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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell development
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Accession:GO:0002064 term browser browse the term
Definition:The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.


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epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamtsl4 ADAMTS like 4 acts_upstream_of_or_within ISO (MGI:5698751|PMID:26405179) MGI PMID:26405179 MGI:5698751 NCBI chrNW_004955413:258,078...269,324
Ensembl chrNW_004955413:257,915...269,325
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:87365|PMID:9155011) MGI PMID:9155011 MGI:87365 NCBI chrNW_004955472:2,490,649...2,536,053
Ensembl chrNW_004955472:2,490,661...2,536,317
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:15358596 RGD:1600768 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
G E2f4 E2F transcription factor 4 acts_upstream_of_or_within ISO (MGI:3710305|PMID:17383628) MGI PMID:17383628 MGI:3710305 NCBI chrNW_004955484:9,421,396...9,427,826
Ensembl chrNW_004955484:9,421,396...9,427,825
JBrowse link
G Esr1 estrogen receptor 1 acts_upstream_of_or_within ISO (MGI:3839071|PMID:18755802) MGI PMID:18755802 MGI:3839071 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353
JBrowse link
G Hydin HYDIN axonemal central pair apparatus protein acts_upstream_of_or_within ISO (MGI:3793384|PMID:18250199) MGI PMID:18250199 MGI:3793384 NCBI chrNW_004955484:3,567,896...3,948,807
Ensembl chrNW_004955484:3,567,396...3,949,261
JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO (MGI:2159585|PMID:11872843) MGI PMID:11872843 MGI:2159585 NCBI chrNW_004955476:11,108,826...11,135,697 JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO (MGI:3723392|PMID:16472605) MGI PMID:16472605 MGI:3723392 NCBI chrNW_004955409:2,181,364...2,214,636
Ensembl chrNW_004955409:2,181,346...2,207,888
JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO (MGI:3723392|PMID:16472605) MGI PMID:16472605 MGI:3723392 NCBI chrNW_004955402:41,782,281...41,839,782
Ensembl chrNW_004955402:41,782,281...41,839,782
JBrowse link
G Pax6 paired box 6 ISO corneal epithelial cells RGD PMID:19393751 RGD:8552646 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Slc4a5 solute carrier family 4 member 5 acts_upstream_of_or_within ISO (MGI:5292606|PMID:21705333) MGI PMID:21705333 MGI:5292606 NCBI chrNW_004955424:11,426,020...11,537,141
Ensembl chrNW_004955424:11,449,819...11,535,379
JBrowse link
G Slc9a4 solute carrier family 9 member A4 acts_upstream_of_or_within ISO (MGI:3578697|PMID:15684419) MGI PMID:15684419 MGI:3578697 NCBI chrNW_004955470:7,936,677...7,989,946
Ensembl chrNW_004955470:7,936,532...7,984,777
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:3761221|PMID:16601749)
(MGI:5433834|PMID:21127502)
MGI PMID:16601749 PMID:21127502 MGI:3761221 MGI:5433834 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786
JBrowse link
apical constriction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C involved_in ISO (PMID:30948426) UniProt PMID:30948426 NCBI chrNW_004955438:13,585,469...13,708,170 JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:4438998|PMID:20103536) MGI PMID:20103536 MGI:4438998 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Frmd6 FERM domain containing 6 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955409:11,262,456...11,420,892
Ensembl chrNW_004955409:11,262,204...11,302,146
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955462:2,930,171...3,457,358
Ensembl chrNW_004955462:2,849,181...3,457,478
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 acts_upstream_of_or_within ISO (MGI:5086051|PMID:21685893) MGI PMID:21685893 MGI:5086051 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clrn1 clarin 1 acts_upstream_of_or_within ISO (MGI:3849925|PMID:19414487) MGI PMID:19414487 MGI:3849925 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3527944|PMID:15630379) MGI PMID:15630379 MGI:3527944 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (MGI:5784951|PMID:26084842) MGI PMID:26084842 MGI:5784951 NCBI chrNW_004955422:14,212,563...14,544,556
Ensembl chrNW_004955422:14,212,553...14,544,556
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
G Tmc1 transmembrane channel like 1 acts_upstream_of_or_within ISO (MGI:5320864|PMID:22105175) MGI PMID:22105175 MGI:5320864 NCBI chrNW_004955434:398,734...500,378
Ensembl chrNW_004955434:398,829...529,810
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (MGI:4413621|PMID:19936227) MGI PMID:19936227 MGI:4413621 NCBI chrNW_004955404:22,738,080...22,744,601
Ensembl chrNW_004955404:22,737,974...22,745,046
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector acts_upstream_of_or_within ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004955424:20,723,592...21,114,801 JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:3709803|PMID:11875276) MGI PMID:11875276 MGI:3709803 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Cdh23 cadherin related 23 acts_upstream_of_or_within ISO (MGI:75953|PMID:7610888), (MGI:81497|PMID:8790740), (MGI:86134|PMID:9039475)
(MGI:1929001|PMID:11138008), (MGI:3686545|PMID:17050716), (MGI:5468200|PMID:23217710)
(MGI:3526751|PMID:15537665)
(MGI:1933915|PMID:11322776)
(MGI:3625226|PMID:12121736)
MGI PMID:7610888 PMID:8790740 PMID:9039475 PMID:11138008 PMID:11322776 PMID:12121736 PMID:15537665 PMID:17050716 PMID:23217710 MGI:1929001 MGI:1933915 MGI:3526751 MGI:3625226 MGI:3686545 MGI:5468200 MGI:75953 MGI:81497 MGI:86134 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819
JBrowse link
G Clic5 chloride intracellular channel 5 acts_upstream_of_or_within ISO (MGI:3663248|PMID:17021174) MGI PMID:17021174 MGI:3663248 NCBI chrNW_004955437:11,053,885...11,118,150
Ensembl chrNW_004955437:11,053,885...11,118,255
JBrowse link
G Clrn1 clarin 1 acts_upstream_of_or_within ISO (MGI:3849925|PMID:19414487), (MGI:4353469|PMID:19423712) MGI PMID:19414487 PMID:19423712 MGI:3849925 MGI:4353469 NCBI chrNW_004955448:2,062,647...2,106,548
Ensembl chrNW_004955448:2,062,647...2,106,548
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 acts_upstream_of_or_within ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004955415:8,203,968...8,220,148
Ensembl chrNW_004955415:8,203,968...8,220,148
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 acts_upstream_of_or_within ISO (MGI:3578102|PMID:15905332)
(MGI:3759710|PMID:17876667), (MGI:5468200|PMID:23217710)
MGI PMID:15905332 PMID:17876667 PMID:23217710 MGI:3578102 MGI:3759710 MGI:5468200 NCBI chrNW_004955437:3,644,448...3,650,688 JBrowse link
G Myo3a myosin IIIA involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004955429:3,172,457...3,358,688
