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ONTOLOGY REPORT - ANNOTATIONS


Term:tissue homeostasis
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Accession:GO:0001894 term browser browse the term
Definition:A homeostatic process involved in the maintenance of an internal steady state within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function.
Synonyms:narrow_synonym: tissue maintenance



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tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-Coenzyme A carboxylase alpha acts_upstream_of_or_within IMP (PMID:17210641) MGI PMID:17210641 NCBI chr11:84,020,461...84,292,477
Ensembl chr11:84,020,498...84,292,477
JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO lens opacification RGD
MGI
PMID:21376710 GO_REF:0000096 MGI:4417868 RGD:8548687 NCBI chr 6:34,280,865...34,294,424
Ensembl chr 6:34,279,369...34,294,413
JBrowse link
G Ankrd11 ankyrin repeat domain 11 acts_upstream_of_or_within IMP (PMID:17986521) MGI PMID:17986521 NCBI chr 8:123,610,060...123,769,023
Ensembl chr 8:123,610,561...123,769,016
JBrowse link
G Ascl3 achaete-scute family bHLH transcription factor 3 involved_in IMP (MGI:5050445|PMID:21377457) UniProt PMID:21377457 MGI:5050445 NCBI chr 7:109,326,672...109,330,939
Ensembl chr 7:109,326,672...109,330,933
JBrowse link
G Bap1 Brca1 associated protein 1 involved_in IMP (PMID:22878500) MGI PMID:22878500 NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901
JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in IMP (PMID:30735131) MGI PMID:30735131 NCBI chr19:8,814,831...8,826,047
Ensembl chr19:8,814,831...8,826,047
Ensembl chr 2:8,814,831...8,826,047
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within IMP (PMID:23839921) MGI PMID:23839921 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Cd34 CD34 antigen involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:194,621,239...194,643,587
Ensembl chr 1:194,621,127...194,643,587
JBrowse link
G Col11a2 collagen, type XI, alpha 2 acts_upstream_of_or_within IMP (PMID:11237662) MGI PMID:11237662 NCBI chr17:34,257,462...34,285,659
Ensembl chr17:34,258,411...34,285,659
JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IMP (PMID:11237662) MGI PMID:11237662 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:29551664) MGI PMID:29551664 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866
JBrowse link
G Col9a1 collagen, type IX, alpha 1 acts_upstream_of_or_within IMP (PMID:8197187) MGI PMID:8197187 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IMP (PMID:18635608) MGI PMID:18635608 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within IMP (PMID:19439667) MGI PMID:19439667 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349
JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within IMP (PMID:20427744) MGI PMID:20427744 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537
JBrowse link
G Gnasas1 GNAS antisense RNA 1 acts_upstream_of_or_within IMP (PMID:20427744) MGI PMID:20427744 NCBI chr 2:174,123,030...174,137,229
Ensembl chr 2:174,123,024...174,137,229
JBrowse link
G Hoxa13 homeobox A13 acts_upstream_of_or_within IMP (PMID:18483557) MGI PMID:18483557 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) involved_in ISO RGD
GO_Central
MGI
PMID:17118629 GO_REF:0000096 MGI:4417868 RGD:1625131 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Kcnj1 potassium inwardly-rectifying channel, subfamily J, member 1 acts_upstream_of_or_within IMP (PMID:12122007) MGI PMID:12122007 NCBI chr 9:32,283,714...32,310,493
Ensembl chr 9:32,283,789...32,310,493
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within IMP (PMID:20466812) MGI PMID:20466812 NCBI chr 8:108,277,876...108,277,945
Ensembl chr 8:108,277,876...108,277,945
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within IGI (PMID:25100735) MGI PMID:25100735 NCBI chr19:60,744,425...60,748,352
Ensembl chr19:60,744,425...60,748,352
JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within IMP (PMID:32393888) MGI PMID:32393888 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987
JBrowse link
G Nfix nuclear factor I/X acts_upstream_of_or_within IMP (PMID:32393888) MGI PMID:32393888 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide acts_upstream_of_or_within IMP (PMID:17143286) MGI PMID:17143286 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133
JBrowse link
G Perp PERP, TP53 apoptosis effector involved_in IMP (MGI:6765017|PMID:22515648)
(PMID:22515648)
UniProt PMID:22515648 MGI:6765017 NCBI chr10:18,720,819...18,732,821
Ensembl chr10:18,720,768...18,732,821
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:29450535) MGI PMID:29450535 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772
JBrowse link
G Prlh prolactin releasing hormone acts_upstream_of_or_within IMP (PMID:19033670) MGI PMID:19033670 NCBI chr 1:90,879,545...90,881,848
Ensembl chr 1:90,880,830...90,881,749
JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within IGI (PMID:25100735) MGI PMID:25100735 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor involved_in IMP (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 involved_in IMP (MGI:4947506|PMID:20056916)
(PMID:20056916)
UniProt PMID:20056916 MGI:4947506 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Stk11 serine/threonine kinase 11 acts_upstream_of_or_within IMP (PMID:18381428) MGI PMID:18381428 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516
JBrowse link
G Trim32 tripartite motif-containing 32 acts_upstream_of_or_within IMP (PMID:19155210) MGI PMID:19155210 NCBI chr 4:65,523,223...65,534,477
Ensembl chr 4:65,523,223...65,534,475
JBrowse link
G Trp53inp2 transformation related protein 53 inducible nuclear protein 2 acts_upstream_of_or_within IMP (PMID:24713655) MGI PMID:24713655 NCBI chr 2:155,223,742...155,231,767
Ensembl chr 2:155,222,979...155,231,770
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in IMP (MGI:5509071|PMID:23918388) ARUK-UCL PMID:23918388 MGI:5509071 NCBI chr 3:57,363,065...57,483,331
Ensembl chr 3:57,363,070...57,483,331
JBrowse link
G Yap1 yes-associated protein 1 involved_in IMP (MGI:5509071|PMID:23918388) ARUK-UCL PMID:23918388 MGI:5509071 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597
JBrowse link
bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant involved_in
acts_upstream_of_or_within
ISO
IBA
IMP
(PMID:8898228) RGD
GO_Central
MGI
PMID:8898228 PMID:20069278 GO_REF:0000033 RGD:2315871 NCBI chr 9:22,038,023...22,047,042
Ensembl chr 9:22,038,023...22,047,007
JBrowse link
G Adrb2 adrenergic receptor, beta 2 acts_upstream_of_or_within IMP (PMID:15724149) MGI PMID:15724149 NCBI chr18:62,310,784...62,313,052
Ensembl chr18:62,310,887...62,313,030
JBrowse link
G Bbln bublin coiled coil protein acts_upstream_of_or_within IMP (PMID:32569872) MGI PMID:32569872 NCBI chr 2:32,269,120...32,271,877
Ensembl chr 2:32,267,109...32,271,950
JBrowse link
G Cbl Casitas B-lineage lymphoma involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:44,054,273...44,145,556
Ensembl chr 9:44,054,273...44,145,346
JBrowse link
G Ccdc154 coiled-coil domain containing 154 acts_upstream_of_or_within IMP (PMID:20121924) MGI PMID:20121924 NCBI chr17:25,381,142...25,390,887
Ensembl chr17:25,381,435...25,390,887
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within IGI
IMP
(PMID:15866165) MGI PMID:15866165 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:19834056) RGD
GO_Central
MGI
PMID:10430032 PMID:19834056 GO_REF:0000096 MGI:4417868 RGD:1601030 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Ctss cathepsin S involved_in ISO RGD
GO_Central
MGI
PMID:10470376 GO_REF:0000096 MGI:4417868 RGD:5687153 NCBI chr 3:95,434,097...95,463,716
Ensembl chr 3:95,434,097...95,463,714
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IMP (PMID:28798354) MGI PMID:28798354 NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:29415886) MGI PMID:29415886 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555
