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ONTOLOGY REPORT - ANNOTATIONS


Term:morphogenesis of an epithelial sheet
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Accession:GO:0002011 term browser browse the term
Definition:The process in which the anatomical structures of an epithelial sheet are generated and organized. An epithelial sheet is a flat surface consisting of closely packed epithelial cells.



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morphogenesis of an epithelial sheet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap12 Rho GTPase activating protein 12 involved_in ISO (PMID:23201090) RGD PMID:23201090 NCBI chr17:51,588,810...51,702,417
Ensembl chr17:51,588,842...51,702,080
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex acts_upstream_of_or_within ISO MGI:3045616 (MGI:3042351|PMID:14960276) RGD PMID:14960276 MGI:3042351 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within ISO (MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:2156962 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96185 (MGI:2149906|PMID:11518511) RGD PMID:11518511 MGI:2149906 NCBI chr10:81,317,927...81,320,223
Ensembl chr10:81,318,026...81,320,192
JBrowse link
G Hoxb4 homeo box B4 acts_upstream_of_or_within ISO MGI:96183 (MGI:2149906|PMID:11518511) RGD PMID:11518511 MGI:2149906 NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128
JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857713 (MGI:2158685|PMID:11861489)
Ensembl
RGD
PMID:11861489 GO_REF:0000107 MGI:2158685 NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3530455 (MGI:2156962|PMID:11798066), (MGI:3529401|PMID:15668394) RGD PMID:11798066 PMID:15668394 MGI:2156962 MGI:3529401 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component involved_in ISO (PMID:23201090) RGD PMID:23201090 NCBI chr 3:96,406,825...96,414,137
Ensembl chr 3:96,406,813...96,417,728
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO MGI:2676654 (MGI:5608927|PMID:25224220) RGD PMID:25224220 MGI:5608927 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1933205 (MGI:2158685|PMID:11861489)
Ensembl
RGD
PMID:11861489 GO_REF:0000107 MGI:2158685 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISO
IBA
(PMID:23201090)
PMID:21873635
RGD PMID:23201090 PMID:21873635 RGD:13792537 NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 involved_in ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:3797299|PMID:18423449)
UniProt
RGD
PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:106613 (MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:3624185 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO MGI:2135272|MGI:2429760|MGI:94941 (MGI:3624185|PMID:16571627) RGD PMID:16571627 MGI:3624185 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:106613|MGI:1857642 (MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766) RGD PMID:16571627 PMID:17229766 MGI:3624185 MGI:3703464 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
epiboly involved in gastrulation with mouth forming second term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Megf8 multiple EGF-like-domains 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:23063620)
Ensembl
RGD
PMID:23063620 GO_REF:0000107 NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
JBrowse link
negative regulation of planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:4830282 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 involved_in ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:3056036 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:98958 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:3027664|PMID:14701881), (MGI:4837019|PMID:20890042), (MGI:5298073|PMID:21311046) RGD PMID:14701881 PMID:20890042 PMID:21311046 MGI:3027664 MGI:4837019 MGI:5298073 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:2155441 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
JBrowse link
G Tbx20 T-box transcription factor 20 involved_in ISO (MGI:3579960|PMID:15901664) RGD PMID:15901664 MGI:3579960 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1298218 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
planar cell polarity pathway involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of ISO MGI:98958 (MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:4830282 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO MGI:1857617 (MGI:4830282|PMID:19056682) RGD PMID:19056682 MGI:4830282 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 FERM domain containing kindlin 1 involved_in ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Mir221 microRNA 221 involved_in ISO (PMID:24269686) RGD PMID:24269686 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:26,876,686...27,002,615
Ensembl chr17:26,876,697...27,002,615
JBrowse link
proepicardium cell migration involved in pericardium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3796818|PMID:18448090)
UniProt
RGD
PMID:18448090 GO_REF:0000024 MGI:3796818 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
wound healing, spreading of cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
GO_REF:0000024
(MGI:3803424|PMID:18502760)
UniProt
RGD
PMID:18502760 GO_REF:0000024 MGI:3803424 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO (PMID:26466680), (PMID:26578515) RGD PMID:26466680 PMID:26578515 NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