Ensembl chrNW_004955429:3,172,996...3,358,688
JBrowse link
G Myo3b myosin IIIB involved_in ISO (MGI:5766107|PMID:26754646) MGI PMID:26754646 MGI:5766107 NCBI chrNW_004955449:4,128,816...4,546,651
Ensembl chrNW_004955449:4,129,823...4,546,296
JBrowse link
G Myo7a myosin VIIA acts_upstream_of_or_within ISO (MGI:2156358|PMID:11753415)
(MGI:3625226|PMID:12121736)
(MGI:3686545|PMID:17050716)
MGI PMID:11753415 PMID:12121736 PMID:17050716 MGI:2156358 MGI:3625226 MGI:3686545 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Pcdh15 protocadherin related 15 acts_upstream_of_or_within ISO (MGI:5468200|PMID:23217710)
(MGI:3654702|PMID:16887306)
(MGI:3619110|PMID:11124469)
(MGI:1928787|PMID:10978835)
(MGI:3526751|PMID:15537665)
MGI PMID:10978835 PMID:11124469 PMID:15537665 PMID:16887306 PMID:23217710 MGI:1928787 MGI:3526751 MGI:3619110 MGI:3654702 MGI:5468200 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Pdzd7 PDZ domain containing 7 acts_upstream_of_or_within ISO (MGI:5565635|PMID:24334608) MGI PMID:24334608 MGI:5565635 NCBI chrNW_004955485:9,166,721...9,183,129
Ensembl chrNW_004955485:9,166,745...9,182,427
JBrowse link
G Pls1 plastin 1 involved_in ISO (MGI:5608770|PMID:25124451) UniProt PMID:25124451 MGI:5608770 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chrNW_004955483:2,048,236...2,257,078
Ensembl chrNW_004955483:2,048,324...2,256,589
JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4439427|PMID:20215345) MGI PMID:20215345 MGI:4439427 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 acts_upstream_of_or_within ISO (MGI:5578076|PMID:24920589) MGI PMID:24920589 MGI:5578076 NCBI chrNW_004955553:1,639,267...1,656,850
Ensembl chrNW_004955553:1,639,267...1,656,850
JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (MGI:1344578|PMID:10466888), (MGI:3700629|PMID:10464373) MGI PMID:10464373 PMID:10466888 MGI:1344578 MGI:3700629 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Strc stereocilin acts_upstream_of_or_within
involved_in
ISO (MGI:3818235|PMID:18849963)
(MGI:5430850|PMID:21165971)
MGI
UniProt
PMID:18849963 PMID:21165971 MGI:3818235 MGI:5430850 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link
G Tprn taperin acts_upstream_of_or_within ISO (MGI:6278501|PMID:30380417) MGI PMID:30380417 MGI:6278501 NCBI chrNW_004955513:5,196,871...5,205,945
Ensembl chrNW_004955513:5,197,280...5,203,445
JBrowse link
G Whrn whirlin acts_upstream_of_or_within ISO (MGI:5796227|PMID:27117407) MGI PMID:27117407 MGI:5796227 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link
central nervous system vasculogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3821408|PMID:19023080) MGI PMID:19023080 MGI:3821408 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Eng endoglin involved_in ISO (PMID:7894484) BHF-UCL PMID:7894484 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694
JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:5492189|PMID:23625008) UniProt PMID:23625008 MGI:5492189 NCBI chrNW_004955424:28,061,346...28,125,838 JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (MGI:3821408|PMID:19023080) MGI PMID:19023080 MGI:3821408 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (MGI:3821408|PMID:19023080) MGI PMID:19023080 MGI:3821408 NCBI chrNW_004955413:30,146,185...30,185,693
Ensembl chrNW_004955413:30,144,869...30,181,791
JBrowse link
columnar/cuboidal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ros1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in ISO (MGI:80739|PMID:8675006) UniProt PMID:8675006 MGI:80739 NCBI chrNW_004955436:528,038...636,194
Ensembl chrNW_004955436:524,854...636,338
JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO (MGI:3610718|PMID:16249236) MGI PMID:16249236 MGI:3610718 NCBI chrNW_004955433:1,135,589...1,423,449
Ensembl chrNW_004955433:1,358,444...1,422,498
JBrowse link
columnar/cuboidal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (MGI:6443509|PMID:31336344) MGI PMID:31336344 MGI:6443509 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
corneocyte desquamation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP binding cassette subfamily A member 12 involved_in ISO (PMID:19179616)
(MGI:6161848|PMID:27551807)
UniProt PMID:19179616 PMID:27551807 MGI:6161848 NCBI chrNW_004955457:885,941...1,062,713
Ensembl chrNW_004955457:879,510...1,062,713
JBrowse link
G Cdsn corneodesmosin involved_in ISO (PMID:26014679) CAFA PMID:26014679 NCBI chrNW_004955583:959,544...968,632
Ensembl chrNW_004955583:958,668...964,149
JBrowse link
corneocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1l2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chrNW_004955442:15,028,168...15,031,110
Ensembl chrNW_004955442:15,028,168...15,031,110
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
endothelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO (MGI:3837878|PMID:19151727) MGI PMID:19151727 MGI:3837878 NCBI chrNW_004955456:7,232,224...7,251,012
Ensembl chrNW_004955456:7,227,667...7,256,206
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3698597|PMID:16373599) MGI PMID:16373599 MGI:3698597 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Heg1 heart development protein with EGF like domains 1 acts_upstream_of_or_within ISO (MGI:3837878|PMID:19151727) MGI PMID:19151727 MGI:3837878 NCBI chrNW_004955427:24,035,193...24,115,483 JBrowse link
G Vezf1 vascular endothelial zinc finger 1 acts_upstream_of_or_within ISO (MGI:3581991|PMID:15882861) MGI PMID:15882861 MGI:3581991 NCBI chrNW_004955451:5,014,310...5,031,080
Ensembl chrNW_004955451:5,014,218...5,032,225
JBrowse link
endothelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef26 Rho guanine nucleotide exchange factor 26 acts_upstream_of_or_within ISO (MGI:5486234|PMID:23372835) MGI PMID:23372835 MGI:5486234 NCBI chrNW_004955448:5,494,571...5,627,107
Ensembl chrNW_004955448:5,494,571...5,627,107
JBrowse link
G Clic4 chloride intracellular channel 4 acts_upstream_of_or_within ISO (MGI:3837628|PMID:19197003) MGI PMID:19197003 MGI:3837628 NCBI chrNW_004955452:4,479,783...4,534,115
Ensembl chrNW_004955452:4,479,783...4,534,115
JBrowse link
G Cnmd chondromodulin acts_upstream_of_or_within ISO (MGI:2656472|PMID:12714610) MGI PMID:12714610 MGI:2656472 NCBI chrNW_004955404:50,864,017...50,889,249
Ensembl chrNW_004955404:50,863,651...50,889,249
JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within ISO (MGI:3046127|PMID:15188432) MGI PMID:15188432 MGI:3046127 NCBI chrNW_004955407:42,091,211...42,131,343
Ensembl chrNW_004955407:42,091,211...42,131,343
JBrowse link