JBrowse link
G Gpr55 G protein-coupled receptor 55 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:85,860,927...85,924,781
Ensembl chr 1:85,866,039...85,888,729
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within IGI (PMID:15866165) MGI PMID:15866165 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153
JBrowse link
G Iapp islet amyloid polypeptide acts_upstream_of IMP (PMID:14970190) MGI PMID:14970190 NCBI chr 6:142,244,151...142,249,546
Ensembl chr 6:142,244,149...142,249,687
JBrowse link
G Ihh Indian hedgehog acts_upstream_of_or_within IDA (PMID:10208865) MGI PMID:10208865 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831
JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within IDA (PMID:12490655) MGI PMID:12490655 NCBI chr 3:7,637,088...7,678,820
Ensembl chr 3:7,635,054...7,678,820
JBrowse link
G Lrrk1 leucine-rich repeat kinase 1 acts_upstream_of_or_within IMP (PMID:23526378) MGI PMID:23526378 NCBI chr 7:65,908,493...66,038,089
Ensembl chr 7:65,876,660...66,038,098
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within_negative_effect IMP
IDA
(PMID:25043055) MGI PMID:25043055 NCBI chr 4:150,152,911...150,153,012
Ensembl chr 4:150,152,911...150,153,012
JBrowse link
G Ncdn neurochondrin acts_upstream_of_or_within IDA (PMID:10231559) MGI PMID:10231559 NCBI chr 4:126,637,548...126,647,203
Ensembl chr 4:126,637,543...126,647,231
JBrowse link
G Nox4 NADPH oxidase 4 acts_upstream_of_or_within IMP (PMID:11098048) MGI PMID:11098048 NCBI chr 7:86,893,638...87,047,918
Ensembl chr 7:86,895,304...87,047,918
JBrowse link
G Pth1r parathyroid hormone 1 receptor acts_upstream_of_or_within IMP (PMID:9832460) MGI PMID:9832460 NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213
JBrowse link
G Ptk2b PTK2 protein tyrosine kinase 2 beta involved_in IMP (MGI:3040548|PMID:14739300)
(PMID:14739300)
UniProt PMID:14739300 MGI:3040548 NCBI chr14:66,390,706...66,518,549
Ensembl chr14:66,390,706...66,518,501
JBrowse link
G Rab3d RAB3D, member RAS oncogene family involved_in ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 9:21,818,787...21,829,623
Ensembl chr 9:21,818,787...21,829,488
JBrowse link
G Rab7 RAB7, member RAS oncogene family involved_in ISO
IEA
RGD
Ensembl
MGI
PMID:11514537 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:729760 NCBI chr 6:87,976,088...88,022,252
Ensembl chr 6:87,976,088...88,022,252
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO RGD
GO_Central
MGI
PMID:10350213 GO_REF:0000096 MGI:4417868 RGD:1599401 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791
JBrowse link
G Rac2 Rac family small GTPase 2 involved_in ISO
IEA
RGD
GO_Central
Ensembl
MGI
PMID:10350213 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:1599401 NCBI chr15:78,443,369...78,456,983
Ensembl chr15:78,443,367...78,456,983
JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within IMP (PMID:25811986) MGI PMID:25811986 NCBI chr 6:51,500,882...51,567,659
Ensembl chr 6:51,500,881...51,567,659
JBrowse link
G Src Rous sarcoma oncogene involved_in
acts_upstream_of_or_within
IMP (MGI:3040548|PMID:14739300)
(PMID:19448635)
UniProt
MGI
PMID:14739300 PMID:19448635 MGI:3040548 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Tcirg1 T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 acts_upstream_of_or_within IMP (PMID:21305608)
(PMID:23166162), (PMID:23908015)
(PMID:18768394), (PMID:22087326)
MGI PMID:18768394 PMID:21305608 PMID:22087326 PMID:23166162 PMID:23908015 NCBI chr19:3,946,050...3,957,717
Ensembl chr19:3,946,050...3,957,133
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 acts_upstream_of_or_within IDA (PMID:12490655) MGI PMID:12490655 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Tns3 tensin 3 acts_upstream_of_or_within IMP (PMID:27505886) MGI PMID:27505886 NCBI chr11:8,381,652...8,614,758
Ensembl chr11:8,381,652...8,614,681
JBrowse link
G Tpp1 tripeptidyl peptidase I involved_in ISS
ISO
(MGI:3693379|PMID:14609438) UniProt
MGI
PMID:14609438 GO_REF:0000119 MGI:3693379 MGI:4834177 NCBI chr 7:105,394,018...105,401,489
Ensembl chr 7:105,394,018...105,401,442
JBrowse link
G Traf6 TNF receptor-associated factor 6 involved_in IMP (MGI:1335941|PMID:10215628)
(PMID:10215628)
UniProt PMID:10215628 MGI:1335941 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014
JBrowse link
cartilage homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comp cartilage oligomeric matrix protein involved_in IDA
ISO
(MGI:6828896|PMID:32747625)
(PMID:32747625)
UniProt
MGI
PMID:32747625 GO_REF:0000119 MGI:4834177 MGI:6828896 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716
JBrowse link
G Cytl1 cytokine-like 1 acts_upstream_of_or_within IMP (PMID:21652695) MGI PMID:21652695 NCBI chr 5:37,892,863...37,897,164
Ensembl chr 5:37,892,863...37,897,164
JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (PMID:19834056) MGI PMID:19834056 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within IMP (PMID:32227389) MGI PMID:32227389 NCBI chr 3:68,799,832...68,911,939
Ensembl chr 3:68,799,832...68,911,892
JBrowse link
G Mtf1 metal response element binding transcription factor 1 acts_upstream_of IMP (MGI:5577232|PMID:24529376)
(PMID:24529376)
UniProt PMID:24529376 MGI:5577232 NCBI chr 4:124,696,342...124,743,593
Ensembl chr 4:124,695,897...124,743,593
JBrowse link
G Slc39a8 solute carrier family 39 (metal ion transporter), member 8 acts_upstream_of IMP (MGI:5577232|PMID:24529376)
(PMID:24529376)
UniProt PMID:24529376 MGI:5577232 NCBI chr 3:135,522,644...135,594,333
Ensembl chr 3:135,531,040...135,594,333
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO (PMID:24474754) AgBase PMID:24474754 NCBI chr 5:114,760,213...114,796,497
Ensembl chr 5:114,760,213...114,796,482
JBrowse link
epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin involved_in IMP (MGI:6271776|PMID:30361697)
(PMID:30361697)
UniProt PMID:30361697 MGI:6271776 NCBI chr 5:76,803,225...77,021,393
Ensembl chr 5:76,804,359...77,021,392
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within IMP (PMID:15870283) MGI PMID:15870283 NCBI chr 4:140,743,948...140,787,927
Ensembl chr 4:140,743,948...140,787,861
JBrowse link
G Cxadr coxsackie virus and adenovirus receptor involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:78,098,114...78,156,673
Ensembl chr16:78,098,377...78,156,662
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947
JBrowse link
G Ildr1 immunoglobulin-like domain containing receptor 1 involved_in IDA (MGI:5507911|PMID:23239027)
(PMID:23239027)
UniProt PMID:23239027 MGI:5507911 NCBI chr16:36,514,340...36,547,166
Ensembl chr16:36,514,340...36,547,166
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within IGI (PMID:17991461) MGI PMID:17991461 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653
JBrowse link
G Ldb2 LIM domain binding 2 acts_upstream_of_or_within IGI (PMID:17991461) MGI PMID:17991461 NCBI chr 5:44,593,292...44,957,466
Ensembl chr 5:44,629,474...44,957,022
JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IDA (MGI:5507911|PMID:23239027)
(PMID:23239027)
UniProt PMID:23239027 MGI:5507911 NCBI chr 7:30,657,195...30,672,894
Ensembl chr 7:30,657,195...30,672,889
JBrowse link
G Mir204 microRNA 204 acts_upstream_of ISO (PMID:20056717) BHF-UCL PMID:20056717 NCBI chr19:22,727,969...22,728,036
Ensembl chr19:22,727,969...22,728,036
JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within IMP (PMID:21045211)
(PMID:19776033)
(PMID:23454480)
MGI PMID:19776033 PMID:21045211 PMID:23454480 NCBI chr11:87,744,007...87,754,629
Ensembl chr11:87,744,041...87,754,629
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 9:14,613,072...14,651,968
Ensembl chr 9:14,607,526...14,652,036
JBrowse link
G Pkp3 plakophilin 3 involved_in IMP (PMID:26173741) UniProt PMID:26173741 NCBI chr 7:140,658,202...140,670,424
Ensembl chr 7:140,658,131...140,670,423
JBrowse link
G Scrib scribbled planar cell polarity involved_in ISS UniProt GO_REF:0000024 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633
