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ONTOLOGY REPORT - ANNOTATIONS


Term:embryonic placenta development
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Accession:GO:0001892 term browser browse the term
Definition:The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.
Synonyms:exact_synonym: fetal placenta development


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embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arnt aryl hydrocarbon receptor nuclear translocator IEA
ISO
GO_REF:0000107
MGI:1857680 (MGI:3703383|PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 MGI:3703383 NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179
JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO MGI:3823037 (MGI:3821803|PMID:18794365) RGD PMID:18794365 MGI:3821803 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEA
ISO
GO_REF:0000107
MGI:88373 (MGI:3511604|PMID:15509779)
Ensembl
RGD
PMID:15509779 GO_REF:0000107 MGI:3511604 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO MGI:99480 (MGI:3511604|PMID:15509779) RGD PMID:15509779 MGI:3511604 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:2176158 (MGI:3628724|PMID:16579983) RGD PMID:16579983 MGI:3628724 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Csf2 colony stimulating factor 2 ISO MGI:1930997 (MGI:4360451|PMID:19228596) RGD PMID:19228596 MGI:4360451 NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070
JBrowse link
G Egfr epidermal growth factor receptor ISO MGI:1856402 (MGI:74263|PMID:7618084) RGD PMID:7618084 MGI:74263 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEA
ISO
GO_REF:0000107
MGI:106918 (MGI:3703383|PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 MGI:3703383 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Esrrb estrogen-related receptor beta ISO MGI:1857422 (MGI:1095811|PMID:9285590) RGD PMID:9285590 MGI:1095811 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Foxd3 forkhead box D3 ISO MGI:2388719 (MGI:3604420|PMID:16039639) RGD PMID:16039639 MGI:3604420 NCBI chr 5:118,346,283...118,349,120 JBrowse link
G Gata2 GATA binding protein 2 ISO MGI:1857743 (MGI:86206|PMID:9043071) RGD PMID:9043071 MGI:86206 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:2137552|MGI:3706565 (MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
GO_REF:0000107
MGI:109169|MGI:2179429 (MGI:3703383|PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 MGI:3703383 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hsf1 heat shock transcription factor 1 ISO MGI:2155444 (MGI:1347429|PMID:10545106) RGD PMID:10545106 MGI:1347429 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Igf2 insulin-like growth factor 2 ISS
ISO
GO_REF:0000024
(MGI:2181513|PMID:12087403)
UniProt
RGD
PMID:12087403 GO_REF:0000024 MGI:2181513 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:2684189 (MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:1856970|MGI:2158730 (MGI:2138058|PMID:11456449) RGD PMID:11456449 MGI:2138058 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISS
ISO
GO_REF:0000024
(MGI:3039044|PMID:15084468)
UniProt
RGD
PMID:15084468 GO_REF:0000024 MGI:3039044 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (MGI:4836293|PMID:20862291) RGD PMID:20862291 MGI:4836293 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO MGI:1860840 (MGI:3612025|PMID:16301212), (MGI:4836293|PMID:20862291) RGD PMID:16301212 PMID:20862291 MGI:3612025 MGI:4836293 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Prdm1 PR/SET domain 1 ISO MGI:3605483 (MGI:3604853|PMID:15750184) RGD PMID:15750184 MGI:3604853 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO MGI:4849923 (MGI:4867054|PMID:21302256) RGD PMID:21302256 MGI:4867054 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 ISO MGI:3581891 (MGI:3581379|PMID:15964823) RGD PMID:15964823 MGI:3581379 NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011
JBrowse link
G Tfeb transcription factor EB ISO (MGI:1306865|PMID:9806910) RGD PMID:9806910 MGI:1306865 NCBI chr 9:15,208,141...15,264,101
Ensembl chr 9:15,207,822...15,214,596
