|
G |
Polb |
DNA polymerase beta |
acts_upstream_of_or_within |
ISO |
MGI:5427084 (PMID:24388753) |
RGD |
PMID:24388753 |
|
NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
|
|
G |
Yy1 |
YY1 transcription factor |
involved_in |
ISO |
MGI:3624790 (PMID:23531880) |
RGD |
PMID:23531880 |
|
NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
|
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|
G |
Cyren |
cell cycle regulator of NHEJ |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:6202149|PMID:30017584), (MGI:6716972|PMID:31795137) |
UniProt Ensembl RGD |
PMID:30017584 PMID:31795137 |
GO_REF:0000024 GO_REF:0000107 MGI:6202149 MGI:6716972 |
NCBI chr 4:63,547,311...63,553,394
Ensembl chr 4:63,547,335...63,551,602
|
|
G |
Foxp1 |
forkhead box P1 |
acts_upstream_of_or_within |
ISO |
MGI:3711150 (PMID:16819554) |
RGD |
PMID:16819554 |
|
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
|
|
G |
Lig4 |
DNA ligase 4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:1857732 (PMID:9823897) |
GO_Central RGD |
PMID:9823897 |
GO_REF:0000033 |
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
|
|
G |
Nhej1 |
nonhomologous end-joining factor 1 |
involved_in |
ISO IEA ISS |
(PMID:20558749) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20558749 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
|
|
G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:2383951 (PMID:9768755) |
GO_Central RGD |
PMID:9768755 |
GO_REF:0000033 |
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
|
|
G |
Tcf3 |
transcription factor 3 |
acts_upstream_of_or_within involved_in |
ISO IEA IBA |
(PMID:16428437) MGI:2178112 (PMID:16428437) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 |
RGD TreeGrafter GO_Central Ensembl |
PMID:16428437 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 |
NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
|
|
G |
Xrcc4 |
X-ray repair cross complementing 4 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:1926771 (PMID:9875844) |
GO_Central RGD |
PMID:9875844 |
GO_REF:0000033 |
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
|
|
|
G |
Aicda |
activation-induced cytidine deaminase |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:5004983|PMID:21518874) (PMID:17713479) |
RGD |
PMID:17713479 PMID:21518874 |
MGI:5004983 |
NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
|
|
G |
Atad5 |
ATPase family, AAA domain containing 5 |
acts_upstream_of |
ISO |
MGI:4127920 (PMID:25404367) |
RGD |
PMID:25404367 |
|
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
|
|
G |
Batf |
basic leucine zipper ATF-like transcription factor |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4456325|PMID:20421391), (MGI:5004732|PMID:21572431) |
UniProt RGD |
PMID:20421391 PMID:21572431 |
GO_REF:0000024 MGI:4456325 MGI:5004732 |
NCBI chr 6:105,353,715...105,376,051
Ensembl chr 6:105,353,715...105,376,051
|
|
G |
Cd40lg |
CD40 ligand |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3687427|PMID:7529792) |
Ensembl RGD |
PMID:7529792 |
GO_REF:0000107 MGI:3687427 |
NCBI chr X:135,127,052...135,138,768
Ensembl chr X:135,126,969...135,138,306
|
|
G |
Ercc1 |
ERCC excision repair 1, endonuclease non-catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:2183944 (PMID:15280420) |
RGD |
PMID:15280420 |
|
NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
|
|
G |
Exo1 |
exonuclease 1 |
acts_upstream_of_or_within |
ISO |
MGI:2653925 (PMID:14716311) |
RGD |
PMID:14716311 |
|
NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654
|
|
G |
Exosc3 |
exosome component 3 |
involved_in |
ISO |
(MGI:5009766|PMID:21255825) |
RGD |
PMID:21255825 |
MGI:5009766 |
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
|
|
G |
Exosc6 |
