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ONTOLOGY REPORT - ANNOTATIONS

Term:MHC protein complex assembly
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Accession:GO:0002396 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form an MHC protein complex.


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MHC class I protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein IEP RGD PMID:12407112 RGD:633939 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
MHC class Ib protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tapbp TAP binding protein involved_in ISO (PMID:12582157) RGD PMID:12582157 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
MHC class II protein complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RT1-DMb RT1 class II, locus DMb involved_in ISO
IEA 		(PMID:8139689)
GO_REF:0000107 		RGD
Ensembl		 PMID:8139689 GO_REF:0000107 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340 		JBrowse link
peptide antigen assembly with MHC class I protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IEA
ISO 		GO_REF:0000107
(PMID:36104323) 		Ensembl
RGD		 PMID:36104323 GO_REF:0000107 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Calr calreticulin involved_in ISO
IEA 		(PMID:35948544)
GO_REF:0000107
(PMID:11825569) 		RGD
Ensembl		 PMID:11825569 PMID:35948544 GO_REF:0000107 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 involved_in ISO
IEA 		(PMID:17603487)
GO_REF:0000107 		RGD
Ensembl		 PMID:17603487 GO_REF:0000107 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236 		JBrowse link
G RT1-CE16 RT1 class I, locus CE16 involved_in ISO (PMID:36104323) RGD PMID:36104323 NCBI chr20:3,257,109...3,260,747
Ensembl chr20:3,257,123...3,279,563 		JBrowse link
G Tapbp TAP binding protein involved_in ISO
IBA 		(PMID:10636848), (PMID:17603487)
GO_REF:0000033 		RGD
GO_Central		 PMID:10636848 PMID:17603487 GO_REF:0000033 NCBI chr20:4,956,937...4,966,191
Ensembl chr20:4,956,937...4,966,181 		JBrowse link
G Tapbpl TAP binding protein-like involved_in ISO (PMID:26869717) RGD PMID:26869717 NCBI chr 4:158,021,454...158,028,905 JBrowse link
peptide antigen assembly with MHC class II protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G ENSRNOG00000070540 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr11:81,944,458...81,946,438 JBrowse link
G Ighe immunoglobulin heavy constant epsilon involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-B RT1 class II, locus B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G RT1-Ba RT1 class II, locus Ba involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744 		JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597 		JBrowse link
G RT1-Da RT1 class II, locus Da involved_in ISO
IBA
IEA 		(PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 involved_in ISO
IBA 		(PMID:1448172), (PMID:22733780), (PMID:7606781)
GO_REF:0000033 		RGD
GO_Central		 PMID:1448172 PMID:7606781 PMID:22733780 GO_REF:0000033 NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258 		JBrowse link
G RT1-Db2 RT1 class II, locus Db2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,520,723...4,539,724
Ensembl chr20:4,520,713...4,539,705 		JBrowse link
G RT1-DMa RT1 class II, locus DMa involved_in ISO
IBA
IEA 		(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432 		JBrowse link
G RT1-DMb RT1 class II, locus DMb involved_in ISO
IBA
IEA 		(PMID:22733780), (PMID:23260142), (PMID:7606781), (PMID:9075930)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:7606781 PMID:9075930 PMID:22733780 PMID:23260142 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,693,102...4,700,340
Ensembl chr20:4,693,103...4,700,340 		JBrowse link
G RT1-DOb RT1 class II, locus DOb involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,619,418...4,625,627
Ensembl chr20:4,619,816...4,625,667 		JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,760,631...4,770,662
Ensembl chr20:4,760,118...4,770,244 		JBrowse link
G RT1-Hb-ps1 RT1 class II, locus Hb, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,775,598...4,779,590
Ensembl chr20:4,774,650...4,780,618 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular component organization or biogenesis 7114
        cellular component organization 6827
          cellular component assembly 3215
            protein-containing complex assembly 1616
              MHC protein complex assembly 19
                MHC class I protein complex assembly + 6
                MHC class II protein complex assembly + 14
                MHC class Ib protein complex assembly + 1
                peptide antigen assembly with MHC protein complex + 19
paths to the root