Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of germinal center formation
go back to main search page
Accession:GO:0002634 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of germinal center formation.


show annotations for term's descendants           Sort by:
regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:3795835|PMID:18438409)		 UniProt
RGD		 PMID:18438409 GO_REF:0000024 MGI:3795835 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Pkn1 protein kinase N1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5475202 (MGI:5467878|PMID:23223530)
GO_REF:0000107		 RGD
Ensembl		 PMID:23223530 GO_REF:0000107 MGI:5467878 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:3580753|PMID:15917799), (MGI:3838060|PMID:19217324) RGD PMID:15917799 PMID:19217324 MGI:3580753 MGI:3838060 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:4946158|PMID:21088135) RGD PMID:21088135 MGI:4946158 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
negative regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO
IEA		 (MGI:3589323|PMID:16002694)
GO_REF:0000107		 RGD
Ensembl		 PMID:16002694 GO_REF:0000107 MGI:3589323 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) RGD PMID:18172933 MGI:5284769 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
positive regulation of germinal center formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857117|MGI:2683027 (MGI:3619310|PMID:14607964)
GO_REF:0000107		 RGD
Ensembl		 PMID:14607964 GO_REF:0000107 MGI:3619310 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G RT1-DMa RT1 class II, locus DMa involved_in ISO (MGI:2153656|PMID:11714799) RGD PMID:11714799 MGI:2153656 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C acts_upstream_of_or_within ISO MGI:2389403 (MGI:3036943|PMID:14557413) RGD PMID:14557413 MGI:3036943 NCBI chr 7:113,736,046...113,738,523
Ensembl chr 7:113,736,055...113,738,517 		JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within ISO MGI:3038886 (MGI:3037416|PMID:14988498) RGD PMID:14988498 MGI:3037416 NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042 		JBrowse link
G Tnfsf13b TNF superfamily member 13b acts_upstream_of_or_within ISO MGI:2387426 (MGI:3036943|PMID:14557413) RGD PMID:14557413 MGI:3036943 NCBI chr16:79,462,406...79,492,888
Ensembl chr16:79,462,402...79,492,693 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19572
    developmental process 6914
      anatomical structure morphogenesis 2955
        regulation of anatomical structure morphogenesis 1024
          regulation of germinal center formation 10
            negative regulation of germinal center formation 2
            positive regulation of germinal center formation 5
Path 2
Term Annotations click to browse term
  biological_process 19572
    biological regulation 13202
      regulation of biological process 12828
        regulation of response to stimulus 4119
          regulation of immune response 947
            regulation of adaptive immune response 233
              regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains 220
                regulation of germinal center formation 10
                  negative regulation of germinal center formation 2
                  positive regulation of germinal center formation 5
paths to the root