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 ISO MGI:4456438 (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
JBrowse link
G Ttpa alpha tocopherol transfer protein ISO MGI:2386172 (MGI:3691723|PMID:16014812) RGD PMID:16014812 MGI:3691723 NCBI chr 5:34,007,926...34,029,315
Ensembl chr 5:34,007,920...34,028,452
JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO MGI:2176598 (MGI:3689296|PMID:16981008) RGD PMID:16981008 MGI:3689296 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:2153790 (MGI:1197797|PMID:9435295) RGD PMID:9435295 MGI:1197797 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Gcm1 glial cells missing transcription factor 1 ISO MGI:2183479 (MGI:1860502|PMID:10888880) RGD PMID:10888880 MGI:1860502 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Grb2 growth factor receptor bound protein 2 ISO MGI:2677457 (MGI:1934095|PMID:11369229) RGD PMID:11369229 MGI:1934095 NCBI chr10:104,193,953...104,263,071
Ensembl chr10:104,193,955...104,263,071
JBrowse link
G Il10 interleukin 10 ISO MGI:1857199 (MGI:3664708|PMID:12842419) RGD PMID:12842419 MGI:3664708 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 ISO MGI:4331862 (MGI:5052233|PMID:21606200) RGD PMID:21606200 MGI:5052233 NCBI chr10:104,367,826...104,403,726
Ensembl chr10:104,368,247...104,403,724
JBrowse link
G Rspo3 R-spondin 3 ISO MGI:3695687 (MGI:3695333|PMID:16963017) RGD PMID:16963017 MGI:3695333 NCBI chr 1:30,681,648...30,768,038
Ensembl chr 1:30,681,681...30,766,860
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:2180861 (MGI:2137984|PMID:11481489)
Ensembl
RGD
PMID:11481489 GO_REF:0000107 MGI:2137984 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 ISO MGI:3709554 (MGI:3700412|PMID:17174946) RGD PMID:17174946 MGI:3700412 NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011
JBrowse link
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin ISO (MGI:1354065|PMID:10716450) RGD PMID:10716450 MGI:1354065 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Gcm1 glial cells missing transcription factor 1 ISO
IBA
MGI:2183479 (MGI:1860502|PMID:10888880)
PMID:21873635
RGD PMID:10888880, PMID:21873635 MGI:1860502, RGD:13792537 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Krt19 keratin 19 ISO MGI:96705 (MGI:1926669|PMID:11062258) RGD PMID:11062258 MGI:1926669 NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561
JBrowse link
G Krt8 keratin 8 ISO MGI:96693 (MGI:1926669|PMID:11062258) RGD PMID:11062258 MGI:1926669 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G Stk3 serine/threonine kinase 3 IEA
ISO
GO_REF:0000107
MGI:1929004 (MGI:4412133|PMID:19786569)
Ensembl
RGD
PMID:19786569 GO_REF:0000107 MGI:4412133 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:1928487 (MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:4412133 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Ccn1 cellular communication network factor 1 IEA
ISO
GO_REF:0000107
MGI:2446577 (MGI:2446415|PMID:12446788)
Ensembl
RGD
PMID:12446788 GO_REF:0000107 MGI:2446415 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ISO MGI:2151092 (MGI:1329806|PMID:10021343) RGD PMID:10021343 MGI:1329806 NCBI chr 4:2,711,329...2,774,969
Ensembl chr 4:2,711,385...2,774,890
JBrowse link
G Erf Ets2 repressor factor ISO MGI:3719472 (MGI:3718929|PMID:17502352) RGD PMID:17502352 MGI:3718929 NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902
JBrowse link
G Itga4 integrin subunit alpha 4 ISO MGI:1857206 (MGI:70927|PMID:7539359) RGD PMID:7539359 MGI:70927 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
MGI:98504 (MGI:1334099|PMID:10090727)
Ensembl
RGD
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO MGI:1857452|MGI:2153830 (MGI:70297|PMID:7530222), (MGI:70924|PMID:7539357) RGD PMID:7530222 PMID:7539357 MGI:70297 MGI:70924 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Wnt7b Wnt family member 7B ISO MGI:2387443 (MGI:2150456|PMID:11543617) RGD PMID:11543617 MGI:2150456 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISO MGI:3050540 (MGI:3047495|PMID:15226444) RGD PMID:15226444 MGI:3047495 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721
