembl chrNW_004936647:3,914,887...3,959,672 		JBrowse link
MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004936473:26,602,373...26,692,507
Ensembl chrNW_004936473:26,602,324...26,692,285 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12855817)
(PMID:12872135)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249
negative regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937135:11,350...21,235
Ensembl chrNW_004937135:8,990...21,913 		JBrowse link
negative regulation of B cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd22 CD22 molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:960,592...971,688
Ensembl chrNW_004936570:960,746...969,049 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb involved_in ISO (PMID:24169826) ARUK-UCL PMID:24169826 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:608,730...611,871
Ensembl chrNW_004936595:609,232...611,845 		JBrowse link
G Lpxn leupaxin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,750,819...3,784,488
Ensembl chrNW_004936581:3,751,277...3,784,503 		JBrowse link
G Plcl2 phospholipase C like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14517301) Ensembl
MGI		 PMID:14517301 GO_REF:0000107 NCBI chrNW_004936473:9,628,612...9,801,713
Ensembl chrNW_004936473:9,627,811...9,802,132 		JBrowse link
negative regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Aurkb aurora kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,553,190...3,555,167
Ensembl chrNW_004936599:3,553,193...3,555,162 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999) UniProt PMID:32911482 PMID:32912999 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:32715615) UniProt PMID:32715615 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Lyplal1 lysophospholipase like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936650:2,933,661...2,960,558
Ensembl chrNW_004936650:2,933,306...2,960,846 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:35322803) UniProt PMID:35322803 NCBI chrNW_004936512:10,732,129...10,754,885
Ensembl chrNW_004936512:10,732,151...10,756,912 		JBrowse link
G Ppp6c protein phosphatase 6 catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:13,284,652...13,320,936
Ensembl chrNW_004936487:13,283,931...13,321,526 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422 		JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:11,246,540...11,272,167
Ensembl chrNW_004936474:11,245,734...11,270,391 		JBrowse link
negative regulation of cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:10,774,793...10,780,041
Ensembl chrNW_004936512:10,774,213...10,796,268 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:4,305,859...4,375,785
Ensembl chrNW_004936478:4,312,536...4,374,857 		JBrowse link
G Tspan6 tetraspanin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936584:5,842,549...5,848,533
Ensembl chrNW_004936584:5,840,312...5,848,622 		JBrowse link
negative regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,371,400...2,376,608
Ensembl chrNW_004936677:2,371,418...2,376,608 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,940,776...16,949,836
Ensembl chrNW_004936490:16,940,540...16,950,085 		JBrowse link
G Riok3 RIO kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:2,921,272...2,949,288
Ensembl chrNW_004936550:2,921,227...2,950,164 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,697,965...1,710,363
Ensembl chrNW_004936581:1,697,947...1,710,738 		JBrowse link
negative regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936538:4,526,713...4,546,861
Ensembl chrNW_004936538:4,526,582...4,545,896 		JBrowse link
negative regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in ISO (PMID:38092000) UniProt PMID:38092000 NCBI chrNW_004936588:1,081,719...1,089,514
Ensembl chrNW_004936588:1,077,817...1,091,073 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,816,461...1,820,353
Ensembl chrNW_004936737:1,816,475...1,820,320 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (MGI:6787653|PMID:34615873) UniProt PMID:34615873 MGI:6787653 NCBI chrNW_004936504:5,351,354...5,394,856
Ensembl chrNW_004936504:5,351,029...5,396,034 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:23,567,251...23,659,708
Ensembl chrNW_004936473:23,567,230...23,658,240 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:36586411) UniProt PMID:36586411 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:30612879)
(MGI:6282153|PMID:30612879)		 UniProt PMID:30612879 MGI:6282153 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004936694:970,706...980,605 JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:25277106) UniProt PMID:25277106 NCBI chrNW_004936694:757,121...773,924 JBrowse link
G Pydc1 pyrin domain containing 1 NOT|involved_in ISO (PMID:24871464) UniProt PMID:24871464 NCBI chrNW_004936501:13,561,927...13,564,392 JBrowse link
G Sirt2 sirtuin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23502856) Ensembl
MGI		 PMID:23502856 GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6391726|PMID:29887864)
(PMID:32514138)		 ARUK-UCL
Ensembl		 PMID:29887864 PMID:32514138 GO_REF:0000107 MGI:6391726 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Trim31 tripartite motif containing 31 involved_in ISO (PMID:27929086)
(MGI:5907951|PMID:27929086)		 UniProt PMID:27929086 MGI:5907951 NCBI chrNW_004936723:934,808...945,279 JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,201,288...16,203,818
Ensembl chrNW_004936487:16,199,742...16,203,858 		JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:3,155,934...3,293,224
Ensembl chrNW_004936480:3,154,690...3,293,230 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
G Znrf4 zinc and ring finger 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,142,687...3,143,793
Ensembl chrNW_004936588:3,142,736...3,143,793 		JBrowse link
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,371,400...2,376,608
Ensembl chrNW_004936677:2,371,418...2,376,608 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:16,940,776...16,949,836
Ensembl chrNW_004936490:16,940,540...16,950,085 		JBrowse link
G Gpatch3 G-patch domain containing 3 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:11,298,802...11,310,609
Ensembl chrNW_004936474:11,298,620...11,310,637 		JBrowse link
G Nlrx1 NLR family member X1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21703540) Ensembl
MGI		 PMID:21703540 GO_REF:0000107 NCBI chrNW_004936542:4,105,980...4,121,176
Ensembl chrNW_004936542:4,109,136...4,122,978 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,206,222...5,251,042
Ensembl chrNW_004936594:5,205,659...5,251,026 		JBrowse link
G Rnf125 ring finger protein 125 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,228,903...1,268,651
Ensembl chrNW_004936682:1,231,823...1,268,657 		JBrowse link
G Sec14l1 SEC14 like lipid binding 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:2,048,146...2,100,808
Ensembl chrNW_004936594:2,048,054...2,100,859 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,395,130...3,419,704
Ensembl chrNW_004936619:3,395,687...3,419,472 		JBrowse link
negative regulation of T cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btnl2 butyrophilin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16751379) Ensembl
MGI		 PMID:16751379 GO_REF:0000107 NCBI chrNW_004936727:567,656...587,784
Ensembl chrNW_004936727:567,656...587,784 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:38225265) UniProt PMID:38225265 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14738763) Ensembl
MGI		 PMID:14738763 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388 		JBrowse link
G Cd160 CD160 molecule involved_in ISO (PMID:18193050) UniProt PMID:18193050 NCBI chrNW_004936867:478,625...485,905 JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (MGI:2672999|PMID:12883552) UniProt PMID:12883552 MGI:2672999 NCBI chrNW_004936562:2,690,907...2,733,455
Ensembl chrNW_004936562:2,690,858...2,733,620 		JBrowse link
G Dusp22 dual specificity phosphatase 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24714587) Ensembl
MGI		 PMID:24714587 GO_REF:0000107 NCBI chrNW_004936633:1,459,487...1,528,080
Ensembl chrNW_004936633:1,459,386...1,528,082 		JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:325,443...338,426 JBrowse link
G Elf1 E74 like ETS transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14738763) Ensembl
MGI		 PMID:14738763 GO_REF:0000107 NCBI chrNW_004936667:449,682...553,780
Ensembl chrNW_004936667:500,195...553,808 		JBrowse link
G Ezr ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:10,413,374...10,457,771
Ensembl chrNW_004936489:10,412,710...10,458,201 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870) ARUK-UCL PMID:18619870 MGI:3803048 NCBI chrNW_004936474:14,102,080...14,119,592
