Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:tissue homeostasis
go back to main search page
Accession:GO:0001894 term browser browse the term
Definition:A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.
Synonyms:narrow_synonym: tissue maintenance

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17210641) Ensembl
MGI		 PMID:17210641 GO_REF:0000107 NCBI chrNW_004936490:927,769...1,191,483
Ensembl chrNW_004936490:927,769...1,191,481 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B ISO lens opacification RGD PMID:21376710 RGD:8548687 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:17986521) MGI PMID:17986521 NCBI chrNW_004936641:569,002...661,935
Ensembl chrNW_004936641:627,398...661,137 		JBrowse link
G Ascl3 achaete-scute family bHLH transcription factor 3 involved_in ISO (MGI:5050445|PMID:21377457) UniProt PMID:21377457 MGI:5050445 NCBI chrNW_004936528:9,129,722...9,130,521 JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) MGI PMID:30735131 NCBI chrNW_004936581:567,426...576,859
Ensembl chrNW_004936581:567,662...578,267 		JBrowse link
G Ccn2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23839921) Ensembl
MGI		 PMID:23839921 GO_REF:0000107 NCBI chrNW_004936560:42,561...45,748
Ensembl chrNW_004936560:42,537...45,807 		JBrowse link
G Cd34 CD34 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,030,788...5,051,864
Ensembl chrNW_004936557:5,030,441...5,051,868 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11237662) Ensembl
MGI		 PMID:11237662 GO_REF:0000107 NCBI chrNW_004936476:25,663,563...25,692,315
Ensembl chrNW_004936476:25,663,755...25,691,344 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11237662) Ensembl
MGI		 PMID:11237662 GO_REF:0000107 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930 		JBrowse link
G Col9a1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO (PMID:8197187) MGI PMID:8197187 NCBI chrNW_004936618:2,176,328...2,260,000
Ensembl chrNW_004936618:2,176,240...2,260,000 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18635608) Ensembl
MGI		 PMID:18635608 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19439667) Ensembl
MGI		 PMID:19439667 GO_REF:0000107 NCBI chrNW_004936623:2,457,709...2,462,956
Ensembl chrNW_004936623:2,456,294...2,462,467 		JBrowse link
G Hoxa13 homeobox A13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18483557) Ensembl
MGI		 PMID:18483557 GO_REF:0000107 NCBI chrNW_004936478:3,824,715...3,827,277
Ensembl chrNW_004936478:3,824,715...3,827,277 		JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:17118629 RGD:1625131 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 acts_upstream_of_or_within ISO (PMID:12122007) MGI PMID:12122007 NCBI chrNW_004936572:3,396,329...3,425,848
Ensembl chrNW_004936572:3,421,557...3,425,276 		JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 acts_upstream_of_or_within ISO (PMID:20427744) MGI PMID:20427744 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
G Nfib nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32393888) Ensembl
MGI		 PMID:32393888 GO_REF:0000107 NCBI chrNW_004936539:7,763,036...8,185,001
Ensembl chrNW_004936539:7,769,413...7,985,316 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:32393888) MGI PMID:32393888 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829 		JBrowse link
G Perp p53 apoptosis effector related to PMP22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:5,285,071...5,301,253
Ensembl chrNW_004936560:5,284,612...5,301,478 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255 		JBrowse link
G Prlh prolactin releasing hormone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19033670) Ensembl
MGI		 PMID:19033670 GO_REF:0000107 Ensembl chrNW_004936525:770,177...770,863 JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25100735) Ensembl
MGI		 PMID:25100735 GO_REF:0000107 NCBI chrNW_004936565:1,596,227...1,746,706
Ensembl chrNW_004936565:1,597,593...1,746,846 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Stk11 serine/threonine kinase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18381428) Ensembl
MGI		 PMID:18381428 GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654 		JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24713655) Ensembl
MGI		 PMID:24713655 GO_REF:0000107 NCBI chrNW_004936561:5,984,044...5,992,536
Ensembl chrNW_004936561:5,984,079...5,992,536 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19155210) Ensembl
MGI		 PMID:19155210 GO_REF:0000107 NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936758:101,629...225,496
Ensembl chrNW_004936758:101,620...225,525 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:8898228) RGD
TreeGrafter
MGI
Ensembl		 PMID:8898228 PMID:20069278 GO_REF:0000107 GO_REF:0000118 RGD:2315871 NCBI chrNW_004936659:1,598,252...1,642,615
Ensembl chrNW_004936659:1,598,177...1,600,262 		JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15724149) Ensembl
MGI		 PMID:15724149 GO_REF:0000107 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Bbln bublin coiled coil protein acts_upstream_of_or_within ISO (PMID:32569872) MGI PMID:32569872 NCBI chrNW_004936487:15,728,776...15,732,065
Ensembl chrNW_004936487:15,728,778...15,732,065 		JBrowse link
G Ccdc154 coiled-coil domain containing 154 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20121924) Ensembl
MGI		 PMID:20121924 GO_REF:0000107 NCBI chrNW_004936694:2,468,281...2,475,901
Ensembl chrNW_004936694:2,468,281...2,475,487 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15866165) Ensembl
MGI		 PMID:15866165 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Ctsk cathepsin K acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19834056) RGD
MGI
Ensembl		 PMID:10430032 PMID:19834056 GO_REF:0000107 RGD:1601030 NCBI chrNW_004936580:1,022,762...1,038,020
Ensembl chrNW_004936580:1,022,762...1,034,984 		JBrowse link
G Ctss cathepsin S ISO RGD PMID:10470376 RGD:5687153 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:28798354) MGI PMID:28798354 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29415886) Ensembl
MGI		 PMID:29415886 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118 		JBrowse link
G Gpr55 G protein-coupled receptor 55 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,869,416...5,888,789
Ensembl chrNW_004936525:5,869,416...5,888,789 		JBrowse link
