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ONTOLOGY REPORT - ANNOTATIONS

Term:tissue homeostasis
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Accession:GO:0001894 term browser browse the term
Definition:A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.
Synonyms:narrow_synonym: tissue maintenance

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tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha acts_upstream_of_or_within ISO (PMID:17210641) MGI PMID:17210641 NCBI chrNW_004624871:4,103,014...4,364,690
Ensembl chrNW_004624871:4,105,067...4,412,325 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:17986521) MGI PMID:17986521 NCBI chrNW_004624746:378,123...576,809
Ensembl chrNW_004624746:461,933...577,050 		JBrowse link
G Ascl3 achaete-scute family bHLH transcription factor 3 involved_in ISO (MGI:5050445|PMID:21377457) UniProt PMID:21377457 MGI:5050445 NCBI chrNW_004624766:1,080,948...1,082,372
Ensembl chrNW_004624766:1,081,694...1,082,236 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624822:4,809,489...4,818,514
Ensembl chrNW_004624822:4,809,405...4,818,515 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) MGI PMID:30735131 NCBI chrNW_004624926:1,189,990...1,197,220
Ensembl chrNW_004624926:1,190,072...1,196,076 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:23839921) MGI PMID:23839921 NCBI chrNW_004624753:6,022,033...6,024,866
Ensembl chrNW_004624753:6,023,069...6,024,833 		JBrowse link
G Cd34 CD34 molecule involved_in ISO (PMID:12939361) UniProt PMID:12939361 NCBI chrNW_004624807:3,936,043...3,958,274
Ensembl chrNW_004624807:3,936,028...3,957,249 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain acts_upstream_of_or_within ISO (PMID:11237662) MGI PMID:11237662 NCBI chrNW_004624754:23,614,486...23,640,489
Ensembl chrNW_004624754:23,614,570...23,639,591 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO (PMID:11237662) MGI PMID:11237662 NCBI chrNW_004624816:4,273,969...4,304,519
Ensembl chrNW_004624816:4,274,219...4,304,513 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:29551664) MGI PMID:29551664 NCBI chrNW_004624899:1,192,078...1,230,528
Ensembl chrNW_004624899:1,192,360...1,230,404 		JBrowse link
G Col9a1 collagen type IX alpha 1 chain acts_upstream_of_or_within ISO (PMID:8197187) MGI PMID:8197187 NCBI chrNW_004624819:9,571,250...9,664,541
Ensembl chrNW_004624819:9,571,265...9,663,820 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18635608) MGI
Ensembl		 PMID:18635608 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO (PMID:19439667) MGI PMID:19439667 NCBI chrNW_004624818:3,868,089...3,882,960
Ensembl chrNW_004624818:3,868,814...3,882,960 		JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within ISO (PMID:20427744) MGI PMID:20427744 NCBI chrNW_004624741:25,138,678...25,197,194
Ensembl chrNW_004624741:25,183,329...25,196,880 		JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within ISO (PMID:18483557) MGI PMID:18483557 NCBI chrNW_004624739:3,405,860...3,410,426
Ensembl chrNW_004624739:3,406,436...3,410,851 		JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:17118629 RGD:1625131 NCBI chrNW_004624805:8,748,848...8,800,259
Ensembl chrNW_004624805:8,765,949...8,802,149 		JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 acts_upstream_of_or_within ISO (PMID:12122007) MGI PMID:12122007 NCBI chrNW_004624812:3,160,684...3,192,323
Ensembl chrNW_004624812:3,160,693...3,193,595 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004624737:27,736,167...27,738,664
Ensembl chrNW_004624737:27,737,735...27,738,568 		JBrowse link
G Nfib nuclear factor I B acts_upstream_of_or_within ISO (PMID:32393888) MGI PMID:32393888 NCBI chrNW_004624736:18,372,418...18,586,390
Ensembl chrNW_004624736:18,377,624...18,586,424 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO (PMID:32393888) MGI PMID:32393888 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004624774:9,432,765...9,469,690
Ensembl chrNW_004624774:9,432,541...9,469,881 		JBrowse link
G Perp p53 apoptosis effector related to PMP22 involved_in ISO (PMID:22515648)
(MGI:6765017|PMID:22515648)		 UniProt PMID:22515648 MGI:6765017 NCBI chrNW_004624753:15,772,104...15,786,238
Ensembl chrNW_004624753:15,772,083...15,786,794 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624816:10,087,866...10,185,004
Ensembl chrNW_004624816:10,164,666...10,184,994 		JBrowse link
G Prlh prolactin releasing hormone acts_upstream_of_or_within ISO (PMID:19033670) MGI PMID:19033670 NCBI chrNW_004624847:2,960,750...2,961,324
Ensembl chrNW_004624847:2,960,750...2,961,324 		JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (PMID:25100735) MGI PMID:25100735 NCBI chrNW_004624748:6,358,588...6,533,217
Ensembl chrNW_004624748:6,358,180...6,533,249 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chrNW_004624735:12,579,963...12,583,128
Ensembl chrNW_004624735:12,579,956...12,581,736 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:4947506|PMID:20056916) UniProt PMID:20056916 MGI:4947506 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within ISO (PMID:18381428) MGI PMID:18381428 NCBI chrNW_004624828:7,444,339...7,466,926
Ensembl chrNW_004624828:7,445,069...7,467,298 		JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 acts_upstream_of_or_within ISO (PMID:24713655) MGI PMID:24713655 NCBI chrNW_004624842:4,666,638...4,675,576
Ensembl chrNW_004624842:4,666,640...4,675,556 		JBrowse link
G Trim32 tripartite motif containing 32 acts_upstream_of_or_within ISO (PMID:19155210) MGI PMID:19155210 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in ISO (MGI:5509071|PMID:23918388) ARUK-UCL PMID:23918388 MGI:5509071 NCBI chrNW_004624730:26,813,716...26,967,615
Ensembl chrNW_004624730:26,813,624...26,967,691 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (MGI:5509071|PMID:23918388) ARUK-UCL PMID:23918388 MGI:5509071 NCBI chrNW_004624878:621,214...776,363 JBrowse link
bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8898228) TreeGrafter
MGI
RGD		 PMID:8898228 PMID:20069278 GO_REF:0000118 RGD:2315871 NCBI chrNW_004624828:3,305,913...3,309,983
Ensembl chrNW_004624828:3,307,635...3,310,547 		JBrowse link
G Adrb2 adrenoceptor beta 2 acts_upstream_of_or_within ISO (PMID:15724149) MGI PMID:15724149 NCBI chrNW_004624774:8,211,723...8,215,962
Ensembl chrNW_004624774:8,211,984...8,213,240 		JBrowse link
G Bbln bublin coiled coil protein acts_upstream_of_or_within ISO (PMID:32569872) MGI PMID:32569872 NCBI chrNW_004624760:6,672,541...6,676,186
Ensembl chrNW_004624760:6,672,541...6,676,216 		JBrowse link
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within ISO (PMID:20121924) MGI PMID:20121924 NCBI chrNW_004624913:2,134,763...2,142,446
Ensembl chrNW_004624913:2,134,780...2,141,780 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15866165) Ensembl
MGI		 PMID:15866165 GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Ctsk cathepsin K acts_upstream_of_or_within ISO (PMID:19834056) RGD
MGI		 PMID:10430032 PMID:19834056 RGD:1601030 NCBI chrNW_004624772:19,013,189...19,026,756