JBrowse link
G Igf2 insulin-like growth factor 2 IEA
ISO
GO_REF:0000107
(MGI:5908476|PMID:28522536)
Ensembl
RGD
PMID:28522536 GO_REF:0000107 MGI:5908476 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO MGI:4437211 (MGI:4431136|PMID:20133625) RGD PMID:20133625 MGI:4431136 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Trim28 tripartite motif-containing 28 ISO MGI:1928907 (MGI:5300649|PMID:22110054) RGD PMID:22110054 MGI:5300649 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO MGI:2153830 (MGI:70297|PMID:7530222) RGD PMID:7530222 MGI:70297 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Wnt7b Wnt family member 7B ISO MGI:2387443 (MGI:2150456|PMID:11543617) RGD PMID:11543617 MGI:2150456 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4340678 (MGI:5634845|PMID:25758223) RGD PMID:25758223 MGI:5634845 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 ISO MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO MGI:1338031 (MGI:4360135|PMID:19592578) RGD PMID:19592578 MGI:4360135 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO MGI:2675202 (MGI:2673047|PMID:12783884) RGD PMID:12783884 MGI:2673047 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO MGI:2675202 (MGI:2673047|PMID:12783884) RGD PMID:12783884 MGI:2673047 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Ccn1 cellular communication network factor 1 IEA
ISO
GO_REF:0000107
MGI:2446577 (MGI:2446415|PMID:12446788)
Ensembl
RGD
PMID:12446788 GO_REF:0000107 MGI:2446415 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Esx1 ESX homeobox 1 ISO MGI:2153820 (MGI:1306980|PMID:9806555) RGD PMID:9806555 MGI:1306980 NCBI chr  X:107,753,614...107,763,561 JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 ISO MGI:3665136 (MGI:3653956|PMID:16880526) RGD PMID:16880526 MGI:3653956 NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138
JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO
GO_REF:0000107
MGI:2177951 (MGI:1329850|PMID:11092808)
Ensembl
RGD
PMID:11092808 GO_REF:0000107 MGI:1329850 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 ISO
IEA
MGI:4072637 (MGI:5779255|PMID:26764350)
GO_REF:0000107
RGD
Ensembl
PMID:26764350 GO_REF:0000107 MGI:5779255 NCBI chr10:72,156,729...72,188,834
Ensembl chr10:72,156,728...72,188,308
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(MGI:4453944|PMID:20122914)
Ensembl
RGD
PMID:20122914 GO_REF:0000107 MGI:4453944 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 ISO MGI:3715259 (MGI:3715036|PMID:17405882) RGD PMID:17405882 MGI:3715036 NCBI chr 9:42,620,006...42,659,184
Ensembl chr 9:42,620,006...42,659,184
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEA
ISO
GO_REF:0000107
MGI:2153821 (MGI:1332277|PMID:10022836)
Ensembl
RGD
PMID:10022836 GO_REF:0000107 MGI:1332277 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 ISO MGI:4331862 (MGI:5052233|PMID:21606200) RGD PMID:21606200 MGI:5052233 NCBI chr10:104,367,826...104,403,726
Ensembl chr10:104,368,247...104,403,724
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO MGI:3055889 (MGI:3041910|PMID:14622137) RGD PMID:14622137 MGI:3041910 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 ISO MGI:2445463|MGI:2450859 (MGI:2445240|PMID:12368298), (MGI:2450041|PMID:12556486) RGD PMID:12368298 PMID:12556486 MGI:2445240 MGI:2450041 NCBI chr 3:150,919,317...150,990,391
Ensembl chr 3:150,919,317...150,960,030
JBrowse link
G Nfe2 nuclear factor, erythroid 2 ISO MGI:1857224 (MGI:5049808|PMID:21558372) RGD PMID:21558372 MGI:5049808 NCBI chr 7:144,872,739...144,880,092
Ensembl chr 7:144,872,747...144,880,092
JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like ISO MGI:1862021 (MGI:3690259|PMID:17028112) RGD PMID:17028112 MGI:3690259 NCBI chr  X:152,933,118...152,964,399
Ensembl chr  X:152,933,069...152,964,390
JBrowse link
G Ovol2 ovo-like zinc finger 2 ISO MGI:3777011 (MGI:3776202|PMID:17573777) RGD PMID:17573777 MGI:3776202 NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
JBrowse link
