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ONTOLOGY REPORT - ANNOTATIONS

Term:neural plate development
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Accession:GO:0001840 term browser browse the term
Definition:The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.


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neural plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5302997|PMID:22102609) MGI
Ensembl		 PMID:22102609 GO_REF:0000107 MGI:5302997 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030 		JBrowse link
G ZIC2 Zic family member 2 involved_in ISO (MGI:3714675|PMID:17490632) MGI PMID:17490632 MGI:3714675 NCBI chr13:81,151,669...81,156,648 JBrowse link
G ZIC3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:126,691,534...126,705,788
Ensembl chr  X:136,954,024...136,967,819 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008 		JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624185|PMID:16571627) MGI
Ensembl		 PMID:16571627 GO_REF:0000107 MGI:3624185 NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627), (MGI:3703464|PMID:17229766) MGI PMID:16571627 PMID:17229766 MGI:3624185 MGI:3703464 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2CD3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3821640|PMID:19004860) MGI
Ensembl		 PMID:19004860 GO_REF:0000107 MGI:3821640 NCBI chr11:69,085,434...69,244,791 JBrowse link
G PTCH1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,542,675...66,616,820
Ensembl chr 9:94,668,365...94,741,453 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTT huntingtin acts_upstream_of_or_within ISO (MGI:73644|PMID:7774020) MGI PMID:7774020 MGI:73644 NCBI chr 4:3,215,081...3,388,587
Ensembl chr 4:3,128,718...3,283,730 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3821807|PMID:18794329)
(MGI:3714667|PMID:17507402)		 MGI
Ensembl		 PMID:17507402 PMID:18794329 GO_REF:0000107 MGI:3714667 MGI:3821807 NCBI chr2B:6,945,289...7,111,595
Ensembl chr2B:120,521,145...120,687,209 		JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3624179|PMID:16613831) MGI
Ensembl		 PMID:16613831 GO_REF:0000107 MGI:3624179 NCBI chr10:98,372,251...98,378,811
Ensembl chr10:101,844,792...101,853,916 		JBrowse link
G NOG noggin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3640733|PMID:16712836) MGI
Ensembl		 PMID:16712836 GO_REF:0000107 MGI:3640733 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092 		JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3056222|PMID:15384171) MGI
Ensembl		 PMID:15384171 GO_REF:0000107 MGI:3056222 NCBI chr 6:164,112,117...164,122,253
Ensembl chr 6:169,095,723...169,106,595 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15680
    developmental process 6222
      anatomical structure development 5858
        tissue development 2087
          epithelium development 1322
            neural plate development 13
              neural plate axis specification 2
              neural plate morphogenesis + 8
Path 2
Term Annotations click to browse term
  biological_process 15680
    developmental process 6222
      anatomical structure development 5858
        multicellular organism development 4762
          embryo development 1280
            embryo development ending in birth or egg hatching 858
              chordate embryonic development 841
                neural plate development 13
                  neural plate axis specification 2
                  neural plate morphogenesis + 8
paths to the root