ONTOLOGY REPORT - ANNOTATIONS
Term: antigen processing and presentation via MHC class Ib
Accession: GO:0002475
browse the term
Definition: The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.
G
AABR07000137.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:1,307,185...1,308,310
G
AABR07000147.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
AABR07001348.1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
Ensembl chr 1:39,668,472...39,670,153
G
AABR07044308.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:1,789,779...1,793,115
G
AABR07044308.2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:1,768,641...1,772,357
G
AABR07044362.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:2,630,622...2,634,751
G
AABR07044383.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:3,403,777...3,436,874
G
AABR07044397.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:2,496,605...2,497,428
G
AC120486.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
G
ENSRNOG00000064836
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:2,606,621...2,618,153
G
ENSRNOG00000069480
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr20:3,310,825...3,421,372
G
H2-M10.6l
histocompatibility 2, M region locus 10.6 like
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:1,958,270...1,965,247
Ensembl chr20:1,925,049...1,966,105
G
H60al
histocompatibility 60a like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,382,896...1,386,846
G
Hfe
homeostatic iron regulator
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
G
Micb
MHC class I polypeptide-related sequence B
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:78,495,779...78,513,030
Ensembl chr 1:78,495,779...78,512,827
G
Mill1
MHC I like leukocyte 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:78,372,798...78,398,932
Ensembl chr 1:78,372,802...78,398,930
G
Mr1
major histocompatibility complex, class I-related
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr13:67,298,362...67,317,985
Ensembl chr13:67,299,585...67,317,970
G
Raet1l
retinoic acid early transcript 1L
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:1,979,433...1,984,410
Ensembl chr 1:1,979,443...1,984,410
G
RT1-A
RT1 class I, locus A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-A1
RT1 class Ia, locus A1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:4,905,309...4,914,593
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO IBA
(PMID:9754572) GO_REF:0000033
RGD GO_Central
PMID:9754572
GO_REF:0000033
NCBI chr20:4,870,939...4,910,183
G
RT1-CE1
RT1 class I, locus1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
G
RT1-CE11
RT1 class I, locus CE11
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,355,393...3,358,520
Ensembl chr20:3,350,937...3,380,362
G
RT1-CE14
RT1 class I, locus CE14
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:3,296,654...3,300,795
Ensembl chr20:3,297,196...3,305,134
G
RT1-CE16
RT1 class I, locus CE16
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563
G
RT1-CE2
RT1 class I, locus CE2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790
G
RT1-CE3
RT1 class I, locus CE3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO IBA
(PMID:28636952) GO_REF:0000033
RGD GO_Central
PMID:28636952
GO_REF:0000033
NCBI chr20:3,403,418...3,479,476
G
RT1-CE7
RT1 class I, locus CE7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:3,434,205...3,437,152
G
RT1-M1-2
RT1 class I, locus M1, gene 2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:1,909,506...1,913,423
Ensembl chr20:1,910,656...1,917,936
G
RT1-M1-4
RT1 class I, locus M1, gene 4
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:1,891,365...1,893,585
Ensembl chr20:1,889,164...1,893,815
G
RT1-M1-5
RT1 class I, M1, gene 5
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:1,858,608...1,860,708
Ensembl chr20:1,811,604...1,860,708
G
RT1-M10-1
RT1 class I, locus M10, gene 1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:1,986,817...1,988,908
Ensembl chr20:1,986,788...2,020,117
G
RT1-M2
RT1 class Ib, locus M2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:978,918...981,510
Ensembl chr20:978,935...981,723
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:7584149), (PMID:8805247) (PMID:8464890) GO_REF:0000033
RGD GO_Central
PMID:7584149 PMID:8464890 PMID:8805247
GO_REF:0000033
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
G
RT1-M5
RT1 class Ib, locus M5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,546,496...1,548,948
Ensembl chr20:1,546,511...1,548,775
G
RT1-M6-2
RT1 class I, locus M6, gene 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:1,583,267...1,587,099
Ensembl chr20:1,583,299...1,586,215
G
RT1-N1
RT1 class Ib, locus N1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
G
RT1-N2
RT1 class Ib, locus N2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,641,157...2,645,439
Ensembl chr20:2,641,202...2,644,900
G
RT1-N3
RT1 class Ib, locus N3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,659,132...2,665,536
Ensembl chr20:2,661,584...2,665,530
G
RT1-O1
RT1 class Ib, locus O1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:2,655,116...2,657,520
Ensembl chr20:2,655,116...2,657,520
G
RT1-O1l1
RT1 class Ib, locus O1 like 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr20:2,624,073...2,658,023
Ensembl chr20:2,623,953...2,692,081
G
RT1-S2
RT1 class Ib, locus S2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
G
RT1-S3
RT1 class Ib, locus S3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
G
RT1-T24-1
RT1 class I, locus T24, gene 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,761,495...2,774,871
Ensembl chr20:2,718,279...2,776,154
G
RT1-T24-3
RT1 class I, locus T24, gene 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,718,210...2,730,604
Ensembl chr20:2,718,279...2,776,154
G
RT1-T24-4
RT1 class I, locus T24, gene 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:2,684,515...2,747,878
Ensembl chr20:2,684,515...2,692,511
G
RT1-A2
RT1 class Ia, locus A2
acts_upstream_of_or_within
ISO
(PMID:1538753)
RGD
PMID:1538753
NCBI chr20:4,870,939...4,910,183
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:1538751) (PMID:1538753) GO_REF:0000107
RGD Ensembl
PMID:1538751 PMID:1538753
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
G
RT1-A2
RT1 class Ia, locus A2
involved_in
ISO
(PMID:20195504), (PMID:30087334)
RGD
PMID:20195504 PMID:30087334
NCBI chr20:4,870,939...4,910,183
G
RT1-CE5
RT1 class I, locus CE5
involved_in
ISO
(PMID:23851683)
RGD
PMID:23851683
NCBI chr20:3,403,418...3,479,476
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
acts_upstream_of_or_within
ISO
(PMID:16461341)
RGD
PMID:16461341
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
G
B2m
beta-2 microglobulin
acts_upstream_of_or_within
ISO
(PMID:16299293)
RGD
PMID:16299293
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
acts_upstream_of_or_within
ISO
(PMID:16299293)
RGD
PMID:16299293
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
G
Tap2
transporter 2, ATP binding cassette subfamily B member
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16299293)
Ensembl RGD
PMID:16299293
GO_REF:0000107
NCBI chr20:4,636,347...4,650,387
Ensembl chr20:4,636,357...4,650,407
G
Cd1d1
CD1d1 molecule
involved_in
ISO IBA IEA
(PMID:10523605) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:10523605
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
G
Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:1856989 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
G
Ap3d1
adaptor related protein complex 3 subunit delta 1
acts_upstream_of_or_within
ISO
MGI:1856083 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
G
Cd1d1
CD1d1 molecule
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000118 GO_REF:0000033 (PMID:14557411)
TreeGrafter GO_Central RGD
PMID:14557411
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
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