G Heg1 heart development protein with EGF like domains 1 acts_upstream_of_or_within ISO (MGI:3837878|PMID:19151727) MGI PMID:19151727 MGI:3837878 NCBI chrNW_004955427:24,035,193...24,115,483 JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within ISO (MGI:3797428|PMID:18483557) MGI PMID:18483557 MGI:3797428 NCBI chrNW_004955410:28,887,952...28,893,515
Ensembl chrNW_004955410:28,890,171...28,893,515
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:3759000|PMID:17717145) MGI PMID:17717145 MGI:3759000 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:4940123|PMID:21285373) MGI PMID:21285373 MGI:4940123 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase involved_in ISO (PMID:14500721) UniProt PMID:14500721 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
G Notch4 notch receptor 4 ISO RGD PMID:10964583 RGD:1304484 NCBI chrNW_004955437:658,076...679,338 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3723364|PMID:17563397) MGI PMID:17563397 MGI:3723364 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188
JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within ISO (MGI:3618677|PMID:16467571) MGI PMID:16467571 MGI:3618677 NCBI chrNW_004955456:16,082,424...16,090,773
Ensembl chrNW_004955456:16,082,437...16,093,389
JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:14500721) UniProt PMID:14500721 NCBI chrNW_004955403:46,969,837...46,982,075
Ensembl chrNW_004955403:46,969,677...46,982,191
JBrowse link
G Tnmd tenomodulin acts_upstream_of_or_within ISO (MGI:2656472|PMID:12714610) MGI PMID:12714610 MGI:2656472 NCBI chrNW_004955503:6,732,791...6,750,693
Ensembl chrNW_004955503:6,732,733...6,750,717
JBrowse link
epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fem1b fem-1 homolog B acts_upstream_of_or_within ISO (MGI:3809320|PMID:18816836) MGI PMID:18816836 MGI:3809320 NCBI chrNW_004955450:7,834,487...7,847,334
Ensembl chrNW_004955450:7,834,487...7,847,334
JBrowse link
G Gja1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3624198|PMID:16624854) MGI PMID:16624854 MGI:3624198 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 acts_upstream_of_or_within ISO (MGI:3625254|PMID:11223304) MGI PMID:11223304 MGI:3625254 NCBI chrNW_004955407:33,807,581...33,814,356 JBrowse link
G Pgr progesterone receptor acts_upstream_of_or_within ISO (MGI:3028786|PMID:14765981) MGI PMID:14765981 MGI:3028786 NCBI chrNW_004955412:4,643,839...4,693,478 JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:5299935|PMID:22071110) UniProt PMID:22071110 MGI:5299935 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Tfcp2l1 transcription factor CP2 like 1 acts_upstream_of_or_within ISO (MGI:3703120|PMID:17079272) MGI PMID:17079272 MGI:3703120 NCBI chrNW_004955459:8,657,188...8,716,878
Ensembl chrNW_004955459:8,657,188...8,717,133
JBrowse link
G Tmem79 transmembrane protein 79 involved_in ISO (MGI:5518480|PMID:24060273) UniProt PMID:24060273 MGI:5518480 NCBI chrNW_004955545:2,420,594...2,436,485
Ensembl chrNW_004955545:2,420,592...2,436,485
JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:3768452|PMID:16362047) MGI PMID:16362047 MGI:3768452 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
epithelial cell maturation involved in prostate gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO (MGI:3047056|PMID:15187231) MGI PMID:15187231 MGI:3047056 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Fem1b fem-1 homolog B acts_upstream_of_or_within ISO (MGI:3809320|PMID:18816836) MGI PMID:18816836 MGI:3809320 NCBI chrNW_004955450:7,834,487...7,847,334
Ensembl chrNW_004955450:7,834,487...7,847,334
JBrowse link
G Foxa1 forkhead box A1 acts_upstream_of_or_within ISO (MGI:3603077|PMID:15987773) MGI PMID:15987773 MGI:3603077 NCBI chrNW_004955409:23,598,127...23,599,827
Ensembl chrNW_004955409:23,598,127...23,599,461
JBrowse link
G Hoxb13 homeobox B13 acts_upstream_of_or_within ISO (MGI:2653645|PMID:12668621) MGI PMID:12668621 MGI:2653645 NCBI chrNW_004955451:12,536,415...12,538,169
Ensembl chrNW_004955451:12,536,415...12,538,169
JBrowse link
epithelial cell maturation involved in salivary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:3768452|PMID:16362047) MGI PMID:16362047 MGI:3768452 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
epithelial cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor acts_upstream_of_or_within ISO (MGI:5050497|PMID:21084446) MGI PMID:21084446 MGI:5050497 NCBI chrNW_004955475:7,013,960...7,192,473
Ensembl chrNW_004955475:7,013,960...7,186,069
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO (MGI:3838423|PMID:19251658) MGI PMID:19251658 MGI:3838423 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) MGI PMID:22766025 MGI:5449145 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967
JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) MGI PMID:24385485 MGI:5562592 NCBI chrNW_004955589:855,715...881,123
Ensembl chrNW_004955589:856,618...881,150
JBrowse link
G Dact2 dishevelled binding antagonist of beta catenin 2 involved_in ISO (MGI:4833906|PMID:20685821) UniProt PMID:20685821 MGI:4833906 NCBI chrNW_004955411:4,972,080...4,976,011 JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Fat1 FAT atypical cadherin 1 involved_in ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chrNW_004955403:22,502,625...22,618,513
Ensembl chrNW_004955403:22,502,625...22,619,211
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) MGI PMID:24012369 MGI:5516520 NCBI chrNW_004955430:7,680,394...7,832,124
Ensembl chrNW_004955430:7,680,394...7,832,124
JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in ISO (PMID:25152456)
(MGI:5499697|PMID:22696678)
UniProt PMID:22696678 PMID:25152456 MGI:5499697 NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
JBrowse link
G Hrh2 histamine receptor H2 acts_upstream_of_or_within ISO (MGI:1860000|PMID:10862789) MGI PMID:10862789 MGI:1860000 NCBI chrNW_004955408:28,186,316...28,225,146
Ensembl chrNW_004955408:28,186,249...28,229,411
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO (MGI:5529185|PMID:24006281) MGI PMID:24006281 MGI:5529185 NCBI chrNW_004955425:16,343,314...16,552,552
Ensembl chrNW_004955425:16,344,141...16,493,527
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:5467663|PMID:23201579) MGI PMID:23201579 MGI:5467663 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:32698519) UniProt PMID:32698519 NCBI chrNW_004955411:5,988,100...6,434,369
Ensembl chrNW_004955411:5,990,316...6,432,301
JBrowse link
G Pof1b POF1B actin binding protein involved_in ISO (PMID:21940798) UniProt PMID:21940798 NCBI chrNW_004955529:4,137,746...4,224,542
Ensembl chrNW_004955529:4,136,480...4,224,537
JBrowse link
G Rab25 RAB25, member RAS oncogene family involved_in ISO (MGI:5499697|PMID:22696678) UniProt PMID:22696678 MGI:5499697 NCBI chrNW_004955545:2,243,237...2,250,507
