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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of germinal center formation
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Accession:GO:0002634 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of germinal center formation.



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regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3795835|PMID:18438409)
UniProt
RGD
PMID:18438409 GO_REF:0000024 MGI:3795835 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Pkn1 protein kinase N1 acts_upstream_of_or_within ISO MGI:5475202 (MGI:5467878|PMID:23223530) RGD PMID:23223530 MGI:5467878 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:3580753|PMID:15917799), (MGI:3838060|PMID:19217324) RGD PMID:15917799 PMID:19217324 MGI:3580753 MGI:3838060 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:4946158|PMID:21088135) RGD PMID:21088135 MGI:4946158 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
negative regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO (MGI:3589323|PMID:16002694) RGD PMID:16002694 MGI:3589323 NCBI chr10:101,566,299...101,570,249
Ensembl chr10:101,566,304...101,570,237
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) RGD PMID:18172933 MGI:5284769 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
positive regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2683027 (MGI:3619310|PMID:14607964) RGD PMID:14607964 MGI:3619310 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G LOC100909593 class II histocompatibility antigen, M alpha chain-like involved_in ISO (MGI:2153656|PMID:11714799) RGD PMID:11714799 MGI:2153656
G RT1-DMa RT1 class II, locus DMa involved_in ISO (MGI:2153656|PMID:11714799) RGD PMID:11714799 MGI:2153656 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO MGI:2389403 (MGI:3036943|PMID:14557413) RGD PMID:14557413 MGI:3036943 NCBI chr 7:113,736,046...113,738,523
Ensembl chr 7:113,736,055...113,738,517
JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within ISO MGI:3038886 (MGI:3037416|PMID:14988498) RGD PMID:14988498 MGI:3037416 NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO MGI:2387426 (MGI:3036943|PMID:14557413) RGD PMID:14557413 MGI:3036943 NCBI chr16:79,462,406...79,492,888
Ensembl chr16:79,462,402...79,492,693
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure morphogenesis 2925
        regulation of anatomical structure morphogenesis 1016
          regulation of germinal center formation 11
            negative regulation of germinal center formation 2
            positive regulation of germinal center formation 6
Path 2
Term Annotations click to browse term
  biological_process 19834
    biological regulation 13775
      regulation of biological process 13033
        regulation of response to stimulus 4088
          regulation of immune response 941
            regulation of adaptive immune response 209
              regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains 196
                regulation of germinal center formation 11
                  negative regulation of germinal center formation 2
                  positive regulation of germinal center formation 6
paths to the root