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ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate development
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Accession:GO:0001840 term browser browse the term
Definition:The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.


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neural plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5302997|PMID:22102609) MGI
Ensembl		 PMID:22102609 GO_REF:0000107 MGI:5302997 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G ZIC2 Zic family member 2 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055 		JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766) MGI PMID:16571627 PMID:17229766 MGI:3624185 MGI:3703464 NCBI chr38:21,822,873...21,824,537 JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2CD3 C2 domain containing 3 centriole elongation regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:24,127,390...24,272,473
Ensembl chr21:24,127,598...24,272,657 		JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G UCP3 uncoupling protein 3 acts_upstream_of_or_within ISO (MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:3821640 NCBI chr21:24,272,522...24,290,304
Ensembl chr21:24,277,896...24,288,639 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTT huntingtin acts_upstream_of_or_within ISO (MGI:73644|PMID:7774020) MGI PMID:7774020 MGI:73644 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3714667|PMID:17507402)
(MGI:3821807|PMID:18794329)		 MGI
Ensembl		 PMID:17507402 PMID:18794329 GO_REF:0000107 MGI:3714667 MGI:3821807 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624179|PMID:16613831) MGI
Ensembl		 PMID:16613831 GO_REF:0000107 MGI:3624179 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G NOG noggin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3056222|PMID:15384171) MGI
Ensembl		 PMID:15384171 GO_REF:0000107 MGI:3056222 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16839
    developmental process 6433
      anatomical structure development 6065
        tissue development 2161
          epithelium development 1348
            neural plate development 14
              neural plate axis specification 3
              neural plate morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 16839
    developmental process 6433
      anatomical structure development 6065
        multicellular organism development 4941
          embryo development 1322
            embryo development ending in birth or egg hatching 881
              chordate embryonic development 864
                neural plate development 14
                  neural plate axis specification 3
                  neural plate morphogenesis + 8
paths to the root