exosome component 6 |
involved_in |
ISO |
(MGI:5009766|PMID:21255825) |
RGD |
PMID:21255825 |
MGI:5009766 |
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
|
|
G |
Lig4 |
DNA ligase 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857732 (PMID:17713479) |
RGD |
PMID:17713479 |
|
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
|
|
G |
Mlh1 |
mutL homolog 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857946 (PMID:12743174) |
Ensembl RGD |
PMID:12743174 |
GO_REF:0000107 |
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
|
|
G |
Msh2 |
mutS homolog 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857940|MGI:2151801 (PMID:10430621), (PMID:12743174) |
Ensembl RGD |
PMID:10430621 PMID:12743174 |
GO_REF:0000107 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
|
|
G |
Msh6 |
mutS homolog 6 |
acts_upstream_of_or_within |
ISO |
MGI:109352|MGI:3653701 (PMID:16618598), (PMID:17015724) |
RGD |
PMID:16618598 PMID:17015724 |
|
NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
|
|
G |
Nbn |
nibrin |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:3529405|PMID:15668383) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:15668383 |
GO_REF:0000024 GO_REF:0000107 MGI:3529405 |
NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
|
|
G |
Nfkbiz |
NFKB inhibitor zeta |
involved_in |
ISO |
MGI:3046930|MGI:5501251 (PMID:25124037), (PMID:31182790) |
RGD |
PMID:25124037 PMID:31182790 |
|
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
|
|
G |
Rnf168 |
ring finger protein 168 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4420833|PMID:20080757) |
UniProt RGD |
PMID:20080757 |
GO_REF:0000024 MGI:4420833 |
NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
|
|
G |
Rnf8 |
ring finger protein 8 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4420833|PMID:20080757) |
UniProt RGD |
PMID:20080757 |
GO_REF:0000024 MGI:4420833 |
NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
|
|
G |
Sanbr |
SANT and BTB domain regulator of CSR |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (MGI:6707280|PMID:33831416) |
UniProt Ensembl RGD |
PMID:33831416 |
GO_REF:0000024 GO_REF:0000107 MGI:6707280 |
NCBI chr14:97,516,652...97,585,955
Ensembl chr14:97,516,413...97,581,346
|
|
G |
Swap70 |
switching B-cell complex subunit SWAP70 |
acts_upstream_of_or_within |
ISO |
(PMID:9642267) |
RGD |
PMID:9642267 |
|
NCBI chr 1:164,267,588...164,328,796
Ensembl chr 1:164,267,609...164,328,794
|
|
G |
Ung |
uracil-DNA glycosylase |
acts_upstream_of_or_within |
ISO |
MGI:1343961 (PMID:17015724) |
RGD |
PMID:17015724 |
|
NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206
|
|
G |
Xrcc4 |
X-ray repair cross complementing 4 |
acts_upstream_of_or_within |
ISO |
MGI:1926771|MGI:3047571|MGI:3641440 (PMID:17713479) |
RGD |
PMID:17713479 |
|
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
|
|
|
G |
Ccr6 |
C-C motif chemokine receptor 6 |
involved_in |
ISO |
(MGI:5787846|PMID:27174992) |
RGD |
PMID:27174992 |
MGI:5787846 |
NCBI chr 1:52,474,477...52,508,301
Ensembl chr 1:52,474,168...52,498,603
|
|
|
G |
Bcl6 |
BCL6, transcription repressor |
acts_upstream_of |
ISO |
MGI:103034|MGI:2158438 (PMID:10490661) |
RGD |
PMID:10490661 |
|
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
|
|
G |
Foxp3 |
forkhead box P3 |
acts_upstream_of |
ISO |
MGI:3696705 (PMID:16275384) |
RGD |
PMID:16275384 |
|
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
|
|
G |
Il4 |
interleukin 4 |
acts_upstream_of |
ISO |
(PMID:14988498) |
RGD |
PMID:14988498 |
|
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
|
|
G |
Stat6 |
signal transducer and activator of transcription 6 |
acts_upstream_of |
ISO |
MGI:107187 (PMID:10490661) |
RGD |
PMID:10490661 |
|