JBrowse link
G Srf serum response factor acts_upstream_of_or_within IMP (PMID:20047077) MGI PMID:20047077 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
homeostasis of number of cells within a tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 acts_upstream_of_or_within IMP (PMID:18723693) MGI PMID:18723693 NCBI chr 5:34,731,008...34,789,652
Ensembl chr 5:34,731,008...34,789,652
JBrowse link
G Akt3 thymoma viral proto-oncogene 3 acts_upstream_of_or_within IMP (PMID:15713641) MGI PMID:15713641 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769
JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IMP (PMID:11413548)
(PMID:15342910)
MGI PMID:11413548 PMID:15342910 NCBI chr 7:45,111,124...45,116,332
Ensembl chr 7:45,111,121...45,116,322
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (PMID:16427619)
(PMID:9241272)
MGI PMID:9241272 PMID:16427619 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004
JBrowse link
G Brinp1 bone morphogenic protein/retinoic acid inducible neural specific 1 acts_upstream_of_or_within IMP (PMID:29960053) MGI PMID:29960053 NCBI chr 4:68,679,609...68,872,634
Ensembl chr 4:68,679,751...68,872,634
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 acts_upstream_of_or_within IMP (PMID:9342361) MGI PMID:9342361 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Cd7 CD7 antigen acts_upstream_of_or_within IMP (PMID:9637484) MGI PMID:9637484 NCBI chr11:120,927,573...120,930,304
Ensembl chr11:120,927,573...120,930,244
JBrowse link
G Col14a1 collagen, type XIV, alpha 1 acts_upstream_of_or_within IMP (PMID:22906538) MGI PMID:22906538 NCBI chr15:55,171,040...55,384,199
Ensembl chr15:55,171,146...55,384,199
JBrowse link
G Coro1a coronin, actin binding protein 1A acts_upstream_of_or_within IMP (PMID:18836449) MGI PMID:18836449 NCBI chr 7:126,298,946...126,303,925
Ensembl chr 7:126,298,945...126,306,959
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) acts_upstream_of_or_within IMP (PMID:9215625) MGI PMID:9215625 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G F2r coagulation factor II thrombin receptor acts_upstream_of_or_within IMP (PMID:18305483) MGI PMID:18305483 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995
JBrowse link
G Fh1 fumarate hydratase 1 acts_upstream_of_or_within IMP (PMID:17418408) MGI PMID:17418408 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201
JBrowse link
G Flt3 FMS-like tyrosine kinase 3 acts_upstream_of_or_within IGI
IMP
(PMID:22674806)
(PMID:20457904)
MGI PMID:20457904 PMID:22674806 NCBI chr 5:147,267,551...147,337,299
Ensembl chr 5:147,267,551...147,337,299
JBrowse link
G Flt3l FMS-like tyrosine kinase 3 ligand acts_upstream_of_or_within IDA
IGI
(PMID:21048959) MGI PMID:21048959 NCBI chr 7:44,780,607...44,785,914
Ensembl chr 7:44,779,212...44,785,856
JBrowse link
G Fosl2 fos-like antigen 2 acts_upstream_of_or_within IDA
IMP
(PMID:33655757)
(PMID:24464219)
MGI PMID:24464219 PMID:33655757 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186
JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within IGI (PMID:14504093) MGI PMID:14504093 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within IGI
IMP
(PMID:14504093)
(PMID:15811962)
MGI PMID:14504093 PMID:15811962 NCBI chr 6:88,170,873...88,184,014
Ensembl chr 6:88,170,873...88,184,014
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within IMP (PMID:19744960) MGI PMID:19744960 NCBI chr 1:87,254,653...87,378,532
Ensembl chr 1:87,254,720...87,378,518
JBrowse link
G Il20rb interleukin 20 receptor beta acts_upstream_of_or_within IMP (PMID:19124723) MGI PMID:19124723 NCBI chr 9:100,339,772...100,368,526
Ensembl chr 9:100,339,772...100,368,841
JBrowse link
G Il7 interleukin 7 acts_upstream_of_or_within IMP (PMID:9252127) MGI PMID:9252127 NCBI chr 3:7,637,088...7,678,820
Ensembl chr 3:7,635,054...7,678,820
JBrowse link
G Ildr2 immunoglobulin-like domain containing receptor 2 acts_upstream_of_or_within IMP (PMID:18654634) MGI PMID:18654634 NCBI chr 1:166,081,630...166,144,405
Ensembl chr 1:166,081,708...166,144,392
JBrowse link
G Klhl10 kelch-like 10 acts_upstream_of_or_within IMP (PMID:15136734) MGI PMID:15136734 NCBI chr11:100,331,954...100,347,853
Ensembl chr11:100,332,743...100,347,848
JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A acts_upstream_of_or_within IGI (PMID:22674806) MGI PMID:22674806 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog acts_upstream_of_or_within IGI (PMID:24675817) MGI PMID:24675817 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lipa lysosomal acid lipase A acts_upstream_of_or_within IMP (PMID:14644759) MGI PMID:14644759 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874
JBrowse link
G Minar2 membrane integral NOTCH2 associated receptor 2 acts_upstream_of_or_within IMP (PMID:35727972) MGI PMID:35727972 NCBI chr18:59,195,264...59,210,034
Ensembl chr18:59,195,320...59,210,034
JBrowse link
G Nfix nuclear factor I/X involved_in IMP (PMID:25331604)
(PMID:27965439)
MGI PMID:25331604 PMID:27965439 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nfkbiz nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta involved_in IMP (PMID:26019294) MGI PMID:26019294 NCBI chr16:55,631,740...55,659,018
Ensembl chr16:55,631,738...55,659,262
JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell involved_in IGI (MGI:6158784|PMID:27107132)
(PMID:27107132)
BHF-UCL PMID:27107132 MGI:6158784 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472
JBrowse link
G Notch1 notch 1 involved_in IGI (MGI:6158784|PMID:27107132)
(PMID:27107132)
BHF-UCL PMID:27107132 MGI:6158784 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 acts_upstream_of_or_within IMP (PMID:16969386) MGI PMID:16969386 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495
JBrowse link
G Pantr2 POU domain, class 3, transcription factor 3 adjacent noncoding transcript 2 acts_upstream_of_or_within IMP (PMID:24381249) MGI PMID:24381249 NCBI chr 1:42,746,221...42,752,614
Ensembl chr 1:42,746,206...42,752,940
JBrowse link
G Prdm14 PR domain containing 14 acts_upstream_of_or_within IMP (PMID:18622394) MGI PMID:18622394 NCBI chr 1:13,183,649...13,197,467
Ensembl chr 1:13,183,681...13,197,387
JBrowse link
G Pth parathyroid hormone acts_upstream_of_or_within IGI (PMID:21048959) MGI PMID:21048959 NCBI chr 7:112,984,783...112,987,879
Ensembl chr 7:112,984,787...112,987,777
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 acts_upstream_of_or_within IGI
IMP
(PMID:24675817) MGI PMID:24675817 NCBI chr 5:121,268,596...121,329,460
Ensembl chr 5:121,268,596...121,329,460
JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within IGI (PMID:23258346) MGI PMID:23258346 NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791
JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within IGI (PMID:23258346) MGI PMID:23258346 NCBI chr11:120,612,294...120,614,795
Ensembl chr11:120,612,296...120,614,795
JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within IMP (PMID:15965476) MGI PMID:15965476 NCBI chr11:75,191,085...75,239,478
Ensembl chr11:75,188,992...75,239,150
JBrowse link
G Sash3 SAM and SH3 domain containing 3 acts_upstream_of_or_within IMP (PMID:16227612) MGI PMID:16227612 NCBI chr  X:47,235,313...47,250,442
Ensembl chr  X:47,235,313...47,250,442
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IDA (PMID:23680462) MGI PMID:23680462 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:24218621) MGI PMID:24218621 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tex15 testis expressed gene 15 meiosis and synapsis associated acts_upstream_of_or_within IMP (PMID:18283110) MGI PMID:18283110 NCBI chr 8:34,006,712...34,082,531
Ensembl chr 8:34,006,766...34,075,610
JBrowse link
G Trgc1 T cell receptor gamma, constant 1 acts_upstream_of_or_within IMP (PMID:15345225) MGI PMID:15345225 NCBI chr13:19,398,273...19,400,788
Ensembl chr13:19,398,273...19,401,194
JBrowse link
G Tuba1a tubulin, alpha 1A involved_in IMP (PMID:21875651) MGI PMID:21875651 NCBI chr15:98,847,728...98,851,382