G Hnf1a HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15866165) Ensembl
MGI		 PMID:15866165 GO_REF:0000107 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Iapp islet amyloid polypeptide involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14970190) Ensembl
MGI		 PMID:14970190 GO_REF:0000107 NCBI chrNW_004936548:5,463,829...5,469,136
Ensembl chrNW_004936548:5,463,828...5,469,139 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10208865) Ensembl
MGI		 PMID:10208865 GO_REF:0000107 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568 		JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490655) Ensembl
MGI		 PMID:12490655 GO_REF:0000107 NCBI chrNW_004936702:110,625...162,957
Ensembl chrNW_004936702:111,211...162,322 		JBrowse link
G Lrrk1 leucine rich repeat kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23526378) Ensembl
MGI		 PMID:23526378 GO_REF:0000107 NCBI chrNW_004936483:2,771,939...2,922,793
Ensembl chrNW_004936483:2,771,938...2,924,525 		JBrowse link
G Ncdn neurochondrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10231559) Ensembl
MGI		 PMID:10231559 GO_REF:0000107 NCBI chrNW_004936474:18,110,143...18,119,347
Ensembl chrNW_004936474:18,110,113...18,119,341 		JBrowse link
G Nox4 NADPH oxidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11098048) Ensembl
MGI		 PMID:11098048 GO_REF:0000107 NCBI chrNW_004936736:230,465...394,859
Ensembl chrNW_004936736:230,476...396,708 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9832460) Ensembl
MGI		 PMID:9832460 GO_REF:0000107 NCBI chrNW_004936596:674,088...693,191
Ensembl chrNW_004936596:674,088...693,213 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810 		JBrowse link
G Rab3d RAB3D, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,429,562...1,438,876
Ensembl chrNW_004936659:1,428,745...1,438,659 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO RGD PMID:11514537 RGD:729760 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:10350213 RGD:1599401 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rac2 Rac family small GTPase 2 ISO RGD PMID:10350213 RGD:1599401 NCBI chrNW_004936492:3,726,375...3,737,961
Ensembl chrNW_004936492:3,726,313...3,736,905 		JBrowse link
G Snx10 sorting nexin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25811986) Ensembl
MGI		 PMID:25811986 GO_REF:0000107 NCBI chrNW_004936478:3,048,801...3,113,610
Ensembl chrNW_004936478:3,048,691...3,114,876 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19448635) Ensembl
TreeGrafter
MGI		 PMID:19448635 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23166162), (PMID:23908015)
(PMID:21305608)
(PMID:18768394), (PMID:22087326)		 Ensembl
MGI		 PMID:18768394 PMID:21305608 PMID:22087326 PMID:23166162 PMID:23908015 GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12490655) Ensembl
MGI		 PMID:12490655 GO_REF:0000107 NCBI chrNW_004936747:1,255,803...1,288,252
Ensembl chrNW_004936747:1,255,803...1,288,252 		JBrowse link
G Tns3 tensin 3 acts_upstream_of_or_within ISO (PMID:27505886) MGI PMID:27505886 NCBI chrNW_004936478:21,784,486...21,924,240
Ensembl chrNW_004936478:21,786,120...21,924,221 		JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:669,869...676,706
Ensembl chrNW_004936842:669,863...676,720 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
cartilage homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comp cartilage oligomeric matrix protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,544,389...2,551,155
Ensembl chrNW_004936596:2,544,389...2,551,164 		JBrowse link
G Cytl1 cytokine like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21652695) Ensembl
MGI		 PMID:21652695 GO_REF:0000107 NCBI chrNW_004936477:17,508,833...17,512,608
Ensembl chrNW_004936477:17,508,823...17,512,663 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:32227389) MGI
Ensembl		 PMID:32227389 GO_REF:0000107 NCBI chrNW_004936708:238,302...362,537
Ensembl chrNW_004936708:238,268...362,519 		JBrowse link
G Mtf1 metal regulatory transcription factor 1 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5577232|PMID:24529376) UniProt
Ensembl		 PMID:24529376 GO_REF:0000107 MGI:5577232 NCBI chrNW_004936474:19,981,483...20,027,541
Ensembl chrNW_004936474:19,981,466...20,027,536 		JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:5577232|PMID:24529376)
(PMID:24529376)		 UniProt
Ensembl		 PMID:24529376 GO_REF:0000107 MGI:5577232 NCBI chrNW_004936520:961,376...1,036,801
Ensembl chrNW_004936520:962,756...1,037,274 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:24474754) AgBase PMID:24474754 NCBI chrNW_004936769:1,424,526...1,447,547
Ensembl chrNW_004936769:1,424,549...1,447,516 		JBrowse link
epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics involved_in ISO (MGI:6271776|PMID:30361697) UniProt PMID:30361697 MGI:6271776 NCBI chrNW_004936482:18,309,078...18,557,335 JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870283) Ensembl
MGI		 PMID:15870283 GO_REF:0000107 NCBI chrNW_004936474:3,918,237...3,958,635
Ensembl chrNW_004936474:3,918,919...3,958,229 		JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:9,971,393...10,032,238
Ensembl chrNW_004936505:9,971,118...10,032,238 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:21849460) UniProt PMID:21849460 NCBI chrNW_004936833:551,989...843,064
Ensembl chrNW_004936833:551,799...844,121 		JBrowse link
G Ildr1 immunoglobulin like domain containing receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,351,394...8,383,857
Ensembl chrNW_004936536:8,351,359...8,383,907 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991461) Ensembl
MGI		 PMID:17991461 GO_REF:0000107 NCBI chrNW_004936600:3,714,630...3,728,813
Ensembl chrNW_004936600:3,714,095...3,728,815 		JBrowse link
G Ldb2 LIM domain binding 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991461) Ensembl
MGI		 PMID:17991461 GO_REF:0000107 NCBI chrNW_004936477:11,199,200...11,538,699
Ensembl chrNW_004936477:11,199,003...11,538,728 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,023,967...1,038,223
Ensembl chrNW_004936570:1,023,960...1,038,587 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21045211)
(PMID:23454480)
(PMID:19776033)		 Ensembl
MGI		 PMID:19776033 PMID:21045211 PMID:23454480 GO_REF:0000107 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:28025795) UniProt PMID:28025795 NCBI chrNW_004936674:355,302...402,388 JBrowse link