Ensembl chrNW_004936474:14,102,423...14,119,558 		JBrowse link
G Lgals3 galectin 3 involved_in ISO (MGI:4355752|PMID:19706535) BHF-UCL PMID:19706535 MGI:4355752 NCBI chrNW_004936697:20,861...38,568
Ensembl chrNW_004936697:27,145...38,586 		JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 involved_in ISO (PMID:18424730) UniProt PMID:18424730 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G LOC101957863 guanylate-binding protein 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:52,642...67,706
Ensembl chrNW_004936732:52,598...69,691 		JBrowse link
G LOC101960905 butyrophilin subfamily 2 member A2-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:2,149,443...2,157,518
Ensembl chrNW_004936671:2,149,361...2,157,536 		JBrowse link
G Pawr pro-apoptotic WT1 regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12970181) Ensembl
MGI		 PMID:12970181 GO_REF:0000107 NCBI chrNW_004936698:650,225...746,593
Ensembl chrNW_004936698:650,953...747,057 		JBrowse link
G Phpt1 phosphohistidine phosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,065,901...1,067,214
Ensembl chrNW_004936669:1,065,900...1,067,214 		JBrowse link
G Prnp prion protein (Kanno blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,104,829...14,118,614
Ensembl chrNW_004936485:14,104,831...14,118,629 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:2,390,004...2,472,039
Ensembl chrNW_004936626:2,389,868...2,445,927 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:18056643) UniProt PMID:18056643 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9064344) Ensembl
MGI		 PMID:9064344 GO_REF:0000107 NCBI chrNW_004936709:864,206...884,630
Ensembl chrNW_004936709:864,197...884,610 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,161,764...1,234,800
Ensembl chrNW_004936562:1,165,304...1,211,817 		JBrowse link
G Pvrig PVR related immunoglobulin domain containing involved_in ISO (PMID:26755705) UniProt PMID:26755705 NCBI chrNW_004936543:465,781...467,150 JBrowse link
G Sh2d1a SH2 domain containing 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,258,953...6,281,552
Ensembl chrNW_004936479:6,258,953...6,281,552 		JBrowse link
G Sla2 Src like adaptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,408,531...4,427,476
Ensembl chrNW_004936561:4,413,108...4,428,110 		JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,323,905...4,329,940
Ensembl chrNW_004936542:4,323,408...4,330,077 		JBrowse link
G Ubash3a ubiquitin associated and SH3 domain containing A acts_upstream_of_or_within ISO (PMID:14738763) MGI PMID:14738763 NCBI chrNW_004936500:1,437,658...1,474,705 JBrowse link
negative regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490396|PMID:23609450) UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:26599367)
(MGI:6162316|PMID:26599367)		 UniProt PMID:26599367 MGI:6162316 NCBI chrNW_004936573:1,567,798...1,662,442 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15220916) Ensembl
MGI		 PMID:15220916 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Tlr6 toll like receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
negative regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
G Rnf170 ring finger protein 170 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937108:111,111...147,077
Ensembl chrNW_004937108:117,881...150,498 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679 		JBrowse link
negative regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490396|PMID:23609450) UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
G Bpifb1 BPI fold containing family B member 1 involved_in ISO (PMID:21900486) UniProt PMID:21900486 NCBI chrNW_004936561:7,227,045...7,277,393 JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:28609714) UniProt PMID:28609714 NCBI chrNW_004936573:1,567,798...1,662,442 JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,504,562...6,519,219
Ensembl chrNW_004936557:6,504,509...6,519,219 		JBrowse link
G Sqstm1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:943,080...955,296
Ensembl chrNW_004936739:938,745...955,263 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:4,305,859...4,375,785
Ensembl chrNW_004936478:4,312,536...4,374,857 		JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:19412184) UniProt PMID:19412184 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856 		JBrowse link
negative regulation of toll-like receptor 5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfaip3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
negative regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gramd4 GRAM domain containing 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936629:3,348,461...3,431,975
Ensembl chrNW_004936629:3,346,495...3,432,096 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO (PMID:14716310) UniProt PMID:14716310 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,021,418...3,073,080
Ensembl chrNW_004936588:3,022,321...3,072,993 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,504,562...6,519,219
Ensembl chrNW_004936557:6,504,509...6,519,219 		JBrowse link
negative regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,051,636...2,061,651
Ensembl chrNW_004936588:2,052,425...2,061,641 		JBrowse link
G Gpr108 G protein-coupled receptor 108 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,027,068...4,034,188
Ensembl chrNW_004936588:4,027,392...4,034,162 		JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:608,730...611,871
Ensembl chrNW_004936595:609,232...611,845 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806 		JBrowse link
G Irf4 interferon regulatory factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16236719) Ensembl
MGI		 PMID:16236719 GO_REF:0000107 NCBI chrNW_004936633:1,565,293...1,580,859
Ensembl chrNW_004936633:1,564,637...1,580,859 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:5,752,319...5,846,074
Ensembl chrNW_004936540:5,752,197...5,845,159 		JBrowse link
G Lrrc14 leucine rich repeat containing 14 involved_in ISO (PMID:27426725) UniProt PMID:27426725 NCBI chrNW_004936470:7,751,426...7,755,272 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936727:1,950,356...1,963,847
Ensembl chrNW_004936727:1,950,057...1,963,245 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22763455) Ensembl
MGI		 PMID:22763455 GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936535:3,911,904...3,950,675
Ensembl chrNW_004936535:3,912,606...3,951,503 		JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (MGI:5487531|PMID:20728433) UniProt PMID:20728433 MGI:5487531 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
G Rnf115 ring finger protein 115 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936867:492,561...553,498
Ensembl chrNW_004936867:490,248...551,552 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,158,628...12,179,993
Ensembl chrNW_004936474:12,158,628...12,179,993 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,893,185...4,910,779
Ensembl chrNW_004936471:4,893,078...4,910,859 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chrNW_004936538:7,518,283...7,558,458
Ensembl chrNW_004936538:7,517,271...7,558,854 		JBrowse link
NLRP1 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlrp1 NLR family pyrin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151 		JBrowse link
NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23502856) Ensembl
MGI		 PMID:23502856 GO_REF:0000107 NCBI chrNW_004936837:300,765...319,742
Ensembl chrNW_004936837:300,715...319,623 		JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28928055) Ensembl
MGI		 PMID:28928055 GO_REF:0000107 NCBI chrNW_004936548:5,125,583...5,132,490
Ensembl chrNW_004936548:5,125,555...5,133,078 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22753929) Ensembl
MGI		 PMID:22753929 GO_REF:0000107 NCBI chrNW_004936864:709,693...732,119
Ensembl chrNW_004936864:709,709...731,718 		JBrowse link
G Pycard PYD and CARD domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,550,702...13,552,774
Ensembl chrNW_004936501:13,550,679...13,552,805 		JBrowse link
G Sirt2 sirtuin 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23502856) Ensembl
MGI		 PMID:23502856 GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
NLRP6 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlrp6 NLR family pyrin domain containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:145,642...151,716
Ensembl chrNW_004936888:145,642...151,182 		JBrowse link
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf34 ring finger protein 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,901,386...2,918,976
