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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of antigen processing and presentation
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Accession:GO:0002577 term browser browse the term
Definition:Any process that modulates the frequency, rate, or extent of antigen processing and presentation.

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regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 NOT ISO (MGI:5562517|PMID:23871208) RGD PMID:23871208 MGI:5562517 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348 		JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 ISO (MGI:6281071|PMID:30728504) RGD PMID:30728504 MGI:6281071 NCBI chr 3:176,415,911...176,431,423
Ensembl chr 3:176,415,914...176,431,423 		JBrowse link
negative regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lilrb2 leukocyte immunoglobulin like receptor B2 involved_in ISO (PMID:19124746) RGD PMID:19124746 NCBI chr 1:63,734,135...63,741,986
Ensembl chr 1:63,734,135...63,741,982 		JBrowse link
negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in ISO UniProtKB:P04439 (PMID:24643698) RGD PMID:24643698 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985 		JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbpl TAP binding protein-like involved_in ISO (PMID:23401559) RGD PMID:23401559 NCBI chr 4:157,735,748...157,743,199
Ensembl chr 4:157,735,748...157,743,199 		JBrowse link
negative regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-DOa RT1 class II, locus DOa involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:3,889,106...3,892,360
Ensembl chr20:3,889,370...3,892,449 		JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in ISO (PMID:22733780) RGD PMID:22733780 NCBI chr20:4,020,273...4,026,398
Ensembl chr20:4,020,317...4,026,346 		JBrowse link
negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466 		JBrowse link
negative regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule ISO (MGI:5285055|PMID:21572087) RGD PMID:21572087 MGI:5285055 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640 		JBrowse link
G Fgl2 fibrinogen-like 2 ISO MGI:3582343 (MGI:6188369|PMID:29341118) RGD PMID:29341118 MGI:6188369 NCBI chr 4:10,323,598...10,329,241
Ensembl chr 4:10,323,607...10,329,241 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:16882710) RGD PMID:16882710 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466 		JBrowse link
negative regulation of macrophage antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgl2 fibrinogen-like 2 ISO MGI:3582343 (MGI:6188369|PMID:29341118) RGD PMID:29341118 MGI:6188369 NCBI chr 4:10,323,598...10,329,241
Ensembl chr 4:10,323,607...10,329,241 		JBrowse link
negative regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985 		JBrowse link
positive regulation of antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-Bb RT1 class II, locus Bb involved_in IEA
ISO		 GO_REF:0000107
(MGI:4942246|PMID:14607905)		 Ensembl
RGD		 PMID:14607905 GO_REF:0000107 MGI:4942246 NCBI chr20:4,043,726...4,049,367
Ensembl chr20:4,039,413...4,049,711 		JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap2 transporter 2, ATP binding cassette subfamily B member IMP RGD PMID:1758495 RGD:1299069 NCBI chr20:3,995,544...4,009,587
Ensembl chr20:3,995,544...4,009,587 		JBrowse link
positive regulation of antigen processing and presentation of peptide antigen via MHC class II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pycard PYD and CARD domain containing ISO (MGI:5291858|PMID:21892172) RGD PMID:21892172 MGI:5291858 NCBI chr 1:199,438,029...199,439,062
Ensembl chr 1:199,437,832...199,439,210 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:11602640) RGD PMID:11602640 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013 		JBrowse link
positive regulation of dendritic cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl19 C-C motif chemokine ligand 19 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782 		JBrowse link
G Ccr7 C-C motif chemokine receptor 7 ISO (MGI:3576832|PMID:15845453) RGD PMID:15845453 MGI:3576832 NCBI chr10:87,057,335...87,067,444
Ensembl chr10:87,057,136...87,067,456 		JBrowse link
G Cd74 CD74 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:4943392|PMID:18003616)		 BHF-UCL
RGD		 PMID:18003616 GO_REF:0000024 MGI:4943392 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr 4:85,123,965...85,175,206
Ensembl chr 4:85,123,960...85,174,951 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 ISO (MGI:4442557|PMID:20008287) RGD PMID:20008287 MGI:4442557 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3839054|PMID:18984740)		 Ensembl
RGD		 PMID:18984740 GO_REF:0000107 MGI:3839054 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706 		JBrowse link
regulation of T cell antigen processing and presentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:22804504) RGD PMID:22804504 NCBI chr  X:15,155,246...15,164,099
Ensembl chr  X:15,155,230...15,164,105 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20078
    immune system process 2843
      regulation of immune system process 1467
        regulation of antigen processing and presentation 22
          negative regulation of antigen processing and presentation + 8
          positive regulation of antigen processing and presentation + 11
          regulation of B cell antigen processing and presentation + 0
          regulation of T cell antigen processing and presentation + 2
          regulation of antigen processing and presentation of peptide antigen + 7
          regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II + 5
          regulation of antigen processing and presentation via MHC class Ib + 0
          regulation of dendritic cell antigen processing and presentation + 10
          regulation of macrophage antigen processing and presentation + 1
          regulation of monocyte antigen processing and presentation + 0
          regulation of non-professional antigen presenting cell antigen processing and presentation + 0
Path 2
Term Annotations click to browse term
  biological_process 20078
    biological regulation 13898
      regulation of biological process 13140
        regulation of immune system process 1467
          regulation of antigen processing and presentation 22
            negative regulation of antigen processing and presentation + 8
            positive regulation of antigen processing and presentation + 11
            regulation of B cell antigen processing and presentation + 0
            regulation of T cell antigen processing and presentation + 2
            regulation of antigen processing and presentation of peptide antigen + 7
            regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II + 5
            regulation of antigen processing and presentation via MHC class Ib + 0
            regulation of dendritic cell antigen processing and presentation + 10
            regulation of macrophage antigen processing and presentation + 1
            regulation of monocyte antigen processing and presentation + 0
            regulation of non-professional antigen presenting cell antigen processing and presentation + 0
paths to the root