ONTOLOGY REPORT - ANNOTATIONS
Term: epithelial to mesenchymal transition
Accession: GO:0001837
browse the term
Definition: A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.
Synonyms: exact_synonym: EMT; epithelial-mesenchymal transition; mesenchymal cell differentiation from epithelial cell
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Akna
AT-hook transcription factor
involved_in
ISO
(MGI:6294240|PMID:30787442)
RGD
PMID:30787442
MGI:6294240
NCBI chr 5:79,184,087...79,232,370
Ensembl chr 5:79,184,088...79,222,687
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Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3640731|PMID:16730346), (MGI:5299248|PMID:21983003) (PMID:15110716), (PMID:18184661)
UniProt RGD
PMID:15110716 PMID:16730346 PMID:18184661 PMID:21983003
GO_REF:0000024 MGI:3640731 MGI:5299248
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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Cul7
cullin 7
involved_in
ISO ISS
(PMID:20139075) GO_REF:0000024
RGD UniProt
PMID:20139075
GO_REF:0000024
NCBI chr 9:16,629,491...16,643,527
Ensembl chr 9:16,629,401...16,643,182
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Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr 7:120,761,843...120,765,012
Ensembl chr 7:120,761,826...120,780,641
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Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:24910439)
RGD
PMID:24910439
NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
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Dlg5
discs large MAGUK scaffold protein 5
involved_in
ISO
(PMID:28169360)
RGD
PMID:28169360
NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
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Eng
endoglin
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
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Epb41l5
erythrocyte membrane protein band 4.1 like 5
involved_in
ISO
MGI:3578147 (MGI:3714667|PMID:17507402), (MGI:3821807|PMID:18794329)
RGD
PMID:17507402 PMID:18794329
MGI:3714667 MGI:3821807
NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
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Fam83d
family with sequence similarity 83, member D
involved_in
ISO
(PMID:24344117)
RGD
PMID:24344117
NCBI chr 3:155,269,344...155,288,612
Ensembl chr 3:155,269,347...155,288,533
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Fgfr1
Fibroblast growth factor receptor 1
involved_in
ISO IEA
(PMID:26451614) GO_REF:0000107
RGD Ensembl
PMID:26451614
GO_REF:0000107
NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
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Fgfr2
fibroblast growth factor receptor 2
IDA
RGD
PMID:7803853
RGD:632663
NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
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Flna
filamin A
acts_upstream_of_or_within
ISO
MGI:1923816 (MGI:5085960|PMID:21709252)
RGD
PMID:21709252
MGI:5085960
NCBI chr X:156,460,785...156,487,245
Ensembl chr X:156,463,953...156,487,245
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Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO ISS
(PMID:15448698) GO_REF:0000024
RGD UniProt
PMID:15448698
GO_REF:0000024
NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
IEA ISO
GO_REF:0000107 (MGI:3772289|PMID:18037992)
Ensembl RGD
PMID:18037992
GO_REF:0000107 MGI:3772289
NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
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Hmga2
high mobility group AT-hook 2
involved_in
ISO ISS
(PMID:18832382) GO_REF:0000024
RGD UniProt
PMID:18832382
GO_REF:0000024
NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
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Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
involved_in
ISS ISO
GO_REF:0000024 (MGI:3698386|PMID:17273560)
HGNC RGD HGNC-UCL
PMID:17273560
GO_REF:0000024 MGI:3698386
NCBI chr10:34,955,713...34,961,662
Ensembl chr10:34,955,716...34,961,608
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Lef1
lymphoid enhancer binding factor 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:2683382|PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107 MGI:2683382
NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
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Lims1
