ONTOLOGY REPORT - ANNOTATIONS
Term: liver development
Accession: GO:0001889
browse the term
Definition: The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.
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AACS
acetoacetyl-CoA synthetase
ISO
RGD
PMID:10513626
RGD:2301023
NCBI chr12:122,660,621...122,737,421
Ensembl chr12:126,942,340...127,019,372
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ACADM
acyl-CoA dehydrogenase medium chain
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3692159|PMID:16121256)
MGI Ensembl
PMID:16121256
GO_REF:0000107 MGI:3692159
NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840
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ACAT1
acetyl-CoA acetyltransferase 1
ISO
RGD
PMID:5166591
RGD:2326169
NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
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ACAT2
acetyl-CoA acetyltransferase 2
ISO
RGD
PMID:5166591
RGD:2326169
NCBI chr 6:157,644,894...157,661,965
Ensembl chr 6:162,656,497...162,673,606
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ACO1
aconitase 1
ISO
RGD
PMID:755797
RGD:11552585
NCBI chr 9:32,157,763...32,225,116
Ensembl chr 9:32,967,993...33,035,177
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ACO2
aconitase 2
ISO
RGD
PMID:755797
RGD:11552585
NCBI chr22:22,363,178...22,423,041
Ensembl chr22:40,450,276...40,510,200
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ADA
adenosine deaminase
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:74163|PMID:7670465) (MGI:72798|PMID:7731963)
MGI Ensembl
PMID:7670465 PMID:7731963
GO_REF:0000107 MGI:72798 MGI:74163
NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
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ADRB2
adrenoceptor beta 2
ISO
RGD
PMID:8408243
RGD:8548535
NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
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AFP
alpha fetoprotein
ISO
RGD
PMID:16822301
RGD:2292045
NCBI chr 4:50,739,197...50,758,459
Ensembl chr 4:56,571,519...56,590,391
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AHR
aryl hydrocarbon receptor
involved_in
ISO
(MGI:1889403|PMID:10973493), (MGI:72762|PMID:7732381), (MGI:81320|PMID:8692887)
DFLAT
PMID:7732381 PMID:8692887 PMID:10973493
MGI:1889403 MGI:72762 MGI:81320
NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171
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AK2
adenylate kinase 2
ISO
RGD
PMID:5123889
RGD:5490208
NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621
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AK3
adenylate kinase 3
ISO
RGD
PMID:5123889
RGD:5490208
NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900
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AK4
adenylate kinase 4
ISO
RGD
PMID:9813319
RGD:632174
NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230
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ALDH1A1
aldehyde dehydrogenase 1 family member A1
ISO
RGD
PMID:14729401
RGD:1643117
NCBI chr 9:51,737,305...51,916,648
Ensembl chr 9:71,680,890...71,814,085
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ALDH1A2
aldehyde dehydrogenase 1 family member A2
ISO
RGD
PMID:14729401
RGD:1643117
NCBI chr15:36,925,443...37,038,288
Ensembl chr15:55,237,101...55,557,168
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ALDH2
aldehyde dehydrogenase 2 family member
ISO
RGD
PMID:16291827
RGD:2300311
NCBI chr12:109,343,020...109,385,060
Ensembl chr12:112,734,243...112,776,471
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ALDH9A1
aldehyde dehydrogenase 9 family member A1
ISO
RGD
PMID:19150623
RGD:2313411
NCBI chr 1:141,094,261...141,130,613
Ensembl chr 1:144,883,839...144,919,670
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ALDOB
aldolase, fructose-bisphosphate B
ISO
RGD
PMID:8641049
RGD:2313428
NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597
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ANG
angiogenin
ISO
RGD
PMID:2440105
RGD:2325721
NCBI chr14:1,548,693...1,558,528
Ensembl chr14:19,614,950...19,615,393
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ARF6
ADP ribosylation factor 6
acts_upstream_of_or_within
ISO
(MGI:3653957|PMID:16880525)
MGI
PMID:16880525
MGI:3653957
NCBI chr14:30,482,191...30,486,741
Ensembl chr14:48,789,329...48,789,856
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ARG1
arginase 1
ISO
RGD
PMID:8690412
RGD:4144072
NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162
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ASNS
asparagine synthetase (glutamine-hydrolyzing)
ISO
RGD
PMID:237754
RGD:2316008
NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
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ASS1
argininosuccinate synthase 1
ISO
RGD
PMID:9395312 PMID:10473900
RGD:1599266 RGD:4139912
NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036
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ATF2
activating transcription factor 2
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
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ATG7
autophagy related 7
acts_upstream_of_or_within
ISO
(MGI:3587473|PMID:15866887)
MGI
PMID:15866887
MGI:3587473
NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
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ATP5F1B
ATP synthase F1 subunit beta
ISO
RGD
PMID:8420961
RGD:13792579
NCBI chr12:32,264,570...32,272,419
Ensembl chr12:32,519,749...32,527,753
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ATP7A
ATPase copper transporting alpha
ISO
RGD
PMID:25349135
RGD:11341669
NCBI chr X:67,093,675...67,231,318
Ensembl chr X:77,255,312...77,342,756
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BAAT
bile acid-CoA:amino acid N-acyltransferase
ISO
RGD
PMID:7575455
RGD:69770
NCBI chr 9:72,568,002...72,593,179
Ensembl chr 9:100,563,040...100,586,189
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BDH1
3-hydroxybutyrate dehydrogenase 1
ISO
RGD
PMID:2806552
RGD:4105456
NCBI chr 3:194,917,904...194,979,451
Ensembl chr 3:204,797,757...204,863,889
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CAD
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
ISO
RGD
PMID:14160653
RGD:2303538
NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804
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CADM1
cell adhesion molecule 1
ISO
RGD
PMID:17326163
RGD:2289097
NCBI chr11:110,008,314...110,347,876
Ensembl chr11:113,950,291...114,280,324
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CAST
calpastatin
ISO
RGD
PMID:16871587
RGD:5683869
NCBI chr 5:91,972,572...92,084,657
Ensembl chr 5:97,527,071...97,636,650
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CCND1
cyclin D1
ISO
RGD
PMID:15809057
RGD:1582338
NCBI chr11:64,737,006...64,750,353
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CCND2
cyclin D2
ISO
RGD