Ensembl chrNW_004955545:2,242,944...2,252,840
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (MGI:4430014|PMID:20016102) MGI PMID:20016102 MGI:4430014 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Rilpl1 Rab interacting lysosomal protein like 1 involved_in ISO (MGI:5507904|PMID:23264467) UniProt PMID:23264467 MGI:5507904 NCBI chrNW_004955482:5,424,898...5,455,145
Ensembl chrNW_004955482:5,424,898...5,458,632
JBrowse link
G Rilpl2 Rab interacting lysosomal protein like 2 involved_in ISO (MGI:5507904|PMID:23264467) UniProt PMID:23264467 MGI:5507904 NCBI chrNW_004955482:5,470,965...5,482,600
Ensembl chrNW_004955482:5,470,537...5,485,353
JBrowse link
G Rnase10 ribonuclease A family member 10 (inactive) acts_upstream_of_or_within ISO (MGI:5050497|PMID:21084446) MGI PMID:21084446 MGI:5050497 NCBI chrNW_004955550:1,326,203...1,331,558
Ensembl chrNW_004955550:1,328,294...1,331,558
JBrowse link
G Sipa1l3 signal induced proliferation associated 1 like 3 involved_in ISO (PMID:26231217)
(MGI:5697095|PMID:26231217)
UniProt PMID:26231217 MGI:5697095 NCBI chrNW_004955468:1,212,102...1,438,527
Ensembl chrNW_004955468:1,212,102...1,438,527
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (MGI:5297312|PMID:21991385) MGI PMID:21991385 MGI:5297312 NCBI chrNW_004955490:7,837,846...7,871,540
Ensembl chrNW_004955490:7,837,397...7,871,588
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead like transcription factor 2 acts_upstream_of_or_within ISO (MGI:5634845|PMID:25758223) MGI PMID:25758223 MGI:5634845 NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 acts_upstream_of_or_within ISO (MGI:4360135|PMID:19592578) MGI PMID:19592578 MGI:4360135 NCBI chrNW_004955468:1,142,718...1,181,210
Ensembl chrNW_004955468:1,143,118...1,169,632
JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO (MGI:4360135|PMID:19592578) MGI PMID:19592578 MGI:4360135 NCBI chrNW_004955412:31,091,313...31,129,050
Ensembl chrNW_004955412:31,090,504...31,129,050
JBrowse link
establishment of blood-nerve barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO (MGI:2385816|PMID:9734405) MGI PMID:9734405 MGI:2385816 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:22733753 RGD:11341802 NCBI chrNW_004955420:17,798,974...17,815,049
Ensembl chrNW_004955420:17,798,974...17,815,205
JBrowse link
G Dmd dystrophin acts_upstream_of_or_within ISO (MGI:3612931|PMID:12673830) MGI PMID:12673830 MGI:3612931 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 acts_upstream_of_or_within ISO (MGI:4437139|PMID:20181608) MGI PMID:20181608 MGI:4437139 NCBI chrNW_004955545:2,705,903...2,710,763
Ensembl chrNW_004955545:2,709,013...2,710,588
JBrowse link
G Ren renin NOT|acts_upstream_of_or_within ISO (MGI:1351364|PMID:10617578) MGI PMID:10617578 MGI:1351364 NCBI chrNW_004955406:40,016,624...40,026,286
Ensembl chrNW_004955406:40,016,630...40,026,286
JBrowse link
establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn5 claudin 5 involved_in ISO (PMID:24280217) AgBase PMID:24280217 NCBI chrNW_004955442:18,509,501...18,511,267
Ensembl chrNW_004955442:18,509,676...18,510,332
JBrowse link
G Ezr ezrin involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955439:3,701,722...3,740,345
Ensembl chrNW_004955439:3,703,013...3,740,345
JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:20826780) UniProt PMID:20826780 NCBI chrNW_004955425:24,050,901...24,054,039 JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:23073616) UniProt PMID:23073616 NCBI chrNW_004955575:115,734...135,568
Ensembl chrNW_004955575:115,752...139,463
JBrowse link
G Msn moesin involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955475:5,301,856...5,370,378
Ensembl chrNW_004955475:5,301,910...5,370,691
JBrowse link
G Myadm myeloid associated differentiation marker involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955604:280,977...284,381
Ensembl chrNW_004955604:280,977...284,381
JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chrNW_004955414:18,765,591...18,826,717
Ensembl chrNW_004955414:18,735,822...18,827,236
JBrowse link
G Pde4d phosphodiesterase 4D involved_in ISO PMID:20139324 UniProt PMID:20139324 RGD:8553884 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:7589563) ARUK-UCL PMID:7589563 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188
JBrowse link
G Ppp1r16b protein phosphatase 1 regulatory subunit 16B involved_in
acts_upstream_of_or_within
ISO (PMID:18586956)
(MGI:5604907|PMID:21907835)
GO_Central
MGI
PMID:18586956 PMID:21907835 MGI:5604907 NCBI chrNW_004955445:17,864,103...17,961,295
Ensembl chrNW_004955445:17,863,556...17,962,052
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004955435:15,090,521...15,171,397
Ensembl chrNW_004955435:15,150,827...15,171,397
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004955458:15,110,709...15,121,868
Ensembl chrNW_004955458:15,080,778...15,123,203
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004955513:1,224,418...1,328,176
Ensembl chrNW_004955513:1,226,205...1,315,922
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004955471:12,670,837...12,838,910
Ensembl chrNW_004955471:12,670,764...12,815,430
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 involved_in ISO (PMID:21840392) UniProt PMID:21840392 NCBI chrNW_004955500:6,655,056...6,674,311
Ensembl chrNW_004955500:6,655,056...6,674,311
JBrowse link
G Rdx radixin involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chrNW_004955412:12,100,436...12,184,444
Ensembl chrNW_004955412:12,100,359...12,172,545
JBrowse link
G Robo4 roundabout guidance receptor 4 involved_in ISO (PMID:30455415) UniProt PMID:30455415 NCBI chrNW_004955412:25,954,906...25,967,707
Ensembl chrNW_004955412:25,954,085...25,967,723
JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in ISO (PMID:18065521) UniProt PMID:18065521 NCBI chrNW_004955528:204,729...206,772 JBrowse link
establishment of endothelial blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp3 forkhead box P3 ISO RGD PMID:31027862 RGD:38549575 NCBI chrNW_004955543:731,707...742,606
Ensembl chrNW_004955543:731,707...742,606
JBrowse link
establishment of endothelial intestinal barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955439:14,324,910...14,428,846
Ensembl chrNW_004955439:14,326,793...14,428,850
JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:22684624 RGD:11341733 NCBI chrNW_004955420:17,798,974...17,815,049
Ensembl chrNW_004955420:17,798,974...17,815,205
JBrowse link
G F11r F11 receptor involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955468:12,764,968...12,785,956
Ensembl chrNW_004955468:12,765,874...12,785,929
JBrowse link