LIM zinc finger domain containing 1
NOT NOT|involved_in
ISO
(PMID:20926685)
RGD
PMID:20926685
NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082
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LOC103689931
heterogeneous nuclear ribonucleoprotein A/B
involved_in
ISS
GO_REF:0000024
HGNC HGNC-UCL
GO_REF:0000024
NCBI chr10:37,049,400...37,055,348
Ensembl chr10:37,049,677...37,055,282 Ensembl chr10:37,049,677...37,055,282
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Loxl2
lysyl oxidase-like 2
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:16096638)
Ensembl UniProt RGD
PMID:16096638
GO_REF:0000024 GO_REF:0000107
NCBI chr15:51,276,022...51,365,238
Ensembl chr15:51,303,909...51,365,234
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Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:16096638)
RGD
PMID:16096638
NCBI chr 4:113,866,782...113,883,713
Ensembl chr 4:113,866,804...113,883,477
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Msx1
msh homeobox 1
involved_in
ISO
(MGI:4418636|PMID:11023873)
RGD
PMID:11023873
MGI:4418636
NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
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Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (MGI:3053252|PMID:15339668)
RGD
PMID:15339668
MGI:3053252
NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
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Nog
noggin
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3783944|PMID:17218603) GO_REF:0000024
Ensembl RGD UniProt
PMID:17218603
GO_REF:0000024 GO_REF:0000107 MGI:3783944
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
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Notch1
notch receptor 1
acts_upstream_of_or_within involved_in
ISO
(PMID:17984306) MGI:1857230 (MGI:3027664|PMID:14701881)
RGD
PMID:14701881 PMID:17984306
MGI:3027664
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
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Notch4
notch receptor 4
involved_in
ISO
(PMID:17984306)
RGD
PMID:17984306
NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
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Ppp3r1
protein phosphatase 3, regulatory subunit B, alpha
acts_upstream_of_or_within
ISO
MGI:3044031 (MGI:3053252|PMID:15339668)
RGD
PMID:15339668
MGI:3053252
NCBI chr14:100,311,224...100,360,879
Ensembl chr14:100,311,173...100,360,879
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1857411 (MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
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Rflnb
refilin B
acts_upstream_of_or_within
ISO
MGI:95556 (MGI:5085960|PMID:21709252)
RGD
PMID:21709252
MGI:5085960
NCBI chr10:64,196,103...64,202,380
Ensembl chr10:64,196,127...64,202,380
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Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P70336 (MGI:3513217|PMID:15464581)
Ensembl RGD
PMID:15464581
GO_REF:0000107 MGI:3513217
NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
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Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
ISO
UniProtKB:P70335 (MGI:3513217|PMID:15464581)
RGD
PMID:15464581
MGI:3513217
NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
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Snai1
snail family transcriptional repressor 1
involved_in
TAS ISO
(MGI:1352954|PMID:10655586), (MGI:2153695|PMID:11689706), (MGI:5294539|PMID:18832382) (PMID:16096638)
RGD
PMID:10655586 PMID:11689706 PMID:16096638 PMID:18832382 , PMID:15155580
MGI:1352954 MGI:2153695 MGI:5294539 , RGD:1302246
NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
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Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within involved_in
ISO
(PMID:17984306), (PMID:9182671) MGI:2447175 (MGI:3762325|PMID:17916597) (MGI:892810|PMID:9182671) MGI:2447175 (MGI:3762325|PMID:17916597), (MGI:892810|PMID:9182671)
RGD
PMID:9182671 PMID:17916597 PMID:17984306
MGI:3762325 MGI:892810
NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within involved_in
ISS ISO
GO_REF:0000024 MGI:2429649 (MGI:3041362|PMID:15096597)
UniProt RGD
PMID:15096597
GO_REF:0000024 MGI:3041362
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Tgfb1