Ensembl chrNW_004936558:2,901,512...2,919,018 		JBrowse link
nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116 		JBrowse link
nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inava innate immunity activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,443,053...3,458,184
Ensembl chrNW_004936567:3,443,042...3,464,506 		JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G LOC101974441 purine nucleoside phosphorylase LACC1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936791:80,245...91,172
Ensembl chrNW_004936791:80,245...93,951 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12527755)
(PMID:23892723)		 MGI
Ensembl		 PMID:12527755 PMID:23892723 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936665:1,654,045...1,690,955
Ensembl chrNW_004936665:1,668,311...1,690,918 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12527755) MGI
Ensembl		 PMID:12527755 GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116 		JBrowse link
pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004936859:797,469...807,036 JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936858:316,954...321,668
Ensembl chrNW_004936858:316,954...321,668 		JBrowse link
G Inava innate immunity activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,443,053...3,458,184
Ensembl chrNW_004936567:3,443,042...3,464,506 		JBrowse link
G LOC101974441 purine nucleoside phosphorylase LACC1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936791:80,245...91,172
Ensembl chrNW_004936791:80,245...93,951 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:3,969,108...4,047,022
Ensembl chrNW_004936532:3,969,081...4,046,976 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:8,555,966...8,562,829
Ensembl chrNW_004936531:8,555,637...8,562,885 		JBrowse link
positive regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961426 guanylate-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936991:83,446...95,310
Ensembl chrNW_004936991:83,465...95,416 		JBrowse link
positive regulation of antigen receptor-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
positive regulation of B cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800 		JBrowse link
G Cmtm3 CKLF like MARVEL transmembrane domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15196959) Ensembl
MGI		 PMID:15196959 GO_REF:0000107 NCBI chrNW_004936475:16,929,726...16,935,403
Ensembl chrNW_004936475:16,929,628...16,931,385 		JBrowse link
G Foxp1 forkhead box P1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324 		JBrowse link
G Nfam1 NFAT activating protein with ITAM motif 1 involved_in ISO (MGI:3044463|PMID:15143214) HGNC-UCL PMID:15143214 MGI:3044463 NCBI chrNW_004936718:367,996...399,030 JBrowse link
G Prkcb protein kinase C beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,410,273...8,729,238
Ensembl chrNW_004936501:8,437,715...8,728,716 		JBrowse link
G Prkch protein kinase C eta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:5,426,243...5,638,250
Ensembl chrNW_004936495:5,426,243...5,638,245 		JBrowse link
G Slc39a10 solute carrier family 39 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25074919) Ensembl
MGI		 PMID:25074919 GO_REF:0000107 NCBI chrNW_004936506:3,298,259...3,425,126
Ensembl chrNW_004936506:3,298,245...3,396,291 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936582:877,241...908,697
Ensembl chrNW_004936582:877,474...913,770 		JBrowse link
positive regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:37832545) UniProt PMID:37832545 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 involved_in ISO (PMID:36745868) UniProt PMID:36745868 NCBI chrNW_004936778:823,376...846,843
Ensembl chrNW_004936778:829,550...848,833 		JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,207,147...2,234,573
Ensembl chrNW_004936492:2,210,197...2,234,489 		JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:1,711,756...1,743,306
Ensembl chrNW_004936479:1,711,713...1,741,167 		JBrowse link
positive regulation of Fc receptor mediated stimulatory signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:16177098 RGD:1578516 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Ptprj protein tyrosine phosphatase receptor type J involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,161,764...1,234,800
Ensembl chrNW_004936562:1,165,304...1,211,817 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413 		JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chrNW_004936487:18,305,537...18,411,170
Ensembl chrNW_004936487:18,305,488...18,410,952 		JBrowse link
positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
positive regulation of mast cell activation by Fc-epsilon receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (MGI:5586645|PMID:24586680) UniProt PMID:24586680 MGI:5586645 NCBI chrNW_004936524:8,252,321...8,290,747
Ensembl chrNW_004936524:8,252,381...8,289,157 		JBrowse link
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:2,191,604...2,338,832
Ensembl chrNW_004936598:2,191,735...2,340,453 		JBrowse link
G Ddx60 DExD/H-box helicase 60 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:649,217...735,499
Ensembl chrNW_004936516:649,191...731,639 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,940,776...16,949,836
Ensembl chrNW_004936490:16,940,540...16,950,085 		JBrowse link
positive regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23502856) Ensembl
MGI		 PMID:23502856 GO_REF:0000107 NCBI chrNW_004936837:300,765...319,742
Ensembl chrNW_004936837:300,715...319,623 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936927:341,114...380,817
Ensembl chrNW_004936927:341,253...376,700 		JBrowse link
G Btk Bruton tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,770,896...7,820,555
Ensembl chrNW_004936502:7,804,824...7,820,569 		JBrowse link
G Dhx33 DEAH-box helicase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,345,153...2,367,247
Ensembl chrNW_004936677:2,345,315...2,364,802 		JBrowse link
G LOC101961426 guanylate-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936991:83,446...95,310
Ensembl chrNW_004936991:83,465...95,416 		JBrowse link
G LOC101964473 caspase-4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:3,242,381...3,269,821 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mark4 microtubule affinity regulating kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:1,764,239...1,789,745
Ensembl chrNW_004936706:1,762,869...1,788,821 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Nek7 NIMA related kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,685,619...5,815,094
Ensembl chrNW_004936567:5,685,125...5,808,499 		JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:32514138) ARUK-UCL
Ensembl		 PMID:32514138 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:1,031,118...1,055,961
Ensembl chrNW_004936647:1,031,119...1,055,149 		JBrowse link
G Prkd1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Stmp1 short transmembrane mitochondrial protein 1 involved_in ISO (MGI:6384515|PMID:31836654) UniProt PMID:31836654 MGI:6384515 NCBI chrNW_004936592:435,243...447,999 JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:5546292|PMID:23812099) UniProt PMID:23812099 MGI:5546292 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
G Usp50 ubiquitin specific peptidase 50 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28094437) MGI
Ensembl		 PMID:28094437 GO_REF:0000107 NCBI chrNW_004936471:12,522,361...12,552,611
Ensembl chrNW_004936471:12,521,731...12,552,346 		JBrowse link
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 involved_in ISO (PMID:38092000) UniProt PMID:38092000 NCBI chrNW_004936581:4,839,511...4,865,406
Ensembl chrNW_004936581:4,839,511...4,865,140 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:6278628|PMID:21277849), (MGI:6450424|PMID:19570976) UniProt PMID:19570976 PMID:21277849 MGI:6278628 MGI:6450424 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Slc46a2 solute carrier family 46 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:670,239...674,061
Ensembl chrNW_004936559:670,231...679,766 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955831 heat shock 70 kDa protein 1 involved_in ISO (PMID:24790089) UniProt PMID:24790089 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 involved_in ISO (PMID:24790089) UniProt PMID:24790089 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:15,183,493...15,193,069
Ensembl chrNW_004936491:15,183,804...15,192,950 		JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004936599:3,099,256...3,110,566
Ensembl chrNW_004936599:3,099,256...3,110,565 		JBrowse link
