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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell development
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Accession:GO:0002064 term browser browse the term
Definition:The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.


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epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTSL4 ADAMTS like 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5698751|PMID:26405179) Ensembl
MGI
PMID:26405179 GO_REF:0000107 MGI:5698751 NCBI chr 4:98,577,813...98,589,255
Ensembl chr 4:98,577,820...98,589,175
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:87365|PMID:9155011) Ensembl
MGI
PMID:9155011 GO_REF:0000107 MGI:87365 NCBI chr10:33,317,295...33,381,285
Ensembl chr10:33,317,305...33,381,289
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO RGD PMID:15358596 RGD:1600768 NCBI chr15:15,663,652...15,666,706
Ensembl chr15:15,663,494...15,667,233
JBrowse link
G E2F4 E2F transcription factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3710305|PMID:17383628) Ensembl
MGI
PMID:17383628 GO_REF:0000107 MGI:3710305 NCBI chr 6:27,834,356...27,841,419
Ensembl chr 6:27,833,924...27,841,419
JBrowse link
G ESR1 estrogen receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839071|PMID:18755802) Ensembl
MGI
PMID:18755802 GO_REF:0000107 MGI:3839071 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G HYDIN HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (MGI:3793384|PMID:18250199) MGI PMID:18250199 MGI:3793384 NCBI chr 6:13,895,276...14,307,790 JBrowse link
G MUC2 mucin 2, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO (MGI:2159585|PMID:11872843) MGI PMID:11872843 MGI:2159585 NCBI chr 2:689,363...719,542 JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3723392|PMID:16472605) Ensembl
MGI
PMID:16472605 GO_REF:0000107 MGI:3723392 NCBI chr 1:118,913,400...118,958,140
Ensembl chr 1:118,913,785...118,954,614
JBrowse link
G ONECUT2 one cut homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3723392|PMID:16472605) Ensembl
MGI
PMID:16472605 GO_REF:0000107 MGI:3723392 NCBI chr 1:106,751,346...106,812,484
Ensembl chr 1:106,751,173...106,799,607
JBrowse link
G PAX6 paired box 6 ISO corneal epithelial cells RGD PMID:19393751 RGD:8552646 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,971,567...29,001,200
JBrowse link
G SHROOM3 shroom family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:72,097,561...72,443,869 JBrowse link
G SLC4A5 solute carrier family 4 member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5292606|PMID:21705333) Ensembl
MGI
PMID:21705333 GO_REF:0000107 MGI:5292606 NCBI chr 3:68,733,379...68,819,293
Ensembl chr 3:68,692,694...68,819,292
JBrowse link
G SLC9A4 solute carrier family 9 member A4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578697|PMID:15684419) Ensembl
MGI
PMID:15684419 GO_REF:0000107 MGI:3578697 NCBI chr 3:51,686,001...51,749,996
Ensembl chr 3:51,686,672...51,750,073
JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5433834|PMID:21127502)
(MGI:3761221|PMID:16601749)
Ensembl
MGI
PMID:16601749 PMID:21127502 GO_REF:0000107 MGI:3761221 MGI:5433834 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,104...127,347,075
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC88C coiled-coil domain containing 88C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:112,917,436...113,030,442
Ensembl chr 7:112,917,448...113,045,686
JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4438998|PMID:20103536) Ensembl
MGI
PMID:20103536 GO_REF:0000107 MGI:4438998 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,217...31,295,896
JBrowse link
G FRMD6 FERM domain containing 6 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr 1:181,338,404...181,416,813
Ensembl chr 1:181,175,350...181,416,806
JBrowse link
G PARD3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr10:56,968,100...57,600,515
Ensembl chr10:56,967,424...57,600,466
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG10 ALG10 alpha-1,2-glucosyltransferase acts_upstream_of_or_within ISO (MGI:5568671|PMID:24303013) MGI PMID:24303013 MGI:5568671 NCBI chr 5:40,416,335...40,423,026 JBrowse link
G CLRN1 clarin 1 acts_upstream_of_or_within ISO (MGI:3849925|PMID:19414487) MGI PMID:19414487 MGI:3849925 NCBI chr13:91,104,850...91,152,397
Ensembl chr13:91,106,323...91,147,832
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:3527944 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,675,323...1,989,110
Ensembl chr 2:1,675,360...1,989,111
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,567,337...48,735,838
JBrowse link
G PDZD7 PDZ domain containing 7 acts_upstream_of_or_within ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chr14:112,088,332...112,111,348 JBrowse link
G SLC4A7 solute carrier family 4 member 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2680888|PMID:12808454)
GO_Central
MGI
PMID:12808454 PMID:21873635 MGI:2680888 NCBI chr13:13,933,552...14,043,108
Ensembl chr13:13,933,711...14,043,068
JBrowse link
G TMC1 transmembrane channel like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5320864|PMID:22105175) Ensembl
MGI
PMID:22105175 GO_REF:0000107 MGI:5320864 NCBI chr 1:225,714,601...226,111,045
Ensembl chr 1:225,714,021...226,110,917
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (MGI:4353582|PMID:19363478) MGI PMID:19363478 MGI:4353582 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,771...4,803,687
JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chr 4:824,925...852,360 JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chr 8:112,670,529...112,762,870
Ensembl chr 8:112,670,533...112,762,858
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (MGI:4413621|PMID:19936227) MGI PMID:19936227 MGI:4413621 NCBI chr11:56,508,713...56,522,270
Ensembl chr11:56,508,709...56,522,212
JBrowse link
G WDPCP WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chr 3:78,435,154...78,726,313 JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:3709803 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,322...66,897,128
JBrowse link
G CDH23 cadherin related 23 acts_upstream_of_or_within ISO (MGI:3625226|PMID:12121736)
(MGI:1929001|PMID:11138008), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710)
(MGI:1933915|PMID:11322776)
(MGI:3526751|PMID:15537665)
(MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chr14:74,267,547...74,734,623
Ensembl chr14:74,223,089...74,733,834
JBrowse link
G CLIC5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:3663248 NCBI chr 7:40,683,044...40,808,017
Ensembl chr 7:40,682,907...40,863,886
JBrowse link
G CLRN1 clarin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712) Ensembl
MGI
PMID:19414487 PMID:19423712 GO_REF:0000107 MGI:3849925 MGI:4353469 NCBI chr13:91,104,850...91,152,397
Ensembl chr13:91,106,323...91,147,832
JBrowse link
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6278501|PMID:30380417) Ensembl
MGI
PMID:30380417 GO_REF:0000107 MGI:6278501 NCBI chr 2:147,215,061...147,231,792