transforming growth factor, beta 1
involved_in
IDA ISO
(PMID:25893292), (PMID:29529050)
RGD
PMID:25893292 PMID:29529050 , PMID:10504497
RGD:1578678
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
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Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10092230), (PMID:18223299)
AgBase RGD
PMID:10092230 PMID:18223299
GO_REF:0000024
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
(PMID:15761148)
RGD
PMID:15761148
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
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Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO IBA
(PMID:18184661) PMID:21873635
RGD
PMID:18184661 , PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
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Tgfbr3l
transforming growth factor beta receptor 3 like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr12:2,540,494...2,545,315
Ensembl chr12:2,542,612...2,545,740
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Trim28
tripartite motif-containing 28
involved_in
ISS ISO
GO_REF:0000024 (MGI:3698386|PMID:17273560)
HGNC RGD HGNC-UCL
PMID:17273560
GO_REF:0000024 MGI:3698386
NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
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Trip10
thyroid hormone receptor interactor 10
IMP
RGD
PMID:23819628
RGD:11535143
NCBI chr 9:9,689,214...9,702,353
Ensembl chr 9:9,689,475...9,702,306
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Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
MGI:98958 (MGI:5634837|PMID:25813538)
RGD
PMID:25813538
MGI:5634837
NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
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Wnt4
Wnt family member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:12841867)
Ensembl RGD
PMID:12841867
GO_REF:0000107
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Wnt5a
Wnt family member 5A
involved_in
ISO
(PMID:12841867)
RGD
PMID:12841867
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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Ctnnb1
catenin beta 1
involved_in
ISO ISS
(PMID:17072303) GO_REF:0000024
RGD UniProt
PMID:17072303
GO_REF:0000024
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:17072303)
RGD
PMID:17072303
NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514 Ensembl chr 1:276,659,542...276,730,514
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Adam15
ADAM metallopeptidase domain 15
acts_upstream_of_or_within
ISO
(MGI:4458867|PMID:19156209)
RGD
PMID:19156209
MGI:4458867
NCBI chr 2:188,661,831...188,672,337
Ensembl chr 2:188,661,699...188,672,247
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Bmp2
bone morphogenetic protein 2
involved_in
ISO IEA
(PMID:18184661) GO_REF:0000107
RGD Ensembl
PMID:18184661
GO_REF:0000107
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9DBX7 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
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Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
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LOC103690035
TGF-beta receptor type-1-like
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:64,565,358...64,585,219
Ensembl chr 5:64,566,804...64,584,309
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Notch1
notch receptor 1
involved_in
ISO
(MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
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Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:6,761,031...6,798,739
Ensembl chr 3:6,773,813...6,798,737
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Rtn4
reticulon 4
acts_upstream_of_or_within involved_in
IEA ISO
GO_REF:0000107 (MGI:4458867|PMID:19156209)
Ensembl RGD
PMID:19156209
GO_REF:0000107 MGI:4458867
NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
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Tbx3
T-box transcription factor 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:22130515)
Ensembl RGD
PMID:22130515
GO_REF:0000107
NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
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Tgfb2
transforming growth factor, beta 2
involved_in
ISO ISS
(PMID:10092230) GO_REF:0000024
RGD UniProt
PMID:10092230