PMID:15809057
RGD:1582338
NCBI chr12:4,385,957...4,417,602
Ensembl chr12:4,309,272...4,335,551
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CCNE1
cyclin E1
ISO
RGD
PMID:15809057
RGD:1582338
NCBI chr19:26,739,285...26,751,630
Ensembl chr19:35,496,700...35,510,295
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CD2AP
CD2 associated protein
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:6873848|PMID:29729186)
MGI Ensembl
PMID:29729186
GO_REF:0000107 MGI:6873848
NCBI chr 6:47,065,284...47,210,746
Ensembl chr 6:48,328,863...48,474,163
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CDK5RAP3
CDK5 regulatory subunit associated protein 3
involved_in
ISO
(MGI:6284072|PMID:30635284)
UniProt
PMID:30635284
MGI:6284072
NCBI chr17:9,556,313...9,567,099
Ensembl chr17:9,738,141...9,749,302
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CDKN2B
cyclin dependent kinase inhibitor 2B
ISO
RGD
PMID:11042273
RGD:7248763
NCBI chr 9:21,838,902...21,845,355
Ensembl chr 9:22,455,662...22,462,156
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CEBPA
CCAAT enhancer binding protein alpha
acts_upstream_of_or_within involved_in
ISO
(MGI:3688957|PMID:17021047) (MGI:83240|PMID:8798745)
RGD MGI UniProt
PMID:8798745 PMID:16172914 PMID:17021047
MGI:3688957 MGI:83240 RGD:1625368
NCBI chr19:30,223,567...30,226,204
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CEBPB
CCAAT enhancer binding protein beta
ISO
RGD
PMID:1377818
RGD:69946
NCBI chr20:46,533,163...46,535,282
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CEBPG
CCAAT enhancer binding protein gamma
involved_in
ISO
PMID:1377818
UniProt
PMID:1377818
RGD:69946
NCBI chr19:30,295,603...30,304,984
Ensembl chr19:39,046,219...39,046,671
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CFC1B
cryptic, EGF-CFC family member 1B
acts_upstream_of_or_within
ISO
(MGI:1346729|PMID:10521397)
MGI
PMID:10521397
MGI:1346729
NCBI chr2B:29,354,004...29,362,161
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CIT
citron rho-interacting serine/threonine kinase
ISO
RGD
PMID:12411428
RGD:628497
NCBI chr12:117,264,627...117,456,069
Ensembl chr12:120,641,747...120,832,511
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CITED2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2
acts_upstream_of_or_within involved_in
ISO
(MGI:3847632|PMID:17644732) (MGI:3813432|PMID:17932483)
MGI BHF-UCL
PMID:17644732 PMID:17932483
MGI:3813432 MGI:3847632
NCBI chr 6:137,134,142...137,136,550
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COBL
cordon-bleu WH2 repeat protein
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 7:51,652,318...51,952,256
Ensembl chr 7:51,895,807...52,097,841
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CP
ceruloplasmin
ISO
RGD
PMID:2332446
RGD:728241
NCBI chr 3:146,180,527...146,239,833
Ensembl chr 3:153,764,830...153,817,544
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CPS1
carbamoyl-phosphate synthase 1
ISO
RGD
PMID:8690412
RGD:4144072
NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728
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CTNNB1
catenin beta 1
ISO
RGD
PMID:17236583
RGD:1599633
NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
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CYP1A1
cytochrome P450 family 1 subfamily A member 1
ISO
RGD
PMID:12162855
RGD:727721
NCBI chr15:53,664,968...53,672,277
Ensembl chr15:73,284,566...73,290,636
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DBP
D-box binding PAR bZIP transcription factor
ISO
RGD
PMID:2331750
RGD:727680
NCBI chr19:45,631,939...45,638,962
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DDX39B
DExD-box helicase 39B
ISO
RGD
PMID:1618789
RGD:632224
NCBI chr 6:31,191,333...31,203,246
Ensembl chr 6:32,081,210...32,092,569
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DUT
deoxyuridine triphosphatase
ISO
RGD
PMID:11121581
RGD:5133681
NCBI chr15:27,280,025...27,292,003
Ensembl chr15:45,603,807...45,616,022
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EGFR
epidermal growth factor receptor
ISO
RGD
PMID:12454858
RGD:2289959
NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
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ELK1
ETS transcription factor ELK1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:6472092|PMID:31877385)
MGI Ensembl
PMID:31877385
GO_REF:0000107 MGI:6472092
NCBI chr X:40,071,433...40,086,518
Ensembl chr X:47,967,492...47,982,579
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ENPP1
ectonucleotide pyrophosphatase/phosphodiesterase 1
ISO
RGD
PMID:10231554
RGD:13204733
NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644
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EPHX1
epoxide hydrolase 1
ISO
RGD
PMID:2469391
RGD:4889418
NCBI chr 1:201,271,366...201,306,635
Ensembl chr 1:206,272,866...206,307,581
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ERBB2
erb-b2 receptor tyrosine kinase 2
ISO
RGD
PMID:12454858
RGD:2289959
NCBI chr17:17,560,337...17,600,808
Ensembl chr17:17,777,434...17,805,862
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ERRFI1
ERBB receptor feedback inhibitor 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5447601|PMID:22912762) (MGI:6282138|PMID:28053990)
MGI Ensembl
PMID:22912762 PMID:28053990
GO_REF:0000107 MGI:5447601 MGI:6282138
NCBI chr 1:6,771,619...6,786,217
Ensembl chr 1:8,011,848...8,033,674
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FOXM1
forkhead box M1
acts_upstream_of_or_within
ISO
(MGI:3522012|PMID:15531365)
MGI
PMID:15531365
MGI:3522012
NCBI chr12:2,978,400...2,999,077
Ensembl chr12:2,910,028...2,930,503
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FPGS
folylpolyglutamate synthase
ISO
RGD
PMID:1435744
RGD:2315102
NCBI chr 9:98,921,986...98,933,542
Ensembl chr 9:127,593,592...127,604,200
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FSCN1
fascin actin-bundling protein 1
ISO
RGD
PMID:18855019
RGD:2317768
NCBI chr 7:5,848,902...5,862,756
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GATA6
GATA binding protein 6
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3575862|PMID:15767668)
MGI Ensembl
PMID:15767668
GO_REF:0000107 MGI:3575862
NCBI chr18:15,411,764...15,444,402
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GFER
growth factor, augmenter of liver regeneration
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr16:716,640...720,196
Ensembl chr16:2,073,064...2,076,592
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GNPNAT1
glucosamine-phosphate N-acetyltransferase 1
ISO
RGD
PMID:3996734
RGD:2302171
NCBI chr14:33,371,603...33,388,098
Ensembl chr14:51,655,182...51,671,619
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HES1
hes family bHLH transcription factor 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3525024|PMID:15578515)
MGI Ensembl
PMID:15578515
