Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate development
go back to main search page
Accession:GO:0001840 term browser browse the term
Definition:The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
neural plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5302997|PMID:22102609) MGI
Ensembl		 PMID:22102609 GO_REF:0000107 MGI:5302997 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191 		JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627)
(MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766)		 MGI PMID:16571627 PMID:17229766 MGI:3624185 MGI:3703464 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3821640|PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335 		JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (MGI:73644|PMID:7774020) MGI PMID:7774020 MGI:73644 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714667|PMID:17507402)
(MGI:3821807|PMID:18794329)		 MGI
Ensembl		 PMID:17507402 PMID:18794329 GO_REF:0000107 MGI:3714667 MGI:3821807 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624179|PMID:16613831) MGI
Ensembl		 PMID:16613831 GO_REF:0000107 MGI:3624179 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Nog noggin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3056222|PMID:15384171) MGI
Ensembl		 PMID:15384171 GO_REF:0000107 MGI:3056222 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15101
    developmental process 6018
      anatomical structure development 5681
        tissue development 2022
          epithelium development 1271
            neural plate development 13
              neural plate axis specification 2
              neural plate morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 15101
    developmental process 6018
      anatomical structure development 5681
        multicellular organism development 4643
          embryo development 1253
            embryo development ending in birth or egg hatching 837
              chordate embryonic development 822
                neural plate development 13
                  neural plate axis specification 2
                  neural plate morphogenesis + 8
paths to the root