G Fasn fatty acid synthase acts_upstream_of_or_within ISO (MGI:5630041|PMID:25565205) MGI PMID:25565205 MGI:5630041 NCBI chrNW_004955506:1,063,002...1,079,939
Ensembl chrNW_004955506:1,063,002...1,079,939
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:10201790 RGD:11520782 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (MGI:5306517|PMID:22155109) MGI PMID:22155109 MGI:5306517 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138
JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S acts_upstream_of_or_within ISO (MGI:5550154|PMID:24385580) MGI PMID:24385580 MGI:5550154 NCBI chrNW_004955495:3,943,075...3,991,361
Ensembl chrNW_004955495:3,943,170...3,990,927
JBrowse link
G Rab1a RAB1A, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955424:19,393,589...19,421,373
Ensembl chrNW_004955424:19,393,589...19,421,373
JBrowse link
G Rab1b RAB1B, member RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955422:19,039,741...19,047,088
Ensembl chrNW_004955422:19,039,632...19,047,088
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955448:4,668,477...4,671,629 JBrowse link
G Rap2c RAP2C, member of RAS oncogene family involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955473:2,709,407...2,723,453
Ensembl chrNW_004955473:2,709,407...2,723,756
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955471:12,670,837...12,838,910
Ensembl chrNW_004955471:12,670,764...12,815,430
JBrowse link
G Rapgef6 Rap guanine nucleotide exchange factor 6 NOT|involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955408:2,902,530...3,109,273 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955416:28,640,807...28,869,717
Ensembl chrNW_004955416:28,654,905...28,870,555
JBrowse link
G Tjp2 tight junction protein 2 involved_in ISO (PMID:23885123) UniProt PMID:23885123 NCBI chrNW_004955434:3,781,368...3,923,240 JBrowse link
establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid4a AT-rich interaction domain 4A acts_upstream_of_or_within ISO (MGI:5571188|PMID:23487765) MGI PMID:23487765 MGI:5571188 NCBI chrNW_004955466:12,017,588...12,087,667 JBrowse link
G Arid4b AT-rich interaction domain 4B acts_upstream_of_or_within ISO (MGI:5571188|PMID:23487765) MGI PMID:23487765 MGI:5571188 NCBI chrNW_004955492:4,593,335...4,730,073
Ensembl chrNW_004955492:4,593,335...4,730,073
JBrowse link
G Flna filamin A ISO RGD PMID:22872576 RGD:7207404 NCBI chrNW_004955580:874,233...895,172
Ensembl chrNW_004955580:874,233...895,232
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:22976294 RGD:8547721 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:22872576 RGD:7207404 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISO PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chrNW_004955545:590,021...594,191 JBrowse link
glandular epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fasn fatty acid synthase acts_upstream_of_or_within ISO (MGI:5630041|PMID:25565205) MGI PMID:25565205 MGI:5630041 NCBI chrNW_004955506:1,063,002...1,079,939
Ensembl chrNW_004955506:1,063,002...1,079,939
JBrowse link
G Rara retinoic acid receptor alpha acts_upstream_of_or_within ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
JBrowse link
G Rarb retinoic acid receptor beta acts_upstream_of_or_within ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chrNW_004955430:17,067,536...17,457,558
Ensembl chrNW_004955430:17,295,174...17,460,045
JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
glandular epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpat4 glycerol-3-phosphate acyltransferase 4 acts_upstream_of_or_within ISO (MGI:3623167|PMID:16449762) MGI PMID:16449762 MGI:3623167 NCBI chrNW_004955536:1,266,920...1,313,765
Ensembl chrNW_004955536:1,265,409...1,313,326
JBrowse link
glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle involved_in ISO (PMID:17464107) UniProt PMID:17464107 NCBI chrNW_004955425:4,023,001...4,039,980
Ensembl chrNW_004955425:4,026,430...4,040,747
JBrowse link
G Gpr4 G protein-coupled receptor 4 acts_upstream_of_or_within ISO (MGI:3699048|PMID:17145776) MGI PMID:17145776 MGI:3699048 NCBI chrNW_004955574:85,619...87,928
Ensembl chrNW_004955574:86,494...87,582
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (PMID:15821257) UniProt PMID:15821257 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
glomerular parietal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxj1 forkhead box J1 involved_in ISO (PMID:9530170) BHF-UCL PMID:9530170 NCBI chrNW_004955506:6,127,551...6,132,302
Ensembl chrNW_004955506:6,127,551...6,132,302
JBrowse link
glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO (MGI:5647943|PMID:25361754) MGI PMID:25361754 MGI:5647943 NCBI chrNW_004955435:13,029,377...13,040,972
Ensembl chrNW_004955435:13,028,916...13,043,928
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO (MGI:5751943|PMID:26385183) CACAO PMID:26385183 MGI:5751943 NCBI chrNW_004955422:28,662,392...28,721,896
Ensembl chrNW_004955422:28,664,282...28,721,896
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:17442697) UniProt PMID:17442697 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISO (MGI:5498584|PMID:23806616) UniProt PMID:23806616 MGI:5498584 NCBI chrNW_004955415:20,490,414...20,526,068
Ensembl chrNW_004955415:20,490,414...20,527,917
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chrNW_004955410:6,739,115...7,295,027
Ensembl chrNW_004955410:6,400,242...7,294,924
JBrowse link
G Myo1e myosin IE involved_in ISO (MGI:4441423|PMID:19005011) UniProt PMID:19005011 MGI:4441423 NCBI chrNW_004955450:15,421,843...15,551,680
Ensembl chrNW_004955450:15,456,580...15,551,584
JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO (PMID:15821257) UniProt PMID:15821257 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
JBrowse link
G Podxl podocalyxin like involved_in ISO PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chrNW_004955410:36,191,797...36,239,970 JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO (PMID:18618131) UniProt PMID:18618131 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5002772|PMID:21383503) MGI PMID:21383503 MGI:5002772 NCBI chrNW_004955432:14,298,873...14,353,824
Ensembl chrNW_004955432:14,298,822...14,353,824
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (MGI:5449145|PMID:22766025) MGI PMID:22766025 MGI:5449145 NCBI chrNW_004955484:7,782,409...7,861,082
Ensembl chrNW_004955484:7,782,772...7,860,967
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G Gsdmc gasdermin C acts_upstream_of_or_within ISO (PMID:17350798) UniProt PMID:17350798 NCBI chrNW_004955461:4,594,967...4,610,037 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer involved_in ISO (PMID:25731159)
(MGI:5629863|PMID:25731159)
UniProt PMID:25731159 MGI:5629863 NCBI chrNW_004955446:11,790,636...11,837,734