Ensembl chrNW_004624772:19,015,835...19,025,588 		JBrowse link
G Ctss cathepsin S ISO RGD PMID:10470376 RGD:5687153 NCBI chrNW_004624772:18,421,905...18,446,857
Ensembl chrNW_004624772:18,419,736...18,438,786 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:28798354) MGI PMID:28798354 NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:29415886) MGI PMID:29415886 NCBI chrNW_004624763:16,126,582...16,393,476
Ensembl chrNW_004624763:16,126,938...16,392,804 		JBrowse link
G Gpr55 G protein-coupled receptor 55 involved_in ISO (PMID:19805329) UniProt PMID:19805329 NCBI chrNW_004624843:4,263,818...4,311,348
Ensembl chrNW_004624843:4,263,659...4,282,131 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:15866165) MGI PMID:15866165 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Iapp islet amyloid polypeptide involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14970190) Ensembl
MGI		 PMID:14970190 GO_REF:0000107 NCBI chrNW_004624752:17,528,214...17,594,622
Ensembl chrNW_004624752:17,584,225...17,593,693 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10208865) MGI
Ensembl		 PMID:10208865 GO_REF:0000107 NCBI chrNW_004624823:5,959,329...5,965,584
Ensembl chrNW_004624823:5,959,448...5,964,769 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:12490655) MGI PMID:12490655 NCBI chrNW_004624744:12,562,536...12,604,037
Ensembl chrNW_004624744:12,567,661...12,604,074 		JBrowse link
G Lrrk1 leucine rich repeat kinase 1 acts_upstream_of_or_within ISO (PMID:23526378) MGI PMID:23526378 NCBI chrNW_004624768:3,701,187...3,848,943
Ensembl chrNW_004624768:3,712,049...3,848,651 		JBrowse link
G Ncdn neurochondrin acts_upstream_of_or_within ISO (PMID:10231559) MGI PMID:10231559 NCBI chrNW_004624764:18,615,213...18,624,585
Ensembl chrNW_004624764:18,615,910...18,624,687 		JBrowse link
G Nox4 NADPH oxidase 4 acts_upstream_of_or_within ISO (PMID:11098048) MGI PMID:11098048 NCBI chrNW_004624845:669,880...829,471
Ensembl chrNW_004624845:669,902...827,834 		JBrowse link
G Pth1r parathyroid hormone 1 receptor acts_upstream_of_or_within ISO (PMID:9832460) MGI PMID:9832460 NCBI chrNW_004624730:74,371,614...74,392,344
Ensembl chrNW_004624730:74,371,294...74,390,262 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:22,065,448...22,182,604
Ensembl chrNW_004624758:22,124,836...22,182,605 		JBrowse link
G Rab3d RAB3D, member RAS oncogene family involved_in ISO (PMID:21262767) GO_Central PMID:21262767 NCBI chrNW_004624828:3,142,955...3,149,549
Ensembl chrNW_004624828:3,144,914...3,149,359 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO RGD PMID:11514537 RGD:729760 NCBI chrNW_004625042:56,509...112,519
Ensembl chrNW_004625042:56,517...112,612 		JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:10350213 RGD:1599401 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025 		JBrowse link
G Rac2 Rac family small GTPase 2 ISO RGD PMID:10350213 RGD:1599401 NCBI chrNW_004624752:10,589,017...10,620,652
Ensembl chrNW_004624752:10,589,017...10,601,661 		JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within ISO (PMID:25811986) MGI PMID:25811986 NCBI chrNW_004624739:4,210,840...4,274,768
Ensembl chrNW_004624739:4,209,036...4,233,519 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 ISO (MGI:3040548|PMID:14739300)
(PMID:19448635)		 UniProt
MGI		 PMID:14739300 PMID:19448635 MGI:3040548 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18768394), (PMID:22087326)
(PMID:23166162), (PMID:23908015)
(PMID:21305608)		 Ensembl
MGI		 PMID:18768394 PMID:21305608 PMID:22087326 PMID:23166162 PMID:23908015 GO_REF:0000107 NCBI chrNW_004624767:18,809,626...18,820,360
Ensembl chrNW_004624767:18,809,689...18,820,390 		JBrowse link
G Tnfsf11 TNF superfamily member 11 acts_upstream_of_or_within ISO (PMID:12490655) MGI PMID:12490655 NCBI chrNW_004624748:12,527,221...12,555,551
Ensembl chrNW_004624748:12,527,478...12,555,405 		JBrowse link
G Tns3 tensin 3 acts_upstream_of_or_within ISO (PMID:27505886) MGI PMID:27505886 NCBI chrNW_004624740:5,776,883...5,928,434
Ensembl chrNW_004624740:5,824,510...5,930,478 		JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:8,104,934...8,111,049
Ensembl chrNW_004624817:8,104,939...8,111,035 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (MGI:1335941|PMID:10215628)
(PMID:10215628)		 UniProt PMID:10215628 MGI:1335941 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
cartilage homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comp cartilage oligomeric matrix protein involved_in ISO (MGI:6828896|PMID:32747625)
(PMID:32747625)		 UniProt PMID:32747625 MGI:6828896 NCBI chrNW_004624908:1,870,975...1,877,434
Ensembl chrNW_004624908:1,871,002...1,877,369 		JBrowse link
G Cytl1 cytokine like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21652695) Ensembl
MGI		 PMID:21652695 GO_REF:0000107 NCBI chrNW_004624755:21,968,360...21,972,986
Ensembl chrNW_004624755:21,968,570...21,973,397 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chrNW_004624755:26,151,302...26,169,324
Ensembl chrNW_004624755:26,154,186...26,169,365 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:32227389) MGI PMID:32227389 NCBI chrNW_004624730:38,003,437...38,144,312
Ensembl chrNW_004624730:38,003,902...38,144,277 		JBrowse link
G Mtf1 metal regulatory transcription factor 1 acts_upstream_of ISO (MGI:5577232|PMID:24529376) UniProt PMID:24529376 MGI:5577232 NCBI chrNW_004624764:20,510,925...20,557,134
Ensembl chrNW_004624764:20,515,307...20,557,105 		JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO (MGI:5577232|PMID:24529376)
(PMID:24529376)		 UniProt PMID:24529376 MGI:5577232 NCBI chrNW_004624830:5,514,595...5,573,250
Ensembl chrNW_004624830:5,514,780...5,574,894 		JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (PMID:24474754) AgBase PMID:24474754 NCBI chrNW_004624747:10,675,625...10,685,351 JBrowse link
epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics involved_in ISO (MGI:6271776|PMID:30361697) UniProt PMID:30361697 MGI:6271776 NCBI chrNW_004624761:13,065,318...13,367,504 JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within ISO (PMID:15870283) MGI PMID:15870283 NCBI chrNW_004624764:2,562,321...2,605,527
Ensembl chrNW_004624764:2,567,316...2,604,992 		JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule involved_in ISO (PMID:15304526) UniProt PMID:15304526 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:21849460) UniProt PMID:21849460 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319 		JBrowse link
G Ildr1 immunoglobulin like domain containing receptor 1 involved_in ISO (MGI:5507911|PMID:23239027)
(PMID:23239027)		 UniProt PMID:23239027 MGI:5507911 NCBI chrNW_004624912:269,657...300,537
Ensembl chrNW_004624912:267,185...300,550 		JBrowse link
G Ldb1 LIM domain binding 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17991461) Ensembl
MGI		 PMID:17991461 GO_REF:0000107 NCBI chrNW_004624831:1,573,058...1,584,861
Ensembl chrNW_004624831:1,571,942...1,584,775 		JBrowse link
G Ldb2 LIM domain binding 2 acts_upstream_of_or_within ISO (PMID:17991461) MGI PMID:17991461 NCBI chrNW_004624755:14,962,538...15,358,771