G Plcd1 phospholipase C, delta 1 ISO MGI:107451 (MGI:3610693|PMID:16314520) RGD PMID:16314520 MGI:3610693 NCBI chr 8:127,753,514...127,782,070
Ensembl chr 8:127,753,539...127,782,070
JBrowse link
G Plcd3 phospholipase C, delta 3 ISO MGI:97614 (MGI:3610693|PMID:16314520) RGD PMID:16314520 MGI:3610693 NCBI chr10:91,164,778...91,186,067
Ensembl chr10:91,164,812...91,186,054
JBrowse link
G Plg plasminogen ISO MGI:1857291 (MGI:2668370|PMID:12900459) RGD PMID:12900459 MGI:2668370 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 ISO MGI:5905625 (MGI:5903668|PMID:27917469) RGD PMID:27917469 MGI:5903668 NCBI chr 7:14,037,646...14,043,632
Ensembl chr 7:14,037,620...14,043,779
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 ISO (MGI:4453264|PMID:20178780) RGD PMID:20178780 MGI:4453264 NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297
JBrowse link
G Vash1 vasohibin 1 ISO MGI:3846783 (MGI:5648606|PMID:25184477) RGD PMID:25184477 MGI:5648606 NCBI chr 6:110,624,377...110,640,942
Ensembl chr 6:110,624,856...110,637,382
JBrowse link
G Vash2 vasohibin 2 ISO MGI:3846784 (MGI:5648606|PMID:25184477) RGD PMID:25184477 MGI:5648606 NCBI chr13:109,521,190...109,552,607
Ensembl chr13:109,521,190...109,552,589
JBrowse link
G Wnt2 Wnt family member 2 ISO MGI:2177935 (MGI:84248|PMID:8951051) RGD PMID:8951051 MGI:84248 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
labyrinthine layer development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc6 baculoviral IAP repeat-containing 6 ISO MGI:3512417 (MGI:3511408|PMID:15485903) RGD PMID:15485903 MGI:3511408 NCBI chr 6:21,900,763...22,092,484
Ensembl chr 6:21,950,100...22,092,346
JBrowse link
G Cdx2 caudal type homeo box 2 ISO MGI:88362 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
JBrowse link
G Cdx4 caudal type homeo box 4 ISO MGI:88361 (MGI:4398801|PMID:19853565) RGD PMID:19853565 MGI:4398801 NCBI chr  X:74,165,172...74,173,758
Ensembl chr  X:74,165,187...74,173,347
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO MGI:3028946 (MGI:3027297|PMID:14673158) RGD PMID:14673158 MGI:3027297 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 ISO MGI:3690045 (MGI:3689683|PMID:16966370) RGD PMID:16966370 MGI:3689683 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Ervfrd-1 endogenous retrovirus group FRD member 1, envelope ISO MGI:3852417 (MGI:3851857|PMID:19564597) RGD PMID:19564597 MGI:3851857 NCBI chr12:25,161,130...25,168,182
Ensembl chr12:25,161,130...25,168,182
JBrowse link
G Gab1 GRB2-associated binding protein 1 ISO MGI:1926435 (MGI:1355592|PMID:10779359) RGD PMID:10779359 MGI:1355592 NCBI chr19:30,794,290...30,903,819
Ensembl chr19:30,794,571...30,902,008
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 ISO MGI:4072637 (MGI:5779255|PMID:26764350) RGD PMID:26764350 MGI:5779255 NCBI chr10:72,156,729...72,188,834
Ensembl chr10:72,156,728...72,188,308
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IEA
ISO
GO_REF:0000107
MGI:2178132 (MGI:1334781|PMID:10209122)
Ensembl
RGD
PMID:10209122 GO_REF:0000107 MGI:1334781 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Pcdh12 protocadherin 12 ISO MGI:3512625 (MGI:3804356|PMID:18477666) RGD PMID:18477666 MGI:3804356 NCBI chr18:31,415,533...31,431,108
Ensembl chr18:31,414,250...31,430,973
JBrowse link
G Senp2 SUMO specific peptidase 2 ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 ISO MGI:5905625 (MGI:5903668|PMID:27917469) RGD PMID:27917469 MGI:5903668 NCBI chr 7:14,037,646...14,043,632
Ensembl chr 7:14,037,620...14,043,779
JBrowse link
G Vash2 vasohibin 2 ISO MGI:3846784 (MGI:5648606|PMID:25184477) RGD PMID:25184477 MGI:5648606 NCBI chr13:109,521,190...109,552,607
Ensembl chr13:109,521,190...109,552,589
JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esx1 ESX homeobox 1 ISO MGI:2153820 (MGI:1306980|PMID:9806555) RGD PMID:9806555 MGI:1306980 NCBI chr  X:107,753,614...107,763,561 JBrowse link