G Pkp3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:270,883...280,118
Ensembl chrNW_004936888:270,873...280,121 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:21849460) UniProt PMID:21849460 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864 		JBrowse link
G Srf serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20047077) Ensembl
MGI		 PMID:20047077 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
homeostasis of number of cells within a tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18723693) Ensembl
MGI		 PMID:18723693 GO_REF:0000107 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152 		JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15713641) Ensembl
MGI		 PMID:15713641 GO_REF:0000107 NCBI chrNW_004936526:6,944,056...7,201,226
Ensembl chrNW_004936526:6,944,005...7,200,583 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11413548)
(PMID:15342910)		 Ensembl
MGI		 PMID:11413548 PMID:15342910 GO_REF:0000107 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820 		JBrowse link
G Bcl2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9241272)
(PMID:16427619)		 Ensembl
MGI		 PMID:9241272 PMID:16427619 GO_REF:0000107 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:29960053) MGI
Ensembl		 PMID:29960053 GO_REF:0000107 NCBI chrNW_004936487:7,845,799...8,019,167
Ensembl chrNW_004936487:7,845,351...8,019,190 		JBrowse link
G Cd7 CD7 molecule acts_upstream_of_or_within ISO (PMID:9637484) MGI PMID:9637484 NCBI chrNW_004936594:5,777,361...5,783,533 JBrowse link
G Col14a1 collagen type XIV alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22906538) Ensembl
MGI		 PMID:22906538 GO_REF:0000107 NCBI chrNW_004936470:26,440,606...26,643,015
Ensembl chrNW_004936470:26,440,615...26,643,015 		JBrowse link
G Coro1a coronin 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18836449) Ensembl
MGI		 PMID:18836449 GO_REF:0000107 NCBI chrNW_004936501:12,338,542...12,344,236
Ensembl chrNW_004936501:12,338,542...12,344,265 		JBrowse link
G Csf1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9215625) Ensembl
MGI		 PMID:9215625 GO_REF:0000107 NCBI chrNW_004936704:1,372,137...1,393,355
Ensembl chrNW_004936704:1,378,103...1,393,542 		JBrowse link
G F2r coagulation factor II thrombin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18305483) Ensembl
MGI		 PMID:18305483 GO_REF:0000107 NCBI chrNW_004936549:226,508...247,024
Ensembl chrNW_004936549:225,371...247,042 		JBrowse link
G Fh fumarate hydratase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17418408) Ensembl
MGI		 PMID:17418408 GO_REF:0000107 NCBI chrNW_004936526:8,936,096...8,965,155
Ensembl chrNW_004936526:8,935,991...8,965,367 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:22674806)
(PMID:20457904)		 MGI PMID:20457904 PMID:22674806 NCBI chrNW_004936472:23,169,967...23,239,178
Ensembl chrNW_004936472:23,170,470...23,256,904 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:21048959) MGI PMID:21048959 NCBI chrNW_004936664:3,343,541...3,351,590
Ensembl chrNW_004936664:3,343,491...3,350,176 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24464219)
(PMID:33655757)		 Ensembl
MGI		 PMID:24464219 PMID:33655757 GO_REF:0000107 NCBI chrNW_004936493:4,308,683...4,327,102
Ensembl chrNW_004936493:4,304,395...4,327,179 		JBrowse link
G Gata1 GATA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14504093) Ensembl
MGI		 PMID:14504093 GO_REF:0000107 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768 		JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14504093)
(PMID:15811962)		 Ensembl
MGI		 PMID:14504093 PMID:15811962 GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19744960) Ensembl
MGI		 PMID:19744960 GO_REF:0000107 NCBI chrNW_004936525:4,301,003...4,432,125
Ensembl chrNW_004936525:4,304,629...4,403,089 		JBrowse link
G Il7 interleukin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9252127) Ensembl
MGI		 PMID:9252127 GO_REF:0000107 NCBI chrNW_004936702:110,625...162,957
Ensembl chrNW_004936702:111,211...162,322 		JBrowse link
G Ildr2 immunoglobulin like domain containing receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18654634) Ensembl
MGI		 PMID:18654634 GO_REF:0000107 NCBI chrNW_004936481:18,938,658...18,994,197
Ensembl chrNW_004936481:18,939,043...18,991,235 		JBrowse link
G Klhl10 kelch like family member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15136734) Ensembl
MGI		 PMID:15136734 GO_REF:0000107 NCBI chrNW_004936490:16,737,241...16,747,801
Ensembl chrNW_004936490:16,737,252...16,745,586 		JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22674806) Ensembl
MGI		 PMID:22674806 GO_REF:0000107 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147 		JBrowse link
G Kras KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24675817) Ensembl
MGI		 PMID:24675817 GO_REF:0000107 NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101964770 C-C chemokine receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:285,559...287,198
Ensembl chrNW_004936596:285,559...286,680 		JBrowse link
G LOC101972766 tubulin alpha-1A chain involved_in ISO (PMID:21875651) MGI PMID:21875651 NCBI chrNW_004936512:6,959,656...6,964,299
Ensembl chrNW_004936512:6,958,985...6,964,299 		JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:35727972) MGI
Ensembl		 PMID:35727972 GO_REF:0000107 NCBI chrNW_004936504:2,830,286...2,847,785
Ensembl chrNW_004936504:2,830,236...2,847,847 		JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:25331604)
(PMID:27965439)		 MGI PMID:25331604 PMID:27965439 NCBI chrNW_004936659:2,065,410...2,136,898
Ensembl chrNW_004936659:2,065,458...2,136,889 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936630:1,601,006...1,633,844
Ensembl chrNW_004936630:1,601,010...1,632,745 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16969386) Ensembl
MGI		 PMID:16969386 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622394) Ensembl
MGI		 PMID:18622394 GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Pth parathyroid hormone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21048959) Ensembl
MGI		 PMID:21048959 GO_REF:0000107 NCBI chrNW_004936528:5,081,569...5,084,030
Ensembl chrNW_004936528:5,083,596...5,084,030 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24675817) Ensembl