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
|
|
|
G |
Hspd1 |
heat shock protein family D (Hsp60) member 1 |
involved_in |
ISO |
(PMID:16148103) |
RGD |
PMID:16148103 |
|
NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
|
|
G |
Il4 |
interleukin 4 |
acts_upstream_of |
ISO |
(PMID:14988498) |
RGD |
PMID:14988498 |
|
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
|
|
|
G |
Parp3 |
poly (ADP-ribose) polymerase family, member 3 |
involved_in |
ISO |
(MGI:6214451|PMID:26000965) |
RGD |
PMID:26000965 |
MGI:6214451 |
NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782
|
|
|
G |
Bcl6 |
BCL6, transcription repressor |
acts_upstream_of_or_within |
ISO |
MGI:103034|MGI:2158438 (PMID:10490661) |
RGD |
PMID:10490661 |
|
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
|
|
G |
Foxp3 |
forkhead box P3 |
acts_upstream_of_or_within |
ISO |
MGI:3696705 (PMID:16275384) |
RGD |
PMID:16275384 |
|
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
|
|
G |
Ndfip1 |
Nedd4 family interacting protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3695433 (PMID:17137798) |
Ensembl RGD |
PMID:17137798 |
GO_REF:0000107 |
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
|
|
|
G |
Tnfsf4 |
TNF superfamily member 4 |
involved_in |
ISO |
(MGI:3763508|PMID:12496423) |
RGD |
PMID:12496423 |
MGI:3763508 |
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
|
|
|
G |
Exosc3 |
exosome component 3 |
acts_upstream_of_or_within |
ISO |
(PMID:21255825) |
RGD |
PMID:21255825 |
|
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
|
|
G |
Exosc6 |
exosome component 6 |
acts_upstream_of_or_within |
ISO |
(PMID:21255825) |
RGD |
PMID:21255825 |
|
NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515
|
|
G |
Hmces |
5-hydroxymethylcytosine binding, ES cell specific |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6393148|PMID:31806351) |
UniProt RGD |
PMID:31806351 |
GO_REF:0000024 MGI:6393148 |
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
|
|
G |
Kmt5b |
lysine methyltransferase 5B |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6370097|PMID:28114273) |
UniProt RGD |
PMID:28114273 |
GO_REF:0000024 MGI:6370097 |
NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
|
|
G |
Kmt5c |
lysine methyltransferase 5C |
involved_in |
ISO ISS |
(MGI:6370097|PMID:28114273) GO_REF:0000024 |
RGD UniProt |
PMID:28114273 |
GO_REF:0000024 MGI:6370097 |
NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
|
|
G |
Mad2l2 |
mitotic arrest deficient 2 like 2 |
involved_in |
ISO |
(PMID:29656893) |
RGD |
PMID:29656893 |
|
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
|
|
G |
Paxip1 |
PAX interacting protein 1 |
involved_in |
ISO |
(MGI:4821506|PMID:20671152) |
RGD |
PMID:20671152 |
MGI:4821506 |
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
|
|
G |
Rif1 |
replication timing regulatory factor 1 |
involved_in |
ISO |
(MGI:5468036|PMID:23306439), (MGI:5476381|PMID:23333305), (MGI:5490831|PMID:23333306) |
RGD |
PMID:23306439 PMID:23333305 PMID:23333306 |
MGI:5468036 MGI:5476381 MGI:5490831 |
NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617
|
|
G |
Shld1 |
shieldin complex subunit 1 |
involved_in |
ISO IBA |
(PMID:29656893) GO_REF:0000033 |
RGD GO_Central |
PMID:29656893 |
GO_REF:0000033 |
NCBI chr 3:119,938,695...120,011,068
Ensembl chr 3:119,938,833...120,009,550
|
|
G |
Shld2 |
shieldin complex subunit 2 |
involved_in |
ISO |
(PMID:29656893) |
RGD |
PMID:29656893 |
|
NCBI chr16:9,544,940...9,640,323
Ensembl chr16:9,548,660...9,639,965
|
|
G |
Shld3 |
shieldin complex subunit 3 |
involved_in |
ISO |
(PMID:29656893) |
RGD |
PMID:29656893 |
|
NCBI chr 2:35,297,255...35,302,071
Ensembl chr 2:35,295,859...35,302,346
|
|
G |
Tfrc |