Ensembl chr15:98,847,718...98,851,584
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within IMP (PMID:22886301) MGI PMID:22886301 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
G Vps54 VPS54 GARP complex subunit acts_upstream_of_or_within
involved_in
IMP (PMID:8815872)
(PMID:24349357)
MGI PMID:8815872 PMID:24349357 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link
homeostasis of number of retina cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elp6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within IMP (PMID:27715390) MGI PMID:27715390 NCBI chr 9:110,133,321...110,151,170
Ensembl chr 9:110,134,241...110,151,170
JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within IMP (PMID:27715390) MGI PMID:27715390 NCBI chr18:77,981,618...78,080,539
Ensembl chr18:77,981,680...78,078,228
JBrowse link
G Gnat2 G protein subunit alpha transducin 2 acts_upstream_of_or_within IMP (PMID:23580486) MGI PMID:23580486 NCBI chr 3:107,994,120...108,008,748
Ensembl chr 3:108,000,105...108,008,748
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within IMP (PMID:22627278) MGI PMID:22627278 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594
JBrowse link
inhibition of non-skeletal tissue mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc6 ATP-binding cassette, sub-family C member 6 involved_in IMP
IGI
(PMID:28652107)
(PMID:24732453)
MGI PMID:24732453 PMID:28652107 NCBI chr 7:45,625,804...45,679,915
Ensembl chr 7:45,616,979...45,679,726
JBrowse link
G Ada adenosine deaminase involved_in ISO (PMID:25644539) MGI PMID:25644539 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159
JBrowse link
G Adora1 adenosine A1 receptor involved_in ISO (PMID:25644539) MGI PMID:25644539 NCBI chr 1:134,126,953...134,163,195
Ensembl chr 1:134,126,963...134,163,169
JBrowse link
G Adora2a adenosine A2a receptor involved_in ISO (PMID:25644539) MGI PMID:25644539 NCBI chr10:75,152,711...75,170,626
Ensembl chr10:75,152,711...75,170,618
JBrowse link
G Alpl alkaline phosphatase, liver/bone/kidney involved_in IMP
IDA
(PMID:21490328) MGI PMID:21490328 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695
JBrowse link
G Ank progressive ankylosis involved_in IMP
IDA
(PMID:15625282)
(PMID:21490328)
MGI PMID:15625282 PMID:21490328 NCBI chr15:27,466,763...27,594,995
Ensembl chr15:27,466,763...27,594,995
JBrowse link
G Atf1 activating transcription factor 1 involved_in ISO (PMID:25644539) MGI PMID:25644539 NCBI chr15:100,125,729...100,159,129
Ensembl chr15:100,125,700...100,159,125
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO (PMID:25644539) MGI PMID:25644539 NCBI chr 1:64,571,963...64,643,707
Ensembl chr 1:64,571,804...64,643,707
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO
IMP
IDA
IGI
(PMID:25644539)
(PMID:23798568), (PMID:26624227), (PMID:26763447), (PMID:27959908), (PMID:28402956), (PMID:28652107)
(PMID:21490328)
(PMID:28652107)
(PMID:15625282)
(PMID:24732453)
MGI PMID:15625282 PMID:21490328 PMID:23798568 PMID:24732453 PMID:25644539 More... NCBI chr10:24,513,812...24,588,057
Ensembl chr10:24,513,812...24,588,057
JBrowse link
G Nt5e 5' nucleotidase, ecto involved_in ISO
IMP
(PMID:25644539) MGI PMID:25644539 NCBI chr 9:88,209,662...88,254,142
Ensembl chr 9:88,209,250...88,254,145
JBrowse link
intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10ra interleukin 10 receptor, alpha involved_in ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 9:45,165,135...45,180,447
Ensembl chr 9:45,165,135...45,180,447
JBrowse link
G Il17a interleukin 17A involved_in IMP (MGI:5788042|PMID:26431948)
(PMID:26431948)
UniProt PMID:26431948 MGI:5788042 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720
JBrowse link
G Inava innate immunity activator involved_in IMP (MGI:6119883|PMID:29420262)
(PMID:29420262)
UniProt PMID:29420262 MGI:6119883 NCBI chr 1:136,141,259...136,162,045
Ensembl chr 1:136,141,269...136,162,002
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:17681175) MGI PMID:17681175 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tlr4 toll-like receptor 4 involved_in IMP (MGI:4421230|PMID:20051628)
(PMID:20051628)
BHF-UCL PMID:20051628 MGI:4421230 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521
JBrowse link
G Zfp830 zinc finger protein 830 acts_upstream_of_or_within IMP (PMID:23213458) MGI PMID:23213458 NCBI chr11:82,655,171...82,658,448
Ensembl chr11:82,655,171...82,656,761
JBrowse link
maintenance of blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP-binding cassette, sub-family B member 1A involved_in ISO
IEA
RGD
Ensembl
PMID:26830080 GO_REF:0000107 RGD:11041002 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575
JBrowse link
G Bdkrb2 bradykinin receptor, beta 2 involved_in ISO RGD
GO_Central
MGI
PMID:20080302 GO_REF:0000096 MGI:4417868 RGD:4891047 NCBI chr12:105,529,431...105,561,503
Ensembl chr12:105,529,485...105,561,496
JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within IMP (PMID:26358779) MGI PMID:26358779 NCBI chr17:43,059,857...43,187,593
Ensembl chr17:43,103,842...43,187,556
JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:18,595,597...18,597,012
Ensembl chr16:18,595,597...18,597,012
JBrowse link
G Mbp myelin basic protein involved_in ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr18:82,492,883...82,603,762
Ensembl chr18:82,493,271...82,603,762
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within IMP (MGI:6196220|PMID:30074985)
(PMID:30074985)
ARUK-UCL PMID:30074985 MGI:6196220 NCBI chr 4:122,840,643...122,855,844
Ensembl chr 4:122,840,643...122,854,981
JBrowse link
G Naglu alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) acts_upstream_of_or_within IMP (PMID:21408219) MGI PMID:21408219 NCBI chr11:100,960,918...100,968,483
Ensembl chr11:100,960,838...100,968,498
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in ISO RGD
MGI
PMID:17704356 GO_REF:0000096 MGI:4417868 RGD:2325928 NCBI chr 2:36,106,758...36,142,287
Ensembl chr 2:36,120,438...36,142,284
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO RGD
GO_Central
MGI
PMID:17704356 GO_REF:0000096 MGI:4417868 RGD:2325928 NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978
JBrowse link
G Slc12a2 solute carrier family 12, member 2 acts_upstream_of_or_within IMP (MGI:6392927|PMID:28577991)
(PMID:28577991)
ARUK-UCL PMID:28577991 MGI:6392927 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893
JBrowse link
G Slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 acts_upstream_of_or_within IMP (MGI:6393184|PMID:25350110) ARUK-UCL PMID:25350110 MGI:6393184 NCBI chr19:28,812,535...28,891,360
Ensembl chr19:28,812,449...28,891,360
JBrowse link
G Tspan12 tetraspanin 12 acts_upstream_of_or_within IMP (PMID:30478038) MGI PMID:30478038 NCBI chr 6:21,771,390...21,879,557
Ensembl chr 6:21,771,394...21,852,514
JBrowse link
G Wnk3 WNK lysine deficient protein kinase 3 acts_upstream_of_or_within IMP (MGI:6221361|PMID:27782176)
(PMID:27782176)
ARUK-UCL PMID:27782176 MGI:6221361 NCBI chr  X:149,951,774...150,103,190
Ensembl chr  X:149,981,074...150,103,148
JBrowse link
maintenance of gastrointestinal epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cracd capping protein inhibiting regulator of actin involved_in IMP
IBA
(MGI:6271776|PMID:30361697)
(PMID:30361697)
UniProt
GO_Central
PMID:30361697 GO_REF:0000033 MGI:6271776 NCBI chr 5:76,803,225...77,021,393
Ensembl chr 5:76,804,359...77,021,392
JBrowse link
G Htr4 5 hydroxytryptamine (serotonin) receptor 4 involved_in IDA (PMID:33299969) UniProt PMID:33299969 NCBI chr18:62,456,618...62,636,098
Ensembl chr18:62,457,275...62,629,648
JBrowse link
G Muc13 mucin 13, epithelial transmembrane involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:33,614,407...33,640,299
Ensembl chr16:33,614,407...33,640,304
JBrowse link
G Muc2 mucin 2 involved_in ISO
IDA
(MGI:6471838|PMID:33093110), (PMID:35337837) MGI
GO_Central
UniProt