MGI		 PMID:24675817 GO_REF:0000107 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676 		JBrowse link
G Rac3 Rac family small GTPase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23258346) Ensembl
MGI		 PMID:23258346 GO_REF:0000107 NCBI chrNW_004936594:5,527,788...5,530,694
Ensembl chrNW_004936594:5,528,908...5,531,420 		JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO (PMID:15965476) MGI PMID:15965476 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16227612) Ensembl
MGI		 PMID:16227612 GO_REF:0000107 NCBI chrNW_004936479:1,752,180...1,765,330
Ensembl chrNW_004936479:1,750,746...1,765,361 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23680462) Ensembl
MGI		 PMID:23680462 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24218621) Ensembl
MGI		 PMID:24218621 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO (PMID:18283110) MGI PMID:18283110 NCBI chrNW_004936792:668,290...727,197
Ensembl chrNW_004936792:668,290...686,241 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22886301) Ensembl
MGI		 PMID:22886301 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8815872) Ensembl
MGI		 PMID:8815872 GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711 		JBrowse link
homeostasis of number of retina cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27715390) MGI
Ensembl		 PMID:27715390 GO_REF:0000107 NCBI chrNW_004936517:841,402...941,054
Ensembl chrNW_004936517:841,411...939,581 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23580486) Ensembl
MGI		 PMID:23580486 GO_REF:0000107 NCBI chrNW_004936704:1,079,255...1,093,732
Ensembl chrNW_004936704:1,084,587...1,093,691 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
inhibition of non-skeletal tissue mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc6 ATP binding cassette subfamily C member 6 involved_in ISO (PMID:24732453)
(PMID:28652107)		 MGI PMID:24732453 PMID:28652107 NCBI chrNW_004936501:3,469,928...3,508,577 JBrowse link
G Alpl alkaline phosphatase, biomineralization associated involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,209,196...7,229,899
Ensembl chrNW_004936474:7,209,093...7,229,989 		JBrowse link
G Ankh ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936665:1,520,800...1,654,388
Ensembl chrNW_004936665:1,520,800...1,653,816 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23798568), (PMID:26624227), (PMID:26763447), (PMID:27959908), (PMID:28402956), (PMID:28652107)
(PMID:24732453)
(PMID:21490328)
(PMID:15625282)
(PMID:25644539)		 MGI PMID:15625282 PMID:21490328 PMID:23798568 PMID:24732453 PMID:25644539 More... NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:5,797,218...5,846,118
Ensembl chrNW_004936510:5,797,212...5,846,124 		JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10ra interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,099,484...3,113,159
Ensembl chrNW_004936542:3,099,430...3,113,210 		JBrowse link
G Il17a interleukin 17A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:8,621,860...8,625,008
Ensembl chrNW_004936476:8,621,860...8,625,008 		JBrowse link
G Inava innate immunity activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,443,053...3,458,184
Ensembl chrNW_004936567:3,443,042...3,464,506 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17681175) Ensembl
MGI		 PMID:17681175 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095 		JBrowse link
G Znf830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23213458) Ensembl
MGI		 PMID:23213458 GO_REF:0000107 NCBI chrNW_004936538:243,557...245,353
Ensembl chrNW_004936538:244,188...245,300 		JBrowse link
maintenance of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:26830080 RGD:11041002 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427 		JBrowse link
G Bdkrb2 bradykinin receptor B2 ISO RGD PMID:20080302 RGD:4891047 NCBI chrNW_004936604:548,844...551,031
Ensembl chrNW_004936604:548,847...549,956 		JBrowse link
G Cd2ap CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26358779) Ensembl
MGI		 PMID:26358779 GO_REF:0000107 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Cldn5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,455,508...3,457,053
Ensembl chrNW_004936619:3,456,166...3,456,822 		JBrowse link
G Mbp myelin basic protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936616:2,082,154...2,159,028
Ensembl chrNW_004936616:2,082,099...2,159,070 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6196220|PMID:30074985)
(PMID:30074985)		 ARUK-UCL
Ensembl		 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chrNW_004936474:21,790,807...21,803,336
Ensembl chrNW_004936474:21,790,747...21,803,360 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21408219) Ensembl
MGI		 PMID:21408219 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 ISO RGD PMID:17704356 RGD:2325928 NCBI chrNW_004936487:10,745,465...10,758,812
Ensembl chrNW_004936487:10,745,327...10,758,823 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:17704356 RGD:2325928 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:6392927|PMID:28577991)
(PMID:28577991)		 ARUK-UCL PMID:28577991 MGI:6392927 NCBI chrNW_004936504:1,378,812...1,465,463
Ensembl chrNW_004936504:1,378,810...1,465,623 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6393184|PMID:25350110) ARUK-UCL
Ensembl		 PMID:25350110 GO_REF:0000107 MGI:6393184 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721 		JBrowse link
G Tspan12 tetraspanin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30478038) Ensembl
MGI		 PMID:30478038 GO_REF:0000107 NCBI chrNW_004936605:4,265,475...4,338,518
Ensembl chrNW_004936605:4,265,316...4,338,526 		JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6221361|PMID:27782176)
(PMID:27782176)		 ARUK-UCL
Ensembl		 PMID:27782176 GO_REF:0000107 MGI:6221361 NCBI chrNW_004936751:1,095,578...1,266,772
Ensembl chrNW_004936751:1,100,192...1,266,740 		JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:18,309,078...18,557,335 JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:6,146,974...6,306,000
Ensembl chrNW_004936504:6,146,974...6,265,631 		JBrowse link
G LOC101961439 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:3,538,813...3,555,562
Ensembl chrNW_004936529:3,538,862...3,555,593 		JBrowse link
G LOC101977445 trefoil factor 3-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936500:1,551,524...1,554,379