Ensembl chrNW_004624755:14,962,317...15,359,814 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISO (MGI:5507911|PMID:23239027) UniProt PMID:23239027 MGI:5507911 NCBI chrNW_004624794:8,271,642...8,286,816
Ensembl chrNW_004624794:8,271,159...8,285,967 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO (PMID:21045211)
(PMID:19776033)
(PMID:23454480)		 MGI PMID:19776033 PMID:21045211 PMID:23454480 NCBI chrNW_004624871:50,688...63,772
Ensembl chrNW_004624871:51,122...63,742 		JBrowse link
G Piwil4 piwi like RNA-mediated gene silencing 4 involved_in ISO (PMID:28025795) UniProt PMID:28025795 NCBI chrNW_004624735:39,220,242...39,285,794 JBrowse link
G Pkp3 plakophilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:22,015,928...22,024,313
Ensembl chrNW_004624766:22,015,928...22,022,840 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:21849460) UniProt PMID:21849460 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:20047077) MGI PMID:20047077 NCBI chrNW_004624754:16,371,995...16,381,287 JBrowse link
homeostasis of number of cells within a tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 acts_upstream_of_or_within ISO (PMID:18723693) MGI PMID:18723693 NCBI chrNW_004624755:24,854,742...24,927,912
Ensembl chrNW_004624755:24,854,742...24,928,006 		JBrowse link
G Akt3 AKT serine/threonine kinase 3 acts_upstream_of_or_within ISO (PMID:15713641) MGI PMID:15713641 NCBI chrNW_004624771:15,639,018...15,896,590
Ensembl chrNW_004624771:15,648,638...15,896,590 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:15342910)
(PMID:11413548)		 MGI PMID:11413548 PMID:15342910 NCBI chrNW_004624832:5,050,222...5,068,565
Ensembl chrNW_004624832:5,050,222...5,055,506 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:16427619)
(PMID:9241272)		 MGI PMID:9241272 PMID:16427619 NCBI chrNW_004624792:8,854,345...9,032,727
Ensembl chrNW_004624792:8,859,522...9,031,344 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 acts_upstream_of_or_within ISO (PMID:29960053) MGI PMID:29960053 NCBI chrNW_004624760:15,902,890...16,071,513
Ensembl chrNW_004624760:15,902,858...16,075,104 		JBrowse link
G Cd7 CD7 molecule acts_upstream_of_or_within ISO (PMID:9637484) MGI PMID:9637484 NCBI chrNW_004624801:11,108,032...11,112,345 JBrowse link
G Col14a1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO (PMID:22906538) MGI PMID:22906538 NCBI chrNW_004624763:17,982,646...18,172,742
Ensembl chrNW_004624763:17,982,646...18,172,904 		JBrowse link
G Coro1a coronin 1A acts_upstream_of_or_within ISO (PMID:18836449) MGI PMID:18836449 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Csf1 colony stimulating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9215625) Ensembl
MGI		 PMID:9215625 GO_REF:0000107 NCBI chrNW_004624772:5,663,374...5,705,965
Ensembl chrNW_004624772:5,663,070...5,707,753 		JBrowse link
G F2r coagulation factor II thrombin receptor acts_upstream_of_or_within ISO (PMID:18305483) MGI PMID:18305483 NCBI chrNW_004624869:1,181,288...1,200,751
Ensembl chrNW_004624869:1,181,354...1,200,664 		JBrowse link
G Fh fumarate hydratase acts_upstream_of_or_within ISO (PMID:17418408) MGI PMID:17418408 NCBI chrNW_004624771:11,861,537...11,886,154
Ensembl chrNW_004624771:11,856,884...11,887,066 		JBrowse link
G Flt3 fms related receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:20457904)
(PMID:22674806)		 MGI PMID:20457904 PMID:22674806 NCBI chrNW_004624776:10,407,083...10,516,350
Ensembl chrNW_004624776:10,435,850...10,517,066 		JBrowse link
G Flt3lg fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:21048959) MGI PMID:21048959 NCBI chrNW_004624832:4,733,820...4,739,214 JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:24464219)
(PMID:33655757)		 MGI PMID:24464219 PMID:33655757 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO (PMID:14504093) MGI PMID:14504093 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14504093)
(PMID:15811962)		 Ensembl
MGI		 PMID:14504093 PMID:15811962 GO_REF:0000107 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within ISO (PMID:19744960) MGI PMID:19744960 NCBI chrNW_004624843:5,391,725...5,538,980
Ensembl chrNW_004624843:5,420,352...5,537,217 		JBrowse link
G Il20rb interleukin 20 receptor subunit beta acts_upstream_of_or_within ISO (PMID:19124723) MGI PMID:19124723 NCBI chrNW_004624730:13,371,898...13,408,927
Ensembl chrNW_004624730:13,378,478...13,409,676 		JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within ISO (PMID:9252127) MGI PMID:9252127 NCBI chrNW_004624744:12,562,536...12,604,037
Ensembl chrNW_004624744:12,567,661...12,604,074 		JBrowse link
G Ildr2 immunoglobulin like domain containing receptor 2 acts_upstream_of_or_within ISO (PMID:18654634) MGI PMID:18654634 NCBI chrNW_004624826:4,991,792...5,051,574
Ensembl chrNW_004624826:4,993,274...5,037,627 		JBrowse link
G Klhl10 kelch like family member 10 acts_upstream_of_or_within ISO (PMID:15136734) MGI PMID:15136734 NCBI chrNW_004624795:1,922,605...1,928,175
Ensembl chrNW_004624795:1,921,414...1,928,161 		JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO (PMID:22674806) MGI PMID:22674806 NCBI chrNW_004624784:13,824,507...13,912,672
Ensembl chrNW_004624784:13,824,541...13,908,077 		JBrowse link
G Kras KRAS proto-oncogene, GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24675817) Ensembl
MGI		 PMID:24675817 GO_REF:0000107 NCBI chrNW_004624752:13,809,741...13,847,020
Ensembl chrNW_004624752:13,809,775...13,844,166 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO (PMID:14644759) MGI PMID:14644759 NCBI chrNW_004624737:49,471...82,981
Ensembl chrNW_004624737:49,371...83,514 		JBrowse link
G LOC101715424 tubulin alpha-1B chain-like involved_in ISO (PMID:21875651) MGI PMID:21875651 NCBI chrNW_004624816:3,001,252...3,006,166 JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 acts_upstream_of_or_within ISO (PMID:35727972) MGI PMID:35727972 NCBI chrNW_004624774:11,607,603...11,623,582
Ensembl chrNW_004624774:11,607,504...11,623,544 		JBrowse link
G Nfix nuclear factor I X involved_in ISO (PMID:27965439)
(PMID:25331604)		 MGI PMID:25331604 PMID:27965439 NCBI chrNW_004624901:551,277...645,435
Ensembl chrNW_004624901:550,931...646,417 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:26019294) MGI PMID:26019294 NCBI chrNW_004624789:15,612,311...15,623,878
Ensembl chrNW_004624789:15,612,335...15,624,152 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (MGI:6158784|PMID:27107132) BHF-UCL PMID:27107132 MGI:6158784 NCBI chrNW_004624800:5,600,215...5,619,020
Ensembl chrNW_004624800:5,600,212...5,619,004 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:27107132)
(MGI:6158784|PMID:27107132)		 BHF-UCL PMID:27107132 MGI:6158784 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:16969386) MGI PMID:16969386 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622394) Ensembl
MGI		 PMID:18622394 GO_REF:0000107 NCBI chrNW_004624744:21,092,091...21,121,313
Ensembl chrNW_004624744:21,104,798...21,120,591 		JBrowse link
G Pth parathyroid hormone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21048959) Ensembl