Ensembl chr 2:147,216,279...147,232,250
JBrowse link
G LHFPL5 LHFPL tetraspan subfamily member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578102|PMID:15905332)
(MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710)
Ensembl
MGI
PMID:15905332 PMID:17876667 PMID:23217710 GO_REF:0000107 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chr 7:31,624,050...31,642,269
Ensembl chr 7:31,623,849...31,642,268
JBrowse link
G MYO3A myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chr10:49,392,119...49,623,575 JBrowse link
G MYO3B myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chr15:76,432,429...76,855,443
Ensembl chr15:76,401,963...76,855,432
JBrowse link
G MYO7A myosin VIIA involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3686545|PMID:17050716)
(MGI:2156358|PMID:11753415)
(MGI:3625226|PMID:12121736)
Ensembl
MGI
PMID:11753415 PMID:12121736 PMID:17050716 GO_REF:0000107 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chr 9:11,251,187...11,337,618
Ensembl chr 9:11,249,075...11,666,296
JBrowse link
G PCDH15 protocadherin related 15 acts_upstream_of_or_within ISO (MGI:5468200|PMID:23217710)
(MGI:3654702|PMID:16887306)
(MGI:1928787|PMID:10978835)
(MGI:3619110|PMID:11124469)
(MGI:3526751|PMID:15537665)
MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chr14:95,530,168...96,388,032 JBrowse link
G PDZD7 PDZ domain containing 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5565635|PMID:24334608)
GO_Central
MGI
PMID:21873635 PMID:24334608 MGI:5565635 NCBI chr14:112,088,332...112,111,348 JBrowse link
G PLS1 plastin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,307,692...83,434,133
Ensembl chr13:83,308,007...83,434,128
JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:6193260|PMID:29961578) UniProt PMID:29961578 MGI:6193260 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:19,609,358...19,842,345
Ensembl chr 7:19,587,685...19,838,093
JBrowse link
G SCRIB scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chr 4:824,925...852,360 JBrowse link
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4439427|PMID:20215345) Ensembl
MGI
PMID:20215345 GO_REF:0000107 MGI:4439427 NCBI chr 8:112,670,529...112,762,870
Ensembl chr 8:112,670,533...112,762,858
JBrowse link
G SLC9A3R1 SLC9A3 regulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5578076|PMID:24920589) Ensembl
MGI
PMID:24920589 GO_REF:0000107 MGI:5578076 NCBI chr12:6,466,138...6,483,539
Ensembl chr12:6,466,120...6,493,428
JBrowse link
G SOD1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373) Ensembl
MGI
PMID:10464373 PMID:10466888 GO_REF:0000107 MGI:1344578 MGI:3700629 NCBI chr13:195,326,573...195,335,273
Ensembl chr13:195,326,649...195,337,749
JBrowse link
G STRC stereocilin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3818235|PMID:18849963) Ensembl
MGI
PMID:18849963 GO_REF:0000107 MGI:3818235 NCBI chr 1:127,830,759...127,852,392
Ensembl chr 1:127,821,905...127,852,339
JBrowse link
G TPRN taperin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6278501|PMID:30380417) Ensembl
MGI
PMID:30380417 GO_REF:0000107 MGI:6278501
G TRIOBP TRIO and F-actin binding protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4881391|PMID:20510926) Ensembl
MGI
PMID:20510926 GO_REF:0000107 MGI:4881391 NCBI chr 5:10,066,080...10,132,668
Ensembl chr 5:10,066,086...10,126,491
JBrowse link
G WHRN whirlin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5796227|PMID:27117407)
GO_Central
MGI
PMID:21873635 PMID:27117407 MGI:5796227 NCBI chr 1:255,009,765...255,095,281
Ensembl chr 1:255,009,768...255,095,223
JBrowse link
central nervous system vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821408|PMID:19023080) Ensembl
MGI
PMID:19023080 GO_REF:0000107 MGI:3821408 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,306,120...268,343,827
JBrowse link
G RTN4 reticulon 4 involved_in ISO (MGI:5492189|PMID:23625008) UniProt PMID:23625008 MGI:5492189 NCBI chr 3:86,180,022...86,252,126
Ensembl chr 3:86,180,047...86,252,122
JBrowse link
G WNT7A Wnt family member 7A acts_upstream_of_or_within ISO (MGI:3821408|PMID:19023080) MGI PMID:19023080 MGI:3821408 NCBI chr13:70,538,802...70,602,464
Ensembl chr13:70,538,894...70,602,455
JBrowse link
G WNT7B Wnt family member 7B acts_upstream_of_or_within ISO (MGI:3821408|PMID:19023080) MGI PMID:19023080 MGI:3821408 NCBI chr 5:3,521,412...3,572,322
Ensembl chr 5:3,521,695...3,572,314
JBrowse link
columnar/cuboidal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,409,877...44,535,784
Ensembl chr 1:44,409,931...44,534,874
JBrowse link
G SHROOM3 shroom family member 3 acts_upstream_of_or_within ISO (MGI:3610718|PMID:16249236) MGI PMID:16249236 MGI:3610718 NCBI chr 8:72,097,561...72,443,869 JBrowse link
columnar/cuboidal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (MGI:6443509|PMID:31336344) MGI PMID:31336344 MGI:6443509 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
corneocyte desquamation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA12 ATP binding cassette subfamily A member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:117,244,704...117,451,009
Ensembl chr15:117,244,763...117,451,261
JBrowse link
G CDSN corneodesmosin involved_in ISO (PMID:26014679) CAFA PMID:26014679 NCBI chr 7:23,520,142...23,524,372
Ensembl chr 7:23,520,142...23,524,372
JBrowse link
corneocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chr 3:39,757,725...39,761,497 JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763
JBrowse link
endothelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCM2 CCM2 scaffold protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3837878|PMID:19151727) Ensembl
MGI
PMID:19151727 GO_REF:0000107 MGI:3837878 NCBI chr18:50,396,423...50,450,442
Ensembl chr18:50,396,423...50,450,132
JBrowse link
G GPX1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3698597|PMID:16373599) Ensembl
MGI
PMID:16373599 GO_REF:0000107 MGI:3698597 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,914,932...31,917,335
JBrowse link
G HEG1 heart development protein with EGF like domains 1 acts_upstream_of_or_within ISO (MGI:3837878|PMID:19151727) MGI PMID:19151727 MGI:3837878 NCBI chr13:135,268,566...135,358,673 JBrowse link
G VEZF1 vascular endothelial zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3581991|PMID:15882861) Ensembl
MGI
PMID:15882861 GO_REF:0000107 MGI:3581991 NCBI chr12:34,245,886...34,263,806
Ensembl chr12:34,245,884...34,263,573
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF26 Rho guanine nucleotide exchange factor 26 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5486234|PMID:23372835) Ensembl
MGI
PMID:23372835 GO_REF:0000107 MGI:5486234 NCBI chr13:94,155,632...94,296,699
Ensembl chr13:94,155,657...94,345,564
JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3837628|PMID:19197003) Ensembl
MGI
PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 6:82,401,041...82,483,038
Ensembl chr 6:82,401,188...82,483,724
JBrowse link
G CNMD chondromodulin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2656472|PMID:12714610)