transferrin receptor |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:26642240) |
UniProt RGD |
PMID:26642240 |
GO_REF:0000024 |
NCBI chr11:68,163,413...68,185,257
Ensembl chr11:68,163,413...68,185,257
|
|
G |
Tp53bp1 |
tumor protein p53 binding protein 1 |
involved_in |
ISO |
(PMID:23345425), (PMID:23760478) (MGI:3041657|PMID:15077110), (MGI:3046005|PMID:15159415) |
RGD |
PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478 |
MGI:3041657 MGI:3046005 |
NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
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|
|
G |
Mlh1 |
mutL homolog 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:1342394|PMID:10430621) |
Ensembl RGD |
PMID:10430621 |
GO_REF:0000107 MGI:1342394 |
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
|
|
G |
Msh2 |
mutS homolog 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:1342394|PMID:10430621) |
Ensembl RGD |
PMID:10430621 |
GO_REF:0000107 MGI:1342394 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
|
|
G |
Nsd2 |
nuclear receptor binding SET domain protein 2 |
acts_upstream_of_or_within |
ISO |
(PMID:23241889) |
RGD |
PMID:23241889 |
|
NCBI chr14:76,833,179...76,911,304
Ensembl chr14:76,835,637...76,913,641
|
|
G |
Pms2 |
PMS1 homolog 2, mismatch repair system component |
involved_in |
ISO |
UniProtKB:Q9JK91 (MGI:1342394|PMID:10430621) |
RGD |
PMID:10430621 |
MGI:1342394 |
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
|
|
G |
Tgfb1 |
transforming growth factor, beta 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:14988498) |
AgBase RGD |
PMID:14988498 |
GO_REF:0000024 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
|
|
G |
Tnfsf12 |
TNF superfamily member 12 |
involved_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr10:54,403,870...54,413,213
Ensembl chr10:54,403,870...54,413,213
|
|
G |
Tnfsf13 |
TNF superfamily member 13 |
acts_upstream_of_or_within involved_in |
ISO IBA |
(PMID:14988498) MGI:3038886 (PMID:14988498) GO_REF:0000033 |
RGD GO_Central |
PMID:14988498 |
GO_REF:0000033 |
NCBI chr10:54,400,054...54,403,723
Ensembl chr10:54,400,065...54,403,042
|
|
|
G |
Clcf1 |
cardiotrophin-like cytokine factor 1 |
involved_in |
ISO |
(MGI:3777853|PMID:12023368) |
RGD |
PMID:12023368 |
MGI:3777853 |
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
|
|
G |
Il4 |
interleukin 4 |
acts_upstream_of_or_within |
ISO |
(PMID:14988498) |
RGD |
PMID:14988498 |
|
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
|
|
G |
Stat6 |
signal transducer and activator of transcription 6 |
acts_upstream_of_or_within |
ISO |
MGI:107187 (PMID:10490661) |
RGD |
PMID:10490661 |
|
NCBI chr 7:63,480,229...63,497,551
Ensembl chr 7:63,479,642...63,498,495
|
|
|
G |
Atad5 |
ATPase family, AAA domain containing 5 |
acts_upstream_of_or_within |
ISO |
MGI:4127920 (PMID:25404367) |
RGD |
PMID:25404367 |
|
NCBI chr10:65,070,682...65,118,489
Ensembl chr10:65,070,689...65,117,845
|
|
G |
Cd28 |
Cd28 molecule |
acts_upstream_of_or_within |
ISO |
MGI:1857150 (PMID:7688139) |
RGD |
PMID:7688139 |
|
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
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G |
Cd40 |
CD40 molecule |
acts_upstream_of_or_within |
ISO |
(PMID:12882831) |
RGD |
PMID:12882831 |
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NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
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G |
Ifng |
interferon gamma |
acts_upstream_of_or_within |
ISO |
(PMID:12882831) |
RGD |
PMID:12882831 |
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NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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G |
Il2 |
interleukin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857191 (PMID:1830926) |