MGI		 PMID:21048959 GO_REF:0000107 NCBI chrNW_004624766:5,489,857...5,492,777
Ensembl chrNW_004624766:5,489,800...5,492,871 		JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24675817) MGI
Ensembl		 PMID:24675817 GO_REF:0000107 NCBI chrNW_004624747:19,721,581...19,813,639
Ensembl chrNW_004624747:19,721,468...19,813,670 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO (PMID:23258346) MGI PMID:23258346 NCBI chrNW_004624801:10,862,490...10,864,856
Ensembl chrNW_004624801:10,862,502...10,864,879 		JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO (PMID:15965476) MGI PMID:15965476 NCBI chrNW_004624786:4,547,889...4,604,605
Ensembl chrNW_004624786:4,547,962...4,604,290 		JBrowse link
G Sash3 SAM and SH3 domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16227612) Ensembl
MGI		 PMID:16227612 GO_REF:0000107 NCBI chrNW_004624797:9,001,846...9,017,441
Ensembl chrNW_004624797:9,001,795...9,018,027 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (PMID:23680462) MGI PMID:23680462 NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:24218621) MGI PMID:24218621 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within ISO (PMID:18283110) MGI PMID:18283110 NCBI chrNW_004624780:13,198,569...13,297,189
Ensembl chrNW_004624780:13,198,592...13,298,703 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:22886301) MGI PMID:22886301 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in
acts_upstream_of_or_within		 ISO (PMID:24349357)
(PMID:8815872)		 MGI PMID:8815872 PMID:24349357 NCBI chrNW_004624762:9,457,283...9,570,311
Ensembl chrNW_004624762:9,457,705...9,563,779 		JBrowse link
homeostasis of number of retina cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:27715390) MGI PMID:27715390 NCBI chrNW_004624778:9,490,744...9,614,289
Ensembl chrNW_004624778:9,491,258...9,614,299 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within ISO (PMID:23580486) MGI PMID:23580486 NCBI chrNW_004624772:5,317,702...5,326,841
Ensembl chrNW_004624772:5,318,113...5,326,841 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chrNW_004624731:5,350,912...5,359,286 JBrowse link
inhibition of non-skeletal tissue mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc6 ATP binding cassette subfamily C member 6 involved_in ISO (PMID:24732453)
(PMID:28652107)		 MGI PMID:24732453 PMID:28652107 NCBI chrNW_004624782:590,174...640,576
Ensembl chrNW_004624782:594,511...640,180 		JBrowse link
G Alpl alkaline phosphatase, biomineralization associated involved_in ISO (PMID:21490328) MGI PMID:21490328 NCBI chrNW_004624764:6,393,741...6,447,739
Ensembl chrNW_004624764:6,393,765...6,447,829 		JBrowse link
G Ankh ANKH inorganic pyrophosphate transport regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624751:11,716,369...11,847,726
Ensembl chrNW_004624751:11,716,369...11,847,758 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:23798568), (PMID:26624227), (PMID:26763447), (PMID:27959908), (PMID:28402956), (PMID:28652107)
(PMID:21490328)
(PMID:24732453)
(PMID:15625282)
(PMID:25644539)		 MGI PMID:15625282 PMID:21490328 PMID:23798568 PMID:24732453 PMID:25644539 More... NCBI chrNW_004624753:5,918,005...5,983,480
Ensembl chrNW_004624753:5,917,689...5,982,308 		JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624799:8,766,608...8,845,296
Ensembl chrNW_004624799:8,765,711...8,845,778 		JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10ra interleukin 10 receptor subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:13,386,793...13,399,871
Ensembl chrNW_004624784:13,386,965...13,403,014 		JBrowse link
G Il17a interleukin 17A involved_in ISO (MGI:5788042|PMID:26431948)
(PMID:26431948)		 UniProt PMID:26431948 MGI:5788042 NCBI chrNW_004624855:3,911,349...3,914,214
Ensembl chrNW_004624855:3,911,349...3,913,136 		JBrowse link
G Inava innate immunity activator involved_in ISO (MGI:6119883|PMID:29420262)
(PMID:29420262)		 UniProt PMID:29420262 MGI:6119883 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:17681175) MGI PMID:17681175 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Znf830 zinc finger protein 830 acts_upstream_of_or_within ISO (PMID:23213458) MGI PMID:23213458 NCBI chrNW_004624875:2,853,426...2,854,925
Ensembl chrNW_004624875:2,853,472...2,854,572 		JBrowse link
maintenance of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb2 bradykinin receptor B2 ISO RGD PMID:20080302 RGD:4891047 NCBI chrNW_004624734:8,513,601...8,538,838
Ensembl chrNW_004624734:8,513,814...8,539,036 		JBrowse link
G Cd2ap CD2 associated protein acts_upstream_of_or_within ISO (PMID:26358779) MGI PMID:26358779 NCBI chrNW_004624754:13,420,594...13,511,672
Ensembl chrNW_004624754:13,420,603...13,511,523 		JBrowse link
G Cldn5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:164,113...166,502
Ensembl chrNW_004624747:164,761...165,417 		JBrowse link
G Mbp myelin basic protein involved_in ISO (PMID:22524708) CAFA PMID:22524708 NCBI chrNW_004624806:3,465,881...3,587,428
Ensembl chrNW_004624806:3,489,681...3,588,335 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (MGI:6196220|PMID:30074985)
(PMID:30074985)		 ARUK-UCL PMID:30074985 MGI:6196220 NCBI chrNW_004624764:22,422,520...22,435,332
Ensembl chrNW_004624764:22,422,423...22,435,416 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:21408219) MGI PMID:21408219 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197 		JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 ISO RGD PMID:17704356 RGD:2325928 NCBI chrNW_004624760:12,917,244...12,937,858
Ensembl chrNW_004624760:12,915,206...12,937,824 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:17704356 RGD:2325928 NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728 		JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (PMID:28577991)
(MGI:6392927|PMID:28577991)		 ARUK-UCL PMID:28577991 MGI:6392927 NCBI chrNW_004624774:13,236,306...13,335,412 JBrowse link
G Slc1a1 solute carrier family 1 member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6393184|PMID:25350110) ARUK-UCL
Ensembl		 PMID:25350110 GO_REF:0000107 MGI:6393184 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485 		JBrowse link
G Tspan12 tetraspanin 12 acts_upstream_of_or_within ISO (PMID:30478038) MGI PMID:30478038 NCBI chrNW_004624783:15,226,927...15,285,931
Ensembl chrNW_004624783:15,226,852...15,285,931 		JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27782176)
(MGI:6221361|PMID:27782176)		 ARUK-UCL
Ensembl		 PMID:27782176 GO_REF:0000107 MGI:6221361 NCBI chrNW_004624909:1,886,372...2,107,582
Ensembl chrNW_004624909:1,891,486...2,081,735 		JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin dynamics involved_in ISO (MGI:6271776|PMID:30361697) UniProt PMID:30361697 MGI:6271776 NCBI chrNW_004624761:13,065,318...13,367,504 JBrowse link
G Htr4 5-hydroxytryptamine receptor 4 involved_in ISO (PMID:33299969) UniProt PMID:33299969 NCBI chrNW_004624774:7,851,451...8,027,524
Ensembl chrNW_004624774:7,887,577...8,027,500 		JBrowse link
G LOC101710760 trefoil factor 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:28,129,763...28,132,918