G Gjb5 gap junction protein, beta 5 ISO MGI:3769388 (MGI:3768289|PMID:17961533) RGD PMID:17961533 MGI:3768289 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO MGI:1276535 (MGI:5316949|PMID:20685850) RGD PMID:20685850 MGI:5316949 NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO MGI:1276523 (MGI:5316949|PMID:20685850) RGD PMID:20685850 MGI:5316949 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 ISO (MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:1270969 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 ISO (PMID:19219068) RGD PMID:19219068 NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002
JBrowse link
G Stk3 serine/threonine kinase 3 IEA
ISO
GO_REF:0000107
MGI:1929004 (MGI:5603236|PMID:24595170)
Ensembl
RGD
PMID:24595170 GO_REF:0000107 MGI:5603236 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:1928487 (MGI:5603236|PMID:24595170) RGD PMID:24595170 MGI:5603236 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase ISO MGI:5292103 (MGI:5287920|PMID:21715335) RGD PMID:21715335 MGI:5287920 NCBI chr  X:109,940,439...110,036,361
NCBI chr  X:110,065,199...110,089,124
Ensembl chr  X:109,940,350...110,033,085
JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 ISO MGI:2181542 (MGI:5749303|PMID:26476147) RGD PMID:26476147 MGI:5749303 NCBI chr 1:216,701,345...216,704,479
Ensembl chr 1:216,702,319...216,703,534
JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 IEA
ISO
GO_REF:0000107
(MGI:5424276|PMID:22562201)
Ensembl
RGD
PMID:22562201 GO_REF:0000107 MGI:5424276 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO MGI:2153832 (MGI:1097723|PMID:9331331) RGD PMID:9331331 MGI:1097723 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Gjb5 gap junction protein, beta 5 ISO MGI:3769388 (MGI:3768289|PMID:17961533) RGD PMID:17961533 MGI:3768289 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:2137552 (MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Lif LIF, interleukin 6 family cytokine IEA
ISO
GO_REF:0000107
MGI:1201791 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:2180861|MGI:96787 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
spongiotrophoblast layer development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin ISO MGI:2176598 (MGI:3689296|PMID:16981008) RGD PMID:16981008 MGI:3689296 NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 ISO (PMID:12917334) RGD PMID:12917334 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 ISO MGI:3512417 (MGI:3511408|PMID:15485903) RGD PMID:15485903 MGI:3511408 NCBI chr 6:21,900,763...22,092,484
Ensembl chr 6:21,950,100...22,092,346
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO MGI:3028946 (MGI:3027297|PMID:14673158) RGD PMID:14673158 MGI:3027297 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 ISO MGI:3665136 (MGI:3653956|PMID:16880526) RGD PMID:16880526 MGI:3653956 NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138
JBrowse link
G Senp2 SUMO specific peptidase 2 ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630
JBrowse link
G Zfat zinc finger and AT hook domain containing ISO MGI:4829941 (MGI:4822499|PMID:20660741) RGD PMID:20660741 MGI:4822499 NCBI chr 7:109,037,777...109,207,511
Ensembl chr 7:109,037,845...109,205,354
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISO MGI:3050540 (MGI:3047495|PMID:15226444) RGD PMID:15226444 MGI:3047495 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 ISO MGI:3808477 (MGI:5432627|PMID:22729990) RGD PMID:22729990 MGI:5432627 NCBI chr  X:157,931,450...158,133,506
Ensembl chr  X:158,569,056...158,569,577
Ensembl chr  X:158,569,056...158,569,577
JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ISO MGI:2151092 (MGI:5294250|PMID:21972064) RGD PMID:21972064 MGI:5294250 NCBI chr 4:2,711,329...2,774,969
Ensembl chr 4:2,711,385...2,774,890
JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:3,280,311...3,285,451
Ensembl chr17:3,280,311...3,285,451
JBrowse link
G E2f7 E2F transcription factor 7 ISS
ISO
GO_REF:0000024
(MGI:5449497|PMID:23064266)
UniProt
RGD
PMID:23064266 GO_REF:0000024 MGI:5449497 NCBI chr 7:53,275,659...53,318,261
Ensembl chr 7:53,275,676...53,316,481
JBrowse link
G E2f8 E2F transcription factor 8 IEA
ISO
ISS
GO_REF:0000107