GO_REF:0000024
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
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Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
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Tgfbr3
transforming growth factor beta receptor 3
involved_in
ISO
(PMID:18184661)
RGD
PMID:18184661
NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
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Wnt16
Wnt family member 16
acts_upstream_of_or_within
ISO
(MGI:4458867|PMID:19156209)
RGD
PMID:19156209
MGI:4458867
NCBI chr 4:49,369,246...49,388,156
Ensembl chr 4:49,369,296...49,379,703
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Wnt2
Wnt family member 2
acts_upstream_of_or_within
ISO
MGI:4361155 (MGI:4439199|PMID:20159597)
RGD
PMID:20159597
MGI:4439199
NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
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Acvrl1
activin A receptor like type 1
NOT NOT|involved_in
ISO
(MGI:2674189|PMID:12941632)
RGD
PMID:12941632
MGI:2674189
NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
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Eng
endoglin
NOT NOT|involved_in
ISO
(MGI:2674189|PMID:12941632)
RGD
PMID:12941632
MGI:2674189
NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
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Has2
hyaluronan synthase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:1861536|PMID:10930438)
UniProt RGD
PMID:10930438
GO_REF:0000024 MGI:1861536
NCBI chr 7:96,438,046...96,464,049
Ensembl chr 7:96,438,046...96,464,049
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Efna1
ephrin A1
involved_in
ISO
(MGI:4847981|PMID:20960543)
RGD
PMID:20960543
MGI:4847981
NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
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Erg
ETS transcription factor ERG
acts_upstream_of_or_within
ISO
MGI:5443838 (MGI:5442628|PMID:22932696)
RGD
PMID:22932696
MGI:5442628
NCBI chr11:35,645,317...35,749,637
Ensembl chr11:35,646,116...35,749,594
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (MGI:3530185|PMID:15680351)
RGD
PMID:15680351
MGI:3530185
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:1341800 (MGI:3530185|PMID:15680351)
RGD
PMID:15680351
MGI:3530185
NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
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Pdcd4
programmed cell death 4
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172 , PMID:23441172
RGD:10400865 , RGD:10400865
NCBI chr 1:274,616,625...274,648,204
Ensembl chr 1:274,625,224...274,648,204
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Spry1
sprouty RTK signaling antagonist 1
involved_in
IGI
PMID:23441172
BHF-UCL
PMID:23441172 , PMID:23441172
RGD:10400865 , RGD:10400865
NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
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Bmp4
bone morphogenetic protein 4
NOT NOT|involved_in
ISO
(MGI:3814273|PMID:18924235)
RGD
PMID:18924235
MGI:3814273
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within involved_in
ISO
(MGI:4359139|PMID:19509466), (MGI:5002778|PMID:21364285) (MGI:5002778|PMID:21364285)
RGD
PMID:19509466 PMID:21364285
MGI:4359139 MGI:5002778
NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1860511 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
acts_upstream_of_or_within
ISO
MGI:1341800 (MGI:3783952|PMID:17303760)
RGD
PMID:17303760
MGI:3783952
NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:97169 (MGI:3810851|PMID:18667074)
RGD
PMID:18667074
MGI:3810851
NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
G
Msx2
msh homeobox 2
acts_upstream_of_or_within involved_in
IEA ISO
GO_REF:0000107 MGI:97168 (MGI:3810851|PMID:18667074)
Ensembl RGD
PMID:18667074
GO_REF:0000107 MGI:3810851
NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(MGI:3027664|PMID:14701881)
RGD
PMID:14701881
MGI:3027664
NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4946551|PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107 MGI:4946551
NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
UniProtKB:Q3UZ96 (MGI:3808643|PMID:18663143)
RGD
PMID:18663143
MGI:3808643
NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2447175 (MGI:3808643|PMID:18663143)
RGD
PMID:18663143
MGI:3808643
NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
G
Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO
MGI:5432904 (MGI:5613881|PMID:25318679)
RGD
PMID:25318679
MGI:5613881
NCBI chr10:77,537,340...77,543,710
Ensembl chr10:77,537,340...77,543,192
G
Eomes
eomesodermin
involved_in
ISO
(MGI:3772748|PMID:18171685)
RGD
PMID:18171685
MGI:3772748
NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
G
Tasor
transcription activation suppressor
involved_in
IEA ISO
GO_REF:0000107 (MGI:6109647|PMID:28839193)
Ensembl RGD
PMID:28839193
GO_REF:0000107 MGI:6109647
NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within involved_in
IEA ISO
GO_REF:0000107 MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl RGD
PMID:25813538
GO_REF:0000107 MGI:5634837
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
G
Adipor1
adiponectin receptor 1
involved_in
ISO
(PMID:23776679)
RGD
PMID:23776679
NCBI chr13:51,240,470...51,260,233
Ensembl chr13:51,240,911...51,260,228
G
Dab2ip
DAB2 interacting protein
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20080667), (PMID:20154697)
UniProt Ensembl RGD
PMID:20080667 PMID:20154697
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
G
Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of_or_within
ISO
MGI:5515616 (MGI:5503293|PMID:23580654)
RGD
PMID:23580654
MGI:5503293
NCBI chr 1:78,800,754...78,812,483
Ensembl chr 1:78,800,754...78,812,483
G
Efna1
ephrin A1
involved_in
ISO
(MGI:4847981|PMID:20960543)
RGD
PMID:20960543
MGI:4847981
NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
G
Foxa1
forkhead box A1
involved_in
ISO IEA
(PMID:20160041) GO_REF:0000107
RGD Ensembl
PMID:20160041
GO_REF:0000107
NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
G
Foxa2
forkhead box A2
involved_in
ISO IEA
(PMID:20160041) GO_REF:0000107
RGD Ensembl
PMID:20160041
GO_REF:0000107
NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
G
Gata3
GATA binding protein 3
acts_upstream_of
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
G
Hpn
hepsin
involved_in
IEA IBA ISO ISS
GO_REF:0000107 PMID:21873635 (PMID:19843851) GO_REF:0000024
Ensembl RGD UniProt
PMID:19843851 , PMID:21873635 , PMID:21873635
GO_REF:0000024 GO_REF:0000107, RGD:13792537 , RGD:13792537
NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
G
Il17rd
interleukin 17 receptor D
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr16:2,670,471...2,737,271
Ensembl chr16:2,670,618...2,731,808
G
Ldlrad4
low density lipoprotein receptor class A domain containing 4
involved_in
ISO
(PMID:24627487)
RGD
PMID:24627487
NCBI chr18:63,717,423...64,045,224
Ensembl chr18:63,882,610...64,044,023
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:19443654)
RGD
PMID:19443654
NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
G
Nkx2-1
NK2 homeobox 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19293183)
Ensembl RGD
PMID:19293183
GO_REF:0000107
NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
G
Ovol2
ovo-like zinc finger 2
involved_in
ISO
(MGI:5574425|PMID:24735879), (MGI:6284898|PMID:28455959)
RGD
PMID:24735879 PMID:28455959
MGI:5574425 MGI:6284898
NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063
G
Pbld1
phenazine biosynthesis-like protein domain containing 1
involved_in
ISO
(PMID:23687415)
RGD
PMID:23687415
NCBI chr20:27,103,300...27,118,650
Ensembl chr20:27,103,317...27,117,663
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
involved_in
ISO
(PMID:20080667)
RGD
PMID:20080667
NCBI chr10:37,534,449...37,554,861
Ensembl chr10:37,535,871...37,554,664
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
G
Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of_or_within involved_in
ISO
(PMID:23983127) (MGI:5529200|PMID:23983127)
RGD
PMID:23983127
MGI:5529200
NCBI chr 1:226,543,671...226,572,414
Ensembl chr 1:226,547,531...226,572,349
G
Sfrp1
secreted frizzled-related protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19095296)
Ensembl RGD
PMID:19095296
GO_REF:0000107
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(PMID:19095296)
RGD
PMID:19095296
NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 3:108,795,337...108,861,650
Ensembl chr 3:108,795,235...108,857,556
G
Spred2
sprouty-related, EVH1 domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6414689|PMID:25576668)