PMID:33093110 PMID:35337837 GO_REF:0000119 MGI:4834177 MGI:6471838 NCBI chr 7:141,276,583...141,308,428
Ensembl chr 7:141,276,583...141,308,430
JBrowse link
G Muc4 mucin 4 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:32,555,089...32,602,786
Ensembl chr16:32,555,015...32,602,754
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102
JBrowse link
G Pbld1 phenazine biosynthesis-like protein domain containing 1 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:62,896,404...62,913,743
Ensembl chr10:62,895,941...62,913,741
JBrowse link
G Pbld2 phenazine biosynthesis-like protein domain containing 2 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:62,858,319...62,894,592
Ensembl chr10:62,860,094...62,894,592
JBrowse link
G Rbp4 retinol binding protein 4, plasma involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729
JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 6:137,712,080...137,728,928
Ensembl chr 6:137,712,076...137,728,930
JBrowse link
G Tff1 trefoil factor 1 involved_in ISO
IBA
RGD
GO_Central
PMID:8836141 GO_REF:0000033 RGD:625375 NCBI chr17:31,380,369...31,384,034
Ensembl chr17:31,380,369...31,384,251
JBrowse link
G Tff2 trefoil factor 2 (spasmolytic protein 1) involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:31,360,036...31,363,256
Ensembl chr17:31,360,023...31,363,256
JBrowse link
G Tff3 trefoil factor 3, intestinal involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:31,344,280...31,348,585
Ensembl chr17:31,344,280...31,348,620
JBrowse link
G Tlr9 toll-like receptor 9 involved_in IMP (MGI:4399015|PMID:17128265)
(PMID:17128265)
BHF-UCL PMID:17128265 MGI:4399015 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082
JBrowse link
G Vsig1 V-set and immunoglobulin domain containing 1 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:21991385) GO_Central
MGI
PMID:21991385 GO_REF:0000033 NCBI chr  X:139,808,357...139,840,221
Ensembl chr  X:139,808,357...139,840,221
JBrowse link
maintenance of lens transparency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 involved_in ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000096 MGI:4417868 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 involved_in IMP (MGI:5648704|PMID:25757569) UniProt PMID:25757569 MGI:5648704 NCBI chr 5:66,456,068...66,779,189
Ensembl chr 5:66,456,046...66,776,127
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:154,498,949...154,536,703
Ensembl chr 2:154,493,625...154,536,705
JBrowse link
G Foxc1 forkhead box C1 involved_in IMP (MGI:5314489|PMID:22171010)
(PMID:22171010)
UniProt PMID:22171010 MGI:5314489 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:41,013,417...41,114,368
Ensembl chr13:41,013,230...41,114,368
JBrowse link
G Muc5ac mucin 5, subtypes A and C, tracheobronchial/gastric acts_upstream_of_or_within IMP (PMID:23272068) MGI PMID:23272068 NCBI chr 7:141,342,695...141,372,964
Ensembl chr 7:141,342,709...141,372,968
JBrowse link
G Stk39 serine/threonine kinase 39 involved_in IMP (MGI:5766617|PMID:25515571)
(PMID:25515571)
ParkinsonsUK-UCL PMID:25515571 MGI:5766617 NCBI chr 2:68,040,789...68,302,381
Ensembl chr 2:68,040,789...68,302,612
JBrowse link
G Vps13b vacuolar protein sorting 13B involved_in IMP (MGI:6455609|PMID:32915983) UniProt PMID:32915983 MGI:6455609 NCBI chr15:35,371,264...35,931,375
Ensembl chr15:35,371,306...35,931,375
JBrowse link
negative regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP-binding cassette, sub-family C member 8 involved_in ISO RGD
GO_Central
MGI
PMID:18854840 GO_REF:0000096 MGI:4417868 RGD:2325137 NCBI chr 7:45,753,952...45,829,441
Ensembl chr 7:45,753,947...45,829,457
JBrowse link
G Ifnb1 interferon beta 1, fibroblast involved_in ISO RGD
GO_Central
MGI
PMID:12973019 PMID:12973022 GO_REF:0000096 MGI:4417868 RGD:401851924 RGD:401851925 NCBI chr 4:88,440,253...88,441,083
Ensembl chr 4:88,440,262...88,441,011
JBrowse link
G Sh3gl2 SH3-domain GRB2-like 2 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:85,123,663...85,307,617
Ensembl chr 4:85,123,363...85,557,432
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
negative regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin/calcitonin-related polypeptide, alpha involved_in ISO (PMID:10822112), (PMID:17241109) UniProt PMID:10822112 PMID:17241109 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Cartpt CART prepropeptide involved_in IGI
ISO
(MGI:3696590|PMID:16614075)
(PMID:16614075)
HGNC-UCL
GO_Central
MGI
PMID:16614075 GO_REF:0000119 MGI:3696590 MGI:4834177 NCBI chr13:100,034,991...100,037,191
Ensembl chr13:100,034,997...100,037,599
JBrowse link
G Cd38 CD38 antigen involved_in ISO
IEA
RGD
Ensembl
GO_Central
MGI
PMID:10477767 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:2307268 NCBI chr 5:44,026,153...44,069,714
Ensembl chr 5:44,025,895...44,069,717
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within IMP (PMID:25490771) MGI PMID:25490771 NCBI chr 7:25,161,127...25,177,072
Ensembl chr 7:25,161,132...25,177,028
JBrowse link
G Cldn18 claudin 18 acts_upstream_of_or_within IMP (PMID:22437732) MGI PMID:22437732 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Csk c-src tyrosine kinase involved_in ISO
IEA
RGD
Ensembl
GO_Central
MGI
PMID:10411542 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:5134371 NCBI chr 9:57,533,929...57,560,758
Ensembl chr 9:57,533,929...57,560,914
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 involved_in ISO RGD
GO_Central
MGI
PMID:8694895 GO_REF:0000096 MGI:4417868 RGD:7257714 NCBI chr 9:54,073,221...54,175,448
Ensembl chr 9:54,073,221...54,175,394
JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within IMP (PMID:11089565), (PMID:17332067) MGI PMID:11089565 PMID:17332067 NCBI chr17:89,292,380...89,508,103
Ensembl chr17:89,292,380...89,508,103
JBrowse link
G Gpr137 G protein-coupled receptor 137 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:6,915,425...6,919,818
Ensembl chr19:6,915,425...6,919,848
JBrowse link
G Gpr137b G protein-coupled receptor 137B involved_in IMP
IBA
(MGI:6362357|PMID:31173907)
(PMID:31173907)
UniProt
GO_Central
PMID:31173907 GO_REF:0000033 MGI:6362357 NCBI chr13:13,528,035...13,568,250
Ensembl chr13:13,532,205...13,568,599
JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within IMP (PMID:24561287) MGI PMID:24561287 NCBI chr 7:30,641,793...30,643,454
Ensembl chr 7:30,641,793...30,643,457
JBrowse link
G Iapp islet amyloid polypeptide acts_upstream_of_or_within IMP (PMID:14970190) MGI PMID:14970190 NCBI chr 6:142,244,151...142,249,546
Ensembl chr 6:142,244,149...142,249,687
JBrowse link
G Il6 interleukin 6 involved_in IMP (MGI:5795829|PMID:11159963)
(PMID:11159963)
BHF-UCL PMID:11159963 MGI:5795829 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:12161749) MGI
GO_Central
PMID:12161749 GO_REF:0000033 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 acts_upstream_of_or_within IMP (PMID:12677010) MGI PMID:12677010 NCBI chr 5:122,781,990...122,830,399
Ensembl chr 5:122,781,974...122,829,495
JBrowse link
G Tmem119 transmembrane protein 119 involved_in IMP (MGI:5543589|PMID:22416756)
(PMID:22416756)
ARUK-UCL PMID:22416756 MGI:5543589 NCBI chr 5:113,931,790...113,938,457
Ensembl chr 5:113,931,790...113,938,577
JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) involved_in ISO
IEA
RGD
Ensembl
GO_Central
MGI
PMID:11839361 PMID:16912914 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:1624170 RGD:730196 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880
JBrowse link
G Ubash3b ubiquitin associated and SH3 domain containing, B acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:23149425) MGI
GO_Central
PMID:23149425 GO_REF:0000033 NCBI chr 9:40,922,056...41,069,358
Ensembl chr 9:40,922,394...41,072,993
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO RGD
GO_Central
MGI
PMID:15312247 GO_REF:0000096 MGI:4417868 RGD:1580559 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP-binding cassette, sub-family A member 4 acts_upstream_of_or_within IMP (PMID:11431429) MGI PMID:11431429 NCBI chr 3:121,837,547...121,973,719