GO_REF:0000107 MGI:3525024
NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
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HGF
hepatocyte growth factor
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3653957|PMID:16880525)
MGI Ensembl
PMID:16880525
GO_REF:0000107 MGI:3653957
NCBI chr 7:73,667,618...73,738,960
Ensembl chr 7:87,327,798...87,397,811
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HHEX
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
(MGI:1855906|PMID:10804184), (MGI:3703395|PMID:16364283) (MGI:3487182|PMID:15459110) (MGI:1891782|PMID:11027604)
MGI
PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283
MGI:1855906 MGI:1891782 MGI:3487182 MGI:3703395
NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992
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HLX
H2.0 like homeobox
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:79044|PMID:8557196)
MGI Ensembl
PMID:8557196
GO_REF:0000107 MGI:79044
NCBI chr 1:196,465,704...196,471,803
Ensembl chr 1:201,500,470...201,506,222
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HMBS
hydroxymethylbilane synthase
ISO
RGD
PMID:971328
RGD:25394583
NCBI chr11:113,923,004...113,931,732
Ensembl chr11:117,852,295...117,860,757
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HMGCL
3-hydroxy-3-methylglutaryl-CoA lyase
ISO
RGD
PMID:13990
RGD:2326149
NCBI chr 1:22,993,489...23,017,307
Ensembl chr 1:23,977,723...24,001,150
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HMGCS1
3-hydroxy-3-methylglutaryl-CoA synthase 1
ISO
RGD
PMID:5166591
RGD:2326169
NCBI chr 5:67,067,001...67,091,786
Ensembl chr 5:72,116,228...72,141,050
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HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2
ISO
RGD
PMID:8620869
RGD:2326125
NCBI chr 1:82,778,489...82,798,987
Ensembl chr 1:117,775,770...117,796,679
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HNF1A
HNF1 homeobox A
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:1202489|PMID:9566924)
MGI InterPro Ensembl
PMID:9566924
GO_REF:0000002 GO_REF:0000107 MGI:1202489
NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911
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HNF1B
HNF1 homeobox B
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3807614|PMID:18635606)
MGI InterPro Ensembl
PMID:18635606
GO_REF:0000002 GO_REF:0000107 MGI:3807614
NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
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HNRNPD
heterogeneous nuclear ribonucleoprotein D
ISO
RGD
PMID:20102719
RGD:10042969
NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
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HNRNPK
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:16488668
RGD:10002779
NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756
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HRAS
HRas proto-oncogene, GTPase
ISO
RGD
PMID:2581126
RGD:14694813
NCBI chr11:537,488...540,810
Ensembl chr11:568,305...571,078
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ICMT
isoprenylcysteine carboxyl methyltransferase
acts_upstream_of_or_within
ISO
(MGI:2182507|PMID:12105862)
MGI
PMID:12105862
MGI:2182507
NCBI chr 1:4,987,384...5,002,213
Ensembl chr 1:6,246,570...6,258,746
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IFT88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
(MGI:2155922|PMID:11773599), (MGI:892192|PMID:9176412)
MGI
PMID:9176412 PMID:11773599
MGI:2155922 MGI:892192
NCBI chr13:1,893,102...2,017,771
Ensembl chr13:20,206,471...20,331,204
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IGF2R
insulin like growth factor 2 receptor
ISO
RGD
PMID:12127995
RGD:2311626
NCBI chr 6:157,852,565...157,990,049
Ensembl chr 6:162,878,661...162,997,762
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INSR
insulin receptor
ISO
RGD
PMID:6364984
RGD:14701029
NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
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JARID2
jumonji and AT-rich interaction domain containing 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:1096257|PMID:9376320)
MGI Ensembl
PMID:9376320
GO_REF:0000107 MGI:1096257
NCBI chr 6:15,100,415...15,376,505
Ensembl chr 6:15,466,050...15,739,170
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JUN
Jun proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(MGI:1338596|PMID:10352021)
MGI
PMID:10352021
MGI:1338596
NCBI chr 1:58,042,794...58,045,536
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KLF1
KLF transcription factor 1
acts_upstream_of_or_within
ISO
(MGI:73364|PMID:7753194)
MGI
PMID:7753194
MGI:73364
NCBI chr19:12,446,130...12,449,238
Ensembl chr19:13,188,652...13,191,425
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KRAS
KRAS proto-oncogene, GTPase
ISO
RGD
PMID:1526114
RGD:11060153
NCBI chr12:61,062,689...61,108,524
Ensembl chr12:63,679,293...63,724,335
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LBP
lipopolysaccharide binding protein
ISO
RGD
PMID:20978830
RGD:9685195
NCBI chr20:34,670,128...34,703,046
Ensembl chr20:35,780,768...35,813,188
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LDHA
lactate dehydrogenase A
ISO
RGD
PMID:6849973
RGD:1600284
NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400
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LIPA
lipase A, lysosomal acid type
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5576805|PMID:24370824), (MGI:5702564|PMID:25147230)
MGI Ensembl
PMID:24370824 PMID:25147230
GO_REF:0000107 MGI:5576805 MGI:5702564
NCBI chr10:85,938,240...85,976,610
Ensembl chr10:89,477,082...89,516,874
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LIPC
lipase C, hepatic type
ISO
RGD
PMID:11004003
RGD:2307448
NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
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LOC100972297
nuclear pore complex-interacting protein family member B6
acts_upstream_of_or_within
ISO
(MGI:5441703|PMID:21685914)
MGI
PMID:21685914
MGI:5441703
NCBI chr16:604,927...1,697,831
G
LOC100976982
solute carrier organic anion transporter family member 1B3
ISO
RGD
PMID:15288467
RGD:2303131
NCBI chr12:65,386,042...65,492,240
G
LOC100981854
cyclic AMP-dependent transcription factor ATF-7
involved_in
ISO
(MGI:3719954|PMID:17699753)
MGI
PMID:17699753
MGI:3719954
NCBI chr12:35,128,031...35,245,505
Ensembl chr12:35,914,378...36,021,141
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LOC100989105
signal transducer and activator of transcription 5B
ISO
RGD
PMID:17565389
RGD:2291935
NCBI chr17:15,040,303...15,116,682
Ensembl chr17:15,306,418...15,336,463
G
LSR
lipolysis stimulated lipoprotein receptor
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:32,195,036...32,214,300
Ensembl chr19:40,932,180...40,951,448
G
MAN2A1