Ensembl chrNW_004936500:1,551,524...1,571,352 		JBrowse link
G Muc13 mucin 13, cell surface associated involved_in ISO (PMID:17058067) UniProt PMID:17058067 NCBI chrNW_004936725:381,006...400,333 JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming involved_in ISO (PMID:17058067)
(MGI:6471838|PMID:33093110), (PMID:35337837)		 UniProt PMID:17058067 PMID:33093110 PMID:35337837 MGI:6471838 NCBI chrNW_004936816:60,499...91,628
Ensembl chrNW_004936816:60,499...91,628 		JBrowse link
G Muc4 mucin 4, cell surface associated involved_in ISO (PMID:17058067) UniProt PMID:17058067 NCBI chrNW_004936784:515,608...539,915 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
G Pbld phenazine biosynthesis like protein domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,943,061...9,998,421
Ensembl chrNW_004936521:9,984,783...9,998,858 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936587:1,679,570...1,700,610
Ensembl chrNW_004936587:1,678,439...1,701,216 		JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21991385) InterPro
TreeGrafter
MGI		 PMID:21991385 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936499:6,708,049...6,738,358
Ensembl chrNW_004936499:6,708,049...6,738,306 		JBrowse link
maintenance of lens transparency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:15623782 UniProt PMID:15623782 RGD:2306321 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 involved_in ISO (MGI:5648704|PMID:25757569) UniProt PMID:25757569 MGI:5648704 NCBI chrNW_004936482:8,166,380...8,489,489 JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964
Ensembl chrNW_004936561:6,756,307...6,799,290 		JBrowse link
G LOC101978685 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:2,311,217...2,366,327
Ensembl chrNW_004936534:2,309,480...2,388,249 		JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23272068) Ensembl
MGI		 PMID:23272068 GO_REF:0000107 NCBI chrNW_004936816:129,926...159,396 JBrowse link
G Stk39 serine/threonine kinase 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:11,274,398...11,516,244
Ensembl chrNW_004936469:11,274,409...11,516,752 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:43,281,905...43,952,523
Ensembl chrNW_004936470:43,281,469...43,951,805 		JBrowse link
negative regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:18854840 RGD:2325137 NCBI chrNW_004936528:1,608,782...1,682,873
Ensembl chrNW_004936528:1,608,757...1,682,975 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:12973019 PMID:12973022 RGD:401851924 RGD:401851925 NCBI chrNW_004936652:2,736,270...2,736,833 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
negative regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin related polypeptide alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:3,800,801...3,806,000
Ensembl chrNW_004936528:3,800,577...3,805,004 		JBrowse link
G Cartpt CART prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:4,717,337...4,719,523
Ensembl chrNW_004936549:4,717,771...4,719,395 		JBrowse link
G Cd38 CD38 molecule ISO RGD PMID:10477767 RGD:2307268 NCBI chrNW_004936477:12,109,761...12,156,037
Ensembl chrNW_004936477:12,108,742...12,156,248 		JBrowse link
G Cldn18 claudin 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22437732) Ensembl
MGI		 PMID:22437732 GO_REF:0000107 NCBI chrNW_004936540:373,889...401,535
Ensembl chrNW_004936540:373,889...401,535 		JBrowse link
G Csk C-terminal Src kinase ISO RGD PMID:10411542 RGD:5134371 NCBI chrNW_004936471:33,757,778...33,777,871
Ensembl chrNW_004936471:33,757,772...33,778,933 		JBrowse link
G Fshr follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11089565), (PMID:17332067) Ensembl
MGI		 PMID:11089565 PMID:17332067 GO_REF:0000107 NCBI chrNW_004936508:3,601,205...3,754,234
Ensembl chrNW_004936508:3,601,315...3,753,706 		JBrowse link
G Gpr137 G protein-coupled receptor 137 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:4,920,347...4,923,655
Ensembl chrNW_004936599:4,919,897...4,923,655 		JBrowse link
G Gpr137b G protein-coupled receptor 137B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:16,539,076...16,578,606
Ensembl chrNW_004936484:16,542,993...16,578,612 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24561287) Ensembl
MGI		 PMID:24561287 GO_REF:0000107 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Iapp islet amyloid polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14970190) Ensembl
MGI		 PMID:14970190 GO_REF:0000107 NCBI chrNW_004936548:5,463,829...5,469,136
Ensembl chrNW_004936548:5,463,828...5,469,139 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:5795829|PMID:11159963) BHF-UCL PMID:11159963 MGI:5795829 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12161749) Ensembl
TreeGrafter
MGI		 PMID:12161749 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936525:4,046,609...4,154,715
Ensembl chrNW_004936525:4,048,492...4,154,618 		JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:25490771) MGI PMID:25490771 NCBI chrNW_004936706:37,480...53,306 JBrowse link
G LOC101954950 aromatase ISO RGD PMID:8694895 RGD:7257714 NCBI chrNW_004936471:13,107,603...13,136,910
Ensembl chrNW_004936471:13,107,603...13,136,910 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12677010) Ensembl
MGI		 PMID:12677010 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO (MGI:5543589|PMID:22416756) ARUK-UCL PMID:22416756 MGI:5543589 NCBI chrNW_004936769:513,695...515,769 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO RGD PMID:11839361 PMID:16912914 RGD:1624170 RGD:730196 NCBI chrNW_004936470:27,571,263...27,598,725
Ensembl chrNW_004936470:27,571,270...27,599,089 		JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23149425) Ensembl
TreeGrafter
MGI		 PMID:23149425 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:7,225,387...7,370,163
Ensembl chrNW_004936542:7,225,977...7,373,381 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:15312247 RGD:1580559 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11431429) Ensembl
MGI		 PMID:11431429 GO_REF:0000107 NCBI chrNW_004936537:4,969,456...5,326,682
Ensembl chrNW_004936537:5,202,093...5,323,527 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:14740321) HGNC-UCL PMID:14740321 NCBI chrNW_004936469:8,653,031...9,209,840 JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:69165|PMID:7525597)
(PMID:7525597)		 ARUK-UCL