UniProt RGD
PMID:25576668
GO_REF:0000024 MGI:6414689
NCBI chr14:104,268,362...104,290,206
Ensembl chr14:104,191,517...104,290,456
G
Spred3
sprouty-related, EVH1 domain containing 3
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 1:88,101,213...88,112,719
Ensembl chr 1:88,103,719...88,112,683
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
G
Spry2
sprouty RTK signaling antagonist 2
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
G
Strap
serine/threonine kinase receptor associated protein
involved_in
ISO
(PMID:23687415)
RGD
PMID:23687415
NCBI chr 4:171,730,629...171,744,877
Ensembl chr 4:171,730,635...171,745,377
G
Tgfbr3
transforming growth factor beta receptor 3
acts_upstream_of_or_within
ISO
(MGI:3762085|PMID:17823118)
RGD
PMID:17823118
MGI:3762085
NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
G
Trim62
tripartite motif-containing 62
acts_upstream_of_or_within
ISO
MGI:5538538 (MGI:5585203|PMID:24890125)
RGD
PMID:24890125
MGI:5585203
NCBI chr 5:147,068,725...147,099,024
Ensembl chr 5:147,069,616...147,095,242
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:20813961
RGD:11568680
NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
G
Usf3
upstream transcription factor family member 3
involved_in
ISO
(PMID:28011713)
RGD
PMID:28011713
NCBI chr11:61,427,140...61,499,668
Ensembl chr11:61,432,064...61,499,557
G
Vasn
vasorin
involved_in
ISO
(PMID:21170088)
RGD
PMID:21170088
NCBI chr10:11,121,041...11,131,548
Ensembl chr10:11,121,041...11,131,548
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
G
Znf750
zinc finger protein 750
involved_in
ISO IEA
(PMID:32042337) GO_REF:0000107
RGD Ensembl
PMID:32042337
GO_REF:0000107
NCBI chr10:110,698,581...110,701,222
Ensembl chr10:110,698,891...110,701,137
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (MGI:3783944|PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107 MGI:3783944
NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
G
Fuz
fuzzy planar cell polarity protein
involved_in
ISS ISO
GO_REF:0000024 (MGI:5498583|PMID:23806618)
UniProt RGD
PMID:23806618
GO_REF:0000024 MGI:5498583
NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
G
Sfrp1
secreted frizzled-related protein 1
acts_upstream_of_or_within involved_in
IEA ISO
GO_REF:0000107 MGI:3045799 (MGI:4437369|PMID:20130188)
Ensembl RGD
PMID:20130188
GO_REF:0000107 MGI:4437369
NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
G
Gsc
goosecoid homeobox
involved_in
ISO
(PMID:24290375)
RGD
PMID:24290375
NCBI chr 6:128,147,181...128,149,220
Ensembl chr 6:128,147,181...128,149,220
G
Kbtbd8
kelch repeat and BTB domain containing 8
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:26399832) GO_REF:0000024
Ensembl RGD UniProt
PMID:26399832
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:127,164,728...127,177,537
Ensembl chr 4:127,164,453...127,177,477
G
Klhl12
kelch-like family member 12
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:27716508)
Ensembl UniProt RGD
PMID:27716508
GO_REF:0000024 GO_REF:0000107
NCBI chr13:51,280,933...51,314,753
Ensembl chr13:51,282,684...51,314,797
G
Lrp6
LDL receptor related protein 6
involved_in
ISO IBA
(PMID:11029007) PMID:21873635
RGD
PMID:11029007 , PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
G
Nolc1
nucleolar and coiled-body phosphoprotein 1
involved_in
ISO ISS
(PMID:26399832) GO_REF:0000024
RGD UniProt
PMID:26399832
GO_REF:0000024
NCBI chr 1:265,829,055...265,839,819
Ensembl chr 1:265,829,108...265,839,818
G
Pdcd6
programmed cell death 6
involved_in
ISO ISS
(PMID:27716508) GO_REF:0000024
RGD UniProt
PMID:27716508
GO_REF:0000024
NCBI chr 1:31,576,183...31,591,852
Ensembl chr 1:31,576,183...31,591,849
G
Pef1
penta-EF hand domain containing 1
involved_in
ISO ISS
(PMID:27716508) GO_REF:0000024
RGD UniProt
PMID:27716508
GO_REF:0000024
NCBI chr 5:148,320,610...148,343,876
Ensembl chr 5:148,320,438...148,343,886
G
Tcof1
treacle ribosome biogenesis factor 1
involved_in
ISO
(PMID:26399832)
RGD
PMID:26399832
NCBI chr18:56,081,863...56,115,719
Ensembl chr18:56,082,195...56,115,593
G
Jag1
jagged canonical Notch ligand 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801 , PMID:20951801
RGD:13601997 , RGD:13601997
NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
G
Notch1