mannosidase alpha class 2A member 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3652665|PMID:16754854)
MGI Ensembl
PMID:16754854
GO_REF:0000107 MGI:3652665
NCBI chr 5:105,034,104...105,219,011
Ensembl chr 5:110,841,349...111,025,187
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MED1
mediator complex subunit 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:2682174|PMID:14500757)
MGI Ensembl
PMID:14500757
GO_REF:0000107 MGI:2682174
NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
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MET
MET proto-oncogene, receptor tyrosine kinase
acts_upstream_of_or_within
ISO
(MGI:76093|PMID:7651534)
RGD MGI
PMID:7651534 PMID:8506951
MGI:76093 RGD:2317549
NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159
G
MPST
mercaptopyruvate sulfurtransferase
ISO
RGD
PMID:6573924
RGD:9685558
NCBI chr22:17,933,995...17,944,196
Ensembl chr22:35,770,209...35,780,250
G
MRTFB
myocardin related transcription factor B
acts_upstream_of_or_within
ISO
(MGI:3695837|PMID:17183527)
MGI
PMID:17183527
MGI:3695837
NCBI chr16:12,999,165...13,195,012
Ensembl chr16:14,493,351...14,613,860
G
MST1R
macrophage stimulating 1 receptor
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr 3:49,818,538...49,835,713
Ensembl chr 3:51,054,795...51,072,401
G
NAGLU
N-acetyl-alpha-glucosaminidase
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:4412159|PMID:19632871)
MGI Ensembl
PMID:19632871
GO_REF:0000107 MGI:4412159
NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
G
NAT1
N-acetyltransferase 1
ISO
RGD
PMID:18799802
RGD:2303764
NCBI chr 8:17,425,852...17,439,684
Ensembl chr 8:14,386,481...14,392,462
G
NF1
neurofibromin 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:66069|PMID:7926784)
MGI Ensembl
PMID:7926784
GO_REF:0000107 MGI:66069
NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295
G
NODAL
nodal growth differentiation factor
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:2155575|PMID:11311163)
MGI Ensembl
PMID:11311163
GO_REF:0000107 MGI:2155575
NCBI chr10:66,906,866...66,916,938
Ensembl chr10:69,433,959...69,443,972
G
NOTCH1
notch receptor 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3045664|PMID:15226394)
MGI Ensembl
PMID:15226394
GO_REF:0000107 MGI:3045664
NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
G
NOTCH2
notch receptor 2
acts_upstream_of_or_within
ISO
(MGI:5616947|PMID:25446530)
MGI
PMID:25446530
MGI:5616947
NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
G
NPC1
NPC intracellular cholesterol transporter 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:4947909|PMID:21289032)
MGI Ensembl
PMID:21289032
GO_REF:0000107 MGI:4947909
NCBI chr18:16,783,096...16,838,301
Ensembl chr18:20,409,040...20,463,623
G
NR1H3
nuclear receptor subfamily 1 group H member 3
ISO
RGD
PMID:17341476
RGD:401827282
NCBI chr11:47,195,122...47,215,277
Ensembl chr11:47,748,353...47,768,672
G
NTS
neurotensin
ISO
RGD
PMID:8342998
RGD:9743870
NCBI chr12:83,402,313...83,410,356
Ensembl chr12:86,640,720...86,648,745
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ONECUT1
one cut homeobox 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3763866|PMID:17936262)
MGI Ensembl
PMID:17936262
GO_REF:0000107 MGI:3763866
NCBI chr15:31,694,830...31,727,644
Ensembl chr15:50,016,010...50,053,062
G
ONECUT2
one cut homeobox 2
acts_upstream_of_or_within
ISO
(MGI:3763866|PMID:17936262)
MGI
PMID:17936262
MGI:3763866
NCBI chr18:50,826,110...50,882,127
G
OTC
ornithine transcarbamylase
ISO
RGD
PMID:8690412
RGD:4144072
NCBI chr X:30,796,828...30,868,144
Ensembl chr X:38,505,232...38,575,819
G
PCSK9
proprotein convertase subtilisin/kexin type 9
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:54,323,036...54,355,397
Ensembl chr 1:55,911,016...55,936,456
G
PDX1
pancreatic and duodenal homeobox 1
acts_upstream_of_or_within
ISO
(MGI:4355651|PMID:19619492)
MGI
PMID:19619492
MGI:4355651
NCBI chr13:9,199,572...9,206,202
G
PIK3CA
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5582991|PMID:24691033)
MGI Ensembl
PMID:24691033
GO_REF:0000107 MGI:5582991
NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977
G
PKD2
polycystin 2, transient receptor potential cation channel
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5441703|PMID:21685914)
MGI Ensembl
PMID:21685914
GO_REF:0000107 MGI:5441703
NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
G
PKM
pyruvate kinase M1/2
ISO
RGD
PMID:7327170
RGD:2303137
NCBI chr15:51,149,584...51,182,193
Ensembl chr15:69,913,455...69,945,832
G
PRKCSH
PRKCSH beta subunit of glucosidase II
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5441703|PMID:21685914)
MGI TreeGrafter Ensembl
PMID:21685914
GO_REF:0000107 GO_REF:0000118 MGI:5441703
NCBI chr19:10,981,398...10,997,062
Ensembl chr19:11,693,620...11,707,728
G
PROC
protein C, inactivator of coagulation factors Va and VIIIa
acts_upstream_of_or_within
ISO
(MGI:1306904|PMID:9788960)
RGD MGI
PMID:7660357 PMID:9788960
MGI:1306904 RGD:1299299
NCBI chr2B:32,846,899...32,859,060
Ensembl chr2B:128,083,794...128,094,625
G
PROS1
protein S
ISO
RGD
PMID:7660357
RGD:1299299
NCBI chr 3:90,934,641...91,039,059
Ensembl chr 3:97,615,734...97,718,756
G
PROX1
prospero homeobox 1
involved_in
ISO IEA
RGD Ensembl
PMID:16770575
GO_REF:0000107 RGD:5133274
NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
G
PSMB9
proteasome 20S subunit beta 9
ISO
RGD
PMID:24707720
RGD:9854625
NCBI chr 6:32,423,614...32,429,062
Ensembl chr 6:33,539,060...33,564,402
G
PTCD2
pentatricopeptide repeat domain 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3829520|PMID:18729827)
MGI Ensembl
PMID:18729827
GO_REF:0000107 MGI:3829520
NCBI chr 5:42,953,639...42,992,301
Ensembl chr 5:43,552,528...43,591,162
G
PTN
pleiotrophin
ISO
RGD
PMID:12057922
RGD:727382
NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
G
QDPR
quinoid dihydropteridine reductase
ISO
RGD
PMID:710385
RGD:5128606
NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667
G
RARA
retinoic acid receptor alpha
ISO
RGD
PMID:15388488
RGD:2314298
NCBI chr17:16,932,485...16,980,958
G
RB1CC1
RB1 inducible coiled-coil 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3689241|PMID:17015619)
MGI Ensembl
PMID:17015619
GO_REF:0000107 MGI:3689241
NCBI chr 8:49,046,830...49,138,795
Ensembl chr 8:46,430,131...46,521,722
G
RELA
RELA proto-oncogene, NF-kB subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
G
RGN
regucalcin
ISO
RGD
PMID:8794449 PMID:9546611
RGD:9590173 RGD:9590212
NCBI chr X:39,513,135...39,530,188
Ensembl chr X:47,371,226...47,388,881
G
RHBDD3
rhomboid domain containing 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5492204|PMID:23610400)
MGI Ensembl
PMID:23610400
GO_REF:0000107 MGI:5492204
NCBI chr22:10,315,438...10,323,803
Ensembl chr22:28,123,115...28,131,090
G
RPGRIP1L
RPGRIP1 like
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3716248|PMID:17558409)
