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ONTOLOGY REPORT - ANNOTATIONS


Term:chondrocyte differentiation
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Accession:GO:0002062 term browser browse the term
Definition:The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.


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chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:2146046 (MGI:6193362|PMID:29618652) RGD PMID:29618652 MGI:6193362 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Arid5a AT-rich interaction domain 5A acts_upstream_of_or_within ISO (MGI:5317270|PMID:21346191) RGD PMID:21346191 MGI:5317270 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16194878)
Ensembl
RGD
PMID:16194878 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4418577|PMID:20059955)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20059955 GO_REF:0000024 GO_REF:0000107 MGI:4418577 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:5522580|PMID:24098149) RGD PMID:24098149 MGI:5522580 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in
ISO MGI:1927616|MGI:95688 (MGI:3819026|PMID:18363966)
(MGI:5522580|PMID:24098149)
RGD PMID:18363966 PMID:24098149 MGI:3819026 MGI:5522580 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO
ISS
IMP
(PMID:21871891)
GO_REF:0000024
RGD
UniProt
PMID:21871891 PMID:21871891 GO_REF:0000024, RGD:10400852 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
JBrowse link
G Col11a2 collagen type XI alpha 2 chain acts_upstream_of_or_within ISO MGI:2154689 (MGI:2151300|PMID:11668593) RGD PMID:11668593 MGI:2151300 NCBI chr20:4,786,929...4,816,598
Ensembl chr20:4,786,929...4,815,985
JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
MGI:2152978 (MGI:3697977|PMID:11680679), (MGI:77563|PMID:7590256), (PMID:9119111)
GO_REF:0000107
RGD
Ensembl
PMID:7590256 PMID:9119111 PMID:11680679 PMID:21627568 GO_REF:0000107 MGI:3697977 MGI:77563, RGD:5134342 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431 (MGI:6405577|PMID:31655293) RGD PMID:31655293 MGI:6405577 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Col9a1 collagen type IX alpha 1 chain IEP RGD PMID:8992886 RGD:1600950 NCBI chr 9:26,585,034...26,668,222
Ensembl chr 9:26,585,034...26,668,213
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:4438315|PMID:19767744)
UniProt
RGD
PMID:19767744 GO_REF:0000024 MGI:4438315 NCBI chr 4:65,907,570...66,112,078
Ensembl chr 4:65,907,655...66,023,763
JBrowse link
G Cst5 cystatin D acts_upstream_of_or_within ISO (MGI:2681375|PMID:13679380) RGD PMID:13679380 MGI:2681375 NCBI chr 3:137,573,194...137,577,754
Ensembl chr 3:137,573,194...137,577,754
JBrowse link
G Cytl1 cytokine like 1 acts_upstream_of_or_within ISO (MGI:3758399|PMID:17644814) RGD PMID:17644814 MGI:3758399 NCBI chr14:73,053,876...73,058,886
Ensembl chr14:73,053,877...73,058,886
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:4431165|PMID:20080592), (MGI:4834113|PMID:20404326), (MGI:5487694|PMID:23458899), (MGI:6407539|PMID:28768899) RGD PMID:20080592 PMID:20404326 PMID:23458899 PMID:28768899 MGI:4431165 MGI:4834113 MGI:5487694 MGI:6407539 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961|MGI:95522 (MGI:3716021|PMID:17544391) RGD PMID:17544391 MGI:3716021 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:104723 (MGI:3716021|PMID:17544391) RGD PMID:17544391 MGI:3716021 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1915509 (MGI:5473722|PMID:23333501) RGD PMID:23333501 MGI:5473722 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:15946906)
UniProt
RGD
PMID:15946906 GO_REF:0000024 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Hes5 hes family bHLH transcription factor 5 NOT|involved_in ISS
ISO
GO_REF:0000024
(MGI:5285816|PMID:17093926)
UniProt
RGD
PMID:17093926 GO_REF:0000024 MGI:5285816 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO
ISS
(PMID:21484705)
GO_REF:0000024
RGD
UniProt
PMID:21484705 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934891 (MGI:1930356|PMID:10545953) RGD PMID:10545953 MGI:1930356 NCBI chr 5:149,677,437...149,778,594 JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:95728 (MGI:5473722|PMID:23333501) RGD PMID:23333501 MGI:5473722 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3758399|PMID:17644814)
(MGI:5487758|PMID:17202865)
Ensembl
RGD
