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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of antigen processing and presentation
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Accession:GO:0002577 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of antigen processing and presentation.



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regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 NOT|involved_in ISO (MGI:5562517|PMID:23871208) RGD PMID:23871208 MGI:5562517 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (MGI:6281071|PMID:30728504) RGD PMID:30728504 MGI:6281071 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein-like involved_in ISO (PMID:23401559) RGD PMID:23401559 NCBI chr 4:158,021,454...158,028,905 JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-DOa RT1 class II, locus DOa involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667
JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule involved_in ISO (MGI:5285055|PMID:21572087) RGD PMID:21572087 MGI:5285055 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
JBrowse link
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (PMID:29341118) RGD PMID:29341118 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
JBrowse link
G Mir155hg Mir155 host gene involved_in ISO (PMID:32671205) RGD PMID:32671205 NCBI chr11:23,773,468...23,775,697 JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen-like 2 acts_upstream_of_or_within ISO MGI:3582343 (PMID:29341118) RGD PMID:29341118 NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
JBrowse link
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Bb RT1 class II, locus Bb involved_in ISO (MGI:4942246|PMID:14607905) RGD PMID:14607905 MGI:4942246 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member IMP RGD PMID:1758495 RGD:1299069 NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycard PYD and CARD domain containing involved_in ISO (MGI:5291858|PMID:21892172) RGD PMID:21892172 MGI:5291858 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:11602640) RGD PMID:11602640 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 involved_in ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
JBrowse link
G Cd74 CD74 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:4943392|PMID:18003616)
BHF-UCL
RGD
PMID:18003616 GO_REF:0000024 MGI:4943392 NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 involved_in ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr19:18,382,369...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:18984740)
Ensembl
RGD
PMID:18984740 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:22804504) RGD PMID:22804504 NCBI chr  X:14,405,105...14,413,850
Ensembl chr  X:14,405,124...14,413,849
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    immune system process 2843
      regulation of immune system process 1663
        regulation of antigen processing and presentation 22
          negative regulation of antigen processing and presentation + 8
          positive regulation of antigen processing and presentation + 11
          regulation of B cell antigen processing and presentation + 0
          regulation of T cell antigen processing and presentation + 1
          regulation of antigen processing and presentation of peptide antigen + 7
          regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II + 5
          regulation of antigen processing and presentation via MHC class Ib + 0
          regulation of dendritic cell antigen processing and presentation + 11
          regulation of macrophage antigen processing and presentation + 1
          regulation of monocyte antigen processing and presentation + 0
          regulation of non-professional antigen presenting cell antigen processing and presentation + 0
Path 2
Term Annotations click to browse term
  biological_process 19872
    biological regulation 13396
      regulation of biological process 12998
        regulation of immune system process 1663
          regulation of antigen processing and presentation 22
            negative regulation of antigen processing and presentation + 8
            positive regulation of antigen processing and presentation + 11
            regulation of B cell antigen processing and presentation + 0
            regulation of T cell antigen processing and presentation + 1
            regulation of antigen processing and presentation of peptide antigen + 7
            regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II + 5
            regulation of antigen processing and presentation via MHC class Ib + 0
            regulation of dendritic cell antigen processing and presentation + 11
            regulation of macrophage antigen processing and presentation + 1
            regulation of monocyte antigen processing and presentation + 0
            regulation of non-professional antigen presenting cell antigen processing and presentation + 0
paths to the root