G Slc15a3 solute carrier family 15 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,985,062...1,996,924
Ensembl chrNW_004936581:1,984,344...1,996,924 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:5571205 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
positive regulation of pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:4,839,511...4,865,406
Ensembl chrNW_004936581:4,839,511...4,865,140 		JBrowse link
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:2,191,604...2,338,832
Ensembl chrNW_004936598:2,191,735...2,340,453 		JBrowse link
G Ddx60 DExD/H-box helicase 60 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:649,217...735,499
Ensembl chrNW_004936516:649,191...731,639 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,940,776...16,949,836
Ensembl chrNW_004936490:16,940,540...16,950,085 		JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase like involved_in ISO (PMID:25925578) ARUK-UCL PMID:25925578 NCBI chrNW_004936668:43,960...50,246 JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:14,243,325...14,363,461
Ensembl chrNW_004936474:14,243,296...14,363,500 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,067,318...11,154,133
Ensembl chrNW_004936493:11,067,202...11,155,377 		JBrowse link
G Trim15 tripartite motif containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936723:869,019...880,200
Ensembl chrNW_004936723:873,274...880,065 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:978,318...1,094,729
Ensembl chrNW_004936545:978,280...1,095,659 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435) UniProt PMID:21102435 NCBI chrNW_004936592:3,321,564...3,379,015
Ensembl chrNW_004936592:3,321,454...3,358,983 		JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30193849) UniProt PMID:30193849 NCBI chrNW_004936670:3,048,914...3,049,809 JBrowse link
positive regulation of T cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:11435465) MGI PMID:11435465 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Card11 caspase recruitment domain family member 11 involved_in ISO (MGI:6695669|PMID:12154356)
(PMID:12154360)		 UniProt PMID:12154356 PMID:12154360 MGI:6695669 NCBI chrNW_004936823:580,438...621,298
Ensembl chrNW_004936823:581,955...621,208 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,575,764...15,579,766
Ensembl chrNW_004936490:15,575,764...15,579,757 		JBrowse link
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16501569) Ensembl
MGI		 PMID:16501569 GO_REF:0000107 NCBI chrNW_004936475:3,750,917...3,812,118
Ensembl chrNW_004936475:3,750,882...3,812,118 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,280,254...1,306,964
Ensembl chrNW_004936809:1,257,654...1,301,813 		JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 involved_in ISO (PMID:18796614) BHF-UCL PMID:18796614 NCBI chrNW_004936706:940,585...952,484 JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101972231 T-cell receptor-associated transmembrane adapter 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11390434) MGI
TreeGrafter
Ensembl		 PMID:11390434 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936645:2,459,524...2,491,016
Ensembl chrNW_004936645:2,464,548...2,491,016 		JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936706:1,470,910...1,498,986
Ensembl chrNW_004936706:1,470,738...1,498,993 		JBrowse link
G Prkd2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:524,532...551,451
Ensembl chrNW_004936664:522,910...551,469 		JBrowse link
G Pvr PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936706:1,356,690...1,369,547 JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,673,092...6,679,715
Ensembl chrNW_004936557:6,673,065...6,683,468 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Rps3 ribosomal protein S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,198,189...4,204,531
Ensembl chrNW_004936498:4,198,130...4,204,528 		JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936891:512,882...549,676
Ensembl chrNW_004936891:512,671...534,025 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:38225265) UniProt PMID:38225265 NCBI chrNW_004936476:17,178,981...17,322,600
Ensembl chrNW_004936476:17,181,214...17,322,163 		JBrowse link
positive regulation of toll-like receptor 13 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (MGI:5775261|PMID:25848864) UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
positive regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:5788395|PMID:16267105) UniProt PMID:16267105 MGI:5788395 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G LOC101967032 cytochrome b-245 light chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:26599367), (PMID:28471450)
(MGI:6162316|PMID:26599367)		 UniProt PMID:26599367 PMID:28471450 MGI:6162316 NCBI chrNW_004936573:1,567,798...1,662,442 JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:4,022,175...4,093,404
Ensembl chrNW_004936531:4,021,711...4,068,459 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tlr1 toll like receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:6,582,430...6,591,128
Ensembl chrNW_004936482:6,582,584...6,584,971 		JBrowse link
positive regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
G Flot1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071 		JBrowse link
G LOC101955400 AP-1 complex subunit sigma-3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:5,574,591...5,604,948
Ensembl chrNW_004936569:5,490,319...5,544,250
Ensembl chrNW_004936569:5,490,319...5,544,250 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19734906) Ensembl
MGI		 PMID:19734906 GO_REF:0000107 NCBI chrNW_004936491:8,985,074...9,040,863
Ensembl chrNW_004936491:8,985,074...9,041,244 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (MGI:4943396|PMID:17322885) BHF-UCL PMID:17322885 MGI:4943396 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Trim3 tripartite motif containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:494,460...524,305
Ensembl chrNW_004936842:501,127...524,347 		JBrowse link
positive regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:142,281...153,575
Ensembl chrNW_004936549:141,512...153,602 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:5788395|PMID:16267105) UniProt PMID:16267105 MGI:5788395 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Ifi35 interferon induced protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,707,997...17,710,294
Ensembl chrNW_004936490:17,708,071...17,713,492 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,017,471...3,035,481
Ensembl chrNW_004936561:3,016,926...3,035,552 		JBrowse link
G LOC101955400 AP-1 complex subunit sigma-3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:5,574,591...5,604,948
Ensembl chrNW_004936569:5,490,319...5,544,250
Ensembl chrNW_004936569:5,490,319...5,544,250 		JBrowse link
G Ltf lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:344,287...373,788
Ensembl chrNW_004936596:344,274...373,952 		JBrowse link
G Ninj1 ninjurin 1 involved_in ISO (MGI:6694429|PMID:25860173) UniProt PMID:25860173 MGI:6694429 NCBI chrNW_004936487:2,486,831...2,531,943
Ensembl chrNW_004936487:2,487,904...2,491,827 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19734906) Ensembl
MGI		 PMID:19734906 GO_REF:0000107 NCBI chrNW_004936491:8,985,074...9,040,863
Ensembl chrNW_004936491:8,985,074...9,041,244 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Znrf1 zinc and ring finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,814,200...23,918,871
Ensembl chrNW_004936475:23,814,194...23,916,530 		JBrowse link
positive regulation of toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,770,896...7,820,555
Ensembl chrNW_004936502:7,804,824...7,820,569 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:3,921,824...3,936,027
Ensembl chrNW_004936532:3,921,807...3,936,042 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25238095), (PMID:32433612)
(MGI:4848237|PMID:21045126), (MGI:6357091|PMID:25238095)		 UniProt PMID:21045126 PMID:25238095 PMID:32433612 MGI:4848237 MGI:6357091 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936553:6,628,131...6,629,027
Ensembl chrNW_004936553:6,628,131...6,629,027 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (PMID:25848864)
(MGI:5775261|PMID:25848864)		 UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
positive regulation of toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,770,896...7,820,555
Ensembl chrNW_004936502:7,804,824...7,820,569 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936553:6,628,131...6,629,027
Ensembl chrNW_004936553:6,628,131...6,629,027 		JBrowse link
positive regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:3,921,824...3,936,027