Ensembl chrNW_004955446:11,790,444...11,835,001
JBrowse link
G Klf5 Kruppel like factor 5 acts_upstream_of_or_within ISO (MGI:5471906|PMID:23266329) MGI PMID:23266329 MGI:5471906 NCBI chrNW_004955404:33,642,604...33,665,445
Ensembl chrNW_004955404:33,644,077...33,658,094
JBrowse link
G Nkx3-2 NK3 homeobox 2 acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chrNW_004955480:10,212,929...10,215,814
Ensembl chrNW_004955480:10,213,761...10,216,860
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO (MGI:5014435|PMID:21670299) MGI PMID:21670299 MGI:5014435 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056
JBrowse link
G Spdef SAM pointed domain containing ETS transcription factor acts_upstream_of_or_within ISO (MGI:4410300|PMID:19549527) MGI PMID:19549527 MGI:4410300 NCBI chrNW_004955437:2,667,499...2,679,940
Ensembl chrNW_004955437:2,666,105...2,680,061
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:25731159)
(MGI:5629863|PMID:25731159)
UniProt PMID:25731159 MGI:5629863 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:5498602|PMID:23726973) MGI PMID:23726973 MGI:5498602 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:25731159)
(MGI:5629863|PMID:25731159)
UniProt PMID:25731159 MGI:5629863 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408
JBrowse link
G Yipf6 Yip1 domain family member 6 acts_upstream_of_or_within ISO (MGI:5437477|PMID:22802641) MGI PMID:22802641 MGI:5437477 NCBI chrNW_004955475:8,085,017...8,101,624
Ensembl chrNW_004955475:8,084,886...8,101,624
JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (MGI:4830408|PMID:20808783) MGI PMID:20808783 MGI:4830408 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within ISO (MGI:1349338|PMID:10564089) MGI PMID:10564089 MGI:1349338 NCBI chrNW_004955410:28,835,795...28,838,244
Ensembl chrNW_004955410:28,834,127...28,838,244
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
keratinocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B acts_upstream_of_or_within ISO (MGI:3839552|PMID:19092943) MGI PMID:19092943 MGI:3839552 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Exph5 exophilin 5 involved_in ISO (PMID:23176819) UniProt PMID:23176819 NCBI chrNW_004955412:10,604,853...10,674,683
Ensembl chrNW_004955412:10,604,772...10,674,749
JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:5516520|PMID:24012369) MGI PMID:24012369 MGI:5516520 NCBI chrNW_004955430:7,680,394...7,832,124
Ensembl chrNW_004955430:7,680,394...7,832,124
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:5617064|PMID:25547114) MGI PMID:25547114 MGI:5617064 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180
JBrowse link
G Ift74 intraflagellar transport 74 acts_upstream_of_or_within ISO (MGI:5013962|PMID:21703454) MGI PMID:21703454 MGI:5013962 NCBI chrNW_004955472:7,779,705...7,872,423
Ensembl chrNW_004955472:7,775,981...7,872,423
JBrowse link
G Kdf1 keratinocyte differentiation factor 1 acts_upstream_of_or_within ISO (MGI:5529391|PMID:24075906) MGI PMID:24075906 MGI:5529391 NCBI chrNW_004955452:6,280,391...6,288,985
Ensembl chrNW_004955452:6,280,391...6,289,608
JBrowse link
G Krt10 keratin 10 acts_upstream_of_or_within ISO (MGI:5603985|PMID:24751727) MGI PMID:24751727 MGI:5603985 NCBI chrNW_004955451:15,269,861...15,274,351
Ensembl chrNW_004955451:15,270,222...15,274,312
JBrowse link
G Krt2 keratin 2 acts_upstream_of_or_within ISO (MGI:5603985|PMID:24751727) MGI PMID:24751727 MGI:5603985 NCBI chrNW_004955547:3,027,767...3,035,244
Ensembl chrNW_004955547:3,027,767...3,035,244
JBrowse link
G Plec plectin involved_in ISO (MGI:3721038|PMID:17606998) MGI PMID:17606998 MGI:3721038 NCBI chrNW_004955454:2,583,138...2,644,308
Ensembl chrNW_004955454:2,583,138...2,643,211
JBrowse link
G Sfn stratifin acts_upstream_of_or_within ISO (MGI:5529391|PMID:24075906) MGI PMID:24075906 MGI:5529391 NCBI chrNW_004955452:6,217,519...6,218,481
Ensembl chrNW_004955452:6,217,698...6,218,444
JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:3826689|PMID:18824566) MGI PMID:18824566 MGI:3826689 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (MGI:3826689|PMID:18824566) MGI PMID:18824566 MGI:3826689 NCBI chrNW_004955445:2,626,896...2,636,607
Ensembl chrNW_004955445:2,626,823...2,636,607
JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bfsp1 beaded filament structural protein 1 acts_upstream_of_or_within ISO (MGI:2673300|PMID:15037121) MGI PMID:15037121 MGI:2673300 NCBI chrNW_004955415:26,507,381...26,535,545
Ensembl chrNW_004955415:26,507,528...26,535,551
JBrowse link
G Bfsp2 beaded filament structural protein 2 acts_upstream_of_or_within ISO (MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) MGI PMID:15037121 PMID:17065509 MGI:2673300 MGI:3717045 NCBI chrNW_004955501:5,083,456...5,145,256
Ensembl chrNW_004955501:5,083,456...5,145,256
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:3796810|PMID:18455718)
(MGI:5447585|PMID:23136392)
MGI PMID:18455718 PMID:23136392 MGI:3796810 MGI:5447585 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:3796810|PMID:18455718) MGI PMID:18455718 MGI:3796810 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO (MGI:5447585|PMID:23136392) MGI PMID:23136392 MGI:5447585 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:4888440|PMID:21118511) MGI PMID:21118511 MGI:4888440 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Tmod1 tropomodulin 1 involved_in ISO (MGI:5475090|PMID:23144950) CACAO PMID:23144950 MGI:5475090 NCBI chrNW_004955419:27,841,424...27,915,540
Ensembl chrNW_004955419:27,841,424...27,915,540
JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (MGI:2673300|PMID:15037121) MGI PMID:15037121 MGI:2673300 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in ISO (MGI:3525751|PMID:15572692) UniProt PMID:15572692 MGI:3525751 NCBI chrNW_004955457:11,451,851...11,562,692
Ensembl chrNW_004955457:11,451,851...11,562,696
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO (MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972) UniProt PMID:10096021 PMID:10885750 PMID:11806972 MGI:1339872 MGI:1859108 MGI:2158533 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Cryaa crystallin alpha A acts_upstream_of_or_within ISO (MGI:3655912|PMID:16799046)
(MGI:3775669|PMID:18056999)
MGI PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Epha2 EPH receptor A2 involved_in ISO (MGI:3831440|PMID:18948590) UniProt PMID:18948590 MGI:3831440 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:11850194)
(MGI:1332720|PMID:10080188)
BHF-UCL PMID:10080188 PMID:11850194 MGI:1332720 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Tbc1d20 TBC1 domain family member 20 acts_upstream_of_or_within ISO (MGI:5551670|PMID:24239381) MGI PMID:24239381 MGI:5551670 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
