Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:mucosal immune response
go back to main search page
Accession:GO:0002385 term browser browse the term
Definition:An immune response taking place in mucosal tissues, including those of the intestinal tract, nasal and upper respiratory tract, and genital tract.
Synonyms:narrow_synonym: immune response in MALT;   immune response in mucosal-associated lymphoid tissue;   immune response in urogenital tract
 alt_id: GO:0002386;   GO:0002422



show annotations for term's descendants           Sort by:
mucosal immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd160 CD160 molecule involved_in ISO (PMID:22801499) RGD PMID:22801499 NCBI chr 2:187,029,654...187,042,447
Ensembl chr 2:184,340,599...184,375,834
JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:26764600) RGD PMID:26764600 NCBI chr18:73,679,106...73,776,694
Ensembl chr18:71,404,010...71,501,502
JBrowse link
G Fdcsp follicular dendritic cell secreted protein involved_in ISO MGI:6723808|MGI:7719862 (PMID:24399151) RGD PMID:24399151 NCBI chr14:20,169,691...20,173,983
Ensembl chr14:20,169,691...20,173,983
JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23665276)
UniProt
RGD
PMID:23665276 GO_REF:0000024 NCBI chr 1:95,199,277...95,202,599
Ensembl chr 1:86,072,184...86,075,033
JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:23665276)
UniProt
RGD
PMID:23665276 GO_REF:0000024 NCBI chr 1:95,232,804...95,234,144
Ensembl chr 1:86,104,920...86,106,849
JBrowse link
G Ifnl3 interferon, lambda 3 involved_in ISO (PMID:21518880) RGD PMID:21518880 NCBI chr 1:92,941,988...92,943,628
Ensembl chr 1:83,814,564...83,816,096
JBrowse link
G Ifnlr1 interferon, lambda receptor 1 involved_in ISO (PMID:21518880) RGD PMID:21518880 NCBI chr 5:153,203,597...153,225,911
Ensembl chr 5:147,919,908...147,942,332
JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in ISO (PMID:23334419) RGD PMID:23334419 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674
JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gp2 glycoprotein 2 acts_upstream_of_or_within ISO (PMID:19907495) RGD PMID:19907495 NCBI chr 1:183,228,395...183,243,954
Ensembl chr 1:173,797,057...173,812,619
JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigr polymeric immunoglobulin receptor involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:10229845), (PMID:22022593), (PMID:9379029)
GO_REF:0000033
Ensembl
UniProt
RGD
GO_Central
PMID:9379029 PMID:10229845 PMID:22022593 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr13:44,851,001...44,879,143
Ensembl chr13:42,298,914...42,326,875
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (PMID:9624171) RGD PMID:9624171 NCBI chr 9:99,001,044...99,014,340
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in IEA
ISO
GO_REF:0000107
(PMID:15254593)
Ensembl
RGD
PMID:15254593 GO_REF:0000107 NCBI chr 8:55,435,779...55,438,160
Ensembl chr 8:46,539,082...46,541,469
JBrowse link
G Bpifb1 BPI fold containing family B, member 1 involved_in ISO
IBA
IEA
(PMID:21900486)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:21900486 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:163,133,151...163,166,420
Ensembl chr 3:142,672,995...142,706,256
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Cldn2 claudin 2 involved_in ISO (PMID:28618266) RGD PMID:28618266 NCBI chr  X:108,248,383...108,258,847
Ensembl chr  X:103,459,780...103,474,838
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,052,014...77,053,046
Ensembl chr16:70,349,567...70,350,603
JBrowse link
G Defa3 defensin alpha 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,235,885...77,238,041
Ensembl chr16:70,533,436...70,535,604
JBrowse link
G Defa31 defensin alpha 31 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,216,346...77,218,685
Ensembl chr16:70,514,248...70,515,024
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,044,994...77,047,318
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defa6 defensin alpha 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,107,681...77,108,695
Ensembl chr16:70,405,268...70,406,142
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,135,579...77,136,612
Ensembl chr16:70,433,166...70,434,059
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,184,268...77,185,258
Ensembl chr16:70,481,821...70,482,717
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,073,954...77,074,943
Ensembl chr16:70,371,518...70,372,353
JBrowse link
G Defb1 defensin beta 1 involved_in ISO
IBA
(PMID:12860195)
GO_REF:0000033
RGD
GO_Central
PMID:12860195 GO_REF:0000033 NCBI chr16:77,001,326...77,016,068
Ensembl chr16:70,298,863...70,313,604
JBrowse link
G Defb10 defensin beta 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,905,070...76,915,205
Ensembl chr16:70,202,655...70,212,707
JBrowse link
G Defb11 defensin beta 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,858,512...76,865,529
Ensembl chr16:70,156,141...70,163,068
JBrowse link
G Defb2 defensin beta 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,934,341...76,948,284
Ensembl chr16:70,231,945...70,245,784
JBrowse link
G Defb37 defensin beta 37 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,485,949...77,499,215
Ensembl chr16:70,783,554...70,796,892
JBrowse link
G Defb38 defensin beta 38 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,458,787...77,462,118