Ensembl chrNW_004936532:3,921,807...3,936,042 		JBrowse link
G Rtn4 reticulon 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25238095)
(MGI:4848237|PMID:21045126), (MGI:6278628|PMID:21277849), (MGI:6357091|PMID:25238095)		 UniProt PMID:21045126 PMID:21277849 PMID:25238095 MGI:4848237 MGI:6278628 MGI:6357091 NCBI chrNW_004936660:481,772...493,567 JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (MGI:5775261|PMID:25848864) UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004936476:18,603,620...18,612,050 JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 involved_in ISO (PMID:38169466) UniProt PMID:38169466 NCBI chrNW_004936695:776,822...830,693
Ensembl chrNW_004936695:776,822...832,361 		JBrowse link
positive regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdi1 GDP dissociation inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,188,793...1,194,816
Ensembl chrNW_004936809:1,188,628...1,194,863 		JBrowse link
G Lrch4 leucine rich repeats and calponin homology domain containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:632,255...643,639
Ensembl chrNW_004936543:632,255...643,686 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (MGI:5487531|PMID:20728433) UniProt PMID:20728433 MGI:5487531 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
regulation of B cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd19 CD19 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,793,903...11,807,410
Ensembl chrNW_004936501:11,793,891...11,804,162 		JBrowse link
G Fcmr Fc mu receptor involved_in ISO (MGI:5888941|PMID:28135254) UniProt PMID:28135254 MGI:5888941 NCBI chrNW_004936557:5,707,138...5,718,192 JBrowse link
G Gcsam germinal center associated signaling and motility involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936834:919,655...931,253
Ensembl chrNW_004936834:922,222...931,253 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
regulation of Fc receptor mediated stimulatory signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csk C-terminal Src kinase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:9325302 GO_REF:0000118 RGD:2303720 NCBI chrNW_004936471:33,757,778...33,777,871
Ensembl chrNW_004936471:33,757,772...33,778,933 		JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa ISO RGD PMID:16482158 PMID:22184119 RGD:11041001 RGD:2293335 NCBI chrNW_004937131:15,542...22,099 JBrowse link
G LOC101967799 leukocyte surface antigen CD47 involved_in ISO PMID:21401967 ARUK-UCL PMID:21401967 RGD:13792533 NCBI chrNW_004936645:1,363,406...1,408,624 JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO PMID:18579528 UniProt PMID:18579528 RGD:2303650 NCBI chrNW_004936519:8,759,702...8,790,823 JBrowse link
G Pten phosphatase and tensin homolog ISO negative regulation RGD PMID:18056380 RGD:2292524 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Rabgef1 RAB guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15235600)
(PMID:17341663)		 Ensembl
MGI		 PMID:15235600 PMID:17341663 GO_REF:0000107 NCBI chrNW_004936543:7,405,070...7,447,940
Ensembl chrNW_004936543:7,404,944...7,447,173 		JBrowse link
regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,686,247...2,693,633
Ensembl chrNW_004936647:2,686,414...2,693,636 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:445,340...448,801
Ensembl chrNW_004936888:445,549...448,392 		JBrowse link
regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf7 interferon regulatory factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:445,340...448,801
Ensembl chrNW_004936888:445,549...448,392 		JBrowse link
regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:1,127,047...1,157,263
Ensembl chrNW_004936663:1,126,977...1,157,137 		JBrowse link
regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a2 solute carrier family 15 member 2 involved_in ISO (MGI:6192142|PMID:29784761) UniProt PMID:29784761 MGI:6192142 NCBI chrNW_004936536:8,280,537...8,316,011
Ensembl chrNW_004936536:8,280,448...8,316,064 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:6192142|PMID:29784761) UniProt PMID:29784761 MGI:6192142 NCBI chrNW_004936660:481,772...493,567 JBrowse link
regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004936599:3,099,256...3,110,566
Ensembl chrNW_004936599:3,099,256...3,110,565 		JBrowse link
regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321 		JBrowse link
regulation of T cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10 immune signaling adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14614861) Ensembl
MGI		 PMID:14614861 GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (PMID:14752163) MGI PMID:14752163 NCBI chrNW_004936474:15,293,115...15,314,072
Ensembl chrNW_004936474:15,305,050...15,313,668 		JBrowse link
G Malt1 MALT1 paracaspase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14614861) Ensembl
MGI		 PMID:14614861 GO_REF:0000107 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677 		JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:28598420) Ensembl
MGI		 PMID:28598420 GO_REF:0000107 NCBI chrNW_004936891:512,882...549,676
Ensembl chrNW_004936891:512,671...534,025 		JBrowse link
regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot2 flotillin 2 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004936538:5,071,546...5,090,287
Ensembl chrNW_004936538:5,071,546...5,090,313 		JBrowse link
G Hcfc2 host cell factor C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28970238) Ensembl
MGI		 PMID:28970238 GO_REF:0000107 NCBI chrNW_004936492:10,390,603...10,426,232
Ensembl chrNW_004936492:10,390,268...10,426,206 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,580,495...7,647,471
Ensembl chrNW_004936473:7,579,780...7,611,923 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:9,477,483...9,526,692
Ensembl chrNW_004936492:9,477,373...9,526,692 		JBrowse link
G Flot1 flotillin 1 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004936837:387,012...401,076
Ensembl chrNW_004936837:380,288...401,071 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537 		JBrowse link
regulation of toll-like receptor 6 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Esr1 estrogen receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22659029) Ensembl
MGI		 PMID:22659029 GO_REF:0000107 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:6,610,565...6,618,509
Ensembl chrNW_004936537:6,610,565...6,618,450 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (MGI:6158883|PMID:20616063) UniProt PMID:20616063 MGI:6158883 NCBI chrNW_004936573:1,567,798...1,662,442 JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936553:6,628,131...6,629,027
Ensembl chrNW_004936553:6,628,131...6,629,027 		JBrowse link
RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clpb ClpB family mitochondrial disaggregase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,590,655...1,730,815
Ensembl chrNW_004936498:1,590,655...1,730,815 		JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22745163) Ensembl
MGI		 PMID:22745163 GO_REF:0000107 NCBI chrNW_004936570:1,723,966...1,791,784
Ensembl chrNW_004936570:1,729,841...1,791,778 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22745163) Ensembl
MGI		 PMID:22745163 GO_REF:0000107 NCBI chrNW_004936485:14,842,778...14,859,163
Ensembl chrNW_004936485:14,842,160...14,859,202 		JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:2,917,978...2,965,336
Ensembl chrNW_004936668:2,950,124...2,962,572
Ensembl chrNW_004936668:2,950,124...2,962,572 		JBrowse link
G Phb1 prohibitin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,127,065...12,138,870 JBrowse link
G Phb2 prohibitin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:854,493...859,182
Ensembl chrNW_004936709:854,698...858,851 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,141,840...1,200,638
Ensembl chrNW_004936524:1,140,971...1,200,638 		JBrowse link
G Rnf135 ring finger protein 135 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:2,741,308...2,757,042
Ensembl chrNW_004936538:2,741,220...2,757,240 		JBrowse link
G Trim25 tripartite motif containing 25 NOT|involved_in ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004936490:5,979,320...5,997,632
Ensembl chrNW_004936490:5,979,425...5,997,639 		JBrowse link
stimulatory C-type lectin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chrNW_004936902:436,224...446,435 JBrowse link
G LOC101955362 natural killer cells antigen CD94 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936902:302,811...309,379
Ensembl chrNW_004936902:302,821...307,648 		JBrowse link
G LOC101976242 NKG2-D type II integral membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936902:216,495...229,150