RGD |
PMID:1830926 |
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NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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G |
Il4 |
interleukin 4 |
acts_upstream_of_or_within |
ISO |
(PMID:12882831), (PMID:14988498) |
RGD |
PMID:12882831 PMID:14988498 |
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NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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G |
Mlh1 |
mutL homolog 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:1342394|PMID:10430621) |
Ensembl RGD |
PMID:10430621 |
GO_REF:0000107 MGI:1342394 |
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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G |
Msh2 |
mutS homolog 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:1342394|PMID:10430621) |
Ensembl RGD |
PMID:10430621 |
GO_REF:0000107 MGI:1342394 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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|
G |
Pagr1 |
Paxip1-associated glutamate-rich protein 1 |
involved_in |
ISO |
(MGI:5752090|PMID:26744420) |
RGD |
PMID:26744420 |
MGI:5752090 |
NCBI chr 1:181,622,698...181,625,024
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G |
Paxip1 |
PAX interacting protein 1 |
involved_in |
ISO |
(MGI:5752090|PMID:26744420) |
RGD |
PMID:26744420 |
MGI:5752090 |
NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548
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G |
Pms2 |
PMS1 homolog 2, mismatch repair system component |
involved_in |
ISO |
UniProtKB:Q9JK91 (MGI:1342394|PMID:10430621) |
RGD |
PMID:10430621 |
MGI:1342394 |
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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|
G |
Ptprc |
protein tyrosine phosphatase, receptor type, C |
acts_upstream_of_or_within |
ISO |
MGI:2181288 (PMID:9015183) |
RGD |
PMID:9015183 |
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NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
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|
G |
Tbx21 |
T-box transcription factor 21 |
acts_upstream_of_or_within |
ISO |
MGI:2180194 (PMID:12882831) |
RGD |
PMID:12882831 |
|
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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G |
Aplf |
aprataxin and PNKP like factor |
acts_upstream_of_or_within |
ISO |
MGI:4128102 (PMID:21211721) |
RGD |
PMID:21211721 |
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NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
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G |
Mir181b1 |
microRNA 181b-1 |
acts_upstream_of_or_within |
ISO |
(PMID:18762567) |
RGD |
PMID:18762567 |
|
NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
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|
G |
Mir181b2 |
microRNA 181b-2 |
acts_upstream_of_or_within |
ISO |
(PMID:18762567) |
RGD |
PMID:18762567 |
|
NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
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|
G |
Supt6h |
SPT6 homolog, histone chaperone and transcription elongation factor |
involved_in |
ISO |
(MGI:5004983|PMID:21518874) |
RGD |
PMID:21518874 |
MGI:5004983 |
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
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|
|
G |
Foxp3 |
forkhead box P3 |
acts_upstream_of_or_within |
ISO |
MGI:3696705 (PMID:16275384) |
RGD |
PMID:16275384 |
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NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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|
G |
Il27ra |
interleukin 27 receptor subunit alpha |
acts_upstream_of_or_within |
ISO |
MGI:3525439 (PMID:11057672) |