MGI Ensembl
PMID:17558409
GO_REF:0000107 MGI:3716248
NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174
G
RXRA
retinoid X receptor alpha
ISO
RGD
PMID:14729401
RGD:1643117
NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704
G
SEC63
SEC63 homolog, protein translocation regulator
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5441703|PMID:21685914)
MGI Ensembl
PMID:21685914
GO_REF:0000107 MGI:5441703
NCBI chr 6:105,673,265...105,757,422
Ensembl chr 6:109,538,184...109,595,518
G
SLC25A4
solute carrier family 25 member 4
ISO
RGD
PMID:9468308
RGD:9681468
NCBI chr 4:177,310,982...177,315,016
Ensembl chr 4:189,531,914...189,534,549
G
SLCO2B1
solute carrier organic anion transporter family member 2B1
ISO
RGD
PMID:15345472
RGD:2316987
NCBI chr11:70,211,124...70,266,513
Ensembl chr11:73,515,433...73,570,410
G
SMAD3
SMAD family member 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3618021|PMID:15183723)
MGI Ensembl
PMID:15183723
GO_REF:0000107 MGI:3618021
NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185
G
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
acts_upstream_of_or_within
ISO
(MGI:3610843|PMID:16287714)
MGI
PMID:16287714
MGI:3610843
NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
G
SOD2
superoxide dismutase 2
acts_upstream_of_or_within
ISO
(MGI:3718142|PMID:17367743)
MGI
PMID:17367743
MGI:3718142
NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
G
SP1
Sp1 transcription factor
acts_upstream_of_or_within
ISO
(MGI:3717030|PMID:17584888)
MGI
PMID:17584888
MGI:3717030
NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356
G
SP3
Sp3 transcription factor
acts_upstream_of_or_within
ISO
(MGI:3717030|PMID:17584888)
MGI
PMID:17584888
MGI:3717030
NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848
G
SRD5A1
steroid 5 alpha-reductase 1
ISO
RGD
PMID:8770891
RGD:4892048
NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264
G
SRSF5
serine and arginine rich splicing factor 5
ISO
RGD
PMID:9199345
RGD:11039429
NCBI chr14:50,320,820...50,365,650
Ensembl chr14:69,230,730...69,236,596
G
TAF10
TATA-box binding protein associated factor 10
acts_upstream_of_or_within
ISO
(MGI:3806427|PMID:18722179)
MGI
PMID:18722179
MGI:3806427
NCBI chr11:6,742,862...6,744,260
G
TGFBR3
transforming growth factor beta receptor 3
involved_in
ISO
(MGI:2663364|PMID:12773577)
BHF-UCL
PMID:12773577
MGI:2663364
NCBI chr 1:94,337,275...94,539,229
Ensembl chr 1:93,080,452...93,285,587
G
THRA
thyroid hormone receptor alpha
ISO
RGD
PMID:17496154
RGD:2314319
NCBI chr17:17,196,459...17,226,263
G
TK1
thymidine kinase 1
ISO
RGD
PMID:995499
RGD:2317236
NCBI chr17:72,251,416...72,265,308
Ensembl chr17:77,803,749...77,816,747
G
UPB1
beta-ureidopropionase 1
ISO
RGD
PMID:6870258
RGD:2317093
NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360
G
UPF2
UPF2 regulator of nonsense mediated mRNA decay
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:4821037|PMID:20657840)
MGI Ensembl
PMID:20657840
GO_REF:0000107 MGI:4821037
NCBI chr10:11,924,483...12,047,617
Ensembl chr10:11,916,893...12,020,760
G
UROD
uroporphyrinogen decarboxylase
ISO
RGD
PMID:6219675
RGD:4145103
NCBI chr 1:44,315,912...44,319,356
Ensembl chr 1:45,679,744...45,683,185
G
VWF
von Willebrand factor
acts_upstream_of_or_within
ISO
(MGI:70957|PMID:7854452)
MGI
PMID:7854452
MGI:70957
NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
G
WNT4
Wnt family member 4
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
G
XBP1
X-box binding protein 1
involved_in
ISO
(MGI:1352298|PMID:10652269)
UniProt
PMID:10652269
MGI:1352298
NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
G
ZFYVE9
zinc finger FYVE-type containing 9
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr 1:51,395,692...51,604,190
Ensembl chr 1:53,090,518...53,212,116
G
ZMPSTE24
zinc metallopeptidase STE24
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5609934|PMID:23117660)
MGI Ensembl
PMID:23117660
GO_REF:0000107 MGI:5609934
NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747
G
CCDC39
coiled-coil domain 39 molecular ruler complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 3:177,640,127...177,705,885
Ensembl chr 3:185,813,245...185,878,362
G
CCDC40
coiled-coil domain 40 molecular ruler complex subunit
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr17:74,120,483...74,187,323
Ensembl chr17:79,656,287...79,722,565
G
DNAAF1
dynein axonemal assembly factor 1
involved_in
ISO
(PMID:19944405)
BHF-UCL
PMID:19944405
NCBI chr16:64,810,498...64,843,705
Ensembl chr16:84,154,130...84,184,914
G
NPHP3
nephrocystin 3
involved_in
ISO
(PMID:20007846)
BHF-UCL
PMID:20007846
NCBI chr 3:129,753,399...129,795,300
G
PKD2
polycystin 2, transient receptor potential cation channel
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
G
ZIC3
Zic family member 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr X:126,691,534...126,705,788
Ensembl chr X:136,954,024...136,967,819
G
GGT1
gamma-glutamyltransferase 1
ISO
RGD
PMID:10934156
RGD:14701049
NCBI chr22:5,424,334...5,469,705
G
HHEX
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
(MGI:3720549|PMID:17580084)
MGI
PMID:17580084
MGI:3720549
NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992
G
HNF1B
HNF1 homeobox B
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3807614|PMID:18635606)
MGI Ensembl
PMID:18635606
GO_REF:0000107 MGI:3807614
NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
G
TBX3
T-box transcription factor 3
acts_upstream_of involved_in
ISO IEA
(MGI:3788969|PMID:18356246)
MGI Ensembl
PMID:18356246
GO_REF:0000107 MGI:3788969
NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316
G
ANXA1
annexin A1
involved_in
ISO IEA
RGD TreeGrafter
PMID:11668598
GO_REF:0000118 RGD:2306909
NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779
G
CPS1
carbamoyl-phosphate synthase 1
ISO
RGD
PMID:12939595
RGD:4144098
NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728
G
CYP1A1
cytochrome P450 family 1 subfamily A member 1
ISO
RGD
PMID:17574236
RGD:2306655
NCBI chr15:53,664,968...53,672,277
Ensembl chr15:73,284,566...73,290,636
G
E2F7
E2F transcription factor 7
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr12:74,540,049...74,582,561
Ensembl chr12:77,388,950...77,433,262
G
E2F8
E2F transcription factor 8
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:19,250,045...19,267,629
Ensembl chr11:19,162,837...19,179,744
G
FOXH1
forkhead box H1
ISO
RGD
PMID:22715131
RGD:155791677
NCBI chr 8:141,240,691...141,244,381
Ensembl chr 8:144,225,933...144,232,736
G
FRZB
frizzled related protein
acts_upstream_of involved_in
ISO IEA
(MGI:4356222|PMID:19562671)
MGI Ensembl
PMID:19562671
GO_REF:0000107 MGI:4356222
NCBI chr2B:70,106,378...70,139,333
Ensembl chr2B:187,915,579...187,948,855
G
GGT1
gamma-glutamyltransferase 1
ISO
RGD
PMID:10934156
RGD:14701049