Ensembl		 PMID:7525597 GO_REF:0000107 MGI:69165 NCBI chrNW_004936595:908,019...914,426
Ensembl chrNW_004936595:907,919...915,053 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,059,274...3,076,853
Ensembl chrNW_004936599:3,059,148...3,076,299 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:4,640,611...4,644,627
Ensembl chrNW_004936568:4,638,637...4,644,502 		JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22869374), (PMID:22958920) Ensembl
TreeGrafter
MGI		 PMID:22869374 PMID:22958920 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936662:1,822,727...1,832,403
Ensembl chrNW_004936662:1,830,137...1,832,263 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15539463) Ensembl
MGI		 PMID:15539463 GO_REF:0000107 NCBI chrNW_004936475:8,785,914...8,810,490
Ensembl chrNW_004936475:8,785,154...8,810,541 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23943788)
(PMID:17591906), (PMID:20398886), (PMID:23943788)
(PMID:16794820), (PMID:21444805)		 Ensembl
MGI		 PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Bsg basigin (Ok blood group) involved_in ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)		 UniProt PMID:25957687 MGI:6436439 NCBI chrNW_004936588:181,688...189,795
Ensembl chrNW_004936588:181,576...189,287 		JBrowse link
G Cdhr1 cadherin related family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11738025) Ensembl
MGI		 PMID:11738025 GO_REF:0000107 NCBI chrNW_004936767:805,910...829,838
Ensembl chrNW_004936767:805,558...827,712 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:23943788) MGI PMID:23943788 NCBI chrNW_004936507:5,223,756...5,305,392
Ensembl chrNW_004936507:5,221,910...5,305,422 		JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:36,859,018...36,879,170
Ensembl chrNW_004936471:36,859,018...36,878,878 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11182090) Ensembl
MGI		 PMID:11182090 GO_REF:0000107 NCBI chrNW_004936516:1,678,610...1,760,099
Ensembl chrNW_004936516:1,678,653...1,760,294 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15565184), (PMID:9151333) Ensembl
MGI		 PMID:9151333 PMID:15565184 GO_REF:0000107 NCBI chrNW_004936615:993,092...999,976
Ensembl chrNW_004936615:985,634...1,003,172 		JBrowse link
G Clrn1 clarin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936758:1,250,831...1,286,016
Ensembl chrNW_004936758:1,250,769...1,285,376 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO (PMID:15634774) MGI PMID:15634774 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Crb1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588), (PMID:25147295) Ensembl
MGI		 PMID:17234588 PMID:25147295 GO_REF:0000107 NCBI chrNW_004936567:6,347,661...6,559,731
Ensembl chrNW_004936567:6,366,489...6,559,766 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934 		JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15870283) Ensembl
MGI		 PMID:15870283 GO_REF:0000107 NCBI chrNW_004936474:3,918,237...3,958,635
Ensembl chrNW_004936474:3,918,919...3,958,229 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:37691820) Ensembl
TreeGrafter
MGI		 PMID:37691820 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936704:2,488,370...2,513,042
Ensembl chrNW_004936704:2,490,902...2,505,547 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17145777) Ensembl
MGI		 PMID:17145777 GO_REF:0000107 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690 		JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO (MGI:4457950|PMID:20534447) UniProt PMID:20534447 MGI:4457950 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Iqcb1 IQ motif containing B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,164,120...8,213,690
Ensembl chrNW_004936536:8,163,554...8,213,708 		JBrowse link
G Lca5 lebercilin LCA5 acts_upstream_of_or_within ISO (PMID:21606596) MGI PMID:21606596 NCBI chrNW_004936510:10,652,378...10,702,761
Ensembl chrNW_004936510:10,671,297...10,703,618 		JBrowse link
G LOC101969963 cadherin-23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:7,078,874...7,285,361
Ensembl chrNW_004936521:7,010,360...7,340,842 		JBrowse link
G Mak male germ cell associated kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21148103) Ensembl
MGI		 PMID:21148103 GO_REF:0000107 NCBI chrNW_004936534:2,170,853...2,239,647
Ensembl chrNW_004936534:2,170,794...2,224,065 		JBrowse link
G Map1a microtubule associated protein 1A acts_upstream_of_or_within ISO (PMID:22323461) MGI PMID:22323461 NCBI chrNW_004936471:6,685,565...6,706,860
Ensembl chrNW_004936471:6,685,728...6,705,477 		JBrowse link
G Mdm1 Mdm1 nuclear protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:6,261,887...6,294,487
Ensembl chrNW_004936545:6,261,875...6,294,621 		JBrowse link
G Mkks MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16170314)
(PMID:15772095)		 Ensembl
MGI		 PMID:15772095 PMID:16170314 GO_REF:0000107 NCBI chrNW_004936485:9,089,118...9,114,396
Ensembl chrNW_004936485:9,088,963...9,115,175 		JBrowse link
G Nphp3 nephrocystin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,013,321...6,048,249
Ensembl chrNW_004936529:6,009,301...6,049,447 		JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO (PMID:21078623) MGI PMID:21078623 NCBI chrNW_004936623:802,152...904,198 JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) HGNC-UCL PMID:11398101 NCBI chrNW_004936910:233,800...602,145
Ensembl chrNW_004936910:141,917...602,089 		JBrowse link
G Pde6a phosphodiesterase 6A acts_upstream_of_or_within ISO (PMID:22183357) MGI PMID:22183357 NCBI chrNW_004936504:5,018,171...5,088,333
Ensembl chrNW_004936504:5,018,064...5,092,024 		JBrowse link
G Prom1 prominin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:11,878,261...12,017,228
Ensembl chrNW_004936477:11,878,012...12,018,177 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22183357) Ensembl
MGI		 PMID:22183357 GO_REF:0000107 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:3604930|PMID:16126734)
(PMID:16126734)		 UniProt PMID:16126734 MGI:3604930 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Rp1l1 RP1 like 1 involved_in ISO (PMID:23281133)
(MGI:4353917|PMID:19657028)		 BHF-UCL
UniProt		 PMID:19657028 PMID:23281133 MGI:4353917 NCBI chrNW_004936675:2,527,406...2,564,464 JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:15,878,167...15,911,301
Ensembl chrNW_004936488:15,878,158...15,911,415 		JBrowse link