RGD |
PMID:11057672 |
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NCBI chr19:24,109,963...24,121,977
Ensembl chr19:24,109,972...24,121,938
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|
G |
Ndfip1 |
Nedd4 family interacting protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3695433 (PMID:17137798) |
Ensembl RGD |
PMID:17137798 |
GO_REF:0000107 |
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
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|
G |
Slc15a4 |
solute carrier family 15 member 4 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5649169|PMID:25310967) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:25310967 |
GO_REF:0000024 GO_REF:0000107 MGI:5649169 |
NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
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|
|
G |
Adar |
adenosine deaminase, RNA-specific |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:23209284) |
Ensembl RGD |
PMID:23209284 |
GO_REF:0000107 |
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
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|
|
G |
Aicda |
activation-induced cytidine deaminase |
involved_in |
ISO |
(PMID:18722174) |
RGD |
PMID:18722174 |
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NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
|
|
G |
Ctnnbl1 |
catenin, beta like 1 |
involved_in |
ISO IEA |
(PMID:18722174) GO_REF:0000107 |
RGD Ensembl |
PMID:18722174 |
GO_REF:0000107 |
NCBI chr 3:146,387,940...146,548,987
Ensembl chr 3:146,387,889...146,548,987
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|
G |
Polb |
DNA polymerase beta |
acts_upstream_of_or_within |
ISO |
MGI:5427084 (PMID:24388753) |
RGD |
PMID:24388753 |
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NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
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|
|
G |
Aicda |
activation-induced cytidine deaminase |
involved_in |
ISO |
(PMID:21518874) |
RGD |
PMID:21518874 |
|
NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
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|
G |
Exo1 |
exonuclease 1 |
acts_upstream_of_or_within |
ISO |
MGI:2653925 (PMID:14716311) |
RGD |
PMID:14716311 |
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NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654
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|
G |
Hmces |
5-hydroxymethylcytosine binding, ES cell specific |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:7279208|PMID:35450882) (PMID:35450882) |
UniProt RGD |
PMID:35450882 |
GO_REF:0000024 MGI:7279208 |
NCBI chr 4:120,392,812...120,415,616
Ensembl chr 4:120,366,542...120,415,616
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|
G |
Mcm3ap |
minichromosome maintenance complex component 3 associated protein |
involved_in |
ISO |
(PMID:23652018) |
RGD |
PMID:23652018 |
|
NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165
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|
G |
Mlh1 |
mutL homolog 1 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 MGI:1857946 (PMID:10092760), (PMID:10429667) GO_REF:0000033 GO_REF:0000118 |
Ensembl RGD GO_Central TreeGrafter |
PMID:10092760 PMID:10429667 |
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 |
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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|
G |
Msh2 |
mutS homolog 2 |
involved_in NOT|acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1858055 (PMID:9607915) MGI:109352|MGI:1857940|MGI:1858055|MGI:2680817 (PMID:14568978), (PMID:15494304), (PMID:9607916), (PMID:9697842), (PMID:9697843) |
Ensembl RGD |
PMID:9607915 PMID:9607916 PMID:9697842 PMID:9697843 PMID:14568978 PMID:15494304 More...