Ensembl chrNW_004936902:216,495...229,141 		JBrowse link
G LOC110597197 killer cell lectin-like receptor subfamily E member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936902:326,796...329,353 JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:457,993...460,735
Ensembl chrNW_004936570:458,054...460,579 		JBrowse link
stimulatory killer cell immunoglobulin-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:457,993...460,735
Ensembl chrNW_004936570:458,054...460,579 		JBrowse link
T cell receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18305217) Ensembl
MGI		 PMID:18305217 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Ada adenosine deaminase acts_upstream_of ISO (PMID:11435465) MGI PMID:11435465 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Bmx BMX non-receptor tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:4,914,643...4,962,134
Ensembl chrNW_004936470:4,914,756...4,962,129 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18228248) Ensembl
MGI		 PMID:18228248 GO_REF:0000107 NCBI chrNW_004936592:4,728,371...4,833,830
Ensembl chrNW_004936592:4,737,011...4,834,664 		JBrowse link
G Btk Bruton tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
G Btn1a1 butyrophilin subfamily 1 member A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:2,209,521...2,217,981
Ensembl chrNW_004936671:2,209,410...2,217,982 		JBrowse link
G Btn3a3 butyrophilin subfamily 3 member A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:2,133,363...2,146,259 JBrowse link
G Btnl2 butyrophilin like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:567,656...587,784
Ensembl chrNW_004936727:567,656...587,784 		JBrowse link
G Btnl9 butyrophilin like 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936826:509,265...526,810
Ensembl chrNW_004936826:513,296...526,105 		JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17028169) Ensembl
MGI		 PMID:17028169 GO_REF:0000107 NCBI chrNW_004936512:6,652,836...6,666,171
Ensembl chrNW_004936512:6,653,777...6,666,758 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15637280), (PMID:17028169) Ensembl
MGI		 PMID:15637280 PMID:17028169 GO_REF:0000107 NCBI chrNW_004936469:25,494,820...25,745,783
Ensembl chrNW_004936469:25,494,883...25,740,223 		JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 acts_upstream_of_or_within ISO (PMID:23793062) MGI PMID:23793062 NCBI chrNW_004936475:18,036,233...18,049,144
Ensembl chrNW_004936475:18,035,994...18,049,129 		JBrowse link
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12697763) Ensembl
MGI		 PMID:12697763 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388 		JBrowse link
G Cd247 CD247 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11435465) TreeGrafter
MGI		 PMID:11435465 GO_REF:0000118 NCBI chrNW_004936481:18,544,129...18,605,239
Ensembl chrNW_004936481:18,597,335...18,604,097 		JBrowse link
G Cd276 CD276 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:32,864,778...32,892,044
Ensembl chrNW_004936471:32,864,781...32,892,095 		JBrowse link
G Cd28 CD28 molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23793062) Ensembl
MGI
TreeGrafter		 PMID:23793062 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936631:335,411...363,407
Ensembl chrNW_004936631:335,411...363,407 		JBrowse link
G Cd2ap CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14512504) Ensembl
MGI		 PMID:14512504 GO_REF:0000107 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Cd3e CD3e molecule acts_upstream_of_or_within ISO (PMID:10485657) MGI PMID:10485657 NCBI chrNW_004936542:3,379,361...3,390,677 JBrowse link
G Cd8a CD8 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:885,301...891,247
Ensembl chrNW_004936712:885,458...890,852 		JBrowse link
G Cd8b CD8 subunit beta involved_in ISO (PMID:17145893) ComplexPortal PMID:17145893 NCBI chrNW_004936712:828,073...841,889 JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18305217) Ensembl
MGI		 PMID:18305217 GO_REF:0000107 NCBI chrNW_004936619:2,447,686...2,479,589
Ensembl chrNW_004936619:2,447,614...2,479,805 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte associated protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936631:484,356...489,643
Ensembl chrNW_004936631:484,356...489,643 		JBrowse link
G Dennd1b DENN domain containing 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936567:6,131,433...6,353,003
Ensembl chrNW_004936567:6,134,179...6,348,086 		JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:1,196,111...1,205,321
Ensembl chrNW_004936558:1,196,068...1,205,867 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:4,150,504...4,156,483
Ensembl chrNW_004936488:4,150,460...4,156,480 		JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,075,503...26,187,459
Ensembl chrNW_004936474:26,075,204...26,187,459 		JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,213,036...5,217,670
Ensembl chrNW_004936493:5,213,055...5,217,664 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,716,333...5,724,869
Ensembl chrNW_004936578:5,715,512...5,725,096 		JBrowse link
G Ermap erythroblast membrane associated protein (Scianna blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:24,149,628...24,161,492
Ensembl chrNW_004936474:24,149,583...24,161,463 		JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:3,234,603...3,265,484
Ensembl chrNW_004936596:3,252,826...3,265,359 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32610127) Ensembl
MGI		 PMID:32610127 GO_REF:0000107 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179 		JBrowse link
G Foxp3 forkhead box P3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10072494), (PMID:11265635) Ensembl
MGI		 PMID:10072494 PMID:11265635 GO_REF:0000107 NCBI chrNW_004936721:1,118,376...1,125,282
Ensembl chrNW_004936721:1,118,782...1,132,308 		JBrowse link
G Fyb2 FYN binding protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936522:4,802,274...4,867,954
Ensembl chrNW_004936522:4,802,397...4,867,183 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880 		JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21444916) Ensembl
MGI		 PMID:21444916 GO_REF:0000107 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958 		JBrowse link
G Icoslg inducible T cell costimulator ligand involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936500:164,659...173,144
Ensembl chrNW_004936500:164,603...173,155 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:21444916) MGI PMID:21444916 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Itk IL2 inducible T cell kinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936515:5,891,873...5,952,400
Ensembl chrNW_004936515:5,891,828...5,952,458 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,088,815...15,131,048
Ensembl chrNW_004936474:15,088,816...15,118,310 		JBrowse link
G Lat linker for activation of T cells involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,759,245...11,764,693
Ensembl chrNW_004936501:11,760,840...11,764,397 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in ISO (PMID:8943371) UniProt PMID:8943371 NCBI chrNW_004936474:15,293,115...15,314,072
Ensembl chrNW_004936474:15,305,050...15,313,668 		JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:4,522,158...4,565,505
Ensembl chrNW_004936609:4,522,385...4,563,765 		JBrowse link
G Lime1 Lck interacting transmembrane adaptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936514:10,980,136...10,983,323 JBrowse link
G LOC101956536 C-type lectin domain family 2 member A acts_upstream_of_or_within ISO (PMID:16143319) MGI PMID:16143319 NCBI chrNW_004936902:583,850...586,981 JBrowse link
G LOC101956706 selection and upkeep of intraepithelial T-cells protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:28,907,505...28,959,101 JBrowse link
G LOC101957293 selection and upkeep of intraepithelial T-cells protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:28,976,725...28,987,816 JBrowse link
G LOC101960905 butyrophilin subfamily 2 member A2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936671:2,149,443...2,157,518
Ensembl chrNW_004936671:2,149,361...2,157,536 		JBrowse link
G LOC101963197 HLA class II histocompatibility antigen, DP beta 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,730,800...25,741,089
Ensembl chrNW_004936476:25,730,596...25,741,145 		JBrowse link
G LOC101971454 butyrophilin-like protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:610,676...617,206 JBrowse link
G LOC101971458 tyrosine-protein kinase ZAP-70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9208839) Ensembl
MGI		 PMID:9208839 GO_REF:0000107 NCBI chrNW_004936744:1,000,105...1,012,712