metanephric glomerular mesangial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdgfb platelet derived growth factor subunit B involved_in ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO (MGI:3664526|PMID:16886065) MGI PMID:16886065 MGI:3664526 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO (PMID:11786407) UniProt PMID:11786407 NCBI chrNW_004955406:18,862,054...18,885,214
Ensembl chrNW_004955406:18,863,446...18,885,279
JBrowse link
negative regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S1pr3 sphingosine-1-phosphate receptor 3 involved_in ISO (PMID:24851274) UniProt PMID:24851274 NCBI chrNW_004955515:3,024,258...3,035,996
Ensembl chrNW_004955515:3,024,258...3,035,996
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:20048167) ARUK-UCL PMID:20048167 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
negative regulation of establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1a interleukin 1 alpha ISO RGD PMID:18057314 RGD:10046056 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466
JBrowse link
negative regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator ISO RGD PMID:23178930 RGD:11567224 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382
JBrowse link
pancreatic A cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in ISO (PMID:20592023)
(MGI:4943812|PMID:20592023)
BHF-UCL PMID:20592023 MGI:4943812 RGD:8552352 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
positive regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 involved_in ISO (PMID:25978380)
(MGI:5796260|PMID:25978380)
CAFA PMID:25978380 MGI:5796260 NCBI chrNW_004955514:1,784,302...1,812,845
Ensembl chrNW_004955514:1,783,814...1,815,917
JBrowse link
G Akap11 A-kinase anchoring protein 11 ISO RGD PMID:25188285 RGD:14348953 NCBI chrNW_004955518:4,032,738...4,083,720
Ensembl chrNW_004955518:4,032,448...4,083,697
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:23288152) UniProt PMID:23288152 NCBI chrNW_004955433:22,957,718...22,994,515
Ensembl chrNW_004955433:22,967,960...22,992,924
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:23288152) UniProt PMID:23288152 NCBI chrNW_004955442:18,509,501...18,511,267
Ensembl chrNW_004955442:18,509,676...18,510,332
JBrowse link
G F11r F11 receptor involved_in ISO (PMID:26985018) ARUK-UCL PMID:26985018 NCBI chrNW_004955468:12,764,968...12,785,956
Ensembl chrNW_004955468:12,765,874...12,785,929
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:24280217) AgBase PMID:24280217 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa involved_in ISO (PMID:25651845) UniProt PMID:25651845 NCBI chrNW_004955459:3,097,229...3,105,566
Ensembl chrNW_004955459:3,094,120...3,104,135
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 involved_in ISO (PMID:24851274) UniProt PMID:24851274 NCBI chrNW_004955495:1,528,963...1,530,527
Ensembl chrNW_004955495:1,529,428...1,530,486
JBrowse link
positive regulation of establishment of Sertoli cell barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:28880272 RGD:13703098 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Cftr CF transmembrane conductance regulator ISO RGD PMID:22777528 RGD:11567213 NCBI chrNW_004955432:23,179,645...23,328,347
Ensembl chrNW_004955432:23,178,866...23,328,382
JBrowse link
positive regulation of metanephric glomerular visceral epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISO (MGI:3795840|PMID:18431508) UniProt PMID:18431508 MGI:3795840 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
positive regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death involved_in ISO (MGI:3778846|PMID:18223655) UniProt PMID:18223655 MGI:3778846 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Rfx3 regulatory factor X3 involved_in ISO (MGI:4941444|PMID:20413507) BHF-UCL PMID:20413507 MGI:4941444 NCBI chrNW_004955434:7,635,363...7,910,056
Ensembl chrNW_004955434:7,610,422...7,881,304
JBrowse link
regulation of establishment of endothelial barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955536:611,965...658,647
Ensembl chrNW_004955536:612,774...658,647
JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Plcb1 phospholipase C beta 1 involved_in ISO (MGI:5904576|PMID:27653213) UniProt PMID:27653213 MGI:5904576 NCBI chrNW_004955415:18,210,608...18,915,099
Ensembl chrNW_004955415:18,210,662...18,915,158
JBrowse link
G Ppp1r12a protein phosphatase 1 regulatory subunit 12A NOT|involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955405:18,594,191...18,727,345
Ensembl chrNW_004955405:18,596,541...18,727,345
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in ISO (PMID:25816133) UniProt PMID:25816133 NCBI chrNW_004955413:3,982,670...3,996,320
Ensembl chrNW_004955413:3,981,400...3,996,021
JBrowse link
G Vcl vinculin involved_in ISO (PMID:26923917) ARUK-UCL PMID:26923917 NCBI chrNW_004955437:17,812,998...17,920,253
Ensembl chrNW_004955437:17,813,007...17,920,253
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 involved_in ISO (MGI:5904576|PMID:27653213) UniProt PMID:27653213 MGI:5904576 NCBI chrNW_004955434:17,653,708...17,712,565
Ensembl chrNW_004955434:17,661,364...17,713,159
JBrowse link
regulation of type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator like involved_in ISO (MGI:4819446|PMID:20562852) UniProt PMID:20562852 MGI:4819446 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Clock clock circadian regulator involved_in ISO (MGI:4819446|PMID:20562852) UniProt PMID:20562852 MGI:4819446 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Rheb Ras homolog, mTORC1 binding involved_in ISO (PMID:19258434) CACAO PMID:19258434 NCBI chrNW_004955491:5,795,040...5,833,897
Ensembl chrNW_004955491:5,794,911...5,834,912
JBrowse link
Sertoli cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 ADRM1 26S proteasome ubiquitin receptor involved_in ISO (MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:4849324 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886
JBrowse link
G Akap9 A-kinase anchoring protein 9 acts_upstream_of_or_within ISO (MGI:5496944|PMID:23608191) MGI PMID:23608191 MGI:5496944 NCBI chrNW_004955432:8,933,037...9,090,872
Ensembl chrNW_004955432:8,932,952...9,095,065
JBrowse link
G Atrx ATRX chromatin remodeler acts_upstream_of_or_within ISO (MGI:4950648|PMID:21427128) MGI PMID:21427128 MGI:4950648 NCBI chrNW_004955557:947,368...1,252,701
Ensembl chrNW_004955557:947,167...1,252,724
JBrowse link
G Cst3 cystatin C ISO RGD PMID:9432134 RGD:2306517 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 acts_upstream_of_or_within ISO (MGI:5141538|PMID:21775990) MGI PMID:21775990 MGI:5141538 NCBI chrNW_004955434:5,341,519...5,448,049