PMID:17202865 PMID:17644814 GO_REF:0000107 MGI:3758399 MGI:5487758 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Matn1 matrilin 1 acts_upstream_of_or_within ISO MGI:2153042|MGI:3663272 (MGI:3655339|PMID:16877353) RGD PMID:16877353 MGI:3655339 NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:99533 (MGI:3701381|PMID:17336904) RGD PMID:17336904 MGI:3701381 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99458 (MGI:3701381|PMID:17336904)
Ensembl
RGD
PMID:17336904 GO_REF:0000107 MGI:3701381 NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:6,072,908...6,075,158
Ensembl chr16:6,072,833...6,075,161
JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO
GO_REF:0000024
(MGI:5284771|PMID:17904922)
UniProt
RGD
PMID:17904922 GO_REF:0000024 MGI:5284771 NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
JBrowse link
G Prkca protein kinase C, alpha acts_upstream_of_or_within ISO (MGI:3758399|PMID:17644814) RGD PMID:17644814 MGI:3758399 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Pth1r parathyroid hormone 1 receptor acts_upstream_of_or_within ISO MGI:2154519|MGI:99829 (MGI:3620436|PMID:16476422), (MGI:3624906|PMID:9832460) RGD PMID:9832460 PMID:16476422 MGI:3620436 MGI:3624906 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO (MGI:3807134|PMID:18638549) RGD PMID:18638549 MGI:3807134 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Runx1 RUNX family transcription factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:102672|MGI:2176466|MGI:97801 (MGI:3620436|PMID:16476422), (MGI:5462316|PMID:22916278)
RGD PMID:16476422 PMID:22916278 PMID:21873635 MGI:3620436 MGI:5462316, RGD:13792537 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:99829 (MGI:5462316|PMID:22916278)
RGD PMID:22916278 PMID:21873635 MGI:5462316, RGD:13792537 NCBI chr 5:147,393,926...147,419,161
Ensembl chr 5:147,360,994...147,419,156
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4418577|PMID:20059955) RGD PMID:20059955 MGI:4418577 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
G Six2 SIX homeobox 2 acts_upstream_of_or_within ISO MGI:3691857 (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (MGI:4950776|PMID:21445361) RGD PMID:21445361 MGI:4950776 NCBI chr15:45,376,806...45,423,549
Ensembl chr15:45,376,917...45,423,524
JBrowse link
G Snx19 sorting nexin 19 involved_in
acts_upstream_of_or_within
ISO (PMID:19877062)
(MGI:5605298|PMID:19877062)
RGD PMID:19877062 MGI:5605298 NCBI chr 8:28,829,881...28,867,600
Ensembl chr 8:28,829,886...28,867,061
JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 MGI:2446758 MGI:3037234 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235)
UniProt
RGD
PMID:11702786 PMID:14993235 GO_REF:0000024 MGI:2446758 MGI:3037234 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
(PMID:9119111)
(MGI:3044231|PMID:15132997), (MGI:6414736|PMID:29644115), (MGI:6414737|PMID:32103177)
GO_REF:0000024
RGD
UniProt
PMID:9119111 PMID:15132997 PMID:29644115 PMID:32103177 PMID:21873635 GO_REF:0000024 MGI:3044231 MGI:6414736 MGI:6414737, RGD:13792537 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:15040835)
UniProt
RGD
PMID:15040835 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfbi transforming growth factor, beta induced IEP RGD PMID:16546826 RGD:1599388 NCBI chr17:7,955,603...7,984,903
Ensembl chr17:7,955,603...7,985,240
JBrowse link
G Trps1 transcriptional repressor GATA binding 1 acts_upstream_of_or_within ISO MGI:107191|MGI:95688 (MGI:3819026|PMID:18363966) RGD PMID:18363966 MGI:3819026 NCBI chr 7:81,916,668...82,142,733
Ensembl chr 7:81,921,601...82,141,905
JBrowse link
G Wnt10b Wnt family member 10B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Wnt2b Wnt family member 2B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
JBrowse link
G Wnt5b Wnt family member 5B involved_in ISO (PMID:15135146) RGD PMID:15135146 NCBI chr 4:152,609,566...152,733,790
Ensembl chr 4:152,609,569...152,733,407
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:17202865) RGD PMID:17202865 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856465 (MGI:1270958|PMID:9664687)
Ensembl
RGD
PMID:9664687 GO_REF:0000107 MGI:1270958 NCBI chr 1:132,981,034...133,044,416
Ensembl chr 1:132,981,582...133,043,627