JBrowse link
G Ccn1 cellular communication network factor 1 involved_in ISO (PMID:20675382) RGD PMID:20675382 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Cd151 CD151 molecule (Raph blood group) acts_upstream_of_or_within ISO (PMID:17716972) RGD PMID:17716972 NCBI chr 1:196,564,744...196,568,753
Ensembl chr 1:196,565,181...196,568,753
JBrowse link
G Cd44 CD44 molecule (Indian blood group) involved_in ISS
ISO
GO_REF:0000024
(PMID:20962267)
UniProt
RGD
PMID:20962267 GO_REF:0000024 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:16291724)
UniProt
RGD
PMID:16291724 GO_REF:0000024 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 involved_in ISO
ISS
IEA
(PMID:12065315)
GO_REF:0000024
GO_REF:0000107
(MGI:3629583|PMID:12065315)
RGD
UniProt
Ensembl
PMID:12065315 GO_REF:0000024 GO_REF:0000107 MGI:3629583 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Flna filamin A involved_in ISO (PMID:16291724) RGD PMID:16291724 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 NOT|involved_in ISO (PMID:16636079) RGD PMID:16636079 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
JBrowse link
G Mrtfa myocardin related transcription factor A involved_in ISO (PMID:29391067) RGD PMID:29391067 NCBI chr 7:112,544,312...112,714,431
Ensembl chr 7:112,544,312...112,714,418
JBrowse link
G Pard3 par-3 family cell polarity regulator acts_upstream_of_or_within ISO (MGI:4359132|PMID:19540120) RGD PMID:19540120 MGI:4359132 NCBI chr19:55,080,282...55,630,111
Ensembl chr19:55,080,282...55,629,778
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:20332113) RGD PMID:20332113 NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
JBrowse link
G Pdpn podoplanin involved_in ISS
ISO
GO_REF:0000024
(PMID:20962267)
UniProt
RGD
PMID:20962267 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Rhoa ras homolog family member A involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Rhoc ras homolog family member C involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 acts_upstream_of_or_within ISO (PMID:24632071) RGD PMID:24632071 NCBI chr 9:50,445,550...50,733,482
Ensembl chr 9:50,436,079...50,733,475
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(MGI:3814961|PMID:18827015)
UniProt
RGD
PMID:18827015 GO_REF:0000024 MGI:3814961 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
wound healing, spreading of epidermal cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:14970227) RGD PMID:14970227 NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI:3578221 (MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:3577694 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5297730|PMID:21911940)
RGD PMID:21911940 PMID:21873635 MGI:5297730, RGD:13792537 NCBI chr14:6,800,631...7,184,001
Ensembl chr14:6,800,631...7,183,823
JBrowse link
G Col5a1 collagen type V alpha 1 chain involved_in ISO
IEA
(PMID:18305566)
GO_REF:0000107
RGD
Ensembl
PMID:18305566 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
G Hbegf heparin-binding EGF-like growth factor involved_in ISO (MGI:3580979|PMID:15923649) RGD PMID:15923649 MGI:3580979 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
JBrowse link
G Itga5 integrin subunit alpha 5 involved_in ISO (PMID:14970227) RGD PMID:14970227 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Lrg1 leucine-rich alpha-2-glycoprotein 1 acts_upstream_of_or_within ISO (PMID:32887674)
(MGI:6489653|PMID:32887674)
RGD PMID:32887674 MGI:6489653 NCBI chr 9:947,516...949,773
Ensembl chr 9:947,516...949,813
JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15802269)
Ensembl
RGD
PMID:15802269 GO_REF:0000107 NCBI chr 8:4,581,785...4,591,687
Ensembl chr 8:4,581,785...4,599,611
JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926381 (MGI:4868690|PMID:19769717)
Ensembl
RGD
PMID:19769717 GO_REF:0000107 MGI:4868690 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
JBrowse link
G Plet1 placenta expressed transcript 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4453442|PMID:20130590)
UniProt
RGD
PMID:20130590 PMID:21873635 GO_REF:0000024 MGI:4453442, RGD:13792537 NCBI chr 8:50,842,210...50,854,015
Ensembl chr 8:50,841,854...50,853,659
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:176,304,942...176,338,816
Ensembl chr 1:176,304,942...176,338,816
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:15802269) RGD PMID:15802269 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    developmental process 6926
      anatomical structure morphogenesis 2992
        tissue morphogenesis 722
          morphogenesis of an epithelium 601
            morphogenesis of an epithelial sheet 67
              closure of optic fissure 2
              epiboly + 41
              neural plate elongation + 3
              neural plate thickening 0
              pericardium morphogenesis + 9
Path 2
Term Annotations click to browse term
  biological_process 18877
    developmental process 6926
      anatomical structure development 6400
        anatomical structure morphogenesis 2992
          tissue morphogenesis 722
            morphogenesis of an epithelium 601
              morphogenesis of an epithelial sheet 67
                closure of optic fissure 2
                epiboly + 41
                neural plate elongation + 3
                neural plate thickening 0
                pericardium morphogenesis + 9
paths to the root