G Tub TUB bipartite transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10629044) Ensembl
MGI		 PMID:10629044 GO_REF:0000107 NCBI chrNW_004936528:9,829,889...9,912,645
Ensembl chrNW_004936528:9,834,954...9,855,080 		JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10549638), (PMID:17525220)
(PMID:22183357)
(PMID:10607826)		 Ensembl
MGI		 PMID:10549638 PMID:10607826 PMID:17525220 PMID:22183357 GO_REF:0000107 NCBI chrNW_004936476:23,744,707...23,757,002
Ensembl chrNW_004936476:23,744,757...23,756,565 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:1,552,175...1,594,740
Ensembl chrNW_004936528:1,552,289...1,594,801 		JBrowse link
G Ush1g USH1 protein network component sans involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:258,115...262,739
Ensembl chrNW_004936594:259,030...262,778 		JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17360538) Ensembl
MGI		 PMID:17360538 GO_REF:0000107 NCBI chrNW_004936628:2,123,917...2,859,958
Ensembl chrNW_004936628:2,123,957...2,858,872 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:1,031,328...1,119,344
Ensembl chrNW_004936651:1,037,804...1,119,399 		JBrowse link
positive regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190 		JBrowse link
G Ocln occludin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:99,516...152,834
Ensembl chrNW_004936480:98,371...152,413 		JBrowse link
G Tjp1 tight junction protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946 		JBrowse link
G Tjp2 tight junction protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936503:5,414,330...5,539,895
Ensembl chrNW_004936503:5,497,832...5,539,090 		JBrowse link
G Tjp3 tight junction protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:2,112,352...2,124,204
Ensembl chrNW_004936588:2,100,712...2,124,107 		JBrowse link
positive regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332 		JBrowse link
G Ahsg alpha 2-HS glycoprotein ISO RGD PMID:10500999 RGD:1625797 NCBI chrNW_004936578:3,332,934...3,339,903
Ensembl chrNW_004936578:3,332,934...3,339,903 		JBrowse link
G Ca2 carbonic anhydrase 2 ISO RGD PMID:8674544 RGD:1600722 NCBI chrNW_004936544:362,591...379,151
Ensembl chrNW_004936544:362,591...380,223 		JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,664,573...39,671,532
Ensembl chrNW_004936470:39,664,511...39,671,532 		JBrowse link
G Def8 differentially expressed in FDCP 8 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:158,115...174,524
Ensembl chrNW_004936641:157,931...174,536 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:21308776) MGI PMID:21308776 NCBI chrNW_004936604:4,504,519...4,511,897
Ensembl chrNW_004936604:4,504,503...4,511,910 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:2981075 RGD:10395245 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Fshb follicle stimulating hormone subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16630814) Ensembl
MGI		 PMID:16630814 GO_REF:0000107 NCBI chrNW_004936533:7,395,206...7,397,266
Ensembl chrNW_004936533:7,395,206...7,397,266 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:8603604 RGD:5024929 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035 		JBrowse link
G LOC101955076 low affinity immunoglobulin gamma Fc region receptor III-A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937131:42,523...49,533 JBrowse link
G LOC101970551 inhibitor of carbonic anhydrase involved_in ISO (MGI:3838421|PMID:19252502)
(PMID:19252502)		 DFLAT PMID:19252502 MGI:3838421 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G LOC101970831 serotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:6,917,762...6,947,512
Ensembl chrNW_004936529:6,855,958...6,947,394 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18505367) MGI PMID:18505367 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15878314) Ensembl
MGI		 PMID:15878314 GO_REF:0000107 NCBI chrNW_004936599:3,902,903...3,918,471
Ensembl chrNW_004936599:3,902,897...3,918,471 		JBrowse link
G Mc4r melanocortin 4 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:4,636,370...4,638,205
Ensembl chrNW_004936497:4,636,758...4,637,759 		JBrowse link
G Oscar osteoclast associated Ig-like receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11805147) Ensembl
MGI		 PMID:11805147 GO_REF:0000107 NCBI chrNW_004936994:226,318...232,143
Ensembl chrNW_004936994:226,424...312,143 		JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,685,902...1,732,361
Ensembl chrNW_004936541:1,685,923...1,732,420 		JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,099,334...5,198,279
Ensembl chrNW_004936504:5,099,470...5,198,584 		JBrowse link
G Prkca protein kinase C alpha involved_in ISO (MGI:5284791|PMID:16014375) BHF-UCL PMID:16014375 MGI:5284791 NCBI chrNW_004936541:6,231,604...6,488,201
Ensembl chrNW_004936541:6,233,110...6,488,052 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:11792579 RGD:729815 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11792563 GO_REF:0000118 RGD:1581129 NCBI chrNW_004936905:148,956...156,023
Ensembl chrNW_004936905:148,945...156,079 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:8514886 RGD:150524326 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936780:1,553,605...1,601,036
Ensembl chrNW_004936780:1,553,605...1,598,158 		JBrowse link
G Tfrc transferrin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:696,738...728,385
Ensembl chrNW_004936784:696,713...728,543 		JBrowse link
G Tmem64 transmembrane protein 64 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23395171) Ensembl
TreeGrafter
MGI		 PMID:23395171 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936544:4,326,083...4,347,809
Ensembl chrNW_004936544:4,329,665...4,348,530 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11805147) Ensembl
TreeGrafter
MGI		 PMID:11805147 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO
IEA		 RGD
Ensembl		 PMID:11092398 GO_REF:0000107 RGD:730134 NCBI chrNW_004936747:1,255,803...1,288,252
Ensembl chrNW_004936747:1,255,803...1,288,252 		JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,774,063...2,798,585
Ensembl chrNW_004936647:2,773,768...2,798,511 		JBrowse link
regulation of apoptosis involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdx5 peroxiredoxin 5 involved_in ISO (PMID:15276323) UniProt PMID:15276323 NCBI chrNW_004936599:4,894,409...4,897,426