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:9442116) RGD PMID:9442116 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990 (MGI:3799383|PMID:18539921) RGD PMID:18539921 MGI:3799383 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within ISO MGI:5007063 (MGI:5316547|PMID:22280990) RGD PMID:22280990 MGI:5316547 NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601
JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (MGI:53676|PMID:4100752) RGD PMID:4100752 MGI:53676 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3758741|MGI:5550566 (MGI:3723532|PMID:17588960), (MGI:5550565|PMID:22006726)
Ensembl
RGD
PMID:17588960 PMID:22006726 GO_REF:0000107 MGI:3723532 MGI:5550565 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Ecm1 extracellular matrix protein 1 acts_upstream_of_or_within ISO (MGI:4452294|PMID:20138147) RGD PMID:20138147 MGI:4452294 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO MGI:2183829 (MGI:2670283|PMID:12865332) RGD PMID:12865332 MGI:2670283 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178751 (MGI:3703411|PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107 MGI:3703411 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (MGI:5008683|PMID:21606205) RGD PMID:21606205 MGI:5008683 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (MGI:1355063|PMID:10742104)
Ensembl
RGD
PMID:10742104 GO_REF:0000107 MGI:1355063 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Rarg retinoic acid receptor, gamma involved_in ISO (MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:3848572 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176466 (MGI:1334093|PMID:10213384)
Ensembl
RGD
PMID:10213384 GO_REF:0000107 MGI:1334093 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:3810257 (MGI:3806414|PMID:18729207) RGD PMID:18729207 MGI:3806414 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within ISO MGI:3605739 (MGI:3714677|PMID:17481601) RGD PMID:17481601 MGI:3714677 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:3575405 (MGI:3715574|PMID:17591962), (MGI:5582670|PMID:24505141) RGD PMID:17591962 PMID:24505141 MGI:3715574 MGI:5582670 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (MGI:3784676|PMID:18415932) RGD PMID:18415932 MGI:3784676 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
(MGI:5306560|PMID:20479257)
GO_REF:0000024
UniProt
RGD
PMID:20479257 GO_REF:0000024 GO_REF:0000104 MGI:5306560 NCBI chr 5:6,362,896...6,526,174
Ensembl chr 5:6,362,911...6,525,584
JBrowse link
G Sulf2 sulfatase 2 involved_in ISO (MGI:5306560|PMID:20479257) RGD PMID:20479257 MGI:5306560 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
chondrocyte development involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinh1 serpin family H member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176070|MGI:5505265 (MGI:5494537|PMID:22492985)
Ensembl
RGD
PMID:22492985 GO_REF:0000107 MGI:5494537 NCBI chr 1:153,643,500...153,650,853
Ensembl chr 1:153,643,510...153,650,801
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5293259|PMID:21788370)
Ensembl
RGD
PMID:21788370 GO_REF:0000107 MGI:5293259 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
chondrocyte differentiation involved in endochondral bone morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3579503 (MGI:4818263|PMID:19623616)
Ensembl
RGD
PMID:19623616 GO_REF:0000107 MGI:4818263 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:5698232 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 acts_upstream_of_or_within ISO MGI:5698367 (MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:5698232 NCBI chr 1:163,831,876...163,899,925
Ensembl chr 1:163,832,015...163,899,393
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
(PMID:20676705)
GO_REF:0000024
RGD
UniProt
PMID:20676705 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO MGI:4829605 (MGI:4822550|PMID:20089971) RGD PMID:20089971 MGI:4822550 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
JBrowse link
chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5528913|PMID:23958822) RGD PMID:23958822 MGI:5528913 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Mex3c mex-3 RNA binding family member C acts_upstream_of_or_within ISO MGI:3764947 (MGI:5446032|PMID:22357625) RGD PMID:22357625 MGI:5446032 NCBI chr18:67,167,600...67,188,595
Ensembl chr18:67,166,718...67,188,595
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:4950303|PMID:21367821)