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GO_REF:0000107 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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|
G |
Msh3 |
mutS homolog 3 |
NOT|acts_upstream_of_or_within |
ISO |
MGI:1858056 (PMID:10662804) |
RGD |
PMID:10662804 |
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NCBI chr 2:23,444,326...23,585,777
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G |
Msh6 |
mutS homolog 6 |
acts_upstream_of_or_within |
ISO |
MGI:1858014|MGI:3653701 (PMID:10662804), (PMID:15238604), (PMID:16618598), (PMID:17015724) |
RGD |
PMID:10662804 PMID:15238604 PMID:16618598 PMID:17015724 |
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NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
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|
G |
Nuggc |
nuclear GTPase, germinal center associated |
acts_upstream_of_or_within |
ISO |
MGI:5449552 (PMID:22833677) |
RGD |
PMID:22833677 |
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NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122
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|
G |
Pms2 |
PMS1 homolog 2, mismatch repair system component |
involved_in acts_upstream_of_or_within |
ISO IBA |
(MGI:1261707|PMID:9618520) MGI:1857947 (PMID:10429667) GO_REF:0000033 |
RGD GO_Central |
PMID:9618520 PMID:10429667 |
GO_REF:0000033 MGI:1261707 |
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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|
G |
Polb |
DNA polymerase beta |
acts_upstream_of_or_within |
ISO |
MGI:5427084 (PMID:24388753) |
RGD |
PMID:24388753 |
|
NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
|
|
G |
Polm |
DNA polymerase mu |
acts_upstream_of_or_within |
ISO |
MGI:2179233 (PMID:15789338) |
RGD |
PMID:15789338 |
|
NCBI chr14:80,707,075...80,716,677
Ensembl chr14:80,706,345...80,717,086
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|
G |
Polq |
DNA polymerase theta |
involved_in |
ISO |
(MGI:3603978|PMID:16172387), (MGI:3609287|PMID:16222339), (MGI:3692678|PMID:16890500) |
RGD |
PMID:16172387 PMID:16222339 PMID:16890500 |
MGI:3603978 MGI:3609287 MGI:3692678 |
NCBI chr11:63,673,796...63,775,905
Ensembl chr11:63,673,816...63,775,878
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|
G |
Samhd1 |
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 |
involved_in |
ISO |
(MGI:6157199|PMID:29669924) |
RGD |
PMID:29669924 |
MGI:6157199 |
NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
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|
G |
Ung |
uracil-DNA glycosylase |
acts_upstream_of_or_within |
ISO |
MGI:101816|MGI:2182610 (PMID:15494304), (PMID:17015724) |
RGD |
PMID:15494304 PMID:17015724 |
|
NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206
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G |
Mlh1 |
mutL homolog 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857946 (PMID:11828012) |
RGD |
PMID:11828012 |
|
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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|
G |
Msh2 |
mutS homolog 2 |
acts_upstream_of_or_within |
ISO |
MGI:109352|MGI:1857940|MGI:2151801|MGI:2680817 (PMID:11828012), (PMID:14563316), (PMID:14568978), (PMID:15494304), (PMID:15955838) |
RGD |
PMID:11828012 PMID:14563316 PMID:14568978 PMID:15494304 PMID:15955838 |
|
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
|
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G |
Msh3 |
mutS homolog 3 |
acts_upstream_of_or_within |
ISO |
MGI:1858056 (PMID:15238604) |
RGD |
PMID:15238604 |
|
NCBI chr 2:23,444,326...23,585,777
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G |
Msh6 |
mutS homolog 6 |
acts_upstream_of_or_within |
ISO |
MGI:1858014 (PMID:15238604) |
RGD |
PMID:15238604 |
|
NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
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G |
Pms2 |
PMS1 homolog 2, mismatch repair system component |
acts_upstream_of_or_within |
ISO |
MGI:1857947 (PMID:11828012) |
RGD |
PMID:11828012 |
|
NCBI chr12:10,676,818...10,701,161
Ensembl chr12:10,676,764...10,701,066
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|
G |
Ung |
uracil-DNA glycosylase |
acts_upstream_of_or_within |
ISO |
MGI:101816|MGI:2182610 (PMID:15494304) |
RGD |
PMID:15494304 |
|
NCBI chr12:42,485,276...42,494,217
Ensembl chr12:42,485,276...42,494,206
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G |
Mlh1 |
mutL homolog 1 |
acts_upstream_of_or_within |
ISO |
MGI:101816 (PMID:12743174) |
RGD |
PMID:12743174 |
|
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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G |
Msh2 |
mutS homolog 2 |