Ensembl chrNW_004936744:1,000,105...1,012,433 		JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9064344) Ensembl
MGI		 PMID:9064344 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Mog myelin oligodendrocyte glycoprotein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936723:1,070,071...1,112,487
Ensembl chrNW_004936723:1,070,117...1,081,323 		JBrowse link
G Nfkbid NFKB inhibitor delta involved_in ISO (MGI:6142401|PMID:25282160) UniProt PMID:25282160 MGI:6142401 NCBI chrNW_004936570:464,513...471,333
Ensembl chrNW_004936570:463,974...471,344 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (PMID:21444916) MGI PMID:21444916 NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590 		JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:5,152,491...5,666,728
Ensembl chrNW_004936591:5,152,441...5,573,129 		JBrowse link
G Pde4d phosphodiesterase 4D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:8,123,437...9,235,586
Ensembl chrNW_004936480:8,204,701...9,234,865 		JBrowse link
G Plcg1 phospholipase C gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728238) Ensembl
MGI		 PMID:15728238 GO_REF:0000107 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728238) Ensembl
MGI		 PMID:15728238 GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Pram1 PML-RARA regulated adaptor molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:5,284,001...5,294,900
Ensembl chrNW_004936588:5,284,621...5,292,520 		JBrowse link
G Prkd2 protein kinase D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:524,532...551,451
Ensembl chrNW_004936664:522,910...551,469 		JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17698590) Ensembl
MGI		 PMID:17698590 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:17698590) MGI PMID:17698590 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14752163) Ensembl
MGI
TreeGrafter		 PMID:14752163 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:2,180,804...2,232,869
Ensembl chrNW_004936690:2,181,047...2,232,958 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9064344) Ensembl
MGI		 PMID:9064344 GO_REF:0000107 NCBI chrNW_004936709:864,206...884,630
Ensembl chrNW_004936709:864,197...884,610 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258 		JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:18,057,569...18,071,787
Ensembl chrNW_004936485:18,057,534...18,071,816 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859 		JBrowse link
G Rftn1 raftlin, lipid raft linker 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:9,119,234...9,317,696
Ensembl chrNW_004936473:9,117,247...9,317,704 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Rnf31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:385,972...397,718
Ensembl chrNW_004936722:385,971...398,030 		JBrowse link
G Shb SH2 domain containing adaptor protein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24645804) Ensembl
MGI		 PMID:24645804 GO_REF:0000107 NCBI chrNW_004936524:5,698,101...5,832,801
Ensembl chrNW_004936524:5,701,566...5,834,539 		JBrowse link
G Skap1 src kinase associated phosphoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,885,443...13,213,409
Ensembl chrNW_004936490:12,934,351...13,213,465 		JBrowse link
G Slc39a6 solute carrier family 39 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:9,166,989...9,188,114
Ensembl chrNW_004936517:9,167,334...9,189,345 		JBrowse link
G Spn sialophorin involved_in ISO PMID:12496963 ARUK-UCL PMID:12496963 RGD:1358565 NCBI chrNW_004936501:12,773,967...12,776,642 JBrowse link
G Sppl3 signal peptide peptidase like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:193,753...229,859
Ensembl chrNW_004936668:193,723...231,088 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21487392) Ensembl
MGI		 PMID:21487392 GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654 		JBrowse link
G Stoml2 stomatin like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18641330) Ensembl
UniProt		 PMID:18641330 GO_REF:0000107 NCBI chrNW_004936524:3,129,149...3,132,405
Ensembl chrNW_004936524:3,129,148...3,133,056 		JBrowse link
G Tec tec protein tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:14,248,277...14,341,329
Ensembl chrNW_004936482:14,248,233...14,341,402 		JBrowse link
G Themis thymocyte selection associated involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936639:1,739,380...1,915,545
Ensembl chrNW_004936639:1,739,380...1,915,560 		JBrowse link
G Themis2 thymocyte selection associated family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22732588) Ensembl
MGI
TreeGrafter		 PMID:22732588 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:12,104,430...12,120,064
Ensembl chrNW_004936474:12,104,430...12,119,479 		JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936542:4,323,905...4,329,940
Ensembl chrNW_004936542:4,323,408...4,330,077 		JBrowse link
G Tnfrsf21 TNF receptor superfamily member 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:13,125,269...13,194,205
Ensembl chrNW_004936476:13,125,042...13,194,232 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Txk TXK tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:14,190,409...14,231,690
Ensembl chrNW_004936482:14,190,409...14,245,943 		JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:15125833) UniProt PMID:15125833
G Vtcn1 V-set domain containing T cell activation inhibitor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936627:2,303,972...2,366,366
Ensembl chrNW_004936627:2,303,845...2,366,466 		JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:933,637...1,069,885
Ensembl chrNW_004936606:934,337...1,067,275 		JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528 		JBrowse link
G Znf683 zinc finger protein 683 involved_in ISO (PMID:26179882) UniProt PMID:26179882 NCBI chrNW_004936474:10,851,249...10,859,092 JBrowse link
TIRAP-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tirap TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549626) Ensembl
MGI		 PMID:10549626 GO_REF:0000107 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15220916) Ensembl
MGI		 PMID:15220916 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11894098) MGI
Ensembl		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G Tlr2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:20,810,188...20,841,537
Ensembl chrNW_004936477:20,834,849...20,841,535 		JBrowse link
toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule involved_in ISO (MGI:5645190|PMID:25158758) UniProt PMID:25158758 MGI:5645190 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Colec12 collectin subfamily member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:169,084...350,209
Ensembl chrNW_004936550:169,084...350,501 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Lgals9 galectin 9 involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G LOC120891307 2'-5'-oligoadenylate synthase 1-like involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936668:2,917,900...2,925,397 JBrowse link
G Rftn1 raftlin, lipid raft linker 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21266579) MGI
Ensembl		 PMID:21266579 GO_REF:0000107 NCBI chrNW_004936473:9,119,234...9,317,696
Ensembl chrNW_004936473:9,117,247...9,317,704 		JBrowse link
G Scara3 scavenger receptor class A member 3 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004936675:541,829...561,110
Ensembl chrNW_004936675:535,210...561,119 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tlr3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:20,810,188...20,841,537
Ensembl chrNW_004936477:20,834,849...20,841,535 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143 		JBrowse link
toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:9,572,392...9,575,771
Ensembl chrNW_004936531:9,571,796...9,575,923 		JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:33,933...78,990
Ensembl chrNW_004936636:33,673...79,194 		JBrowse link
G Ecsit ECSIT signaling integrator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,550,192...1,563,534
Ensembl chrNW_004936659:1,549,581...1,563,574 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004936472:25,236,728...25,246,585
Ensembl chrNW_004936472:25,236,728...25,246,580 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 acts_upstream_of_or_within ISO (PMID:10549626) MGI PMID:10549626 NCBI chrNW_004936809:891,407...900,311
Ensembl chrNW_004936809:890,717...900,326 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,073,910...3,129,344
Ensembl chrNW_004936602:3,073,889...3,129,408 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004936538:4,034,467...4,050,240 JBrowse link