UniProt
RGD
PMID:21367821 GO_REF:0000024 MGI:4950303 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
growth plate cartilage chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col27a1 collagen type XXVII alpha 1 chain acts_upstream_of_or_within ISO MGI:5315593 (MGI:5315238|PMID:22206015) RGD PMID:22206015 MGI:5315238 NCBI chr 5:76,647,302...76,765,987
Ensembl chr 5:76,647,429...76,765,174
JBrowse link
G Poc1a POC1 centriolar protein A acts_upstream_of_or_within ISO MGI:2135614 (MGI:5700251|PMID:26496357) RGD PMID:26496357 MGI:5700251 NCBI chr 8:106,922,058...106,991,678
Ensembl chr 8:106,922,978...106,991,089
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
JBrowse link
growth plate cartilage chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa6 annexin A6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:39,101,395...39,156,483
Ensembl chr10:39,097,109...39,156,433
JBrowse link
G Atf2 activating transcription factor 2 involved_in ISO MGI:1857283 (MGI:3807134|PMID:18638549) RGD PMID:18638549 MGI:3807134 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3665440|MGI:5818514 (MGI:5817320|PMID:26098911) RGD PMID:26098911 MGI:5817320 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024
JBrowse link
G Nppc natriuretic peptide C involved_in ISS
ISO
GO_REF:0000024
(MGI:2177134|PMID:11259675)
UniProt
RGD
PMID:11259675 GO_REF:0000024 MGI:2177134 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
JBrowse link
growth plate cartilage chondrocyte growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rarg retinoic acid receptor, gamma involved_in ISO (MGI:3848572|PMID:19389355) RGD PMID:19389355 MGI:3848572 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5317468|PMID:22421045)
UniProt
RGD
PMID:22421045 GO_REF:0000024 MGI:5317468 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 acts_upstream_of_or_within ISO MGI:2384513 (MGI:4949016|PMID:21420963) RGD PMID:21420963 MGI:4949016 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
growth plate cartilage chondrocyte morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Matn1 matrilin 1 acts_upstream_of_or_within ISO MGI:2153042|MGI:3663272 (MGI:3655339|PMID:16877353) RGD PMID:16877353 MGI:3655339 NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
JBrowse link
negative regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within ISO (PMID:90087) RGD PMID:90087 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
JBrowse link
G Rflna refilin A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1923816 (MGI:5570967|PMID:24436304)
RGD PMID:24436304 PMID:21873635 MGI:5570967, RGD:13792537 NCBI chr12:31,633,361...31,642,317
Ensembl chr12:31,633,361...31,642,317
JBrowse link
G Rflnb refilin B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1920371 (MGI:5570967|PMID:24436304)
RGD PMID:24436304 PMID:21873635 MGI:5570967, RGD:13792537 NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
JBrowse link
negative regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO (PMID:22247065) RGD PMID:22247065 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO (PMID:22247065) RGD PMID:22247065 NCBI chr 8:90,704,727...90,744,331
Ensembl chr 8:90,704,727...90,744,328
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3714677|PMID:17481601)
Ensembl
RGD
PMID:17481601 GO_REF:0000107 MGI:3714677 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:6294593|PMID:15331410)
Ensembl
RGD
PMID:15331410 GO_REF:0000107 MGI:6294593 NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
JBrowse link
G Chadl chondroadherin-like involved_in ISO (MGI:5617405|PMID:25451920) RGD PMID:25451920 MGI:5617405 NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2446084 (MGI:3701031|PMID:16818445)
Ensembl
RGD
PMID:16818445 GO_REF:0000107 MGI:3701031 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO
IEA
ISS
(PMID:20005202)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20005202 GO_REF:0000024 GO_REF:0000107 NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in ISO (PMID:21976273) RGD PMID:21976273 NCBI chr 3:144,454,306...144,458,757
Ensembl chr 3:144,454,338...144,458,612
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857509 (MGI:3709778|PMID:17328886) RGD PMID:17328886 MGI:3709778 NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:10556075) RGD PMID:10556075 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO MGI:2180017 (MGI:2178869|PMID:11790802) RGD PMID:11790802 MGI:2178869 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