GO_Central
MGI
PMID:12714610 PMID:21873635 MGI:2656472 NCBI chr11:25,959,192...25,994,773
Ensembl chr11:25,961,915...25,994,651
JBrowse link
G COL15A1 collagen type XV alpha 1 chain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:240,718,128...240,829,188
Ensembl chr 1:240,653,017...240,829,188
JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3046127|PMID:15188432)
GO_Central
MGI
PMID:15188432 PMID:21873635 MGI:3046127 NCBI chr13:207,907,835...207,984,082
Ensembl chr13:207,907,857...207,985,181
JBrowse link
G COL22A1 collagen type XXII alpha 1 chain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:4,069,045...4,313,198
Ensembl chr 4:4,069,076...4,313,196
JBrowse link
G COL26A1 collagen type XXVI alpha 1 chain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:9,003,126...9,164,074
Ensembl chr 3:9,003,741...9,164,070
JBrowse link
G HEG1 heart development protein with EGF like domains 1 acts_upstream_of_or_within ISO (MGI:3837878|PMID:19151727) MGI PMID:19151727 MGI:3837878 NCBI chr13:135,268,566...135,358,673 JBrowse link
G HOXA13 homeobox A13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3797428|PMID:18483557) Ensembl
MGI
PMID:18483557 GO_REF:0000107 MGI:3797428 NCBI chr18:45,373,340...45,379,046
Ensembl chr18:45,373,440...45,380,300
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:3759000|PMID:17717145) MGI PMID:17717145 MGI:3759000 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,315,964...35,317,744
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:4940123|PMID:21285373) MGI PMID:21285373 MGI:4940123 NCBI chr11:943,444...1,025,617
Ensembl chr11:943,469...1,022,953
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,044...29,541,512
JBrowse link
G NOTCH4 notch receptor 4 ISO RGD PMID:10964583 RGD:1304484 NCBI chr 7:24,231,293...24,256,281
Ensembl chr 7:24,231,293...24,256,281
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3723364|PMID:17563397) MGI PMID:17563397 MGI:3723364 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,582,481...14,723,336
JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3618677|PMID:16467571) Ensembl
MGI
PMID:16467571 GO_REF:0000107 MGI:3618677 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,787...8,919,516
JBrowse link
G STC1 stanniocalcin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,952,175...7,961,365
Ensembl chr14:7,950,389...7,961,566
JBrowse link
G TNMD tenomodulin involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2656472|PMID:12714610)
GO_Central
MGI
PMID:12714610 PMID:21873635 MGI:2656472 NCBI chr  X:82,269,323...82,292,083
Ensembl chr  X:82,269,239...82,292,248
JBrowse link
epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628967|PMID:16449351) Ensembl
MGI
PMID:16449351 GO_REF:0000107 MGI:3628967 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,593,548...14,752,310
JBrowse link
G FEM1B fem-1 homolog B acts_upstream_of_or_within ISO (MGI:3809320|PMID:18816836) MGI PMID:18816836 MGI:3809320 NCBI chr 1:166,161,548...166,178,086
Ensembl chr 1:166,162,883...166,175,937
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3624198|PMID:16624854) MGI PMID:16624854 MGI:3624198 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,515...41,002,137
JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3625254|PMID:11223304) Ensembl
MGI
PMID:11223304 GO_REF:0000107 MGI:3625254 NCBI chr13:198,051,281...198,059,444 JBrowse link
G PGR progesterone receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3028786|PMID:14765981) Ensembl
MGI
PMID:14765981 GO_REF:0000107 MGI:3028786 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (MGI:5299935|PMID:22071110) UniProt PMID:22071110 MGI:5299935 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,333...95,525,436
JBrowse link
G TFCP2L1 transcription factor CP2 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703120|PMID:17079272) Ensembl
MGI
PMID:17079272 GO_REF:0000107 MGI:3703120 NCBI chr15:30,072,142...30,131,810
Ensembl chr15:30,072,172...30,137,094
JBrowse link
G TMEM79 transmembrane protein 79 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,762,176...93,768,840
Ensembl chr 4:93,762,177...93,768,633
JBrowse link
G XBP1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:3768452|PMID:16362047) MGI PMID:16362047 MGI:3768452 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,017,036
JBrowse link
epithelial cell maturation involved in prostate gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESR2 estrogen receptor 2 acts_upstream_of_or_within ISO (MGI:3047056|PMID:15187231) MGI PMID:15187231 MGI:3047056 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,722,164...193,906,565
JBrowse link
G FEM1B fem-1 homolog B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3809320|PMID:18816836) Ensembl
MGI
PMID:18816836 GO_REF:0000107 MGI:3809320 NCBI chr 1:166,161,548...166,178,086
Ensembl chr 1:166,162,883...166,175,937
JBrowse link
G FOXA1 forkhead box A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603077|PMID:15987773) Ensembl
MGI
PMID:15987773 GO_REF:0000107 MGI:3603077 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,228...62,479,223
JBrowse link
G HOXB13 homeobox B13 acts_upstream_of_or_within ISO (MGI:2653645|PMID:12668621) MGI PMID:12668621 MGI:2653645 NCBI chr12:24,948,307...24,950,661
Ensembl chr12:24,947,728...24,950,637
JBrowse link
epithelial cell maturation involved in salivary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XBP1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:3768452|PMID:16362047) MGI PMID:16362047 MGI:3768452 NCBI chr14:46,011,239...46,016,526
Ensembl chr14:46,008,377...46,017,036
JBrowse link
epithelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5050497|PMID:21084446) Ensembl
MGI
PMID:21084446 GO_REF:0000107 MGI:5050497 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,805,578
JBrowse link
G BCL11B BAF chromatin remodeling complex subunit BCL11B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3838423|PMID:19251658) Ensembl
MGI
PMID:19251658 GO_REF:0000107 MGI:3838423 NCBI chr 7:120,205,008...120,295,737
Ensembl chr 7:120,205,008...120,295,815
JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) MGI PMID:22766025 MGI:5449145 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986
JBrowse link
G CGN cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) MGI PMID:24385485 MGI:5562592 NCBI chr 4:97,704,805...97,730,498 JBrowse link
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,295...11,019,960
JBrowse link
G DACT2 dishevelled binding antagonist of beta catenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,413,892...1,424,015
Ensembl chr 1:1,413,856...1,424,023
JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chr15:31,159,214...31,295,891
Ensembl chr15:31,159,217...31,295,896
JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chr17:8,466,099...8,580,715
Ensembl chr17:8,448,760...8,580,715
JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) MGI PMID:24012369 MGI:5516520 NCBI chr13:39,789,259...39,938,751