Ensembl chrNW_004624745:28,130,071...28,132,385 		JBrowse link
G Muc13 mucin 13, cell surface associated involved_in ISO (PMID:17058067) UniProt PMID:17058067 NCBI chrNW_004624731:943,067...955,989 JBrowse link
G Muc2 mucin 2, oligomeric mucus/gel-forming involved_in ISO (MGI:6471838|PMID:33093110), (PMID:35337837)
(PMID:17058067)		 UniProt PMID:17058067 PMID:33093110 PMID:35337837 MGI:6471838 NCBI chrNW_004624766:21,493,125...21,522,535 JBrowse link
G Muc4 mucin 4, cell surface associated involved_in ISO (PMID:17058067) UniProt PMID:17058067 NCBI chrNW_004624730:61,153,753...61,176,859 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:17058067) UniProt PMID:17058067 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pbld phenazine biosynthesis like protein domain containing involved_in ISO (PMID:17929853) UniProt PMID:17929853 NCBI chrNW_004624754:2,525,486...2,697,705
Ensembl chrNW_004624754:2,640,884...2,663,990 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:10944490) BHF-UCL PMID:10944490 NCBI chrNW_004624737:4,795,054...4,800,830
Ensembl chrNW_004624737:4,791,628...4,800,989 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO (PMID:17929853) UniProt PMID:17929853 NCBI chrNW_004624752:22,143,774...22,170,164
Ensembl chrNW_004624752:22,143,774...22,170,182 		JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (PMID:21991385) MGI PMID:21991385 NCBI chrNW_004624803:8,421,863...8,457,044
Ensembl chrNW_004624803:8,422,036...8,457,102 		JBrowse link
maintenance of lens transparency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:15623782 UniProt PMID:15623782 RGD:2306321 NCBI chrNW_004624811:505,297...563,795
Ensembl chrNW_004624811:505,101...563,855 		JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 involved_in ISO (MGI:5648704|PMID:25757569) UniProt PMID:25757569 MGI:5648704 NCBI chrNW_004624761:25,924,747...26,265,763
Ensembl chrNW_004624761:25,924,714...26,262,386 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17701905) UniProt PMID:17701905 NCBI chrNW_004624842:5,454,616...5,505,454
Ensembl chrNW_004624842:5,450,900...5,505,418 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:5314489|PMID:22171010) UniProt PMID:22171010 MGI:5314489 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343 		JBrowse link
G Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) involved_in ISO (PMID:12424189) UniProt PMID:12424189 NCBI chrNW_004624756:15,231,222...15,342,469
Ensembl chrNW_004624756:15,257,623...15,313,668 		JBrowse link
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming acts_upstream_of_or_within ISO (PMID:23272068) MGI PMID:23272068 NCBI chrNW_004624766:21,439,023...21,461,108 JBrowse link
G Stk39 serine/threonine kinase 39 involved_in ISO (MGI:5766617|PMID:25515571) ParkinsonsUK-UCL PMID:25515571 MGI:5766617 NCBI chrNW_004624787:5,682,023...5,966,770
Ensembl chrNW_004624787:5,681,928...5,966,699 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B involved_in ISO (MGI:6455609|PMID:32915983) UniProt PMID:32915983 MGI:6455609 NCBI chrNW_004624763:6,101,943...6,866,457
Ensembl chrNW_004624763:6,102,674...6,864,817 		JBrowse link
negative regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 ISO RGD PMID:18854840 RGD:2325137 NCBI chrNW_004624766:9,018,616...9,092,365
Ensembl chrNW_004624766:9,018,721...9,092,287 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:12973019 PMID:12973022 RGD:401851924 RGD:401851925 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (PMID:24854121) ARUK-UCL PMID:24854121 NCBI chrNW_004624736:21,554,950...21,715,522
Ensembl chrNW_004624736:21,554,969...21,716,877 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:19148554) ARUK-UCL PMID:19148554 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
negative regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin related polypeptide alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:6,764,388...6,771,396
Ensembl chrNW_004624766:6,766,185...6,768,173 		JBrowse link
G Cartpt CART prepropeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624905:751,032...753,012
Ensembl chrNW_004624905:751,223...752,845 		JBrowse link
G Cd38 CD38 molecule ISO RGD PMID:10477767 RGD:2307268 NCBI chrNW_004624755:16,035,412...16,093,610
Ensembl chrNW_004624755:16,034,771...16,093,866 		JBrowse link
G Cldn18 claudin 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22437732) Ensembl
MGI		 PMID:22437732 GO_REF:0000107 NCBI chrNW_004624730:14,500,379...14,522,047
Ensembl chrNW_004624730:14,489,585...14,522,042 		JBrowse link
G Csk C-terminal Src kinase ISO RGD PMID:10411542 RGD:5134371 NCBI chrNW_004624894:12,621...29,400
Ensembl chrNW_004624894:24,203...29,668 		JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:11089565), (PMID:17332067) MGI PMID:11089565 PMID:17332067 NCBI chrNW_004624738:30,170,514...30,369,250
Ensembl chrNW_004624738:30,176,817...30,369,166 		JBrowse link
G Gpr137 G protein-coupled receptor 137 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:22,021,596...22,025,362
Ensembl chrNW_004624767:22,019,257...22,025,686 		JBrowse link
G Gpr137b G protein-coupled receptor 137B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:14,333,389...14,380,869
Ensembl chrNW_004624775:14,338,028...14,380,845 		JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within ISO (PMID:24561287) MGI PMID:24561287 NCBI chrNW_004624794:8,257,760...8,259,243
Ensembl chrNW_004624794:8,257,760...8,259,264 		JBrowse link
G Iapp islet amyloid polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14970190) Ensembl
MGI		 PMID:14970190 GO_REF:0000107 NCBI chrNW_004624752:17,528,214...17,594,622
Ensembl chrNW_004624752:17,584,225...17,593,693 		JBrowse link
G Il6 interleukin 6 involved_in ISO (MGI:5795829|PMID:11159963) BHF-UCL PMID:11159963 MGI:5795829 NCBI chrNW_004624739:7,957,709...7,963,414
Ensembl chrNW_004624739:7,957,674...7,962,318 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12161749) TreeGrafter
MGI		 PMID:12161749 GO_REF:0000118 NCBI chrNW_004624843:5,685,409...5,774,459
Ensembl chrNW_004624843:5,685,502...5,773,469 		JBrowse link
G LOC101702005 aromatase ISO RGD PMID:8694895 RGD:7257714 NCBI chrNW_004624731:9,053,644...9,100,212
Ensembl chrNW_004624731:9,053,803...9,100,212 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:12677010) MGI PMID:12677010 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO (MGI:5543589|PMID:22416756) ARUK-UCL PMID:22416756 MGI:5543589 NCBI chrNW_004624747:11,828,292...11,834,855 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11b ISO RGD PMID:11839361 PMID:16912914 RGD:1624170 RGD:730196 NCBI chrNW_004624763:17,139,109...17,166,398
Ensembl chrNW_004624763:17,138,847...17,166,453 		JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23149425) TreeGrafter
MGI		 PMID:23149425 GO_REF:0000118 NCBI chrNW_004624880:2,269,247...2,427,531
Ensembl chrNW_004624880:2,270,679...2,427,298 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:15312247 RGD:1580559 NCBI chrNW_004624754:15,929,414...15,943,637 JBrowse link
photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO (PMID:11431429) MGI PMID:11431429 NCBI chrNW_004624742:3,536,591...3,661,706
Ensembl chrNW_004624742:3,536,591...3,661,468 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:14740321) HGNC-UCL PMID:14740321 NCBI chrNW_004624743:9,849,070...10,292,392 JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within ISO (PMID:7525597)
(MGI:69165|PMID:7525597)		 ARUK-UCL PMID:7525597 MGI:69165 NCBI chrNW_004624786:10,254,979...10,261,508
Ensembl chrNW_004624786:10,234,492...10,262,367 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO (PMID:17980398) BHF-UCL PMID:17980398 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in ISO (PMID:17980398) BHF-UCL PMID:17980398 NCBI chrNW_004624750:21,759,412...21,763,608
Ensembl chrNW_004624750:21,759,495...21,766,679 		JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22869374), (PMID:22958920) TreeGrafter
MGI		 PMID:22869374 PMID:22958920 GO_REF:0000118 NCBI chrNW_004624777:3,168,791...3,179,650
Ensembl chrNW_004624777:3,177,350...3,179,476 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15539463) Ensembl
MGI		 PMID:15539463 GO_REF:0000107 NCBI chrNW_004624757:55,861...88,703
Ensembl chrNW_004624757:55,811...88,562 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:23943788)
(PMID:16794820), (PMID:21444805)
(PMID:17591906), (PMID:20398886), (PMID:23943788)		 MGI PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755 		JBrowse link
G Bsg basigin (Ok blood group) involved_in ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)		 UniProt PMID:25957687 MGI:6436439 NCBI chrNW_004624828:7,913,297...7,920,891
Ensembl chrNW_004624828:7,913,099...7,920,804 		JBrowse link
G Cdh23 cadherin related 23 involved_in ISO (PMID:16679490) HGNC-UCL PMID:16679490 NCBI chrNW_004624754:5,356,006...5,725,774
Ensembl chrNW_004624754:5,393,733...5,724,876 		JBrowse link
G Cdhr1 cadherin related family member 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:11738025)
(PMID:20805371)		 MGI
UniProt		 PMID:11738025 PMID:20805371 NCBI chrNW_004624841:2,820,543...2,838,998
Ensembl chrNW_004624841:2,820,546...2,839,005 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:23943788) MGI PMID:23943788 NCBI chrNW_004624837:7,054,659...7,138,840
Ensembl chrNW_004624837:7,054,813...7,138,097 		JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in ISO (PMID:23023331)
(MGI:5487486|PMID:23023331)		 UniProt PMID:23023331 MGI:5487486 NCBI chrNW_004624894:2,688,784...2,704,742
Ensembl chrNW_004624894:2,688,814...2,704,747 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11182090) Ensembl
MGI		 PMID:11182090 GO_REF:0000107 NCBI chrNW_004624769:1,156,522...1,246,531
Ensembl chrNW_004624769:1,156,460...1,232,612 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15565184), (PMID:9151333) MGI
Ensembl		 PMID:9151333 PMID:15565184 GO_REF:0000107 NCBI chrNW_004624861:960,643...977,292
Ensembl chrNW_004624861:968,219...977,467 		JBrowse link
G Clrn1 clarin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:28,373,111...28,412,282
Ensembl chrNW_004624730:28,373,120...28,412,282 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO (PMID:15634774) MGI PMID:15634774 NCBI chrNW_004624746:28,198,324...28,268,280 JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (PMID:17234588), (PMID:25147295) MGI PMID:17234588 PMID:25147295 NCBI chrNW_004624798:2,861,481...2,999,387
Ensembl chrNW_004624798:2,861,520...2,999,697 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5461109|PMID:23001562)
(PMID:23001562)		 UniProt PMID:23001562 MGI:5461109 NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287 		JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within ISO (PMID:15870283) MGI PMID:15870283 NCBI chrNW_004624764:2,562,321...2,605,527
Ensembl chrNW_004624764:2,567,316...2,604,992 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:37691820) TreeGrafter
MGI		 PMID:37691820 GO_REF:0000118 NCBI chrNW_004624772:6,901,212...6,923,006 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17145777) Ensembl
MGI		 PMID:17145777 GO_REF:0000107 NCBI chrNW_004624928:458,651...532,201
Ensembl chrNW_004624928:463,279...530,115 		JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO (MGI:4457950|PMID:20534447) UniProt PMID:20534447 MGI:4457950 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045 		JBrowse link
G Iqcb1 IQ motif containing B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624912:56,209...112,766
Ensembl chrNW_004624912:56,946...113,438 		JBrowse link
G Lca5 lebercilin LCA5 acts_upstream_of_or_within ISO (PMID:21606596) MGI PMID:21606596 NCBI chrNW_004624819:6,143,586...6,199,436
Ensembl chrNW_004624819:6,141,740...6,199,624 		JBrowse link
G Mak male germ cell associated kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21148103) MGI
Ensembl		 PMID:21148103 GO_REF:0000107 NCBI chrNW_004624756:15,119,788...15,167,815
Ensembl chrNW_004624756:15,119,788...15,168,680 		JBrowse link
G Map1a microtubule associated protein 1A acts_upstream_of_or_within ISO (PMID:22323461) MGI PMID:22323461 NCBI chrNW_004624804:10,611,657...10,632,199
Ensembl chrNW_004624804:10,611,672...10,630,881 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO (PMID:15772095)
(PMID:16170314)		 MGI PMID:15772095 PMID:16170314 NCBI chrNW_004624741:11,323,935...11,447,669
Ensembl chrNW_004624741:11,425,368...11,435,706 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:12872122) HGNC-UCL PMID:12872122 NCBI chrNW_004624730:8,824,370...8,874,614
Ensembl chrNW_004624730:8,816,643...8,874,649 		JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO (PMID:21078623) MGI PMID:21078623 NCBI chrNW_004624818:5,325,946...5,432,290
Ensembl chrNW_004624818:5,327,038...5,432,901 		JBrowse link
G Nxnl1 nucleoredoxin like 1 involved_in ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)		 UniProt PMID:25957687 MGI:6436439 NCBI chrNW_004624908:549,989...554,902
Ensembl chrNW_004624908:551,921...554,427 		JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) HGNC-UCL PMID:11398101 NCBI chrNW_004624791:9,042,311...9,992,341
Ensembl chrNW_004624791:9,195,902...9,990,131 		JBrowse link
G Pde6a phosphodiesterase 6A acts_upstream_of_or_within ISO (PMID:22183357) MGI PMID:22183357 NCBI chrNW_004624774:9,179,272...9,291,484
Ensembl chrNW_004624774:9,182,865...9,248,537 		JBrowse link
G Prom1 prominin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624755:15,765,162...15,886,023
Ensembl chrNW_004624755:15,771,286...15,886,348 		JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22183357) Ensembl
MGI		 PMID:22183357 GO_REF:0000107 NCBI chrNW_004624872:523,892...528,278
Ensembl chrNW_004624872:523,912...527,615 		JBrowse link
G Rp1 RP1 axonemal microtubule associated involved_in ISO (MGI:3604930|PMID:16126734)
(PMID:16126734)		 UniProt PMID:16126734 MGI:3604930 NCBI chrNW_004624735:1,129,333...1,179,387
Ensembl chrNW_004624735:1,093,929...1,179,265 		JBrowse link
G Rp1l1 RP1 like 1 involved_in ISO (MGI:4353917|PMID:19657028)
(PMID:23281133)		 UniProt
BHF-UCL		 PMID:19657028 PMID:23281133 MGI:4353917 NCBI chrNW_004624758:24,480,805...24,516,524 JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:13,869,210...13,943,864