(MGI:5449497|PMID:23064266)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 NCBI chr 1:104,185,436...104,203,683
Ensembl chr 1:104,187,100...104,202,591
JBrowse link
G Erf Ets2 repressor factor ISO MGI:3719472 (MGI:3718929|PMID:17502352) RGD PMID:17502352 MGI:3718929 NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902
JBrowse link
G Gjb5 gap junction protein, beta 5 ISO (MGI:5605134|PMID:24866916) RGD PMID:24866916 MGI:5605134 NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 ISS
ISO
GO_REF:0000024
(MGI:3625684|PMID:16759287), (MGI:4359361|PMID:17891141), (MGI:5518521|PMID:23911935)
UniProt
RGD
PMID:16759287 PMID:17891141 PMID:23911935 GO_REF:0000024 MGI:3625684 MGI:4359361 MGI:5518521 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 ISO MGI:2137552 (MGI:5604339|PMID:24855001) RGD PMID:24855001 MGI:5604339 NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446
JBrowse link
G Lif LIF, interleukin 6 family cytokine IEA
ISO
GO_REF:0000107
MGI:1201791 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642
JBrowse link
G Mdfi MyoD family inhibitor ISO MGI:2155446 (MGI:1312999|PMID:9799236) RGD PMID:9799236 MGI:1312999 NCBI chr 9:15,166,118...15,184,469
Ensembl chr 9:15,166,118...15,184,468
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 ISO MGI:2385933 (MGI:3708079|PMID:17404209) RGD PMID:17404209 MGI:3708079 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Plg plasminogen ISO MGI:1857291 (MGI:2668370|PMID:12900459) RGD PMID:12900459 MGI:2668370 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Plk4 polo-like kinase 4 ISS
ISO
GO_REF:0000024
(MGI:4359361|PMID:17891141)
UniProt
RGD
PMID:17891141 GO_REF:0000024 MGI:4359361 NCBI chr 2:127,686,911...127,705,518
Ensembl chr 2:127,686,925...127,705,518
JBrowse link
G Prdm1 PR/SET domain 1 ISO MGI:5439582 (MGI:5438144|PMID:22987638) RGD PMID:22987638 MGI:5438144 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Senp2 SUMO specific peptidase 2 ISO MGI:3832730 (MGI:3831588|PMID:19090619) RGD PMID:19090619 MGI:3831588 NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630
JBrowse link
G Snai1 snail family transcriptional repressor 1 ISO (MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:1270969 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEA
ISO
GO_REF:0000107
MGI:2180861|MGI:96787 (MGI:3609466|PMID:16258063)
Ensembl
RGD
PMID:16258063 GO_REF:0000107 MGI:3609466 NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040
JBrowse link
G Sox15 SRY-box transcription factor 15 ISO (MGI:3625684|PMID:16759287) RGD PMID:16759287 MGI:3625684 NCBI chr10:56,260,514...56,263,503
Ensembl chr10:56,260,514...56,263,503
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    reproductive process 1799
      developmental process involved in reproduction 1189
        embryonic placenta development 109
          cell differentiation involved in embryonic placenta development + 31
          cell proliferation involved in embryonic placenta development + 3
          cell-cell signaling involved in placenta development 0
          embryonic placenta morphogenesis + 31
          labyrinthine layer development + 59
          spongiotrophoblast layer development + 17
Path 2
Term Annotations click to browse term
  biological_process 20045
    developmental process 6824
      anatomical structure development 6290
        multicellular organism development 5766
          embryo development 1310
            embryo development ending in birth or egg hatching 863
              chordate embryonic development 847
                in utero embryonic development 544
                  embryonic placenta development 109
                    cell differentiation involved in embryonic placenta development + 31
                    cell proliferation involved in embryonic placenta development + 3
                    cell-cell signaling involved in placenta development 0
                    embryonic placenta morphogenesis + 31
                    labyrinthine layer development + 59
                    spongiotrophoblast layer development + 17
paths to the root