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ONTOLOGY REPORT - ANNOTATIONS

Term:lymph vessel development
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Accession:GO:0001945 term browser browse the term
Definition:The process whose specific outcome is the progression of a lymph vessel over time, from its formation to the mature structure.


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lymph vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCBE1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24733830) Ensembl
MGI		 PMID:24733830 GO_REF:0000107 NCBI chr 1:16,597,389...16,819,888
Ensembl chr 1:16,597,334...16,819,894 		JBrowse link
G EFNB2 ephrin B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15687262) Ensembl
MGI		 PMID:15687262 GO_REF:0000107 NCBI chr22:55,567,992...55,609,210
Ensembl chr22:55,566,039...55,609,443 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within		 ISO (MGI:4436974|PMID:19903896)
(PMID:20439428)		 BHF-UCL
MGI		 PMID:19903896 PMID:20439428 MGI:4436974 NCBI chr11:1,145,643...1,184,097
Ensembl chr11:1,145,585...1,185,165 		JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:16678147) MGI PMID:16678147
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:16678147) MGI PMID:16678147 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G HEG1 heart development protein with EGF like domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19151727) Ensembl
MGI		 PMID:19151727 GO_REF:0000107 NCBI chr33:27,982,127...28,044,379
Ensembl chr33:27,987,252...28,044,363 		JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20439428) Ensembl
MGI		 PMID:20439428 GO_REF:0000107 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042 		JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,283,680...52,339,247
Ensembl chr11:52,321,590...52,339,249 		JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 involved_in ISO (MGI:3838672|PMID:19210544) BHF-UCL PMID:19210544 MGI:3838672 NCBI chr 3:44,135,143...44,148,836
Ensembl chr 3:44,136,463...44,148,524 		JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16170315) Ensembl
MGI		 PMID:16170315 GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19515696)
(PMID:291594)		 Ensembl
MGI		 PMID:291594 PMID:19515696 GO_REF:0000107 NCBI chr24:47,494,581...47,496,563
Ensembl chr24:47,494,902...47,496,970 		JBrowse link
G SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28179432) Ensembl
MGI		 PMID:28179432 GO_REF:0000107 NCBI chr11:65,312,723...65,494,014
Ensembl chr11:65,289,087...65,637,974 		JBrowse link
G SYK spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:95,903,501...95,955,577
Ensembl chr 1:95,903,566...95,955,583 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:20439995) MGI PMID:20439995 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784 		JBrowse link
G TMEM204 transmembrane protein 204 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20439428) TreeGrafter
MGI		 PMID:20439428 GO_REF:0000118 NCBI chr 6:39,274,853...39,290,255
Ensembl chr 6:39,275,373...39,289,711 		JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:19233265) MGI PMID:19233265 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588 		JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,838,267...16,857,004
Ensembl chr15:16,838,582...16,856,946 		JBrowse link
lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC490269 complement receptor type 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:6,456,238...6,480,672 JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:24767999) MGI PMID:24767999 NCBI chr 6:38,811,051...38,865,503
Ensembl chr 6:38,837,964...38,865,503 		JBrowse link
G SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28179430)
(PMID:28179432)		 Ensembl
MGI		 PMID:28179430 PMID:28179432 GO_REF:0000107 NCBI chr11:65,312,723...65,494,014
Ensembl chr11:65,289,087...65,637,974 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in ISO (MGI:4461879|PMID:18093989) BHF-UCL PMID:18093989 MGI:4461879 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in ISO (MGI:4436974|PMID:19903896) BHF-UCL PMID:19903896 MGI:4436974 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,075,373...3,090,549
Ensembl chr27:3,076,124...3,092,469 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G CCBE1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21778431) Ensembl
MGI		 PMID:21778431 GO_REF:0000107 NCBI chr 1:16,597,389...16,819,888
Ensembl chr 1:16,597,334...16,819,894 		JBrowse link
G CLEC14A C-type lectin domain containing 14A acts_upstream_of_or_within ISO (PMID:27991863) MGI PMID:27991863 NCBI chr 8:16,609,425...16,612,772
Ensembl chr 8:16,611,240...16,612,709 		JBrowse link
G FLT4 fms related receptor tyrosine kinase 4 involved_in ISO (MGI:5294901|PMID:20697430)
(PMID:19779139)		 UniProt PMID:19779139 PMID:20697430 MGI:5294901 NCBI chr11:1,145,643...1,184,097
Ensembl chr11:1,145,585...1,185,165 		JBrowse link
G FOXC2 forkhead box C2 involved_in ISO (PMID:12114478) UniProt PMID:12114478 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G NFATC1 nuclear factor of activated T cells 1 acts_upstream_of_or_within ISO (PMID:19233265) MGI PMID:19233265 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588 		JBrowse link