Ensembl chrNW_004955434:5,341,286...5,448,235
JBrowse link
G Esr1 estrogen receptor 1 ISO RGD PMID:24056172 RGD:7364870 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:24056172 RGD:7364870 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Fndc3a fibronectin type III domain containing 3A acts_upstream_of_or_within ISO (MGI:50496|PMID:1759682), (MGI:59059|PMID:2164218) MGI PMID:1759682 PMID:2164218 MGI:50496 MGI:59059 NCBI chrNW_004955431:2,553,311...2,696,596
Ensembl chrNW_004955431:2,553,892...2,696,744
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO (MGI:3531357|PMID:14998910) MGI PMID:14998910 MGI:3531357 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G Gata1 GATA binding protein 1 ISO RGD PMID:9089398 RGD:2317794 NCBI chrNW_004955543:334,581...342,042
Ensembl chrNW_004955543:334,061...342,061
JBrowse link
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 acts_upstream_of_or_within ISO (MGI:3623834|PMID:16484321) MGI PMID:16484321 MGI:3623834 NCBI chrNW_004955408:39,041,028...39,136,867
Ensembl chrNW_004955408:39,040,840...39,138,338
JBrowse link
G Map7 microtubule associated protein 7 acts_upstream_of_or_within ISO (MGI:1859100|PMID:10837026) MGI PMID:10837026 MGI:1859100 NCBI chrNW_004955439:404,212...548,732 JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18660385 RGD:5684384 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Nup210l nucleoporin 210 like acts_upstream_of_or_within ISO (MGI:4949532|PMID:20034429) MGI PMID:20034429 MGI:4949532 NCBI chrNW_004955545:601,727...714,225
Ensembl chrNW_004955545:601,900...714,135
JBrowse link
G Sdc1 syndecan 1 ISO RGD PMID:12453641 RGD:1643137 NCBI chrNW_004955469:2,762,696...2,773,697 JBrowse link
G Sox3 SRY-box transcription factor 3 acts_upstream_of_or_within ISO (PMID:11875113) UniProt PMID:11875113 NCBI chrNW_004955489:4,817,753...4,819,858
Ensembl chrNW_004955489:4,817,753...4,819,131
JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (MGI:3836884|PMID:19124014)
(PMID:11875113)
MGI
UniProt
PMID:11875113 PMID:19124014 MGI:3836884 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISO PMID:11875113
(MGI:3836884|PMID:19124014)
UniProt
MGI
PMID:11875113 PMID:19124014 MGI:3836884 RGD:1299273 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of_or_within ISO (MGI:3612377|PMID:16418481) MGI PMID:16418481 MGI:3612377 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
type B pancreatic cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:11865031) BHF-UCL PMID:11865031 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:11865031) BHF-UCL PMID:11865031 NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:11865031) BHF-UCL PMID:11865031 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Cdh2 cadherin 2 involved_in ISO (MGI:6216737|PMID:26750727) UniProt PMID:26750727 MGI:6216737 NCBI chrNW_004955402:15,829,895...16,049,874
Ensembl chrNW_004955402:15,831,110...16,049,890
JBrowse link
G Cdk6 cyclin dependent kinase 6 involved_in ISO (PMID:20668294) UniProt PMID:20668294 NCBI chrNW_004955432:9,521,794...9,727,772
Ensembl chrNW_004955432:9,521,794...9,726,417
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5426345|PMID:22529374) UniProt PMID:22529374 MGI:5426345 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Insm1 INSM transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:3655758|PMID:16951258) MGI PMID:16951258 MGI:3655758 NCBI chrNW_004955415:28,396,176...28,398,114 JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO (MGI:3761395|PMID:17456846)
(MGI:3703458|PMID:17202186)
MGI PMID:17202186 PMID:17456846 MGI:3703458 MGI:3761395 NCBI chrNW_004955415:29,263,741...29,268,259
Ensembl chrNW_004955415:29,258,434...29,268,259
JBrowse link
G Nkx6-1 NK6 homeobox 1 ISO RGD PMID:9603781 RGD:2326025 NCBI chrNW_004955474:5,211,281...5,214,785 JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO (MGI:4365695|PMID:19635472) UniProt PMID:19635472 MGI:4365695 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Sidt2 SID1 transmembrane family member 2 acts_upstream_of_or_within ISO (MGI:5529865|PMID:23776622) MGI PMID:23776622 MGI:5529865 NCBI chrNW_004955412:18,505,453...18,521,667
Ensembl chrNW_004955412:18,505,453...18,522,082
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:4833770|PMID:20185815) MGI PMID:20185815 MGI:4833770 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3663526|PMID:16246260) MGI PMID:16246260 MGI:3663526 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
type B pancreatic cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rfx3 regulatory factor X3 involved_in ISO (MGI:4941444|PMID:20413507) BHF-UCL PMID:20413507 MGI:4941444 NCBI chrNW_004955434:7,635,363...7,910,056
Ensembl chrNW_004955434:7,610,422...7,881,304
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11939
    developmental process 5663
      anatomical structure development 5292
        cell development 2126
          epithelial cell development 263
            Sertoli cell development + 28
            auditory receptor cell development + 28
            columnar/cuboidal epithelial cell development + 45
            endothelial cell development + 76
            epithelial cell maturation + 18
            epithelial cell morphogenesis + 42
            glomerular epithelial cell development + 13
            glomerular epithelial cell fate commitment + 0
            glomerular mesangial cell development + 4
            granulosa cell development 0
            keratinocyte development + 16
            lens fiber cell development + 14
            ovarian follicle cell development + 0
Path 2
Term Annotations click to browse term
  biological_process 11939
    developmental process 5663
      anatomical structure development 5292
        tissue development 1838
          epithelium development 1144
            epithelial cell differentiation 627
              epithelial cell development 263
                Sertoli cell development + 28
                auditory receptor cell development + 28
                columnar/cuboidal epithelial cell development + 45
                endothelial cell development + 76
                epithelial cell maturation + 18
                epithelial cell morphogenesis + 42
                glomerular epithelial cell development + 13
                glomerular epithelial cell fate commitment + 0
                glomerular mesangial cell development + 4
                granulosa cell development 0
                keratinocyte development + 16
                lens fiber cell development + 14
                ovarian follicle cell development + 0
paths to the root