Ensembl chr13:39,789,703...39,938,750
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)
UniProt PMID:22696678 PMID:25152456 MGI:5499697 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919
JBrowse link
G HRH2 histamine receptor H2 acts_upstream_of_or_within ISO (MGI:1860000|PMID:10862789) MGI PMID:10862789 MGI:1860000 NCBI chr 2:81,883,670...81,932,464
Ensembl chr 2:81,883,670...81,932,275
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807419|PMID:18582859) Ensembl
MGI
PMID:18582859 GO_REF:0000107 MGI:3807419 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121
JBrowse link
G JMJD1C jumonji domain containing 1C acts_upstream_of_or_within ISO (MGI:5529185|PMID:24006281) MGI PMID:24006281 MGI:5529185 NCBI chr14:66,640,845...66,966,911
Ensembl chr14:66,640,849...66,967,077
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:5467663|PMID:23201579) MGI PMID:23201579 MGI:5467663 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,871,799...35,946,987
JBrowse link
G MIR205 microRNA mir-205 acts_upstream_of_or_within ISO (MGI:4439000|PMID:20103531) MGI PMID:20103531 MGI:4439000 NCBI chr 9:133,517,078...133,517,146
Ensembl chr 9:133,517,078...133,517,146
JBrowse link
G PALLD palladin, cytoskeletal associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5516520|PMID:24012369) Ensembl
MGI
PMID:24012369 GO_REF:0000107 MGI:5516520 NCBI chr14:20,678,456...21,020,125
Ensembl chr14:20,678,451...21,020,125
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) UniProt PMID:32698519 NCBI chr 7:45,447,354...45,925,141
Ensembl chr 7:45,447,357...45,925,113
JBrowse link
G POF1B POF1B actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:68,503,170...68,579,917
Ensembl chr  X:68,503,179...68,579,893
JBrowse link
G RAB25 RAB25, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:93,961,136...93,970,742
Ensembl chr 4:93,961,148...93,970,712
JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chr 3:4,781,776...4,803,510
Ensembl chr 3:4,781,771...4,803,687
JBrowse link
G RILPL1 Rab interacting lysosomal protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:29,424,120...29,470,679
Ensembl chr14:29,424,115...29,476,223
JBrowse link
G RILPL2 Rab interacting lysosomal protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:29,478,135...29,522,923
Ensembl chr14:29,477,281...29,523,166
JBrowse link
G RNASE10 ribonuclease A family member 10 (inactive) acts_upstream_of_or_within ISO (MGI:5050497|PMID:21084446) MGI PMID:21084446 MGI:5050497 NCBI chr 7:78,390,612...78,414,401
Ensembl chr 7:78,391,458...78,396,857
JBrowse link
G SIPA1L3 signal induced proliferation associated 1 like 3 involved_in ISO (PMID:26231217)
(MGI:5697095|PMID:26231217)
UniProt PMID:26231217 MGI:5697095 NCBI chr 6:46,948,078...47,139,551 JBrowse link
G VSIG1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5297312|PMID:21991385) InterPro
MGI
PMID:21991385 GO_REF:0000002 MGI:5297312 NCBI chr  X:88,468,498...88,534,958 JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5634845|PMID:25758223) Ensembl
MGI
PMID:25758223 GO_REF:0000107 MGI:5634845 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919
JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
MGI
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr 6:47,181,772...47,210,564
Ensembl chr 6:47,181,768...47,210,561
JBrowse link
G ST14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360135|PMID:19592578) Ensembl
MGI
PMID:19592578 GO_REF:0000107 MGI:4360135 NCBI chr 9:56,888,246...56,929,771
Ensembl chr 9:56,888,246...56,929,771
JBrowse link
establishment of blood-nerve barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen acts_upstream_of_or_within ISO (MGI:2385816|PMID:9734405) MGI PMID:9734405 MGI:2385816 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,672,428
JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:22733753 RGD:11341802 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,767...127,730,657
JBrowse link
G DMD dystrophin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3612931|PMID:12673830) MGI
Ensembl
PMID:12673830 GO_REF:0000107 MGI:3612931 NCBI chr  X:27,028,223...29,650,728
Ensembl chr  X:27,028,223...29,181,689
JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437139|PMID:20181608) Ensembl
MGI
PMID:20181608 GO_REF:0000107 MGI:4437139 NCBI chr 4:93,462,306...93,468,394
Ensembl chr 4:93,462,308...93,467,802
JBrowse link
G REN renin NOT|acts_upstream_of_or_within ISO (MGI:1351364|PMID:10617578) MGI PMID:10617578 MGI:1351364 NCBI chr 9:64,809,143...64,822,605
Ensembl chr 9:64,809,146...64,822,636
JBrowse link
establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN5 claudin 5 involved_in IMP (PMID:24280217) AgBase PMID:24280217 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,032...51,163,482
JBrowse link
G EZR ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,403,362...8,452,750
Ensembl chr 1:8,403,453...8,452,750
JBrowse link
G F2RL1 F2R like trypsin receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:85,732,082...85,747,552
Ensembl chr 2:85,732,189...85,750,858
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
JBrowse link
G MARVELD2 MARVEL domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,529,857...47,563,485
Ensembl chr16:47,530,068...47,563,482
JBrowse link
G MSN moesin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:51,844,197...51,967,674
Ensembl chr  X:51,844,112...51,968,850
JBrowse link
G MYADM myeloid associated differentiation marker involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,236,306...56,278,577
Ensembl chr 6:56,236,306...56,278,582
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964
JBrowse link
G PDE4D phosphodiesterase 4D involved_in ISS UniProt GO_REF:0000024 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,300...39,154,586
JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,582,481...14,723,336
JBrowse link
G PPP1R16B protein phosphatase 1 regulatory subunit 16B involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5604907|PMID:21907835)
GO_Central
MGI
PMID:21873635 PMID:21907835 MGI:5604907 NCBI chr17:41,753,697...41,866,671
Ensembl chr17:41,752,845...41,866,375
JBrowse link
G RAP1A RAP1A, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:108,675,537...108,750,952
Ensembl chr 4:108,676,685...108,749,725
JBrowse link
G RAP1B RAP1B, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,910,181...32,961,972
Ensembl chr 5:32,910,259...32,964,879
JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chr 1:271,494,243...271,624,609
Ensembl chr 1:271,494,248...271,600,879
JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chr 8:48,183,518...48,277,476
Ensembl chr 8:48,020,697...48,277,476
JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:78,101,286...78,134,150
Ensembl chr 5:78,101,289...78,134,103
JBrowse link
G RDX radixin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,243,608...38,299,561
Ensembl chr 9:38,220,441...38,376,439
JBrowse link