JBrowse link
G Mkx mohawk homeobox IMP RGD PMID:27370800 RGD:40924660 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
JBrowse link
G Nkx3-2 NK3 homeobox 2 involved_in ISO (MGI:3617032|PMID:16421188) RGD PMID:16421188 MGI:3617032 NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
JBrowse link
G Pth parathyroid hormone involved_in IMP PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within ISO MGI:2154515|MGI:95728 (MGI:1352921|PMID:8895385), (MGI:3709778|PMID:17328886)
(PMID:90087)
RGD PMID:90087 PMID:8895385 PMID:17328886 MGI:1352921 MGI:3709778 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:6414736|PMID:29644115)
UniProt
RGD
PMID:29644115 GO_REF:0000024 MGI:6414736 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO (MGI:1353721|PMID:10684250) RGD PMID:10684250 MGI:1353721 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
JBrowse link
G Rarg retinoic acid receptor, gamma acts_upstream_of_or_within ISO (MGI:1353721|PMID:10684250) RGD PMID:10684250 MGI:1353721 NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19756381) RGD PMID:19756381 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2158693 (MGI:2135696|PMID:11371614)
UniProt
RGD
PMID:11371614 GO_REF:0000024 MGI:2135696 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO (MGI:3848261|PMID:19494318) RGD PMID:19494318 MGI:3848261 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO MGI:3701350|MGI:88276 (MGI:3701031|PMID:16818445) RGD PMID:16818445 MGI:3701031 NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
JBrowse link
positive regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 IDA RGD PMID:23077084 RGD:7242190 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:95524 (MGI:3584218|PMID:15781473)
Ensembl
RGD
PMID:15781473 GO_REF:0000107 MGI:3584218 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
JBrowse link
G Gdf5 growth differentiation factor 5 involved_in
acts_upstream_of_or_within
ISO (PMID:21976273), (PMID:24098149)
MGI:1927616 (MGI:1329266|PMID:9885252), (MGI:3819026|PMID:18363966)
RGD PMID:9885252 PMID:18363966 PMID:21976273 PMID:24098149 MGI:1329266 MGI:3819026 NCBI chr 3:144,454,306...144,458,757
Ensembl chr 3:144,454,338...144,458,612
JBrowse link
G Gdf6 growth differentiation factor 6 involved_in ISO
ISS
(PMID:26643732)
GO_REF:0000024
RGD
UniProt
PMID:26643732 GO_REF:0000024 NCBI chr 5:22,996,246...23,012,567
Ensembl chr 5:22,996,246...23,012,567
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:3709778|PMID:17328886) RGD PMID:17328886 MGI:3709778 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:3043491 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:3043491 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5320274|PMID:21071451)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21071451 GO_REF:0000024 GO_REF:0000107 MGI:5320274 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 acts_upstream_of_or_within ISO (MGI:5703727|PMID:19410023) RGD PMID:19410023 MGI:5703727 NCBI chr16:6,072,908...6,075,158
Ensembl chr16:6,072,833...6,075,161
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:3813934|PMID:19097194), (MGI:4438146|PMID:19465597) RGD PMID:19097194 PMID:19465597 MGI:3813934 MGI:4438146 NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
JBrowse link
G Por cytochrome p450 oxidoreductase IMP RGD PMID:19264869 RGD:2316785 NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IMP RGD PMID:17884819 RGD:2298851 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176465 (MGI:1332911|PMID:10072783)
Ensembl
RGD
PMID:10072783 GO_REF:0000107 MGI:1332911 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (MGI:5285145|PMID:21035443) RGD PMID:21035443 MGI:5285145 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISO
IBA
(PMID:21401405)
(MGI:5285147|PMID:20940257)
PMID:21873635
RGD PMID:20940257 PMID:21401405 PMID:21873635 MGI:5285147, RGD:13792537 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO
IBA
(PMID:21401405)
(MGI:5285147|PMID:20940257)
PMID:21873635
RGD PMID:20940257 PMID:21401405 PMID:21873635 MGI:5285147, RGD:13792537 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
IBA