Ensembl chr 3:121,838,092...121,973,772
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr13:81,243,187...81,781,504
Ensembl chr13:81,243,187...81,781,273
JBrowse link
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide acts_upstream_of_or_within IMP (MGI:69165|PMID:7525597)
(PMID:7525597)
ARUK-UCL PMID:7525597 MGI:69165 NCBI chr11:69,490,554...69,496,786
Ensembl chr11:69,490,562...69,496,768
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656
JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr10:111,134,540...111,137,597
Ensembl chr10:111,134,540...111,137,588
JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22869374), (PMID:22958920) MGI
GO_Central
PMID:22869374 PMID:22958920 GO_REF:0000033 NCBI chr 3:37,366,695...37,383,334
Ensembl chr 3:37,366,703...37,375,602
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within IMP (PMID:15539463) MGI PMID:15539463 NCBI chr 8:94,794,580...94,825,997
Ensembl chr 8:94,794,582...94,825,556
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP
IGI
(PMID:16794820), (PMID:21444805)
(PMID:17591906), (PMID:20398886), (PMID:23943788)
(PMID:23943788)
MGI PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791
JBrowse link
G Bsg basigin involved_in IMP
ISO
(MGI:6436439|PMID:25957687) UniProt
GO_Central
MGI
PMID:25957687 GO_REF:0000119 MGI:4834177 MGI:6436439 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803
JBrowse link
G Cdh23 cadherin related 23 (otocadherin) involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269
JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:11738025) MGI
GO_Central
PMID:11738025 GO_REF:0000119 MGI:4834177 NCBI chr14:36,799,806...36,820,304
Ensembl chr14:36,799,814...36,820,304
JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within IGI
IMP
(PMID:23943788) MGI PMID:23943788 NCBI chr10:100,323,410...100,409,527
Ensembl chr10:100,323,420...100,410,702
JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in IDA (MGI:5487486|PMID:23023331)
(PMID:23023331)
UniProt PMID:23023331 MGI:5487486 NCBI chr 9:54,452,074...54,467,512
Ensembl chr 9:54,452,078...54,467,502
JBrowse link
G Clcn3 chloride channel, voltage-sensitive 3 acts_upstream_of_or_within IMP (PMID:11182090) MGI PMID:11182090 NCBI chr 8:61,363,423...61,436,351
Ensembl chr 8:61,363,423...61,436,334
JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within IMP (PMID:15565184), (PMID:9151333) MGI PMID:9151333 PMID:15565184 NCBI chr 8:14,931,335...14,951,720
Ensembl chr 8:14,931,335...14,951,720
JBrowse link
G Clrn1 clarin 1 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 3:58,751,449...58,792,633
Ensembl chr 3:58,751,449...58,792,761
JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 acts_upstream_of_or_within IMP (PMID:15634774) MGI PMID:15634774 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213
JBrowse link
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated acts_upstream_of_or_within IMP (PMID:17234588), (PMID:25147295) MGI PMID:17234588 PMID:25147295 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838
JBrowse link
G Crb2 crumbs family member 2 involved_in IMP (MGI:5461109|PMID:23001562)
(PMID:23001562)
UniProt PMID:23001562 MGI:5461109 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within IMP (PMID:15870283) MGI PMID:15870283 NCBI chr 4:140,743,948...140,787,927
Ensembl chr 4:140,743,948...140,787,861
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 involved_in
acts_upstream_of_or_within
IMP
IBA
ISO
(MGI:5705208|PMID:25983245)
(PMID:25983245)
(PMID:37691820)
UniProt
GO_Central
MGI
PMID:25983245 PMID:37691820 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5705208 NCBI chr 3:106,455,114...106,482,657
Ensembl chr 3:106,455,114...106,483,206
JBrowse link
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 acts_upstream_of_or_within IMP (PMID:17145777) MGI PMID:17145777 NCBI chr14:32,235,248...32,302,947
Ensembl chr14:32,235,478...32,302,947
JBrowse link
G Esrrb estrogen related receptor, beta involved_in IMP (MGI:4457950|PMID:20534447)
(PMID:20534447)
UniProt PMID:20534447 MGI:4457950 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402
JBrowse link
G Iqcb1 IQ calmodulin-binding motif containing 1 involved_in ISS
ISO
(MGI:3763297|PMID:15723066)
(PMID:15723066)
HGNC-UCL
GO_Central
MGI
PMID:15723066 GO_REF:0000119 MGI:3763297 MGI:4834177 NCBI chr16:36,648,722...36,694,044
Ensembl chr16:36,648,747...36,693,083
JBrowse link
G Lca5 Leber congenital amaurosis 5 (human) acts_upstream_of_or_within IMP (PMID:21606596) MGI PMID:21606596 NCBI chr 9:83,273,408...83,325,047
Ensembl chr 9:83,272,346...83,323,180
JBrowse link
G Mak male germ cell-associated kinase acts_upstream_of_or_within
involved_in
IMP (PMID:21148103) MGI
UniProt
PMID:21148103 NCBI chr13:41,178,483...41,233,182
Ensembl chr13:41,178,484...41,233,182
JBrowse link
G Map1a microtubule-associated protein 1 A acts_upstream_of_or_within IGI (PMID:22323461) MGI PMID:22323461 NCBI chr 2:121,119,608...121,141,313
Ensembl chr 2:121,120,081...121,141,313
JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (PMID:16170314)
(PMID:15772095)
MGI PMID:15772095 PMID:16170314 NCBI chr 2:136,715,700...136,733,422
Ensembl chr 2:136,715,700...136,733,309
JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) involved_in ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017
JBrowse link
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) acts_upstream_of_or_within IMP (PMID:21078623) MGI PMID:21078623 NCBI chr 4:152,561,163...152,647,641
Ensembl chr 4:152,561,163...152,647,640
JBrowse link
G Nxnl1 nucleoredoxin-like 1 involved_in IMP
ISO
(MGI:6436439|PMID:25957687)
(PMID:25957687)
UniProt
GO_Central
MGI
PMID:25957687 GO_REF:0000119 MGI:4834177 MGI:6436439 NCBI chr 8:72,013,211...72,019,291
Ensembl chr 8:72,013,199...72,019,245
JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 MGI:2152098 NCBI chr13:51,324,256...51,329,227
Ensembl chr13:51,325,058...51,329,224
JBrowse link
G Pcdh15 protocadherin 15 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha acts_upstream_of_or_within IMP (PMID:22183357) MGI PMID:22183357 NCBI chr18:61,353,546...61,426,698
Ensembl chr18:61,353,387...61,422,995
JBrowse link
G Prom1 prominin 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:44,150,963...44,260,850
Ensembl chr 5:44,150,962...44,259,374
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IMP (MGI:6508517|PMID:32312889)
(PMID:32312889)
(PMID:22183357)
UniProt
MGI
PMID:22183357 PMID:32312889 MGI:6508517 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997
JBrowse link
G Rp1 retinitis pigmentosa 1 (human) involved_in IMP (MGI:3604930|PMID:16126734)
(PMID:16126734)
UniProt PMID:16126734 MGI:3604930 NCBI chr 1:4,185,896...4,479,508
Ensembl chr 1:4,069,780...4,479,464
JBrowse link
G Rp1l1 retinitis pigmentosa 1 homolog like 1 involved_in IMP
ISO
(MGI:4353917|PMID:19657028)
(PMID:19657028)
UniProt
GO_Central
MGI
PMID:19657028 GO_REF:0000119 MGI:4353917 MGI:4834177 NCBI chr14:64,229,880...64,270,955
Ensembl chr14:64,229,955...64,272,474
JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IMP
IBA
(MGI:5608598|PMID:25398945)
(PMID:25398945)
UniProt
GO_Central
PMID:25398945 GO_REF:0000033 MGI:5608598 NCBI chr12:98,594,169...98,636,078
Ensembl chr12:98,594,416...98,636,074
JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within IMP (PMID:10629044) MGI PMID:10629044 NCBI chr 7:108,610,087...108,633,666
Ensembl chr 7:108,549,545...108,633,667
JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within
IMP (MGI:4397555|PMID:19218615)
(PMID:10607826)
(PMID:10549638), (PMID:17525220)
(PMID:22183357)
UniProt
MGI
PMID:10549638 PMID:10607826 PMID:17525220 PMID:19218615 PMID:22183357 MGI:4397555 NCBI chr17:28,570,489...28,584,190
Ensembl chr17:28,570,489...28,584,196
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 7:45,844,774...45,887,984
Ensembl chr 7:45,844,774...45,887,927
JBrowse link