G ROBO4 roundabout guidance receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:52,083,757...52,097,784
Ensembl chr 9:52,083,008...52,097,744
JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:62,869,868...62,871,758
Ensembl chr17:62,869,870...62,871,748
JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,295...11,019,960
JBrowse link
G FOXP3 forkhead box P3 ISO RGD PMID:31027862 RGD:38549575 NCBI chr  X:43,303,777...43,328,164
Ensembl chr  X:43,303,782...43,328,735
JBrowse link
establishment of endothelial intestinal barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFDN afadin, adherens junction formation factor involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,569,655...1,698,776
JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:22684624 RGD:11341733 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,767...127,730,657
JBrowse link
G F11R F11 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,425,101...89,447,889
Ensembl chr 4:89,425,039...89,449,932
JBrowse link
G FASN fatty acid synthase acts_upstream_of_or_within ISO (MGI:5630041|PMID:25565205) MGI PMID:25565205 MGI:5630041 NCBI chr12:922,405...937,560
Ensembl chr12:920,507...937,559
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:10201790 RGD:11520782 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
JBrowse link
G MIR874 microRNA mir-874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr 2:139,660,118...139,660,201
Ensembl chr 2:139,660,118...139,660,201
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5306517|PMID:22155109) Ensembl
MGI
PMID:22155109 GO_REF:0000107 MGI:5306517 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,964,071...22,983,109
JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5550154|PMID:24385580) Ensembl
MGI
PMID:24385580 GO_REF:0000107 MGI:5550154 NCBI chr 2:73,607,815...73,680,685
Ensembl chr 2:73,574,854...73,680,685
JBrowse link
G RAB1A RAB1A, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr 3:76,837,673...76,868,156
Ensembl chr 3:76,837,430...76,869,778
JBrowse link
G RAB1B RAB1B, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr 2:6,110,438...6,116,443
Ensembl chr 2:6,102,353...6,126,951
JBrowse link
G RAP2B RAP2B, member of RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr13:93,308,112...93,308,663
Ensembl chr13:93,308,112...93,308,663
JBrowse link
G RAP2C RAP2C, member of RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:108,332,623...108,348,432
Ensembl chr  X:108,332,626...108,348,396
JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr 8:48,183,518...48,277,476
Ensembl chr 8:48,020,697...48,277,476
JBrowse link
G RAPGEF6 Rap guanine nucleotide exchange factor 6 NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chr 2:133,708,265...133,951,433 JBrowse link
G TJP1 tight junction protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:144,930,387...145,195,857
Ensembl chr 1:144,930,368...145,195,836
JBrowse link
G TJP2 tight junction protein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:222,474,518...222,612,989 JBrowse link
G TJP3 tight junction protein 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:74,938,153...74,971,431
Ensembl chr 2:74,938,152...74,971,555
JBrowse link
establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID4A AT-rich interaction domain 4A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5571188|PMID:23487765) Ensembl
MGI
PMID:23487765 GO_REF:0000107 MGI:5571188 NCBI chr 1:187,385,324...187,452,558
Ensembl chr 1:187,385,332...187,452,540
JBrowse link
G ARID4B AT-rich interaction domain 4B acts_upstream_of_or_within ISO (MGI:5571188|PMID:23487765) MGI PMID:23487765 MGI:5571188 NCBI chr14:55,924,333...56,082,209
Ensembl chr14:55,924,341...56,108,144
JBrowse link
G FLNA filamin A ISO RGD PMID:22872576 RGD:7207404 NCBI chr  X:124,889,934...124,915,000
Ensembl chr  X:124,890,142...124,917,171
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:22976294 RGD:8547721 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:22872576 RGD:7207404 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,398...56,173,795
JBrowse link
G RAB13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 4:95,705,093...95,709,942 JBrowse link
glandular epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FASN fatty acid synthase acts_upstream_of_or_within ISO (MGI:5630041|PMID:25565205) MGI PMID:25565205 MGI:5630041 NCBI chr12:922,405...937,560
Ensembl chr12:920,507...937,559
JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,442...22,085,674
JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chr13:12,336,387...12,507,688 JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,267...18,458,625
JBrowse link
glandular epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPAT4 glycerol-3-phosphate acyltransferase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3623167|PMID:16449762) Ensembl
MGI
PMID:16449762 GO_REF:0000107 MGI:3623167 NCBI chr17:10,705,998...10,724,486
Ensembl chr17:10,691,751...10,725,005
JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA2 actin alpha 2, smooth muscle involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:100,868,145...100,886,732
Ensembl chr14:100,867,733...100,886,713
JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619287|PMID:16498405) Ensembl
MGI
PMID:16498405 GO_REF:0000107 MGI:3619287 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367
JBrowse link
G GPR4 G protein-coupled receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3699048|PMID:17145776) Ensembl
MGI
PMID:17145776 GO_REF:0000107 MGI:3699048 NCBI chr 6:51,968,310...51,979,931
Ensembl chr 6:51,968,789...51,979,461
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15821257) Ensembl
UniProt
PMID:15821257 GO_REF:0000107
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,307,370...5,312,117
Ensembl chr12:5,307,383...5,311,990
JBrowse link
glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5647943|PMID:25361754) MGI PMID:25361754 MGI:5647943 NCBI chr 4:110,493,490...110,505,123
Ensembl chr 4:110,493,495...110,505,138
JBrowse link
G ASXL1 ASXL transcriptional regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:35,985,978...36,067,122
Ensembl chr17:35,985,535...36,067,122
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17442697) Ensembl
UniProt
PMID:17442697 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:19,591,248...19,629,659
Ensembl chr17:19,591,252...19,630,085
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 9:100,846,693...102,171,199
Ensembl chr 9:100,847,212...102,169,003
JBrowse link
G MYO1E myosin IE involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,677,545...112,902,005
Ensembl chr 1:112,677,810...112,901,999
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15821257) Ensembl
UniProt
PMID:15821257 GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,951,507...101,150,198
JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:45,248,325...45,271,892
Ensembl chr 6:45,248,317...45,271,550
JBrowse link
G PODXL podocalyxin like involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr18:17,444,339...17,494,507 JBrowse link