NCBI chr22:5,424,334...5,469,705
G
HHEX
hematopoietically expressed homeobox
acts_upstream_of_or_within
ISO
(MGI:1891782|PMID:11027604)
MGI
PMID:11027604
MGI:1891782
NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992
G
HNF1B
HNF1 homeobox B
ISO
RGD
PMID:18286537
RGD:2312718
NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863
G
HNF4A
hepatocyte nuclear factor 4 alpha
ISO
RGD
PMID:19621519
RGD:12904750
NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536
G
ITGA2
integrin subunit alpha 2
ISO
RGD
PMID:16458388
RGD:2307397
NCBI chr 5:60,935,452...61,040,726
Ensembl chr 5:62,555,370...62,659,720
G
KRT18
keratin 18
ISO
RGD
PMID:24340101 PMID:28941653
RGD:27226712 RGD:27226713
NCBI chr12:35,807,660...35,811,691
Ensembl chr12:36,587,149...36,591,196
G
PCK1
phosphoenolpyruvate carboxykinase 1
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920
G
PCK2
phosphoenolpyruvate carboxykinase 2, mitochondrial
involved_in
IEA
TreeGrafter
GO_REF:0000118
NCBI chr14:4,872,276...4,882,118
Ensembl chr14:22,996,813...23,006,775
G
PROX1
prospero homeobox 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
G
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3610866|PMID:16138077)
MGI Ensembl
PMID:16138077
GO_REF:0000107 MGI:3610866
NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921
G
TAF10
TATA-box binding protein associated factor 10
acts_upstream_of_or_within
ISO
(MGI:3806427|PMID:18722179)
MGI
PMID:18722179
MGI:3806427
NCBI chr11:6,742,862...6,744,260
G
WNT1
Wnt family member 1
ISO
RGD
PMID:20413689
RGD:2326223
NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
G
CEBPB
CCAAT enhancer binding protein beta
involved_in
ISO
PMID:10635333 (MGI:3778721|PMID:10635333)
UniProt
PMID:10635333
MGI:3778721 RGD:10047310
NCBI chr20:46,533,163...46,535,282
G
FGL1
fibrinogen like 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 8:17,083,524...17,128,152
Ensembl chr 8:14,035,855...14,066,956
G
IL6
interleukin 6
involved_in
ISO
(MGI:84432|PMID:8910279)
UniProt
PMID:8910279
MGI:84432
NCBI chr 7:23,415,922...23,420,767
G
MKI67
marker of proliferation Ki-67
acts_upstream_of_or_within
ISO
(MGI:5616947|PMID:25446530)
MGI
PMID:25446530
MGI:5616947
NCBI chr10:124,684,336...124,714,143
Ensembl chr10:128,936,037...128,962,555
G
NOTCH2
notch receptor 2
acts_upstream_of_or_within
ISO
(MGI:5616947|PMID:25446530)
MGI
PMID:25446530
MGI:5616947
NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
G
NR1H4
nuclear receptor subfamily 1 group H member 4
ISO
RGD
PMID:29138817
RGD:15042871
NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
G
PROX1
prospero homeobox 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:1860507|PMID:10888866)
MGI Ensembl
PMID:10888866
GO_REF:0000107 MGI:1860507
NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
G
RPS6KA1
ribosomal protein S6 kinase A1
involved_in
ISO
(MGI:3778721|PMID:10635333)
UniProt
PMID:10635333
MGI:3778721
NCBI chr 1:25,792,428...25,837,950
Ensembl chr 1:26,856,057...26,900,532
G
TGFA
transforming growth factor alpha
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr2A:70,510,727...70,617,628
Ensembl chr2A:71,625,196...71,731,461
G
GAK
cyclin G associated kinase
acts_upstream_of_or_within
ISO
(MGI:5305417|PMID:18434600)
MGI
PMID:18434600
MGI:5305417
NCBI chr 4:952,474...1,049,612
Ensembl chr 4:883,096...967,473
G
NOTCH2
notch receptor 2
acts_upstream_of_or_within
ISO
(MGI:5616947|PMID:25446530)
MGI
PMID:25446530
MGI:5616947
NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
G
SOX9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(MGI:3852603|PMID:19403103)
MGI
PMID:19403103
MGI:3852603
NCBI chr17:66,028,737...66,034,122
G
CUL3
cullin 3
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:3713609|PMID:17339333)
MGI Ensembl
PMID:17339333
GO_REF:0000107 MGI:3713609
NCBI chr2B:111,714,533...111,827,080
Ensembl chr2B:230,289,195...230,378,991
G
LIPA
lipase A, lysosomal acid type
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5576805|PMID:24370824)
MGI Ensembl
PMID:24370824
GO_REF:0000107 MGI:5576805
NCBI chr10:85,938,240...85,976,610
Ensembl chr10:89,477,082...89,516,874
G
NOTCH2
notch receptor 2
acts_upstream_of_or_within
ISO
(MGI:5616947|PMID:25446530)
MGI
PMID:25446530
MGI:5616947
NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
G
TET2
tet methylcytosine dioxygenase 2
acts_upstream_of_or_within
ISO
(MGI:5298314|PMID:21803851)
MGI
PMID:21803851
MGI:5298314
NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400
G
ADRB2
adrenoceptor beta 2
ISO
RGD
PMID:8855951
RGD:8548508
NCBI chr 5:144,259,756...144,398,421
Ensembl chr 5:150,267,554...150,315,892
G
AFP
alpha fetoprotein
ISO
RGD
PMID:2460696
RGD:126848734
NCBI chr 4:50,739,197...50,758,459
Ensembl chr 4:56,571,519...56,590,391
G
ALAS2
5'-aminolevulinate synthase 2
ISO
RGD
PMID:6895999
RGD:11035238
NCBI chr X:47,219,588...47,241,592
Ensembl chr X:55,451,794...55,473,680
G
ANGPT1
angiopoietin 1
ISO
RGD
PMID:11549276
RGD:704403
NCBI chr 8:103,893,234...104,137,661
Ensembl chr 8:106,042,041...106,286,783
G
ATP2A3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
ISO
RGD
PMID:11032760
RGD:13782137
NCBI chr17:3,992,088...4,013,998
Ensembl chr17:3,965,925...3,998,382
G
AURKA
aurora kinase A
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:19435814)
MGI Ensembl
PMID:19435814
GO_REF:0000107
NCBI chr20:52,707,757...52,730,579
Ensembl chr20:53,994,881...54,017,339
G
BCL2
BCL2 apoptosis regulator
ISO
RGD
PMID:21503946
RGD:11531107
NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
G
CCND1
cyclin D1
acts_upstream_of_or_within
ISO
(MGI:5515698|PMID:23740243)
MGI
PMID:23740243
MGI:5515698
NCBI chr11:64,737,006...64,750,353
G
CEBPB
CCAAT enhancer binding protein beta
involved_in
ISO
(MGI:1277818|PMID:9727068)
UniProt
PMID:9727068
MGI:1277818
NCBI chr20:46,533,163...46,535,282
G
CFTR
CF transmembrane conductance regulator
ISO
RGD
PMID:1378998
RGD:11567227
NCBI chr 7:109,449,847...109,633,023
Ensembl chr 7:122,129,798...122,327,864
G
CLDN1
claudin 1
ISO
RGD
PMID:15826721
RGD:11344894
NCBI chr 3:187,328,629...187,345,360
Ensembl chr 3:195,882,239...195,899,248
G
CPB2
carboxypeptidase B2
ISO
RGD
PMID:19386599
RGD:7243112
NCBI chr13:26,926,788...26,979,767
G
CPT1A
carnitine palmitoyltransferase 1A
ISO
RGD
PMID:31953200
RGD:25823179
NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481
G
CSNK2A1
casein kinase 2 alpha 1
ISO
RGD
PMID:8573159
RGD:11565141
NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126
G
CSNK2A2
casein kinase 2 alpha 2
ISO
RGD
PMID:8573159
RGD:11565141
NCBI chr16:38,426,399...38,466,575
Ensembl chr16:57,557,270...57,596,218
G
CSNK2B
casein kinase 2 beta
ISO
RGD
PMID:8573159
RGD:11565141
NCBI chr 6:31,327,250...31,331,250
G
EGFR
epidermal growth factor receptor
ISO
RGD
PMID:2401457 PMID:20395437
RGD:10395295 RGD:38599218
NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