involved_in acts_upstream_of_or_within |
IBA ISO IEA |
GO_REF:0000033 MGI:101938 (PMID:12743174) GO_REF:0000118 |
GO_Central RGD TreeGrafter |
PMID:12743174 |
GO_REF:0000033 GO_REF:0000118 |
NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
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G |
Bcl11b |
BCL11 transcription factor B |
acts_upstream_of_or_within |
ISO |
MGI:2663971 (PMID:12717433) |
RGD |
PMID:12717433 |
|
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
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G |
Lef1 |
lymphoid enhancer binding factor 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:98507 (PMID:9462507) |
Ensembl RGD |
PMID:9462507 |
GO_REF:0000107 |
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
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G |
Lig4 |
DNA ligase 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857732 (PMID:10911993) |
RGD |
PMID:10911993 |
|
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
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|
G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:2383951 (PMID:9768755) |
RGD |
PMID:9768755 |
|
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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|
G |
Tcf7 |
transcription factor 7 |
acts_upstream_of_or_within |
ISO |
MGI:96770 (PMID:9462507) |
RGD |
PMID:9462507 |
|
NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535
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|
|
G |
Atm |
ATM serine/threonine kinase |
acts_upstream_of_or_within |
ISO |
MGI:104779 (PMID:23836881) |
RGD |
PMID:23836881 |
|
NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
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|
G |
Dcaf1 |
DDB1 and CUL4 associated factor 1 |
involved_in |
ISO |
(MGI:5314150|PMID:22157821) |
RGD |
PMID:22157821 |
MGI:5314150 |
NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627
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|
G |
Dclre1c |
DNA cross-link repair 1C |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:23836881) |
Ensembl RGD |
PMID:23836881 |
GO_REF:0000107 |
NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
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|
G |
Hmgb1 |
high mobility group box 1 |
involved_in |
ISO |
(PMID:9166431) |
RGD |
PMID:9166431 |
|
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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|
G |
Lig1 |
DNA ligase 1 |
NOT|involved_in |
ISO |
(PMID:9809069) |
RGD |
PMID:9809069 |
|
NCBI chr 1:74,165,688...74,204,400
Ensembl chr 1:74,165,842...74,204,413
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|
G |
Lig3 |
DNA ligase 3 |
NOT|involved_in |
ISO |
(PMID:9809069) |
RGD |
PMID:9809069 |
|
NCBI chr10:67,717,808...67,741,141
Ensembl chr10:67,717,812...67,798,414
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|
G |
Lig4 |
DNA ligase 4 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:9809069) MGI:1857732 (PMID:10716994), (PMID:15194694) |
RGD |
PMID:9809069 PMID:10716994 PMID:15194694 |
|
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
|
|
G |
Prkdc |
protein kinase, DNA-activated, catalytic subunit |
acts_upstream_of_or_within |
ISO |
MGI:107202 (PMID:23836881) |
RGD |
PMID:23836881 |
|
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
|
|
G |
Rag1 |
recombination activating 1 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:14670978) MGI:97849 (PMID:2360047) GO_REF:0000033 (MGI:4441018|PMID:20122409), (MGI:4441148|PMID:10601033), (MGI:50458|PMID:1547488), (MGI:64624|PMID:8284210) |
RGD GO_Central |
PMID:1547488 PMID:2360047 PMID:8284210 PMID:10601033 PMID:14670978 PMID:20122409 More...
|
GO_REF:0000033 MGI:4441018 MGI:4441148 MGI:50458 MGI:64624 |
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
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|
G |
Rag2 |
recombination activating 2 |
involved_in acts_upstream_of_or_within |
ISO IBA |
(MGI:4441252|PMID:18033247), (MGI:50458|PMID:1547488) MGI:97848 (PMID:2360047) GO_REF:0000033 |
RGD GO_Central |
PMID:1547488 PMID:2360047 PMID:18033247 |
GO_REF:0000033 MGI:4441252 MGI:50458 |
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
|
|
G |
Xrcc4 |
X-ray repair cross complementing 4 |
acts_upstream_of_or_within |
ISO |
MGI:1926771 (PMID:10716994) |
RGD |
PMID:10716994 |
|
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
|
|
G |
Xrcc6 |
X-ray repair cross complementing 6 |
acts_upstream_of_or_within |
ISO |
MGI:2179954 (PMID:10716994) |
RGD |
PMID:10716994 |
|
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
|
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