G WT1 WT1 transcription factor acts_upstream_of_or_within ISO (PMID:18618131) UniProt PMID:18618131 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
granulosa cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP15 bone morphogenetic protein 15 involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:44,613,122...44,620,575
Ensembl chr  X:44,613,122...44,620,575
JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5002772|PMID:21383503) MGI PMID:21383503 MGI:5002772 NCBI chr 9:77,509,342...77,549,545 JBrowse link
G CDH1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) MGI PMID:22766025 MGI:5449145 NCBI chr 6:18,075,487...18,155,986
Ensembl chr 6:18,075,480...18,155,986
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:35,101,304...35,151,832
Ensembl chr16:35,101,304...35,211,982
JBrowse link
G KLF5 Kruppel like factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5471906|PMID:23266329) Ensembl
MGI
PMID:23266329 GO_REF:0000107 MGI:5471906 NCBI chr11:45,370,009...45,386,673
Ensembl chr11:45,369,797...45,388,314
JBrowse link
G LOC100151870 gasdermin-C acts_upstream_of_or_within ISO (PMID:17350798) UniProt PMID:17350798 NCBI chr 4:10,724,754...10,744,226 JBrowse link
G MIR7-2 microRNA mir-7-2 acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr10:30,986,180...30,986,288
Ensembl chr10:30,986,180...30,986,288
JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4946569|PMID:21307095) Ensembl
MGI
PMID:21307095 GO_REF:0000107 MGI:4946569 NCBI chr 8:9,179,061...9,183,340
Ensembl chr 8:9,180,233...9,182,693
JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5014435|PMID:21670299) Ensembl
MGI
PMID:21670299 GO_REF:0000107 MGI:5014435 NCBI chr 1:72,309,096...72,335,474
Ensembl chr 1:72,311,880...72,335,466
JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4410300|PMID:19549527) Ensembl
MGI
PMID:19549527 GO_REF:0000107 MGI:4410300 NCBI chr 7:30,515,925...30,538,095
Ensembl chr 7:30,515,925...30,524,595
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5498602|PMID:23726973) Ensembl
MGI
PMID:23726973 GO_REF:0000107 MGI:5498602 NCBI chr 5:66,044,679...66,067,571
Ensembl chr 5:66,044,686...66,067,377
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
G YIPF6 Yip1 domain family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5437477|PMID:22802641) Ensembl
MGI
PMID:22802641 GO_REF:0000107 MGI:5437477 NCBI chr  X:54,661,771...54,687,988
Ensembl chr  X:54,661,829...54,687,982
JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4830408|PMID:20808783) Ensembl
MGI
PMID:20808783 GO_REF:0000107 MGI:4830408 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,181...190,674,850
JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1349338|PMID:10564089) Ensembl
MGI
PMID:10564089 GO_REF:0000107 MGI:1349338 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,640,031...105,660,601
JBrowse link
keratinocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BAF chromatin remodeling complex subunit BCL11B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839552|PMID:19092943) Ensembl
MGI
PMID:19092943 GO_REF:0000107 MGI:3839552 NCBI chr 7:120,205,008...120,295,737
Ensembl chr 7:120,205,008...120,295,815
JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) MGI PMID:24012369 MGI:5516520 NCBI chr13:39,789,259...39,938,751
Ensembl chr13:39,789,703...39,938,750
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5617064|PMID:25547114) Ensembl
MGI
PMID:25547114 GO_REF:0000107 MGI:5617064 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068
JBrowse link
G IFT74 intraflagellar transport 74 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5013962|PMID:21703454) Ensembl
MGI
PMID:21703454 GO_REF:0000107 MGI:5013962 NCBI chr 1:196,084,498...196,173,880
Ensembl chr 1:196,086,072...196,173,880
JBrowse link
G KDF1 keratinocyte differentiation factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5529391|PMID:24075906) Ensembl
MGI
PMID:24075906 GO_REF:0000107 MGI:5529391 NCBI chr 6:84,254,493...84,265,112
Ensembl chr 6:84,254,499...84,265,041
JBrowse link
G KRT10 keratin 10 acts_upstream_of_or_within ISO (MGI:5603985|PMID:24751727) MGI PMID:24751727 MGI:5603985 NCBI chr12:21,641,263...21,645,642
Ensembl chr12:21,641,271...21,645,636
JBrowse link
G KRT2 keratin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5603985|PMID:24751727) Ensembl
MGI
PMID:24751727 GO_REF:0000107 MGI:5603985 NCBI chr 5:17,984,316...17,992,092
Ensembl chr 5:17,984,316...17,992,092
JBrowse link
G LOC100512977 KDEL motif-containing protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,856,092...36,970,940
Ensembl chr 9:36,852,560...36,879,483
Ensembl chr 9:36,852,560...36,879,483
JBrowse link
G PALLD palladin, cytoskeletal associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5516520|PMID:24012369) Ensembl
MGI
PMID:24012369 GO_REF:0000107 MGI:5516520 NCBI chr14:20,678,456...21,020,125
Ensembl chr14:20,678,451...21,020,125
JBrowse link
G PLEC plectin involved_in ISO (MGI:3721038|PMID:17606998) MGI PMID:17606998 MGI:3721038 NCBI chr 4:696,355...753,859
Ensembl chr 4:685,456...753,859
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:3826689|PMID:18824566) MGI PMID:18824566 MGI:3826689 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,477
JBrowse link
G TFAP2C transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:3826689|PMID:18824566) MGI PMID:18824566 MGI:3826689 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BFSP1 beaded filament structural protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2673300|PMID:15037121)
GO_Central
MGI
PMID:15037121 PMID:21873635 MGI:2673300 NCBI chr17:25,933,743...25,966,940
Ensembl chr17:25,933,900...25,966,843
JBrowse link
G BFSP2 beaded filament structural protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) Ensembl
MGI
PMID:15037121 PMID:17065509 GO_REF:0000107 MGI:2673300 MGI:3717045 NCBI chr13:74,557,878...74,639,459
Ensembl chr13:74,557,930...74,639,455
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:5447585|PMID:23136392)
(MGI:3796810|PMID:18455718)
MGI PMID:18455718 PMID:23136392 MGI:3796810 MGI:5447585 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,710...131,579,703
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:3796810|PMID:18455718) MGI PMID:18455718 MGI:3796810 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,151...895,912
JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5447585|PMID:23136392) Ensembl
MGI
PMID:23136392 GO_REF:0000107 MGI:5447585 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,976
JBrowse link
G LOC100156107 gamma-crystallin B acts_upstream_of_or_within ISO (MGI:3776178|PMID:18172107) MGI PMID:18172107 MGI:3776178 NCBI chr15:111,267,071...111,268,898 JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:4888440|PMID:21118511) MGI PMID:21118511 MGI:4888440 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,298
JBrowse link