G Ush1g USH1 protein network component sans involved_in ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867
JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within
ISO
IMP
(PMID:17360538) MGI
GO_Central
PMID:17360538 GO_REF:0000119 MGI:4834177 NCBI chr 1:187,995,035...188,697,694
Ensembl chr 1:187,994,220...188,697,238
JBrowse link
G Usp45 ubiquitin specific petidase 45 involved_in IMP (MGI:6383248|PMID:30573563)
(PMID:30573563)
UniProt PMID:30573563 MGI:6383248 NCBI chr 4:21,767,161...21,837,872
Ensembl chr 4:21,767,156...21,837,872
JBrowse link
positive regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr15:42,288,063...42,540,373
Ensembl chr15:42,288,119...42,540,373
JBrowse link
G Ocln occludin involved_in ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr13:100,633,012...100,689,226
Ensembl chr13:100,633,015...100,689,226
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:64,945,913...65,177,629
Ensembl chr 7:64,945,913...65,177,529
JBrowse link
G Tjp2 tight junction protein 2 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:24,071,860...24,202,492
Ensembl chr19:24,071,869...24,202,394
JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:81,109,022...81,127,415
Ensembl chr10:81,109,041...81,127,415
JBrowse link
positive regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 a disintegrin and metallopeptidase domain 8 involved_in IDA
IMP
(MGI:5009189|PMID:11341326)
(PMID:20683884)
(PMID:11341326)
(MGI:5009349|PMID:20683884)
BHF-UCL PMID:11341326 PMID:20683884 MGI:5009189 MGI:5009349 NCBI chr 7:139,558,845...139,573,016
Ensembl chr 7:139,558,845...139,572,475
JBrowse link
G Ahsg alpha-2-HS-glycoprotein involved_in ISO RGD
GO_Central
MGI
PMID:10500999 GO_REF:0000096 MGI:4417868 RGD:1625797 NCBI chr16:22,710,793...22,718,193
Ensembl chr16:22,710,027...22,718,199
JBrowse link
G Car2 carbonic anhydrase 2 involved_in ISO RGD
GO_Central
MGI
PMID:8674544 GO_REF:0000096 MGI:4417868 RGD:1600722 NCBI chr 3:14,951,329...14,965,830
Ensembl chr 3:14,951,333...14,965,830
JBrowse link
G Dcstamp dendrocyte expressed seven transmembrane protein involved_in IMP (MGI:3588832|PMID:16061724), (MGI:5426134|PMID:17164993), (MGI:5426135|PMID:16937266) UniProt PMID:16061724 PMID:16937266 PMID:17164993 MGI:3588832 MGI:5426134 MGI:5426135 NCBI chr15:39,609,326...39,624,334
Ensembl chr15:39,609,326...39,624,334
JBrowse link
G Def8 differentially expressed in FDCP 8 involved_in IMP (MGI:5806241|PMID:27777970)
(PMID:27777970)
UniProt PMID:27777970 MGI:5806241 NCBI chr 8:124,169,725...124,190,009
Ensembl chr 8:124,150,266...124,190,009
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
IMP
ISO
(PMID:21308776) MGI PMID:21308776 GO_REF:0000008 NCBI chr12:109,418,411...109,429,262
Ensembl chr12:109,418,749...109,429,262
JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO
IEA
RGD
GO_Central
Ensembl
MGI
PMID:2981075 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:10395245 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Fcgr4 Fc receptor, IgG, low affinity IV involved_in IMP (MGI:5641770|PMID:25824719)
(PMID:25824719)
UniProt PMID:25824719 MGI:5641770 NCBI chr 1:170,846,495...170,857,330
Ensembl chr 1:170,846,489...170,857,330
JBrowse link
G Fshb follicle stimulating hormone beta acts_upstream_of_or_within IMP (PMID:16630814) MGI PMID:16630814 NCBI chr 2:106,886,331...106,889,996
Ensembl chr 2:106,886,485...106,890,001
JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (PMID:19834056) MGI PMID:19834056 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423
JBrowse link
G Itgb3 integrin beta 3 involved_in IC
ISO
(MGI:3766172|PMID:16995821)
(PMID:16995821)
BHF-UCL
GO_Central
MGI
RGD
PMID:8603604 PMID:16995821 GO_REF:0000096 MGI:3766172 MGI:4417868 RGD:5024929 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302
JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 acts_upstream_of_or_within IMP (PMID:18505367) MGI PMID:18505367 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within IMP (PMID:15878314) MGI PMID:15878314 NCBI chr19:5,790,928...5,808,564
Ensembl chr19:5,790,932...5,808,560
JBrowse link
G Mc4r melanocortin 4 receptor involved_in IMP
ISO
(MGI:3696590|PMID:16614075)
(PMID:16614075)
HGNC-UCL
GO_Central
MGI
PMID:16614075 GO_REF:0000119 MGI:3696590 MGI:4834177 NCBI chr18:66,990,776...66,993,558
Ensembl chr18:66,990,775...66,993,577
JBrowse link
G Mir9718 microRNA 9718 acts_upstream_of_or_within IMP (PMID:25019593) MGI PMID:25019593 NCBI chr12:73,092,659...73,092,722
Ensembl chr12:73,092,659...73,092,722
JBrowse link
G Oscar osteoclast associated receptor acts_upstream_of_or_within IMP (PMID:11805147) MGI PMID:11805147 NCBI chr 7:3,612,812...3,619,156
Ensembl chr 7:3,612,812...3,619,156
JBrowse link
G Plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 involved_in IMP (MGI:5806241|PMID:27777970)
(PMID:27777970)
UniProt PMID:27777970 MGI:5806241 NCBI chr11:103,255,101...103,303,531
Ensembl chr11:103,255,101...103,303,513
JBrowse link
G Ppargc1b peroxisome proliferative activated receptor, gamma, coactivator 1 beta involved_in IMP (MGI:3838421|PMID:19252502)
(PMID:19252502)
DFLAT PMID:19252502 MGI:3838421 NCBI chr18:61,424,516...61,533,846
Ensembl chr18:61,431,207...61,533,502
JBrowse link
G Prkca protein kinase C, alpha involved_in IMP (MGI:5284791|PMID:16014375)
(PMID:16014375)
BHF-UCL PMID:16014375 MGI:5284791 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754
JBrowse link
G Ptger4 prostaglandin E receptor 4 (subtype EP4) involved_in ISO RGD
GO_Central
MGI
PMID:11792579 GO_REF:0000096 MGI:4417868 RGD:729815 NCBI chr15:5,262,880...5,273,668
Ensembl chr15:5,236,142...5,273,668
JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:11792563 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1581129 NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916
JBrowse link
G Src Rous sarcoma oncogene involved_in ISO
IEA
RGD
GO_Central
Ensembl
MGI
PMID:8514886 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:150524326 NCBI chr 2:157,265,828...157,313,758
Ensembl chr 2:157,260,364...157,313,782
JBrowse link
G Syk spleen tyrosine kinase involved_in IMP (MGI:3703840|PMID:17353363)
(PMID:17353363)
UniProt PMID:17353363 MGI:3703840 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828
JBrowse link
G Tfrc transferrin receptor involved_in IDA (MGI:3838421|PMID:19252502)
(PMID:19252502)
DFLAT PMID:19252502 MGI:3838421 NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612
JBrowse link
G Tmem64 transmembrane protein 64 involved_in
acts_upstream_of_or_within
IBA
IMP
(PMID:23395171) GO_Central
MGI
PMID:23395171 GO_REF:0000033 NCBI chr 4:15,265,820...15,286,753
Ensembl chr 4:15,265,831...15,286,753
JBrowse link
G Tnfrsf11a tumor necrosis factor receptor superfamily, member 11a, NFKB activator acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:11805147) MGI
GO_Central
PMID:11805147 GO_REF:0000033 NCBI chr 1:105,708,443...105,777,172
Ensembl chr 1:105,708,443...105,775,709
JBrowse link
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 involved_in ISO RGD
GO_Central
MGI
PMID:11092398 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:730134 NCBI chr14:78,514,886...78,545,483
Ensembl chr14:78,514,885...78,545,483
JBrowse link
G Trf transferrin involved_in IDA (MGI:3838421|PMID:19252502)
(PMID:19252502)
DFLAT PMID:19252502 MGI:3838421 NCBI chr 9:103,086,075...103,107,485
Ensembl chr 9:103,081,200...103,107,643
JBrowse link
positive regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a21 solute carrier family 22 (organic cation transporter), member 21 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:53,840,780...53,871,159
Ensembl chr11:53,840,791...53,871,158
JBrowse link
G Slc22a5 solute carrier family 22 (organic cation transporter), member 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:53,755,368...53,782,609
Ensembl chr11:53,755,368...53,782,486
JBrowse link
regulation of apoptosis involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prdx5 peroxiredoxin 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:6,884,065...6,887,474