Ensembl chrNW_004936599:4,894,409...4,897,223 		JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:6,677,533...6,724,800
Ensembl chrNW_004936479:6,677,526...6,722,116 		JBrowse link
regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34334113 RGD:155882538 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor NOT|acts_upstream_of_or_within ISO (PMID:14970190) MGI PMID:14970190 NCBI chrNW_004936803:423,558...466,762
Ensembl chrNW_004936803:422,890...466,730 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO PMID:17121910 UniProt PMID:17121910 RGD:2293713 NCBI chrNW_004936504:4,898,947...4,927,195
Ensembl chrNW_004936504:4,898,945...4,928,923 		JBrowse link
G Il20ra interleukin 20 receptor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21844205) Ensembl
MGI		 PMID:21844205 GO_REF:0000107 NCBI chrNW_004936560:4,384,126...4,397,971
Ensembl chrNW_004936560:4,384,512...4,420,567 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17053831) Ensembl
MGI		 PMID:17053831 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,701,012...4,713,421
Ensembl chrNW_004936585:4,700,418...4,714,450 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936748:1,244,962...1,250,093
Ensembl chrNW_004936748:1,245,538...1,250,093 		JBrowse link
G Siglec15 sialic acid binding Ig like lectin 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22451653) Ensembl
TreeGrafter
MGI		 PMID:22451653 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936517:945,345...960,591
Ensembl chrNW_004936517:946,341...953,674 		JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (MGI:5469753|PMID:23341620)
(PMID:23341620)		 UniProt PMID:23341620 MGI:5469753 NCBI chrNW_004936527:6,485,566...6,499,901
Ensembl chrNW_004936527:6,485,511...6,499,924 		JBrowse link
regulation of cell proliferation involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17698607) Ensembl
MGI		 PMID:17698607 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:10,421,821...10,425,927
Ensembl chrNW_004936509:10,423,126...10,424,196 		JBrowse link
retina blood vessel maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28575130) Ensembl
MGI		 PMID:28575130 GO_REF:0000107 NCBI chrNW_004936502:10,080,169...10,105,155
Ensembl chrNW_004936502:10,080,145...10,105,328 		JBrowse link
G Vstm4 V-set and transmembrane domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31698979) Ensembl
MGI		 PMID:31698979 GO_REF:0000107 NCBI chrNW_004936728:1,146,800...1,239,264
Ensembl chrNW_004936728:1,146,680...1,239,773 		JBrowse link
retina homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15365178)
(PMID:15365173)		 Ensembl
MGI		 PMID:15365173 PMID:15365178 GO_REF:0000107 NCBI chrNW_004936677:1,539,502...1,548,343
Ensembl chrNW_004936677:1,538,874...1,548,010 		JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2159503|PMID:8793730)
(PMID:8793730)		 ARUK-UCL
Ensembl		 PMID:8793730 GO_REF:0000107 MGI:2159503 NCBI chrNW_004936595:908,019...914,426
Ensembl chrNW_004936595:907,919...915,053 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15322545) Ensembl
MGI		 PMID:15322545 GO_REF:0000107 NCBI chrNW_004936599:3,059,274...3,076,853
Ensembl chrNW_004936599:3,059,148...3,076,299 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15173597)
(PMID:15322545)		 Ensembl
MGI		 PMID:15173597 PMID:15322545 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:19777273) UniProt PMID:19777273 NCBI chrNW_004936473:7,027,543...7,054,079
Ensembl chrNW_004936473:7,027,495...7,055,028 		JBrowse link
G Cdh3 cadherin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,908,031...18,954,402
Ensembl chrNW_004936475:18,906,493...18,955,072 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934 		JBrowse link
G Poc1b POC1 centriolar protein B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936507:6,375,009...6,457,034
Ensembl chrNW_004936507:6,376,350...6,456,932 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
G Slc28a2 solute carrier family 28 member 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16487924 GO_REF:0000118 RGD:2317453 NCBI chrNW_004936471:7,937,490...7,967,568
Ensembl chrNW_004936471:7,937,490...7,967,568 		JBrowse link
G Slc28a3 solute carrier family 28 member 3 ISO RGD PMID:16487924 RGD:2317453 NCBI chrNW_004937156:124,342...165,937 JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16844785) Ensembl
MGI		 PMID:16844785 GO_REF:0000107 NCBI chrNW_004936500:10,345,154...10,352,873
Ensembl chrNW_004936500:10,345,154...10,352,867 		JBrowse link
G Tulp1 TUB like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,744,707...23,757,002
Ensembl chrNW_004936476:23,744,757...23,756,565 		JBrowse link
G Wdr36 WD repeat domain 36 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20631153) Ensembl
MGI		 PMID:20631153 GO_REF:0000107 NCBI chrNW_004936531:5,513,082...5,546,515
Ensembl chrNW_004936531:5,513,082...5,548,501 		JBrowse link
G Whrn whirlin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:3,668,465...3,748,234
Ensembl chrNW_004936487:3,669,104...3,748,238 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16133
    multicellular organismal process 7430
      multicellular organismal-level homeostasis 880
        tissue homeostasis 279
          amnioserosa maintenance 0
          bone resorption + 82
          cartilage homeostasis 7
          compartment boundary maintenance 0
          epithelial structure maintenance + 32
          homeostasis of number of cells within a tissue + 48
          inhibition of non-skeletal tissue mineralization 5
          maintenance of blood-brain barrier + 22
          maintenance of lens transparency 7
          retina homeostasis + 59
Path 2
Term Annotations click to browse term
  biological_process 16133
    multicellular organismal process 7430
      multicellular organismal-level homeostasis 880
        anatomical structure homeostasis 279
          tissue homeostasis 279
            amnioserosa maintenance 0
            bone resorption + 82
            cartilage homeostasis 7
            compartment boundary maintenance 0
            epithelial structure maintenance + 32
            homeostasis of number of cells within a tissue + 48
            inhibition of non-skeletal tissue mineralization 5
            maintenance of blood-brain barrier + 22
            maintenance of lens transparency 7
            retina homeostasis + 59
paths to the root