G LOC120891307 2'-5'-oligoadenylate synthase 1-like involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936668:2,917,900...2,925,397 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,578,598...2,698,165
Ensembl chrNW_004936496:2,637,958...2,700,055 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29624734) Ensembl
MGI		 PMID:29624734 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI
TreeGrafter		 PMID:18261938 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936494:9,537,793...9,541,187
Ensembl chrNW_004936494:9,537,008...9,541,612 		JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,194,237...26,215,244
Ensembl chrNW_004936469:26,194,192...26,214,949 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11894098) Ensembl
MGI		 PMID:11894098 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532 		JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:3,414,315...3,416,335
Ensembl chrNW_004936580:3,414,296...3,416,393 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:2,763,755...2,809,229
Ensembl chrNW_004936545:2,763,596...2,809,709 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25549946) Ensembl
MGI
TreeGrafter		 PMID:25549946 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tmem126a transmembrane protein 126A acts_upstream_of_or_within ISO (PMID:25549946) MGI PMID:25549946 NCBI chrNW_004936498:13,538,565...13,545,338 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249
G Traf3 TNF receptor associated factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936835:844,747...955,900
Ensembl chrNW_004936835:844,727...950,664 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Tril TLR4 interactor with leucine rich repeats involved_in ISO (PMID:19710467) UniProt PMID:19710467 NCBI chrNW_004936478:5,453,532...5,459,071 JBrowse link
toll-like receptor 5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tirap TIR domain containing adaptor protein NOT|involved_in ISO (MGI:3531416|PMID:12447442) BHF-UCL PMID:12447442 MGI:3531416 NCBI chrNW_004936572:5,926,193...5,938,621
Ensembl chrNW_004936572:5,924,158...5,938,658 		JBrowse link
G Tlr5 toll like receptor 5 involved_in ISO (PMID:17128265) BHF-UCL PMID:17128265 NCBI chrNW_004936526:383,490...387,007
Ensembl chrNW_004936526:383,418...401,552 		JBrowse link
toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143 		JBrowse link
toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372 		JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:2,638,020...2,642,201
Ensembl chrNW_004936470:2,638,014...2,641,133 		JBrowse link
toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:29130391) UniProt
Ensembl		 PMID:29130391 GO_REF:0000107 NCBI chrNW_004936517:841,402...941,054
Ensembl chrNW_004936517:841,411...939,581 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004936515:6,001,324...6,015,407 JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:13,315,265...13,365,186
Ensembl chrNW_004936492:13,315,265...13,374,034 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,822,100...2,935,252
Ensembl chrNW_004936636:2,821,939...2,938,082 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004936477:20,810,188...20,841,537
Ensembl chrNW_004936477:20,834,849...20,841,535 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143 		JBrowse link
toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20847273) Ensembl
MGI		 PMID:20847273 GO_REF:0000107 NCBI chrNW_004936549:5,964,240...6,205,245
Ensembl chrNW_004936549:5,965,143...6,204,379 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30990796) Ensembl
MGI		 PMID:30990796 GO_REF:0000107 NCBI chrNW_004936599:3,642,504...3,649,294
Ensembl chrNW_004936599:3,642,504...3,648,417 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:27832756 RGD:34888235 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806 		JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19679103) Ensembl
MGI		 PMID:19679103 GO_REF:0000107 NCBI chrNW_004936611:2,628,389...2,637,810
Ensembl chrNW_004936611:2,628,471...2,637,810 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (PMID:14607928) ComplexPortal PMID:14607928 NCBI chrNW_004936648:2,653,252...2,671,453 JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936557:5,867,182...5,911,207
Ensembl chrNW_004936557:5,867,211...5,911,213 		JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:2,130,421...2,159,859
Ensembl chrNW_004936529:2,130,252...2,160,313 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:29,248,533...29,377,335
Ensembl chrNW_004936475:29,248,516...29,377,206 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:3,897,878...4,005,664
Ensembl chrNW_004936624:3,897,791...4,000,558 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Tifab TIFA inhibitor acts_upstream_of_negative_effect ISO (PMID:26458771) MGI PMID:26458771 NCBI chrNW_004936597:2,620,661...2,621,302 JBrowse link
G Tlr1 toll like receptor 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1643119 NCBI chrNW_004936482:6,582,430...6,591,128
Ensembl chrNW_004936482:6,582,584...6,584,971 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:16973131 PMID:18353287 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:1643119 RGD:5684896 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1643119 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 RGD:1643119 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tlr5 toll like receptor 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936526:383,490...387,007
Ensembl chrNW_004936526:383,418...401,552 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO
IEA		 RGD
TreeGrafter
InterPro		 PMID:16973131 PMID:18353287 GO_REF:0000002 GO_REF:0000118 RGD:1643119 RGD:5684896 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675 		JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:2,638,020...2,642,201
Ensembl chrNW_004936470:2,638,014...2,641,133 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936835:844,747...955,900
Ensembl chrNW_004936835:844,727...950,664 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16415873) InterPro
MGI
Ensembl		 PMID:16415873 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936599:2,109,292...2,146,006
Ensembl chrNW_004936599:2,109,292...2,117,143 		JBrowse link
toll-like receptor TLR1:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,575,255...2,585,969
Ensembl chrNW_004936677:2,579,010...2,586,002 		JBrowse link
toll-like receptor TLR6:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788 		JBrowse link
G Tlr6 toll like receptor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
TRAM-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkce protein kinase C epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936508:6,018,374...6,495,216
Ensembl chrNW_004936508:6,017,551...6,494,427 		JBrowse link
G Rab11fip2 RAB11 family interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:7,692,577...7,729,736
Ensembl chrNW_004936486:7,691,752...7,729,742 		JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
TRIF-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:132,870...145,288
Ensembl chrNW_004936539:132,868...143,602 		JBrowse link
G Cd40 CD40 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,477,750...3,482,489
Ensembl chrNW_004936664:3,475,543...3,481,533 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:25636800)
(MGI:3718934|PMID:17658277)		 CACAO
ParkinsonsUK-UCL		 PMID:17658277 PMID:25636800 MGI:3718934 NCBI chrNW_004936588:2,818,909...2,827,797 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936742:743,191...745,332
Ensembl chrNW_004936742:744,570...745,277 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:4438693|PMID:20037584) ARUK-UCL PMID:20037584 MGI:4438693 NCBI chrNW_004936482:6,607,723...6,610,161
Ensembl chrNW_004936482:6,607,753...6,610,143 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    immune system process 2209
      activation of immune response 488
        immune response-activating signaling pathway 431
          immune response-activating cell surface receptor signaling pathway + 263
          innate immune response-activating signaling pathway + 249
Path 2
Term Annotations click to browse term
  biological_process 15969
    biological regulation 11154
      regulation of biological process 10818
        positive regulation of biological process 6088
          positive regulation of response to stimulus 2252
            positive regulation of immune response 666
              activation of immune response 488
                immune response-activating signaling pathway 431
                  immune response-activating cell surface receptor signaling pathway + 263
                  innate immune response-activating signaling pathway + 249
paths to the root