Ensembl chr19:6,884,065...6,887,474
JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in IMP (MGI:6268242|PMID:30389919) UniProt PMID:30389919 MGI:6268242 NCBI chr  X:41,148,483...41,198,541
Ensembl chr  X:41,148,556...41,198,533
JBrowse link
regulation of blood-brain barrier permeability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO RGD
GO_Central
MGI
PMID:34334113 GO_REF:0000096 MGI:4417868 RGD:155882538 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407
JBrowse link
regulation of bone resorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calcr calcitonin receptor NOT|acts_upstream_of_or_within IMP (PMID:14970190) MGI PMID:14970190 NCBI chr 6:3,685,678...3,764,713
Ensembl chr 6:3,685,680...3,764,714
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000096 MGI:4417868 NCBI chr18:61,238,644...61,264,211
Ensembl chr18:61,233,670...61,265,221
JBrowse link
G Il20ra interleukin 20 receptor, alpha acts_upstream_of_or_within IMP (PMID:21844205) MGI PMID:21844205 NCBI chr10:19,587,421...19,635,801
Ensembl chr10:19,588,318...19,635,801
JBrowse link
G Itgav integrin alpha V involved_in TAS (MGI:5284791|PMID:16014375)
(PMID:16014375)
BHF-UCL PMID:16014375 MGI:5284791 NCBI chr 2:83,554,796...83,637,261
Ensembl chr 2:83,554,741...83,637,260
JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:17053831) MGI PMID:17053831 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase, isoenzyme 4 involved_in IMP (MGI:5303050|PMID:21803180)
(PMID:21803180)
UniProt PMID:21803180 MGI:5303050 NCBI chr 6:5,483,351...5,496,278
Ensembl chr 6:5,483,351...5,496,309
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in IMP (MGI:3839226|PMID:19204730)
(PMID:19204730)
UniProt PMID:19204730 MGI:3839226 NCBI chr 3:115,504,082...115,508,704
Ensembl chr 3:115,504,082...115,508,721
JBrowse link
G Siglec15 sialic acid binding Ig-like lectin 15 acts_upstream_of_or_within
involved_in
IMP
IBA
(PMID:22451653) MGI
GO_Central
PMID:22451653 GO_REF:0000033 NCBI chr18:78,085,708...78,100,656
Ensembl chr18:78,086,829...78,100,610
JBrowse link
G Slc4a2 solute carrier family 4 (anion exchanger), member 2 involved_in IMP (MGI:5469753|PMID:23341620)
(PMID:23341620)
UniProt PMID:23341620 MGI:5469753 NCBI chr 5:24,628,834...24,645,945
Ensembl chr 5:24,628,835...24,645,948
JBrowse link
regulation of cell proliferation involved in tissue homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:17698607) MGI PMID:17698607 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
regulation of intestinal epithelial structure maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neurogenic differentiation 1 involved_in IDA (MGI:5009210|PMID:9512516)
(PMID:9512516)
UniProt PMID:9512516 MGI:5009210 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095
JBrowse link
retina blood vessel maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndp Norrie disease (pseudoglioma) (human) acts_upstream_of_or_within IMP (PMID:28575130) MGI PMID:28575130 NCBI chr  X:16,751,760...16,778,013
Ensembl chr  X:16,751,760...16,778,013
JBrowse link
G Vstm4 V-set and transmembrane domain containing 4 acts_upstream_of_or_within IMP (PMID:31698979) MGI PMID:31698979 NCBI chr14:32,578,713...32,661,448
Ensembl chr14:32,578,713...32,661,448
JBrowse link
retina homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within IMP (PMID:15365173)
(PMID:15365178)
MGI PMID:15365173 PMID:15365178 NCBI chr11:71,919,527...71,933,184
Ensembl chr11:71,918,789...71,928,335
JBrowse link
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide acts_upstream_of_or_within IMP (MGI:2159503|PMID:8793730)
(PMID:8793730)
ARUK-UCL PMID:8793730 MGI:2159503 NCBI chr11:69,490,554...69,496,786
Ensembl chr11:69,490,562...69,496,768
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within IMP (PMID:15322545) MGI PMID:15322545 NCBI chr19:4,936,906...4,956,681
Ensembl chr19:4,936,906...4,956,656
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within IMP (PMID:15173597)
(PMID:15322545)
MGI PMID:15173597 PMID:15322545 NCBI chr 9:59,229,249...59,260,791
Ensembl chr 9:59,229,273...59,260,791
JBrowse link
G Ccdc66 coiled-coil domain containing 66 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:27,203,047...27,230,467
Ensembl chr14:27,203,047...27,230,417
JBrowse link
G Cdh3 cadherin 3 involved_in ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 8:107,237,484...107,283,543
Ensembl chr 8:107,237,523...107,283,929
JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213
JBrowse link
G Crb2 crumbs family member 2 involved_in IMP (MGI:5461109|PMID:23001562)
(PMID:23001562)
UniProt PMID:23001562 MGI:5461109 NCBI chr 2:37,666,238...37,689,115
Ensembl chr 2:37,666,261...37,689,115
JBrowse link
G Poc1b POC1 centriolar protein B involved_in ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr10:98,942,918...99,033,936
Ensembl chr10:98,942,898...99,033,936
JBrowse link
G Rpe65 retinal pigment epithelium 65 involved_in ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 3:159,304,712...159,330,944
Ensembl chr 3:159,304,812...159,330,958
JBrowse link
G Slc28a2 solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 involved_in ISO
IBA
RGD
GO_Central
MGI
PMID:16487924 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:2317453 NCBI chr 2:122,256,836...122,291,633
Ensembl chr 2:122,256,958...122,291,618
JBrowse link
G Slc28a2b solute carrier family 28 member 2b involved_in ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 2:122,315,422...122,358,521
Ensembl chr 2:122,315,422...122,358,521
JBrowse link
G Slc28a3 solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 involved_in ISO RGD
GO_Central
MGI
PMID:16487924 GO_REF:0000096 MGI:4417868 RGD:2317453 NCBI chr13:58,701,121...58,758,691
Ensembl chr13:58,693,213...58,758,691
JBrowse link
G Sod1 superoxide dismutase 1, soluble acts_upstream_of_or_within IMP (PMID:16844785) MGI PMID:16844785 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217
JBrowse link
G Tulp1 TUB like protein 1 involved_in ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:28,570,489...28,584,190
Ensembl chr17:28,570,489...28,584,196
JBrowse link
G Wdr36 WD repeat domain 36 acts_upstream_of_or_within IMP (PMID:20631153) MGI PMID:20631153 NCBI chr18:32,970,241...33,000,008
Ensembl chr18:32,970,278...33,000,647
JBrowse link
G Whrn whirlin involved_in IDA
ISO
(MGI:4454934|PMID:20502675)
(PMID:20502675)
UniProt
GO_Central
MGI
PMID:20502675 GO_REF:0000119 MGI:4454934 MGI:4834177 NCBI chr 4:63,333,145...63,414,320
Ensembl chr 4:63,333,147...63,414,228
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28760
    multicellular organismal process 9050
      multicellular organismal-level homeostasis 1017
        tissue homeostasis 303
          amnioserosa maintenance 0
          bone resorption + 85
          cartilage homeostasis 7
          compartment boundary maintenance 0
          epithelial structure maintenance + 37
          homeostasis of number of cells within a tissue + 52
          inhibition of non-skeletal tissue mineralization 10
          maintenance of blood-brain barrier + 23
          maintenance of lens transparency 8
          retina homeostasis + 62
Path 2
Term Annotations click to browse term
  biological_process 28760
    multicellular organismal process 9050
      multicellular organismal-level homeostasis 1017
        anatomical structure homeostasis 303
          tissue homeostasis 303
            amnioserosa maintenance 0
            bone resorption + 85
            cartilage homeostasis 7
            compartment boundary maintenance 0
            epithelial structure maintenance + 37
            homeostasis of number of cells within a tissue + 52
            inhibition of non-skeletal tissue mineralization 10
            maintenance of blood-brain barrier + 23
            maintenance of lens transparency 8
            retina homeostasis + 62
paths to the root