Ensembl chrNW_004624734:13,879,522...13,943,703 		JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within ISO (PMID:10629044) MGI PMID:10629044 NCBI chrNW_004624766:206,082...293,922
Ensembl chrNW_004624766:268,778...293,356 		JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:4397555|PMID:19218615)
(PMID:10607826)
(PMID:10549638), (PMID:17525220)
(PMID:22183357)		 UniProt
MGI		 PMID:10549638 PMID:10607826 PMID:17525220 PMID:19218615 PMID:22183357 MGI:4397555 NCBI chrNW_004624754:21,961,513...21,971,362 JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO (PMID:11398101) HGNC-UCL PMID:11398101 NCBI chrNW_004624766:9,097,466...9,153,602
Ensembl chrNW_004624766:9,105,990...9,153,663 		JBrowse link
G Ush1g USH1 protein network component sans involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:4,747,260...4,761,223
Ensembl chrNW_004624801:4,755,688...4,761,180 		JBrowse link
G Ush2a usherin acts_upstream_of_or_within
involved_in		 ISO (PMID:17360538)
(PMID:10090909)		 MGI
HGNC-UCL		 PMID:10090909 PMID:17360538 NCBI chrNW_004624835:48,213...758,640
Ensembl chrNW_004624835:49,877...758,640 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in ISO (MGI:6383248|PMID:30573563)
(PMID:30573563)		 UniProt PMID:30573563 MGI:6383248 NCBI chrNW_004624810:5,508,912...5,574,233
Ensembl chrNW_004624810:5,508,882...5,574,395 		JBrowse link
positive regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in ISO (PMID:19148554) ARUK-UCL PMID:19148554 NCBI chrNW_004624763:22,645,807...22,818,592
Ensembl chrNW_004624763:22,646,231...22,718,294 		JBrowse link
G Ocln occludin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624905:333,853...388,990
Ensembl chrNW_004624905:333,864...388,880 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:24854121) ARUK-UCL PMID:24854121 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302 		JBrowse link
G Tjp2 tight junction protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:3,833,402...4,009,385
Ensembl chrNW_004624736:3,834,548...3,878,828 		JBrowse link
G Tjp3 tight junction protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,374,678...6,398,483
Ensembl chrNW_004624828:6,383,767...6,398,359 		JBrowse link
positive regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:11341326)
(MGI:5009349|PMID:20683884)
(MGI:5009189|PMID:11341326)		 BHF-UCL PMID:11341326 PMID:20683884 MGI:5009189 MGI:5009349 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Ahsg alpha 2-HS glycoprotein ISO RGD PMID:10500999 RGD:1625797 NCBI chrNW_004624730:70,149,461...70,156,058
Ensembl chrNW_004624730:70,149,850...70,156,039 		JBrowse link
G Ca2 carbonic anhydrase 2 ISO RGD PMID:8674544 RGD:1600722 NCBI chrNW_004624744:6,168,030...6,183,407
Ensembl chrNW_004624744:6,167,606...6,183,538 		JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:20,588,635...20,602,124
Ensembl chrNW_004624763:20,589,668...20,601,641 		JBrowse link
G Def8 differentially expressed in FDCP 8 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:99,543...119,535 JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:21308776) MGI PMID:21308776 NCBI chrNW_004624734:3,363,084...3,372,790
Ensembl chrNW_004624734:3,363,001...3,372,694 		JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:2981075 RGD:10395245 NCBI chrNW_004624740:584,133...713,205
Ensembl chrNW_004624740:589,606...713,271 		JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa involved_in ISO (MGI:5641770|PMID:25824719)
(PMID:25824719)		 UniProt PMID:25824719 MGI:5641770 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Fshb follicle stimulating hormone subunit beta acts_upstream_of_or_within ISO (PMID:16630814) MGI PMID:16630814 NCBI chrNW_004624766:19,328,730...19,332,385
Ensembl chrNW_004624766:19,329,371...19,331,267 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19834056) MGI PMID:19834056 NCBI chrNW_004624755:26,151,302...26,169,324
Ensembl chrNW_004624755:26,154,186...26,169,365 		JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:8603604 RGD:5024929 NCBI chrNW_004624849:1,895,378...1,952,755
Ensembl chrNW_004624849:1,895,914...1,952,665 		JBrowse link
G LOC101719398 serotransferrin involved_in ISO (PMID:19252502)
(MGI:3838421|PMID:19252502)		 DFLAT PMID:19252502 MGI:3838421 NCBI chrNW_004624730:10,078,165...10,109,349 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18505367) MGI PMID:18505367 NCBI chrNW_004624752:25,605,444...25,756,573
Ensembl chrNW_004624752:25,605,302...25,751,893 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO (PMID:15878314) MGI PMID:15878314 NCBI chrNW_004624767:20,845,949...20,861,169
Ensembl chrNW_004624767:20,845,949...20,860,673 		JBrowse link
G Mc4r melanocortin 4 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624792:5,865,902...5,867,498
Ensembl chrNW_004624792:5,866,119...5,867,120 		JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in ISO (MGI:5806241|PMID:27777970)
(PMID:27777970)		 UniProt PMID:27777970 MGI:5806241 NCBI chrNW_004624795:37,059...86,568
Ensembl chrNW_004624795:37,059...89,135 		JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in ISO (MGI:3838421|PMID:19252502) DFLAT PMID:19252502 MGI:3838421 NCBI chrNW_004624774:9,056,138...9,178,645
Ensembl chrNW_004624774:9,056,322...9,174,388 		JBrowse link
G Prkca protein kinase C alpha involved_in ISO (MGI:5284791|PMID:16014375) BHF-UCL PMID:16014375 MGI:5284791 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172 		JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:11792579 RGD:729815 NCBI chrNW_004624759:14,243,887...14,259,090
Ensembl chrNW_004624759:14,244,899...14,258,445 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in IEA
ISO		 TreeGrafter
RGD		 PMID:11792563 GO_REF:0000118 RGD:1581129 NCBI chrNW_004624872:4,505,796...4,513,247
Ensembl chrNW_004624872:4,505,522...4,513,742 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:8514886 RGD:150524326 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Tfrc transferrin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:61,282,650...61,313,487
Ensembl chrNW_004624730:61,285,334...61,313,550 		JBrowse link
G Tmem64 transmembrane protein 64 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23395171) TreeGrafter
MGI		 PMID:23395171 GO_REF:0000118 NCBI chrNW_004624744:1,313,662...1,348,438
Ensembl chrNW_004624744:1,313,482...1,337,753 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11805147) TreeGrafter
MGI		 PMID:11805147 GO_REF:0000118 NCBI chrNW_004624792:8,029,383...8,087,824
Ensembl chrNW_004624792:8,029,364...8,084,424 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in ISO (PMID:17241109) UniProt
RGD		 PMID:11092398 PMID:17241109 RGD:730134 NCBI chrNW_004624748:12,527,221...12,555,551
Ensembl chrNW_004624748:12,527,478...12,555,405 		JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in ISO (PMID:18005709) BHF-UCL PMID:18005709 NCBI chrNW_004624733:39,690,958...39,727,503
Ensembl chrNW_004624733:39,698,456...39,808,718 		JBrowse link