G PDPN podoplanin involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12853470) UniProt
MGI		 PMID:12853470 GO_REF:0000024 NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375 		JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19233846) Ensembl
MGI		 PMID:19233846 GO_REF:0000107 NCBI chr 4:23,976,023...24,028,139
Ensembl chr 4:23,977,317...24,028,153 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PTPN14 protein tyrosine phosphatase non-receptor type 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:12,335,327...12,454,992
Ensembl chr 7:12,342,277...12,486,204 		JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18931657) Ensembl
MGI
TreeGrafter		 PMID:18931657 GO_REF:0000107 GO_REF:0000118 NCBI chr24:47,494,581...47,496,563
Ensembl chr24:47,494,902...47,496,970 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19233265)
(PMID:20133819)		 Ensembl
MGI		 PMID:19233265 PMID:20133819 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
lymphatic endothelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in ISO (MGI:4436974|PMID:19903896) BHF-UCL PMID:19903896 MGI:4436974 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,075,373...3,090,549
Ensembl chr27:3,076,124...3,092,469 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056883) Ensembl
MGI		 PMID:19056883 GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G SOX18 SRY-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18931657) Ensembl
MGI		 PMID:18931657 GO_REF:0000107 NCBI chr24:47,494,581...47,496,563
Ensembl chr24:47,494,902...47,496,970 		JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4439415|PMID:20223757) BHF-UCL
Ensembl		 PMID:20223757 GO_REF:0000107 MGI:4439415 NCBI chr15:16,838,267...16,857,004
Ensembl chr15:16,838,582...16,856,946 		JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR2F2 nuclear receptor subfamily 2 group F member 2 involved_in ISO (PMID:18815287) BHF-UCL PMID:18815287 NCBI chr 3:44,135,143...44,148,836
Ensembl chr 3:44,136,463...44,148,524 		JBrowse link
G PDPN podoplanin involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:83,552,735...83,581,375
Ensembl chr 2:83,552,830...83,581,375 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
lymphatic endothelial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCBE1 collagen and calcium binding EGF domains 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21778431) Ensembl
MGI		 PMID:21778431 GO_REF:0000107 NCBI chr 1:16,597,389...16,819,888
Ensembl chr 1:16,597,334...16,819,894 		JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:16291864) MGI PMID:16291864 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G LGALS8 galectin 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:3,548,066...3,581,382
Ensembl chr 4:3,533,200...3,567,311 		JBrowse link
negative regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHA2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19443703) Ensembl
MGI		 PMID:19443703 GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (MGI:5314489|PMID:22171010) UniProt PMID:22171010 MGI:5314489
G VASH1 vasohibin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20133819) MGI
Ensembl		 PMID:20133819 GO_REF:0000107 NCBI chr 8:49,631,029...49,651,693
Ensembl chr 8:49,631,910...49,648,168 		JBrowse link
positive regulation of lymphangiogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCBE1 collagen and calcium binding EGF domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:16,597,389...16,819,888
Ensembl chr 1:16,597,334...16,819,894 		JBrowse link
G MIR9-2 microRNA mir-9-2 acts_upstream_of ISO (PMID:26354749) BHF-UCL PMID:26354749 NCBI chr 3:19,997,697...19,997,756
Ensembl chr 3:19,997,682...19,997,768 		JBrowse link
G MIR9-3 microRNA mir-9-3 acts_upstream_of ISO (PMID:26354749) BHF-UCL PMID:26354749 NCBI chr 3:52,410,840...52,410,900
Ensembl chr 3:52,410,825...52,410,914 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133819) Ensembl
MGI		 PMID:20133819 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
G VEGFC vascular endothelial growth factor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133819) Ensembl
MGI		 PMID:20133819 GO_REF:0000107 NCBI chr16:52,883,242...52,987,684
Ensembl chr16:52,883,139...52,987,563 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure development 6433
        lymph vessel development 35
          lymph vessel morphogenesis + 27
          lymphatic endothelial cell differentiation + 8
          venous endothelial cell migration involved in lymph vessel development 0
Path 2
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure development 6433
        multicellular organism development 5182
          system development 4509
            circulatory system development 1356
              vasculature development 884
                lymph vessel development 35
                  lymph vessel morphogenesis + 27
                  lymphatic endothelial cell differentiation + 8
                  venous endothelial cell migration involved in lymph vessel development 0
paths to the root