Ensembl chr16:70,756,409...70,759,641
JBrowse link
G Defb39 defensin beta 39 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,442,770...77,446,574
Ensembl chr16:70,734,713...70,744,192
JBrowse link
G Defb9 defensin beta 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:76,883,161...76,886,073
Ensembl chr16:70,180,771...70,183,554
JBrowse link
G Ear1 eosinophil-associated, ribonuclease A family, member 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,028,785...27,029,694
Ensembl chr15:24,555,298...24,556,199
JBrowse link
G Ear1l1 eosinophil-associated, ribonuclease A family, member 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:26,960,332...26,961,207
Ensembl chr15:24,486,826...24,487,691
JBrowse link
G ENSRNOG00000064390 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr16:70,426,027...70,475,448 JBrowse link
G ENSRNOG00000069429 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr15:24,550,323...24,551,150 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 1:212,779,429...212,781,028
Ensembl chr 1:203,350,189...203,351,742
Ensembl chr 1:203,350,189...203,351,742
Ensembl chr 6:203,350,189...203,351,742
JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,181,477...47,181,940 JBrowse link
G H2bc18 H2B clustered histone 18 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:186,527,197...186,531,634
Ensembl chr 2:183,838,334...183,841,529
JBrowse link
G H2bc3 H2B clustered histone 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,807,913...41,808,543 JBrowse link
G H2bc6 H2B clustered histone 6 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,948,813...41,949,276 JBrowse link
G H2bc8 H2B clustered histone 8 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,404,405...47,405,155 JBrowse link
G H2bc9 H2B clustered histone 9 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,166,372...47,174,369 JBrowse link
G H2bu1 H2B.U histone 1 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr10:44,232,318...44,233,065
Ensembl chr10:43,732,864...43,736,277
JBrowse link
G Hist1h2bc histone cluster 1, H2bc involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,388,085...47,392,349
Ensembl chr17:42,694,723...42,696,642
JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:47,488,627...47,489,008 JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,859,955...41,869,889
Ensembl chr17:41,429,164...41,442,153
Ensembl chr17:41,429,164...41,442,153
Ensembl chr17:41,429,164...41,442,153
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:186,469,452...186,471,899 JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:9973465) RGD PMID:9973465 NCBI chr10:38,272,003...38,277,549
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G LOC100361866 eosinophil cationic protein-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:27,009,206...27,010,076
Ensembl chr15:24,535,700...24,536,592
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12037568) RGD PMID:12037568 NCBI chr 8:119,878,344...119,901,189
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:3529594 (PMID:15692051) RGD PMID:15692051 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,197,061...77,199,713
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO
IEA
(PMID:12860195)
GO_REF:0000107
RGD
Ensembl
PMID:12860195 GO_REF:0000107 NCBI chr12:46,802,932...46,814,511
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Ratnp-3b defensin rat NP-3 precursor involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:77,246,811...77,248,977
Ensembl chr16:70,513,888...70,546,522
JBrowse link
G Rnase17 ribonuclease 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:26,972,687...26,973,646
Ensembl chr15:24,499,178...24,500,095
JBrowse link
G Rnase2 ribonuclease A family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:26,923,125...26,923,934
Ensembl chr15:24,449,611...24,450,479
JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in ISO
IBA
(PMID:12860195)
GO_REF:0000033
RGD
GO_Central
PMID:12860195 GO_REF:0000033 NCBI chr15:26,985,399...26,986,269
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:121,192,901...121,195,896
Ensembl chr18:6,326,330...6,326,692
Ensembl chr  X:6,326,330...6,326,692
Ensembl chr  X:6,326,330...6,326,692
Ensembl chr15:6,326,330...6,326,692
Ensembl chr20:6,326,330...6,326,692
Ensembl chr 7:6,326,330...6,326,692
JBrowse link
positive regulation of immunoglobulin production in mucosal tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C10h17orf99 similar to human chromosome 17 open reading frame 99 involved_in ISO (PMID:28978694) RGD PMID:28978694 NCBI chr10:103,015,371...103,027,407
Ensembl chr10:103,016,505...103,027,407
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9973465)
Ensembl
RGD
PMID:9973465 GO_REF:0000107 NCBI chr13:79,781,784...79,785,440
Ensembl chr13:77,248,717...77,252,329
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20553
    response to stimulus 11038
      immune response 2219
        organ or tissue specific immune response 64
          mucosal immune response 60
            antigen sampling in mucosal-associated lymphoid tissue + 1
            immunoglobulin production in mucosal tissue + 2
            immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor 2
            innate immune response in mucosa 47
            mucosal tolerance induction + 0
paths to the root