G TMOD1 tropomodulin 1 involved_in ISO (MGI:5475090|PMID:23144950) CACAO PMID:23144950 MGI:5475090 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,374,934...239,543,585
JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2673300|PMID:15037121) Ensembl
MGI
PMID:15037121 GO_REF:0000107 MGI:2673300 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,172
JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (MGI:3525751|PMID:15572692) UniProt PMID:15572692 MGI:3525751 NCBI chr15:106,776,627...106,903,889
Ensembl chr15:106,776,625...106,900,334
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,738,880...8,745,225
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:3655912|PMID:16799046)
(MGI:3775669|PMID:18056999)
MGI PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chr13:206,293,877...206,297,050 JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,251,465...75,279,364
Ensembl chr 6:75,251,467...75,279,314
JBrowse link
G LOC100156107 gamma-crystallin B acts_upstream_of_or_within ISO (MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090) MGI PMID:8626090 PMID:12426373 MGI:3691890 MGI:81294 NCBI chr15:111,267,071...111,268,898 JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5551670|PMID:24239381) Ensembl
MGI
PMID:24239381 GO_REF:0000107 MGI:5551670 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,379...34,779,251
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFB platelet derived growth factor subunit B involved_in ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3664526|PMID:16886065) Ensembl
MGI
PMID:16886065 GO_REF:0000107 MGI:3664526 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,284...31,771,220
JBrowse link
G NPHS2 NPHS2 stomatin family member, podocin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,217,734...121,236,214
Ensembl chr 9:121,216,496...121,236,178
JBrowse link
negative regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S1PR3 sphingosine-1-phosphate receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:659,314...674,969
Ensembl chr14:659,309...671,709
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (PMID:20048167) ARUK-UCL PMID:20048167 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
negative regulation of establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1A interleukin 1 alpha ISO RGD PMID:18057314 RGD:10046056 NCBI chr 3:43,718,320...43,731,668
Ensembl chr 3:43,718,368...43,731,119
JBrowse link
negative regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFTR CF transmembrane conductance regulator ISO RGD PMID:23178930 RGD:11567224 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950
JBrowse link
pancreatic A cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,971,567...29,001,200
JBrowse link
positive regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADD1 adducin 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 8:1,627,146...1,710,653
Ensembl chr 8:1,627,177...1,710,661
JBrowse link
G AKAP11 A-kinase anchoring protein 11 ISO RGD PMID:25188285 RGD:14348953 NCBI chr11:24,702,157...24,752,410
Ensembl chr11:24,704,881...24,752,244
JBrowse link
G CDH5 cadherin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:27,108,560...27,142,145
Ensembl chr 6:27,108,609...27,142,180
JBrowse link
G CLDN5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,032...51,163,482
JBrowse link
G F11R F11 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,425,101...89,447,889
Ensembl chr 4:89,425,039...89,449,932
JBrowse link
G IL4 interleukin 4 involved_in IMP (PMID:24280217) AgBase PMID:24280217 NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
JBrowse link
G PROC protein C, inactivator of coagulation factors Va and VIIIa involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:25,043,543...25,054,310
Ensembl chr15:25,032,622...25,056,595
JBrowse link
G S1PR2 sphingosine-1-phosphate receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,050,396...69,057,270
Ensembl chr 2:69,049,273...69,057,270
JBrowse link
positive regulation of establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 ISO RGD PMID:28880272 RGD:13703098 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G CFTR CF transmembrane conductance regulator ISO RGD PMID:22777528 RGD:11567213 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOQ adiponectin, C1Q and collagen domain containing involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,684...124,646,648
JBrowse link
positive regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAD BCL2 associated agonist of cell death involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,831,192...7,842,864
Ensembl chr 2:7,830,920...7,842,863
JBrowse link
G RFX3 regulatory factor X3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:218,340,427...218,647,389
Ensembl chr 1:218,340,446...218,647,389
JBrowse link
regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:11,289,607...11,348,557
Ensembl chr17:11,289,690...11,348,553
JBrowse link
G LOC110258578 interleukin-1 beta-like involved_in ISO (PMID:25816133) UniProt PMID:25816133
G PLCB1 phospholipase C beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:17,007,197...17,745,314
Ensembl chr17:17,007,261...17,745,312
JBrowse link
G PPP1R12A protein phosphatase 1 regulatory subunit 12A NOT|involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chr 5:101,490,282...101,639,456
Ensembl chr 5:101,490,277...101,639,442
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,073...64,331,909
JBrowse link
G VCL vinculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,700,143...76,811,875
Ensembl chr14:76,700,168...76,811,875
JBrowse link
G ZDHHC21 zinc finger DHHC-type palmitoyltransferase 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:207,836,490...207,913,463
Ensembl chr 1:207,836,573...207,912,546
JBrowse link
regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like involved_in ISO (MGI:4819446|PMID:20562852) UniProt PMID:20562852 MGI:4819446 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...46,025,165
JBrowse link
G CLOCK clock circadian regulator involved_in ISO (MGI:4819446|PMID:20562852) UniProt PMID:20562852 MGI:4819446 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G RHEB Ras homolog, mTORC1 binding involved_in ISO (PMID:19258434) CACAO PMID:19258434 NCBI chr18:5,779,439...5,821,839
Ensembl chr18:5,779,212...5,822,257
JBrowse link
Sertoli cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRM1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chr17:61,692,923...61,698,138
Ensembl chr17:61,692,945...61,698,146
JBrowse link
G AKAP9 A-kinase anchoring protein 9 acts_upstream_of_or_within ISO (MGI:5496944|PMID:23608191) MGI PMID:23608191 MGI:5496944 NCBI chr 9:71,895,615...72,054,898
Ensembl chr 9:71,895,630...72,054,897
JBrowse link
G ATRX ATRX chromatin remodeler acts_upstream_of_or_within ISO (MGI:4950648|PMID:21427128) MGI PMID:21427128 MGI:4950648 NCBI chr  X:61,584,028...61,872,341
Ensembl chr  X:61,584,848...61,872,288
JBrowse link
G CST3 cystatin C ISO RGD PMID:9432134 RGD:2306517 NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590
JBrowse link