G
EZH1
enhancer of zeste 1 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
(MGI:5637451|PMID:25477280)
MGI
PMID:25477280
MGI:5637451
NCBI chr17:14,572,868...14,618,012
Ensembl chr17:14,814,054...14,842,295
G
EZH2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5637451|PMID:25477280)
MGI Ensembl
PMID:25477280
GO_REF:0000107 MGI:5637451
NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726
G
FAS
Fas cell surface death receptor
ISO
RGD
PMID:10632538
RGD:8662889
NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
G
FGA
fibrinogen alpha chain
ISO
RGD
PMID:3817019
RGD:728788
NCBI chr 4:146,949,680...146,957,291
G
FLT1
fms related receptor tyrosine kinase 1
ISO
RGD
PMID:16162160
RGD:10402121
NCBI chr13:9,584,850...9,779,542
G
GFER
growth factor, augmenter of liver regeneration
ISO
RGD
PMID:24880092
RGD:9685725
NCBI chr16:716,640...720,196
Ensembl chr16:2,073,064...2,076,592
G
GGT1
gamma-glutamyltransferase 1
ISO
RGD
PMID:10934156
RGD:14701049
NCBI chr22:5,424,334...5,469,705
G
GLI1
GLI family zinc finger 1
involved_in acts_upstream_of_or_within
ISO IEA
(MGI:5515698|PMID:23740243)
RGD Ensembl MGI
PMID:22024090 PMID:22790641 PMID:23740243
GO_REF:0000107 MGI:5515698 RGD:12832760 RGD:12911223
NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473
G
GLI3
GLI family zinc finger 3
ISO
RGD
PMID:22024090
RGD:12911223
NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865
G
GUCD1
guanylyl cyclase domain containing 1
ISO
RGD
PMID:24743017
RGD:151665336
NCBI chr22:5,346,554...5,362,171
Ensembl chr22:22,212,000...22,227,503
G
HAMP
hepcidin antimicrobial peptide
ISO
RGD
PMID:22364558
RGD:8694419
NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861
G
HFE
homeostatic iron regulator
ISO
RGD
PMID:22364558
RGD:8694419
NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591
G
HMOX1
heme oxygenase 1
ISO
RGD
PMID:24815159
RGD:10755743
NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
G
HSD3B7
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
ISO
RGD
PMID:16081591
RGD:1599972
NCBI chr16:23,979,487...23,984,225
Ensembl chr16:31,352,322...31,356,803
G
IHH
Indian hedgehog signaling molecule
ISO
RGD
PMID:22024090
RGD:12911223
NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506
G
IL10
interleukin 10
ISO
RGD
PMID:11813605
RGD:11049526
NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
G
IL18
interleukin 18
ISO
RGD
PMID:24412291
RGD:14696652
NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
G
IL6
interleukin 6
involved_in
ISO
(MGI:84432|PMID:8910279)
UniProt
PMID:8910279
MGI:84432
NCBI chr 7:23,415,922...23,420,767
G
INSR
insulin receptor
ISO
RGD
PMID:23633480
RGD:9685423
NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
G
ITPR1
inositol 1,4,5-trisphosphate receptor type 1
ISO
RGD
PMID:24814243
RGD:13793384
NCBI chr 3:4,448,574...4,802,545
Ensembl chr 3:4,572,921...4,904,811
G
KLKB1
kallikrein B1
ISO
RGD
PMID:9869390
RGD:7297052
NCBI chr 4:178,398,359...178,429,448
Ensembl chr 4:190,604,901...190,636,300
G
LOC100979953
small ribosomal subunit protein uS19
ISO
RGD
PMID:2829897
RGD:11040696
G
MYC
MYC proto-oncogene, bHLH transcription factor
ISO
RGD
PMID:3335218
RGD:10059623
NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
G
NCL
nucleolin
ISO
RGD
PMID:7490256
RGD:9686389
NCBI chr2B:118,703,148...118,712,893
Ensembl chr2B:237,490,378...237,500,193
G
NFKBIA
NFKB inhibitor alpha
ISO
RGD
PMID:24446557
RGD:150429839
NCBI chr14:16,155,331...16,158,588
G
NPM1
nucleophosmin 1
ISO
RGD
PMID:14635188
RGD:11534994
NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656
G
NR1H4
nuclear receptor subfamily 1 group H member 4
ISO
RGD
PMID:29138817
RGD:15042871
NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
G
PCNA
proliferating cell nuclear antigen
ISO
RGD
PMID:7906221
RGD:10448980
NCBI chr20:5,134,930...5,146,603
Ensembl chr20:4,927,731...4,939,440
G
PNPT1
polyribonucleotide nucleotidyltransferase 1
ISO
RGD
PMID:191106
RGD:11554175
NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
G
POU2F1
POU class 2 homeobox 1
ISO
RGD
PMID:1841628
RGD:9743904
NCBI chr 1:142,653,296...142,860,572
Ensembl chr 1:146,439,581...146,633,921
G
PRMT1
protein arginine methyltransferase 1
ISO
RGD
PMID:15837430
RGD:2299961
NCBI chr19:46,691,795...46,705,179
Ensembl chr19:55,610,938...55,623,135
G
PRMT5
protein arginine methyltransferase 5
ISO
RGD
PMID:15837430
RGD:2299961
NCBI chr14:3,737,741...3,746,646
Ensembl chr14:21,836,984...21,846,018
G
PTCH1
patched 1
ISO
RGD
PMID:22024090
RGD:12911223
NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453
G
PTPN3
protein tyrosine phosphatase non-receptor type 3
ISO
RGD
PMID:7591957
RGD:1599982
NCBI chr 9:80,528,896...80,651,629
Ensembl chr 9:108,699,761...108,787,464
G
RAP1A
RAP1A, member of RAS oncogene family
ISO
RGD
PMID:9015365
RGD:10003155
NCBI chr 1:114,279,255...114,376,977
Ensembl chr 1:125,971,598...125,994,813
G
RAPGEF3
Rap guanine nucleotide exchange factor 3
ISO
RGD
PMID:22227930
RGD:9850085
NCBI chr12:40,974,756...40,999,471
Ensembl chr12:41,848,785...41,873,252
G
RGN
regucalcin
ISO
RGD
PMID:7759556
RGD:9590197
NCBI chr X:39,513,135...39,530,188
Ensembl chr X:47,371,226...47,388,881
G
RPL10
ribosomal protein L10
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr X:143,839,739...143,844,026
G
RPL13
ribosomal protein L13
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr16:70,312,241...70,314,956
G
RPL18
ribosomal protein L18
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr19:45,617,033...45,620,954
Ensembl chr19:54,209,173...54,213,293
G
RPL19
ribosomal protein L19
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr17:18,066,656...18,071,158
Ensembl chr17:18,342,003...18,346,399
G
RPL30
ribosomal protein L30
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr 8:94,678,823...94,682,726
Ensembl chr 8:96,863,944...96,867,526
G
RPL32
ribosomal protein L32
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr 3:12,759,205...12,764,800
Ensembl chr 3:13,103,471...13,109,044
G
RPL7
ribosomal protein L7
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr 8:69,829,356...69,833,184
Ensembl chr 8:71,476,492...71,480,279
G
RPS16
ribosomal protein S16
ISO
RGD
PMID:6121318
RGD:11038709
NCBI chr19:36,531,284...36,534,156
Ensembl chr19:45,079,106...45,085,351
G
RPS24
ribosomal protein S24
ISO
RGD
PMID:7612009
RGD:11041663
NCBI chr10:74,554,301...74,561,240
Ensembl chr10:77,217,228...77,238,519
G
SERPINA10
serpin family A member 10
ISO
RGD
PMID:8670294
RGD:729731
NCBI chr14:74,914,680...74,927,325
Ensembl chr14:94,248,362...94,257,835
G
SHH
sonic hedgehog signaling molecule
ISO
RGD
PMID:22790641
RGD:12832760
NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
G
SLC7A5
solute carrier family 7 member 5
ISO
RGD
PMID:9882595
RGD:151357002
NCBI chr16:68,512,407...68,552,763
G
SRSF1
