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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of cell-matrix adhesion
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Accession:GO:0001954 term browser browse the term
Definition:Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix.
Synonyms:exact_synonym: up-regulation of cell-matrix adhesion;   upregulation of cell-matrix adhesion
 narrow_synonym: activation of cell-matrix adhesion;   stimulation of cell-matrix adhesion



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positive regulation of cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15569314), (PMID:18308860) RGD PMID:15569314 PMID:18308860 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in IBA
ISO
PMID:21873635
(PMID:18308860)
RGD PMID:18308860 PMID:21873635 RGD:13792537 NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997
JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:17416590) RGD PMID:17416590 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Cd3e CD3e molecule involved_in ISO UniProtKB:Q86WV1 (MGI:6201899|PMID:12652296) RGD PMID:12652296 MGI:6201899 NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:17573778) RGD PMID:17573778 NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
JBrowse link
G Cdk6 cyclin-dependent kinase 6 involved_in ISO (PMID:10205165) RGD PMID:10205165 NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5314162|PMID:22128142)
UniProt
RGD
PMID:22128142 GO_REF:0000024 MGI:5314162 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:97306 (MGI:3689489|PMID:17053831) RGD PMID:17053831 MGI:3689489 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Dag1 dystroglycan 1 IMP RGD PMID:9153251 RGD:11541058 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Disc1 DISC1 scaffold protein IMP RGD PMID:20479754 RGD:5509803 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:5486568|PMID:12370193) RGD PMID:12370193 MGI:5486568 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Emp2 epithelial membrane protein 2 acts_upstream_of_or_within ISO (PMID:16216233) RGD PMID:16216233 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Epha1 Eph receptor A1 involved_in ISO (PMID:19118217) RGD PMID:19118217 NCBI chr 4:71,246,409...71,260,920
Ensembl chr 4:71,246,409...71,260,846
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:18156211)
GO_REF:0000107
RGD
Ensembl
PMID:18156211 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Ilk integrin-linked kinase IMP RGD PMID:18535176 RGD:2301740 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within ISO MGI:2175913 (MGI:5462513|PMID:22984613) RGD PMID:22984613 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Jup junction plakoglobin involved_in ISO RNAcentral:URS00005A31EB_9606 (PMID:28115160) RGD PMID:28115160 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Ninj1 ninjurin 1 acts_upstream_of_or_within ISO (MGI:4940188|PMID:19557008) RGD PMID:19557008 MGI:4940188 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
JBrowse link
G Plekha2 pleckstrin homology domain containing A2 involved_in ISO (PMID:19786618) RGD PMID:19786618 NCBI chr16:66,938,684...67,000,661 JBrowse link
G Prkcz protein kinase C, zeta IMP vascular smooth muscle cell adhesion to collagen matrix RGD PMID:16113073 RGD:1642674 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO
ISS
(PMID:18765415)
GO_REF:0000024
RGD
UniProt
PMID:18765415 GO_REF:0000024 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (MGI:4942250|PMID:12833140) RGD PMID:12833140 MGI:4942250 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Skap1 src kinase associated phosphoprotein 1 involved_in ISO UniProtKB:P22646 (PMID:12652296) RGD PMID:12652296 NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1857518 (MGI:1321047|PMID:9876177) RGD PMID:9876177 MGI:1321047 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IMP
IDA
RGD PMID:29331667 PMID:29331667 RGD:127284861, RGD:127284861 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Utrn utrophin involved_in ISO
IEA
(PMID:19786618)
GO_REF:0000107
RGD
Ensembl
PMID:19786618 GO_REF:0000107 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within ISO (MGI:4820931|PMID:20415667) RGD PMID:20415667 MGI:4820931 NCBI chr16:37,712,408...37,827,657
Ensembl chr16:37,712,262...37,827,848
JBrowse link
positive regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam6 CEA cell adhesion molecule 6 involved_in ISO (PMID:16204051) RGD PMID:16204051 NCBI chr 1:80,416,531...80,434,668
Ensembl chr 1:80,416,531...80,434,668
JBrowse link
G Dicer1 dicer 1 ribonuclease III IMP RGD PMID:23239824 RGD:149735901 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gfus GDP-L-fucose synthase involved_in ISO (PMID:18205178) RGD PMID:18205178 NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948
JBrowse link
G Rin2 Ras and Rab interactor 2 involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 3:133,086,858...133,303,604
Ensembl chr 3:133,086,749...133,303,604
JBrowse link
G Rras RAS related involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO (PMID:24466237) RGD PMID:24466237 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (MGI:3798334|PMID:18560567) RGD PMID:18560567 MGI:3798334 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
JBrowse link
G Hrg histidine-rich glycoprotein involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:14744774), (PMID:16436387)
Ensembl
UniProt
RGD
PMID:14744774 PMID:16436387 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in ISS
IEA
GO_REF:0000024
GO_REF:0000107
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (MGI:6189265|PMID:25490267) RGD PMID:25490267 MGI:6189265 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
ISO
GO_REF:0000024
(PMID:20016286)
UniProt
RGD
PMID:20016286 GO_REF:0000024 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:21091576) RGD PMID:21091576 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486551|PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 MGI:5486551 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
ISS
(PMID:18346467)
(MGI:3796911|PMID:18346467)
RGD PMID:18346467 PMID:18346467 MGI:3796911, RGD:12793016 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
ISS
(PMID:16489009)
GO_REF:0000024
RGD
UniProt
PMID:16489009 GO_REF:0000024 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107 MGI:5487484 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
positive regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (PMID:23782690) RGD PMID:23782690 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IMP RGD PMID:14970114 RGD:11556214 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    cellular process 18252
      cell adhesion 1402
        positive regulation of cell adhesion 475
          positive regulation of cell-substrate adhesion 145
            positive regulation of cell-matrix adhesion 67
              positive regulation of endothelial cell-matrix adhesion via fibronectin 6
              positive regulation of focal adhesion assembly 31
              positive regulation of smooth muscle cell-matrix adhesion 2
Path 2
Term Annotations click to browse term
  biological_process 19391
    biological regulation 13476
      regulation of biological process 12736
        regulation of cellular process 12198
          regulation of cell adhesion 781
            regulation of cell-substrate adhesion 235
              regulation of cell-matrix adhesion 132
                positive regulation of cell-matrix adhesion 67
                  positive regulation of endothelial cell-matrix adhesion via fibronectin 6
                  positive regulation of focal adhesion assembly 31
                  positive regulation of smooth muscle cell-matrix adhesion 2
paths to the root