regulation of apoptosis involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdx5 peroxiredoxin 5 involved_in ISO (PMID:15276323) UniProt PMID:15276323 NCBI chrNW_004624767:21,995,542...21,998,609
Ensembl chrNW_004624767:21,995,681...21,997,149 		JBrowse link
regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 ISO RGD PMID:34334113 RGD:155882538 NCBI chrNW_004624732:44,097,348...44,226,701
Ensembl chrNW_004624732:44,101,613...44,139,997 		JBrowse link
regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor NOT|acts_upstream_of_or_within ISO (PMID:14970190) MGI PMID:14970190 NCBI chrNW_004624813:233,117...357,507
Ensembl chrNW_004624813:233,042...357,396 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO PMID:17121910 UniProt PMID:17121910 RGD:2293713 NCBI chrNW_004624774:9,363,156...9,391,939
Ensembl chrNW_004624774:9,363,908...9,391,986 		JBrowse link
G Il20ra interleukin 20 receptor subunit alpha acts_upstream_of_or_within ISO (PMID:21844205) MGI PMID:21844205 NCBI chrNW_004624886:741,022...781,041
Ensembl chrNW_004624886:741,346...780,599 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:17053831) MGI PMID:17053831 NCBI chrNW_004624875:3,636,762...3,959,991
Ensembl chrNW_004624875:3,636,924...3,956,576 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624813:2,258,279...2,270,540
Ensembl chrNW_004624813:2,258,279...2,270,824 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624857:4,143,269...4,147,877
Ensembl chrNW_004624857:4,143,270...4,147,877 		JBrowse link
G Siglec15 sialic acid binding Ig like lectin 15 acts_upstream_of_or_within ISO (PMID:22451653) MGI PMID:22451653 NCBI chrNW_004624778:9,472,529...9,487,973 JBrowse link
G Slc4a2 solute carrier family 4 member 2 involved_in ISO (PMID:23341620)
(MGI:5469753|PMID:23341620)		 UniProt PMID:23341620 MGI:5469753 NCBI chrNW_004624800:5,545,380...5,560,789 JBrowse link
regulation of cell proliferation involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:17698607) MGI PMID:17698607 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 involved_in ISO (PMID:9512516)
(MGI:5009210|PMID:9512516)		 UniProt PMID:9512516 MGI:5009210 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759 		JBrowse link
retina blood vessel maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndp norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28575130) Ensembl
MGI		 PMID:28575130 GO_REF:0000107 NCBI chrNW_004624762:11,409,837...11,435,709
Ensembl chrNW_004624762:11,409,727...11,435,811 		JBrowse link
G Vstm4 V-set and transmembrane domain containing 4 acts_upstream_of_or_within ISO (PMID:31698979) MGI PMID:31698979 NCBI chrNW_004624928:847,501...924,779
Ensembl chrNW_004624928:841,527...924,785 		JBrowse link
retina homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15365173)
(PMID:15365178)		 MGI
Ensembl		 PMID:15365173 PMID:15365178 GO_REF:0000107 NCBI chrNW_004624786:7,579,061...7,587,608
Ensembl chrNW_004624786:7,579,098...7,587,608 		JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within ISO (MGI:2159503|PMID:8793730)
(PMID:8793730)		 ARUK-UCL PMID:8793730 MGI:2159503 NCBI chrNW_004624786:10,254,979...10,261,508
Ensembl chrNW_004624786:10,234,492...10,262,367 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO (PMID:15322545) MGI PMID:15322545 NCBI chrNW_004624767:19,875,597...19,893,652
Ensembl chrNW_004624767:19,875,535...19,893,694 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (PMID:15322545)
(PMID:15173597)		 MGI PMID:15173597 PMID:15322545 NCBI chrNW_004624781:1,502,069...1,553,101
Ensembl chrNW_004624781:1,503,816...1,538,755 		JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISO (PMID:19777273) UniProt PMID:19777273 NCBI chrNW_004624822:625,327...658,528
Ensembl chrNW_004624822:617,862...655,803 		JBrowse link
G Cdh3 cadherin 3 involved_in ISO (PMID:23143461) UniProt PMID:23143461 NCBI chrNW_004624746:17,616,296...17,659,021
Ensembl chrNW_004624746:17,616,940...17,658,548 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:28,198,324...28,268,280 JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (PMID:23001562)
(MGI:5461109|PMID:23001562)		 UniProt PMID:23001562 MGI:5461109 NCBI chrNW_004624760:11,576,683...11,598,354
Ensembl chrNW_004624760:11,579,163...11,598,287 		JBrowse link
G Poc1b POC1 centriolar protein B involved_in ISO (PMID:25044745) UniProt PMID:25044745 NCBI chrNW_004624750:17,202,655...17,296,525
Ensembl chrNW_004624750:17,203,391...17,300,129 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004624742:27,302,222...27,319,549
Ensembl chrNW_004624742:27,302,453...27,319,203 		JBrowse link
G Slc28a2 solute carrier family 28 member 2 ISO RGD PMID:16487924 RGD:2317453 NCBI chrNW_004624731:13,999,029...14,051,964
Ensembl chrNW_004624731:13,998,505...14,025,732 		JBrowse link
G Slc28a3 solute carrier family 28 member 3 ISO RGD PMID:16487924 RGD:2317453 NCBI chrNW_004624809:7,855,397...7,943,832
Ensembl chrNW_004624809:7,857,518...7,896,055 		JBrowse link
G Sod1 superoxide dismutase 1 acts_upstream_of_or_within ISO (PMID:16844785) MGI PMID:16844785 NCBI chrNW_004624745:20,032,003...20,037,958
Ensembl chrNW_004624745:20,032,011...20,037,958 		JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO (PMID:15557452) UniProt PMID:15557452 NCBI chrNW_004624754:21,961,513...21,971,362 JBrowse link
G Wdr36 WD repeat domain 36 acts_upstream_of_or_within ISO (PMID:20631153) MGI PMID:20631153 NCBI chrNW_004624743:28,903,013...28,944,353
Ensembl chrNW_004624743:28,903,093...28,942,978 		JBrowse link
G Whrn whirlin involved_in ISO (PMID:17171570)
(MGI:4454934|PMID:20502675)		 HGNC-UCL
UniProt		 PMID:17171570 PMID:20502675 MGI:4454934 NCBI chrNW_004624760:20,700,632...20,788,628
Ensembl chrNW_004624760:20,700,593...20,788,628 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15248
    multicellular organismal process 7142
      multicellular organismal-level homeostasis 866
        tissue homeostasis 275
          amnioserosa maintenance 0
          bone resorption + 79
          cartilage homeostasis 7
          compartment boundary maintenance 0
          epithelial structure maintenance + 31
          homeostasis of number of cells within a tissue + 47
          inhibition of non-skeletal tissue mineralization 5
          maintenance of blood-brain barrier + 22
          maintenance of lens transparency 8
          retina homeostasis + 59
Path 2
Term Annotations click to browse term
  biological_process 15248
    multicellular organismal process 7142
      multicellular organismal-level homeostasis 866
        anatomical structure homeostasis 275
          tissue homeostasis 275
            amnioserosa maintenance 0
            bone resorption + 79
            cartilage homeostasis 7
            compartment boundary maintenance 0
            epithelial structure maintenance + 31
            homeostasis of number of cells within a tissue + 47
            inhibition of non-skeletal tissue mineralization 5
            maintenance of blood-brain barrier + 22
            maintenance of lens transparency 8
            retina homeostasis + 59
paths to the root