serine and arginine rich splicing factor 1
ISO
RGD
PMID:23633480
RGD:9685423
NCBI chr17:52,083,676...52,087,454
Ensembl chr17:56,937,295...56,944,425
G
SRSF5
serine and arginine rich splicing factor 5
ISO
RGD
PMID:7686911
RGD:729792
NCBI chr14:50,320,820...50,365,650
Ensembl chr14:69,230,730...69,236,596
G
SULF2
sulfatase 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5515698|PMID:23740243)
MGI Ensembl
PMID:23740243
GO_REF:0000107 MGI:5515698
NCBI chr20:43,992,927...44,122,598
Ensembl chr20:45,074,069...45,173,893
G
TGFB1
transforming growth factor beta 1
ISO
RGD
PMID:25862490
RGD:11073669
NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
G
TNF
tumor necrosis factor
ISO
RGD
PMID:9178702
RGD:14995465
NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
G
TYMS
thymidylate synthetase
ISO
RGD
PMID:2707640
RGD:2317422
NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320
G
UCP2
uncoupling protein 2
ISO
RGD
PMID:19104935
RGD:7204431
NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185
G
VTN
vitronectin
ISO
RGD
PMID:10988248
RGD:10003090
NCBI chr17:28,403,813...28,407,202
Ensembl chr17:28,906,508...28,909,583
G
VWF
von Willebrand factor
ISO
RGD
PMID:12217600
RGD:727737
NCBI chr12:6,073,836...6,249,806
Ensembl chr12:5,990,612...6,165,153
G
WDR35
WD repeat domain 35
ISO
RGD
PMID:18472094
RGD:11553927
NCBI chr2A:19,896,498...19,977,295
Ensembl chr2A:20,014,127...20,093,810
G
FRZB
frizzled related protein
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:4356222|PMID:19562671)
MGI Ensembl
PMID:19562671
GO_REF:0000107 MGI:4356222
NCBI chr2B:70,106,378...70,139,333
Ensembl chr2B:187,915,579...187,948,855
G
CDKN2A
cyclin dependent kinase inhibitor 2A
ISO
RGD
PMID:24190239
RGD:11252157
NCBI chr 9:21,803,862...21,831,322
G
CEACAM1
CEA cell adhesion molecule 1
involved_in
ISO
PMID:15467833 (MGI:3057041|PMID:15467833)
UniProt
PMID:15467833
MGI:3057041 RGD:11059592
NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739
G
CPB2
carboxypeptidase B2
ISO
RGD
PMID:19386599
RGD:7243112
NCBI chr13:26,926,788...26,979,767
G
LIMS1
LIM zinc finger domain containing 1
acts_upstream_of_or_within
ISO
(MGI:5559100|PMID:24058607)
MGI
PMID:24058607
MGI:5559100
NCBI chr2A:94,739,338...94,928,835
G
LIMS2
LIM zinc finger domain containing 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5559100|PMID:24058607)
MGI Ensembl
PMID:24058607
GO_REF:0000107 MGI:5559100
NCBI chr2B:32,594,330...32,637,697
Ensembl chr2B:128,304,799...128,347,951
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SMO
smoothened, frizzled class receptor
ISO
RGD
PMID:22994359
RGD:150521663
NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
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BMP4
bone morphogenetic protein 4
ISO
RGD
PMID:19229878
RGD:8885195
NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
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FOXA3
forkhead box A3
ISO
RGD
PMID:9878541
RGD:2315086
NCBI chr19:42,873,933...42,883,479
Ensembl chr19:51,410,473...51,418,744
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MESP1
mesoderm posterior bHLH transcription factor 1
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr15:68,440,626...68,441,935
Ensembl chr15:87,645,768...87,647,210
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CFLAR
CASP8 and FADD like apoptosis regulator
ISO
RGD
PMID:16033771
RGD:11341689
NCBI chr2B:88,373,057...88,429,959
Ensembl chr2B:206,528,943...206,577,045
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FGF1
fibroblast growth factor 1
involved_in
ISO
PMID:16756958
UniProt
PMID:16756958
RGD:10047366
NCBI chr 5:137,949,100...138,054,553
Ensembl chr 5:144,056,387...144,078,001
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FGF18
fibroblast growth factor 18
involved_in
ISO
PMID:16756958
UniProt
PMID:16756958
RGD:10047366
NCBI chr 5:166,765,061...166,802,277
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HPN
hepsin
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr19:31,985,761...32,012,841
Ensembl chr19:40,725,319...40,750,628
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IL18
interleukin 18
ISO
RGD
PMID:24412291
RGD:14696652
NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
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ITPR1
inositol 1,4,5-trisphosphate receptor type 1
ISO
RGD
PMID:24814243
RGD:13793384
NCBI chr 3:4,448,574...4,802,545
Ensembl chr 3:4,572,921...4,904,811
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MDK
midkine
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr11:46,339,365...46,342,388
Ensembl chr11:46,891,540...46,893,254
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MED1
mediator complex subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
(MGI:3719773|PMID:17438330)
Ensembl MGI
PMID:17438330
GO_REF:0000107 MGI:3719773
NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
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PTN
pleiotrophin
involved_in
ISO IEA
RGD Ensembl
PMID:16226713
GO_REF:0000107 RGD:9834996
NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
G
RTN4
reticulon 4
involved_in
ISO
(MGI:6282933|PMID:23299899)
UniProt
PMID:23299899
MGI:6282933
NCBI chr2A:55,129,272...55,207,031
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TNF
tumor necrosis factor
ISO
with PCB 126 or TCDD
RGD
PMID:9111198 PMID:17557910
RGD:14995469 RGD:14995481
NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
G
TNFAIP3
TNF alpha induced protein 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819
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WNT3A
Wnt family member 3A
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5515698|PMID:23740243)
MGI Ensembl
PMID:23740243
GO_REF:0000107 MGI:5515698
NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
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XBP1
X-box binding protein 1
involved_in
ISO
(MGI:1352298|PMID:10652269)
UniProt
PMID:10652269
MGI:1352298
NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
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GLI1
GLI family zinc finger 1
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5515698|PMID:23740243)
MGI Ensembl
PMID:23740243
GO_REF:0000107 MGI:5515698
NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473
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IFNG
interferon gamma
ISO
RGD
PMID:15799032
RGD:8142374
NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
G
PLAU
plasminogen activator, urokinase
ISO
RGD
PMID:17587687
RGD:6484147
NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
G
SULF2
sulfatase 2
acts_upstream_of_or_within involved_in
ISO IEA
(MGI:5515698|PMID:23740243)
MGI Ensembl
PMID:23740243
GO_REF:0000107 MGI:5515698
NCBI chr20:43,992,927...44,122,598
Ensembl chr20:45,074,069...45,173,893
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