ONTOLOGY REPORT - ANNOTATIONS
Term: phagocytic cup
Accession: GO:0001891
browse the term
Definition: An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome.
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Abca7
ATP binding cassette subfamily A member 7
located_in
ISS ISO
GO_REF:0000024 (MGI:3662940|PMID:16908670)
Alzheimers_University_of_Toronto RGD
PMID:16908670
GO_REF:0000024 MGI:3662940
NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
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Abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase
located_in
ISO
(MGI:5449460|PMID:23100514)
RGD
PMID:23100514
MGI:5449460
NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
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Adgrb1
adhesion G protein-coupled receptor B1
located_in
ISO
(MGI:3764740|PMID:17960134)
RGD
PMID:17960134
MGI:3764740
NCBI chr 7:106,404,844...106,476,902
Ensembl chr 7:106,404,958...106,476,902
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Aif1
allograft inflammatory factor 1
located_in
ISS ISO
GO_REF:0000024 (MGI:3042556|PMID:14756805), (MGI:5315376|PMID:10934045)
UniProt RGD
PMID:10934045 PMID:14756805
GO_REF:0000024 MGI:3042556 MGI:5315376
NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
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Anxa1
annexin A1
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
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Arhgap12
Rho GTPase activating protein 12
located_in
ISO
(PMID:26465210)
RGD
PMID:26465210
NCBI chr17:51,588,810...51,702,417
Ensembl chr17:51,588,842...51,702,080
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Arhgap25
Rho GTPase activating protein 25
located_in is_active_in
ISO IBA
(PMID:26465210) PMID:21873635
RGD
PMID:26465210 PMID:21873635
RGD:13792537
NCBI chr 4:119,896,844...119,974,982
Ensembl chr 4:119,896,844...119,974,982
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Bin2
bridging integrator 2
colocalizes_with
ISO ISS IBA
(PMID:23285027) GO_REF:0000024 PMID:21873635
RGD UniProt
PMID:23285027 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 7:131,742,001...131,768,208
Ensembl chr 7:131,742,002...131,786,285
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Cdc42se2
CDC42 small effector 2
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr10:38,836,549...38,905,056
Ensembl chr10:38,836,555...38,905,059
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Clec4e
C-type lectin domain family 4, member E
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 4:156,606,927...156,612,911
Ensembl chr 4:156,607,614...156,612,767
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Coro1a
coronin 1A
located_in
ISO
(PMID:17442961)
RGD
PMID:17442961
NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
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Dnm2
dynamin 2
IDA
RGD
PMID:12802072
RGD:9685290
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
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Irgm
immunity-related GTPase M
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Lcp1
lymphocyte cytosolic protein 1
located_in
ISO
(MGI:3042556|PMID:14756805)
RGD
PMID:14756805
MGI:3042556
NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
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Megf10
multiple EGF-like domains 10
located_in
ISO
(PMID:17205124) (MGI:4414741|PMID:19915564)
RGD
PMID:17205124 PMID:19915564
MGI:4414741
NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
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Myo1g
myosin IG
located_in
ISO
(MGI:5566942|PMID:24310084), (MGI:5586792|PMID:23038771)
RGD
PMID:23038771 PMID:24310084
MGI:5566942 MGI:5586792
NCBI chr14:81,386,701...81,401,843
Ensembl chr14:81,386,701...81,401,843
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Pear1
platelet endothelial aggregation receptor 1
located_in
ISO
(MGI:4414741|PMID:19915564)
RGD
PMID:19915564
MGI:4414741
NCBI chr 2:173,206,298...173,234,106
Ensembl chr 2:173,207,664...173,227,440
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Pip5k1c
phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
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Rab11fip2
RAB11 family interacting protein 2
located_in is_active_in
ISO IBA
(PMID:30883606) PMID:21873635
RGD
PMID:30883606 PMID:21873635
RGD:13792537
NCBI chr 1:258,950,535...259,094,555
Ensembl chr 1:258,923,873...259,093,752
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Rab31
RAB31, member RAS oncogene family
located_in
ISS ISO
GO_REF:0000024 (MGI:6271154|PMID:25568335)
UniProt RGD
PMID:25568335
GO_REF:0000024 MGI:6271154
NCBI chr 9:105,246,712...105,382,973
Ensembl chr 9:105,246,709...105,381,253
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Rac1
Rac family small GTPase 1
located_in
ISO
(MGI:5315376|PMID:10934045)
RGD
PMID:10934045
MGI:5315376
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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Rack1
receptor for activated C kinase 1
located_in
ISO ISS
(PMID:21347310) GO_REF:0000024
RGD UniProt
PMID:21347310
GO_REF:0000024
NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975
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Sh3bp1
SH3-domain binding protein 1
located_in
ISS ISO
GO_REF:0000024 (PMID:26465210)
UniProt RGD
PMID:26465210
GO_REF:0000024
NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
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Snx5
sorting nexin 5
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 3:131,621,709...131,641,205
Ensembl chr 3:131,621,880...131,641,192
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Syt11
synaptotagmin 11
located_in
ISO
(MGI:5468041|PMID:23303671)
RGD
PMID:23303671
MGI:5468041
NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
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Ticam2
TIR domain containing adaptor molecule 2
located_in
ISO
(PMID:30883606)
RGD
PMID:30883606
NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
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Tlr4
toll-like receptor 4
located_in
ISO IEA
(PMID:30883606) GO_REF:0000107
RGD Ensembl
PMID:30883606
GO_REF:0000107
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tnf
tumor necrosis factor
located_in
ISO
(MGI:3610792|PMID:16282525)
RGD
PMID:16282525
MGI:3610792
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Trip10
thyroid hormone receptor interactor 10
located_in
IEA
GO_REF:0000044
UniProt
GO_REF:0000044
NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
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