(PMID:20676705), (PMID:21401405)
(MGI:4950303|PMID:21367821), (MGI:5285147|PMID:20940257)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:20676705 PMID:20940257 PMID:21367821 PMID:21401405 PMID:21873635 GO_REF:0000024 MGI:4950303 MGI:5285147, RGD:13792537 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Thrb thyroid hormone receptor beta IDA RGD PMID:15647824 RGD:1601663 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISO
ISS
(PMID:21547890)
GO_REF:0000024
RGD
UniProt
PMID:21547890 GO_REF:0000024 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
JBrowse link
G Zfp219 zinc finger protein 219 involved_in ISO (MGI:5285147|PMID:20940257) RGD PMID:20940257 MGI:5285147 NCBI chr15:24,695,831...24,710,039
Ensembl chr15:24,695,837...24,710,030
JBrowse link
positive regulation of chondrocyte hypertrophy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad7 SMAD family member 7 involved_in IEA
ISO
GO_REF:0000107
(MGI:6377914|PMID:29503843)
Ensembl
RGD
PMID:29503843 GO_REF:0000107 MGI:6377914 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
regulation of chondrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3579503 (MGI:4818263|PMID:19623616)
Ensembl
RGD
PMID:19623616 GO_REF:0000107 MGI:4818263 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
JBrowse link
regulation of chondrocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO MGI:2663631 (MGI:4413658|PMID:18597638) RGD PMID:18597638 MGI:4413658 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Glg1 golgi glycoprotein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4829764 (MGI:4829577|PMID:20530870)
Ensembl
RGD
PMID:20530870 GO_REF:0000107 MGI:4829577 NCBI chr19:39,124,892...39,224,178
Ensembl chr19:39,124,641...39,224,178
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO MGI:96203 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO MGI:96172 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 3:59,584,840...59,587,257 JBrowse link
G Lnpk lunapark, ER junction formation factor acts_upstream_of_or_within ISO (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
JBrowse link
G Maf MAF bZIP transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148636 (MGI:2676505|PMID:14512017)
Ensembl
RGD
PMID:14512017 GO_REF:0000107 MGI:2676505 NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6467698|PMID:29196633)
UniProt
RGD
PMID:29196633 GO_REF:0000024 MGI:6467698 NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485
JBrowse link
G Mdk midkine involved_in ISS
ISO
GO_REF:0000024
(MGI:5693192|PMID:25551381)
UniProt
RGD
PMID:25551381 GO_REF:0000024 MGI:5693192 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Pthlh parathyroid hormone-like hormone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
JBrowse link
G Shox2 short stature homeobox 2 acts_upstream_of_or_within ISO MGI:3628798 (MGI:3621617|PMID:16537395) RGD PMID:16537395 MGI:3621617 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
JBrowse link
G Trps1 transcriptional repressor GATA binding 1 involved_in ISO (MGI:3848565|PMID:19389374) RGD PMID:19389374 MGI:3848565 NCBI chr 7:81,916,668...82,142,733
Ensembl chr 7:81,921,601...82,141,905
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular developmental process 4478
        cell differentiation 4383
          chondrocyte differentiation 121
            chondrocyte development + 33
            chondrocyte differentiation involved in endochondral bone morphogenesis + 17
            negative regulation of chondrocyte differentiation + 24
            positive regulation of chondrocyte differentiation + 21
            regulation of chondrocyte differentiation + 53
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      anatomical structure development 6196
        multicellular organism development 5633
          system development 5301
            animal organ development 4061
              cartilage development 219
                chondrocyte differentiation 121
                  chondrocyte development + 33
                  chondrocyte differentiation involved in endochondral bone morphogenesis + 17
                  negative regulation of chondrocyte differentiation + 24
                  positive regulation of chondrocyte differentiation + 21
                  regulation of chondrocyte differentiation + 53
paths to the root