G DMRT1 doublesex and mab-3 related transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5141538|PMID:21775990) Ensembl
MGI
PMID:21775990 GO_REF:0000107 MGI:5141538 NCBI chr 1:220,841,485...220,953,442
Ensembl chr 1:220,841,487...220,953,442
JBrowse link
G ESR1 estrogen receptor 1 ISO RGD PMID:24056172 RGD:7364870 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:24056172 RGD:7364870 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,722,164...193,906,565
JBrowse link
G FNDC3A fibronectin type III domain containing 3A acts_upstream_of_or_within ISO (MGI:50496|PMID:1759682), (MGI:59059|PMID:2164218) MGI PMID:1759682 PMID:2164218 MGI:50496 MGI:59059 NCBI chr11:18,564,280...18,757,742
Ensembl chr11:18,564,280...18,757,869
JBrowse link
G FSHR follicle stimulating hormone receptor acts_upstream_of_or_within ISO (MGI:3531357|PMID:14998910) MGI PMID:14998910 MGI:3531357 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G GATA1 GATA binding protein 1 ISO RGD PMID:9089398 RGD:2317794 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976
JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3623834|PMID:16484321) Ensembl
MGI
PMID:16484321 GO_REF:0000107 MGI:3623834 NCBI chr 2:123,313,445...123,401,386
Ensembl chr 2:123,313,448...123,402,731
JBrowse link
G MAP7 microtubule associated protein 7 acts_upstream_of_or_within ISO (MGI:1859100|PMID:10837026) MGI PMID:10837026 MGI:1859100 NCBI chr 1:27,606,021...27,782,754
Ensembl chr 1:27,606,036...27,782,747
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18660385 RGD:5684384 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,237,930
JBrowse link
G NUP210L nucleoporin 210 like acts_upstream_of_or_within ISO (MGI:4949532|PMID:20034429) MGI PMID:20034429 MGI:4949532 NCBI chr 4:95,573,974...95,697,196
Ensembl chr 4:95,573,722...95,697,196
JBrowse link
G SDC1 syndecan 1 ISO RGD PMID:12453641 RGD:1643137 NCBI chr 3:117,987,585...118,011,886
Ensembl chr 3:117,987,557...118,011,885
JBrowse link
G SOX3 SRY-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:11875113) UniProt PMID:11875113 NCBI chr  X:115,017,704...115,020,601
Ensembl chr  X:115,019,232...115,020,578
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11875113)
(MGI:3836884|PMID:19124014)
Ensembl
UniProt
MGI
PMID:11875113 PMID:19124014 GO_REF:0000107 MGI:3836884 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,710,043...40,830,737
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3836884|PMID:19124014) Ensembl
MGI
PMID:19124014 GO_REF:0000107 MGI:3836884 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G WT1 WT1 transcription factor acts_upstream_of_or_within ISO (MGI:3612377|PMID:16418481) MGI PMID:16418481 MGI:3612377 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G BMP5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,344,924...25,468,430
Ensembl chr 7:25,344,822...25,470,470
JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,058,817...5,208,868
Ensembl chr 7:5,058,817...5,211,316
JBrowse link
G CDH2 cadherin 2 involved_in ISO (MGI:6216737|PMID:26750727) UniProt PMID:26750727 MGI:6216737 NCBI chr 6:112,396,713...112,629,073
Ensembl chr 6:112,396,721...112,628,432
JBrowse link
G CDK6 cyclin dependent kinase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,510,858...72,765,631
Ensembl chr 9:72,518,101...72,764,129
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,231...211,344
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,503
JBrowse link
G INSM1 INSM transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:3655758|PMID:16951258) MGI PMID:16951258 MGI:3655758 NCBI chr17:28,379,529...28,382,554 JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (MGI:3775688|PMID:17804764) MGI PMID:17804764 MGI:3775688 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
JBrowse link
G NKX2-2 NK2 homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3761395|PMID:17456846)
(MGI:3703458|PMID:17202186)
Ensembl
MGI
PMID:17202186 PMID:17456846 GO_REF:0000107 MGI:3703458 MGI:3761395 NCBI chr17:29,275,656...29,279,572
Ensembl chr17:29,275,682...29,278,606
JBrowse link
G NKX6-1 NK6 homeobox 1 ISO RGD PMID:9603781 RGD:2326025 NCBI chr 8:134,137,064...134,143,524
Ensembl chr 8:134,138,296...134,145,219
JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,429,931...39,532,583
JBrowse link
G SIDT2 SID1 transmembrane family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5529865|PMID:23776622) Ensembl
MGI
PMID:23776622 GO_REF:0000107 MGI:5529865 NCBI chr 9:44,543,648...44,559,717
Ensembl chr 9:44,543,701...44,559,716
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4833770|PMID:20185815) Ensembl
MGI
PMID:20185815 GO_REF:0000107 MGI:4833770 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,734...19,479,374
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3663526|PMID:16246260) Ensembl
MGI
PMID:16246260 GO_REF:0000107 MGI:3663526 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
type B pancreatic cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RFX3 regulatory factor X3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:218,340,427...218,647,389
Ensembl chr 1:218,340,446...218,647,389
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16534
    developmental process 6336
      anatomical structure development 5874
        cell development 2345
          epithelial cell development 282
            Sertoli cell development + 28
            auditory receptor cell development + 32
            columnar/cuboidal epithelial cell development + 48
            endothelial cell development + 82
            epithelial cell maturation + 19
            epithelial cell morphogenesis + 48
            glomerular epithelial cell development + 14
            glomerular epithelial cell fate commitment + 0
            glomerular mesangial cell development + 5
            granulosa cell development 1
            keratinocyte development + 16
            lens fiber cell development + 15
            ovarian follicle cell development + 0
Path 2
Term Annotations click to browse term
  biological_process 16534
    developmental process 6336
      anatomical structure development 5874
        tissue development 1994
          epithelium development 1224
            epithelial cell differentiation 673
              epithelial cell development 282
                Sertoli cell development + 28
                auditory receptor cell development + 32
                columnar/cuboidal epithelial cell development + 48
                endothelial cell development + 82
                epithelial cell maturation + 19
                epithelial cell morphogenesis + 48
                glomerular epithelial cell development + 14
                glomerular epithelial cell fate commitment + 0
                glomerular mesangial cell development + 5
                granulosa cell development 1
                keratinocyte development + 16
                lens fiber cell development + 15
                ovarian follicle cell development + 0
paths to the root