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ONTOLOGY REPORT - ANNOTATIONS


Term:opsonin binding
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Accession:GO:0001846 term browser browse the term
Definition:Binding to an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material.
Comment:Note that an opsonin is a blood serum protein or fragment which when deposited on the surface of a bacteria, virus, immune complex, or other particulate material acts a signal for phagocytosis to cells bearing the appropriate receptors. Not all complement components or fragments and not all antibodies have opsonic properties.



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opsonin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Itgam integrin subunit alpha M enables ISO MGI:3027319 (MGI:3042098|PMID:12163569) RGD PMID:12163569 MGI:3042098 NCBI chr 1:182,659,047...182,709,495
Ensembl chr 1:182,659,000...182,709,503
JBrowse link
G Itgav integrin subunit alpha V contributes_to ISO (MGI:5285150|PMID:20826760) RGD PMID:20826760 MGI:5285150 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
complement component C1q complex binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum enables IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:23544079)
Ensembl
RGD
PMID:23544079 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:85,373,338...85,374,134
Ensembl chr13:85,373,220...85,374,298
JBrowse link
G C1qbp complement C1q binding protein enables IDA
IBA
ISO
human C1q
PMID:21873635
(PMID:8195709)
RGD PMID:8195709 PMID:9414106 PMID:21873635 RGD:69785, RGD:13792537 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G C4a complement C4A enables ISO (PMID:2395880) RGD PMID:2395880 NCBI chr20:4,005,731...4,020,083
Ensembl chr20:4,005,731...4,020,080
JBrowse link
G C4b complement C4B (Chido blood group) enables ISO (PMID:2395880) RGD PMID:2395880 NCBI chr20:4,197,371...4,211,684
Ensembl chr20:4,197,366...4,211,681
JBrowse link
G Cd93 CD93 molecule enables ISO (PMID:11781389) RGD PMID:11781389 NCBI chr 3:135,891,859...135,898,378
Ensembl chr 3:135,891,859...135,898,378
JBrowse link
G Crp C-reactive protein enables ISO
IBA
(PMID:23544079)
PMID:21873635
RGD PMID:23544079 PMID:21873635 RGD:13792537 NCBI chr13:85,131,635...85,175,179
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Megf10 multiple EGF-like domains 10 enables ISO (PMID:27170117) RGD PMID:27170117 NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
JBrowse link
G Mptx1 mucosal pentraxin 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:85,728,076...85,731,469
Ensembl chr13:85,728,076...85,731,469
JBrowse link
G Ptx3 pentraxin 3 enables ISO
IBA
(PMID:23544079)
PMID:21873635
RGD PMID:23544079 PMID:21873635 RGD:13792537 NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
JBrowse link
complement component C3b binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H enables ISO PR:P01027|UniProtKB:P01024 (MGI:3613281|PMID:16023208), (MGI:3692807|PMID:17028856) RGD PMID:16023208 PMID:17028856 MGI:3613281 MGI:3692807 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Cfhr4 complement factor H-related 4 enables ISO UniProtKB:P01024 (MGI:3692807|PMID:17028856) RGD PMID:17028856 MGI:3692807 NCBI chr13:51,422,592...51,491,476
Ensembl chr13:51,422,592...51,491,502
JBrowse link
G Itgam integrin subunit alpha M enables ISO UniProtKB:P01027 (MGI:5905548|PMID:20199584) RGD PMID:20199584 MGI:5905548 NCBI chr 1:182,659,047...182,709,495
Ensembl chr 1:182,659,000...182,709,503
JBrowse link
G Itgb2 integrin subunit beta 2 enables ISO UniProtKB:P01027 (MGI:5905548|PMID:20199584) RGD PMID:20199584 MGI:5905548 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Phb1 prohibitin 1 enables ISO (PMID:17070910) RGD PMID:17070910 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 enables ISO
IBA
UniProtKB:P01024 (PMID:17051150)
PMID:21873635
RGD PMID:17051150 PMID:21873635 RGD:13792537 NCBI chr  X:61,144,926...61,170,212
Ensembl chr  X:61,144,928...61,170,212
JBrowse link
complement component C4b binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Masp2 MBL associated serine protease 2 enables ISO
IEA
(PMID:22949645)
GO_REF:0000107
RGD
Ensembl
PMID:22949645 GO_REF:0000107 NCBI chr 5:159,035,892...159,049,561
Ensembl chr 5:159,035,911...159,049,580
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  molecular_function 19910
    binding 16997
      protein binding 14384
        opsonin binding 18
          collectin binding 0
          complement component C1q complex binding 9
          complement component C3b binding 6
          complement component C4b binding 1
          complement component iC3b binding 0
          pentraxin binding 0
paths to the root