Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:histamine secretion by mast cell
go back to main search page
Accession:GO:0002553 term browser browse the term
Definition:The regulated release of histamine by a mast cell or group of mast cells.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
histamine secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTK Bruton tyrosine kinase ISO RGD PMID:12220673 RGD:1600535 NCBI chr  X:89,690,569...89,727,420 JBrowse link
G LOC103224223 adenosine receptor A3 acts_upstream_of_or_within ISO (PMID:12817016) MGI PMID:12817016 NCBI chr20:22,043,367...22,127,103
Ensembl chr20:22,106,190...22,123,629 		JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:16177098 RGD:1578516 NCBI chr 8:51,919,656...52,057,376
Ensembl chr 8:51,919,808...52,057,959 		JBrowse link
G RAB44 RAB44, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:32238914) MGI PMID:32238914 NCBI chr17:35,399,866...35,435,599 JBrowse link
G SLC18A2 solute carrier family 18 member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:110,039,783...110,078,822
Ensembl chr 9:110,040,391...110,076,647 		JBrowse link
G SNAP23 synaptosome associated protein 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:40,443,478...40,485,211
Ensembl chr26:40,442,615...40,482,346 		JBrowse link
G YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta ISO RGD PMID:12499633 RGD:1625716 NCBI chr 8:95,786,197...95,821,270
Ensembl chr 8:95,788,305...95,819,197 		JBrowse link
positive regulation of histamine secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPA natriuretic peptide A involved_in ISO PMID:9663691 UniProt PMID:9663691 RGD:13461752 NCBI chr20:119,942,412...119,946,211
Ensembl chr20:119,944,532...119,945,917 		JBrowse link
G PLA2G3 phospholipase A2 group III involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,025,373...14,033,214
Ensembl chr19:14,025,742...14,030,643 		JBrowse link
G SNX4 sorting nexin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:55,311,896...55,389,174
Ensembl chr22:55,311,933...55,389,349 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:129,937,026...129,984,071
Ensembl chr  X:129,937,046...129,984,119 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:21,575,057...21,580,054
Ensembl chr14:21,575,161...21,579,820 		JBrowse link
regulation of histamine secretion by mast cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNX6 sorting nexin 6 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chr24:11,389,436...11,433,126
Ensembl chr24:11,388,329...11,433,545 		JBrowse link
G VAMP2 vesicle associated membrane protein 2 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chr16:7,539,098...7,542,466 JBrowse link
G VAMP3 vesicle associated membrane protein 3 NOT|involved_in ISO (PMID:18253931) UniProt PMID:18253931 NCBI chr20:123,973,672...123,984,230
Ensembl chr20:123,971,992...123,984,187 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17043
    cellular process 16562
      exocytic process 96
        histamine secretion by mast cell 15
          negative regulation of histamine secretion by mast cell 0
          positive regulation of histamine secretion by mast cell 5
          regulation of histamine secretion by mast cell + 8
Path 2
Term Annotations click to browse term
  biological_process 17043
    localization 5425
      establishment of localization 4707
        transport 4401
          secretion 1175
            secretion by cell 1008
              exocytosis 386
                regulated exocytosis 270
                  leukocyte degranulation 91
                    mast cell degranulation 60
                      histamine secretion by mast cell 15
                        negative regulation of histamine secretion by mast cell 0
                        positive regulation of histamine secretion by mast cell 5
                        regulation of histamine secretion by mast cell + 8
paths to the root