notch receptor 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801 , PMID:20951801
RGD:13601997 , RGD:13601997
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(MGI:4838344|PMID:20804746)
RGD
PMID:20804746
MGI:4838344
NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:21743278
RGD:7243870
NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
G
Alx1
ALX homeobox 1
involved_in
ISO ISS
(PMID:23288509) GO_REF:0000024
RGD UniProt
PMID:23288509
GO_REF:0000024
NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
G
Axin2
axin 2
involved_in
ISO IEA
(PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303
GO_REF:0000107
NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
G
Bambi
BMP and activin membrane-bound inhibitor
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr17:56,905,419...56,909,675
Ensembl chr17:56,905,112...56,909,992
G
Bcl9l
BCL9 like
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr 8:48,805,684...48,835,794
Ensembl chr 8:48,805,684...48,834,312
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:20890042) MGI:3583785 (MGI:3611958|PMID:16314491) GO_REF:0000107
RGD Ensembl
PMID:16314491 PMID:20890042
GO_REF:0000107 MGI:3611958
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (MGI:5502250|PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107 MGI:5502250
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
G
Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:20018240)
RGD
PMID:20018240
NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
G
Crb2
crumbs cell polarity complex component 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829)
UniProt RGD
PMID:22072575 PMID:27870829
GO_REF:0000024 MGI:5296388 MGI:5823085
NCBI chr 3:22,037,812...22,061,247
Ensembl chr 3:22,038,357...22,058,871
G
Ctnnb1
catenin beta 1
involved_in
ISO
UniProtKB:Q9NX18 (PMID:23983127)
RGD
PMID:23983127
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
G
Dab2
DAB adaptor protein 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:5442513|PMID:15734730)
Ensembl RGD
PMID:15734730
GO_REF:0000107 MGI:5442513
NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
involved_in
ISO
(PMID:20154697)
RGD
PMID:20154697
NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO IEA
(PMID:24226523) GO_REF:0000107
RGD Ensembl
PMID:24226523
GO_REF:0000107
NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:22991501)
RGD
PMID:22991501
NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
G
Gcnt2
glucosaminyl (N-acetyl) transferase 2 (I blood group)
involved_in
ISO
(PMID:21750175) (MGI:5545971|PMID:21750175)
RGD
PMID:21750175
MGI:5545971
NCBI chr17:21,634,546...21,677,477
Ensembl chr17:21,634,551...21,739,408
G
Glipr2
GLI pathogenesis-related 2
involved_in
ISO
(PMID:23516513)
RGD
PMID:23516513
NCBI chr 5:59,415,415...59,446,732
Ensembl chr 5:59,416,076...59,446,647
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:19553350
RGD:9590229
NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
G
Il1b
interleukin 1 beta
involved_in
IEA ISO
GO_REF:0000107 (PMID:25204733)
Ensembl RGD
PMID:25204733
GO_REF:0000107
NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
G
Il6
interleukin 6
involved_in
ISO
(PMID:25916550)
RGD
PMID:25916550
NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
G
Isl1
ISL LIM homeobox 1
involved_in
IMP
PMID:23270756
BHF-UCL
PMID:23270756 , PMID:23270756
RGD:13210526 , RGD:13210526
NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
G
Lef1
lymphoid enhancer binding factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20018240)
Ensembl RGD
PMID:20018240
GO_REF:0000107
NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
G
Loxl2
lysyl oxidase-like 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24239292) GO_REF:0000024
Ensembl RGD UniProt
PMID:24239292
GO_REF:0000024 GO_REF:0000107
NCBI chr15:51,276,022...51,365,238
Ensembl chr15:51,303,909...51,365,234
G
Mdk
midkine
involved_in
ISS ISO
GO_REF:0000024 (PMID:18469519)
UniProt RGD
PMID:18469519
GO_REF:0000024
NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
G
Myocd
myocardin
involved_in
IMP
PMID:23270756
BHF-UCL
PMID:23270756 , PMID:23270756
RGD:13210526 , RGD:13210526
NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:6,761,031...6,798,739
Ensembl chr 3:6,773,813...6,798,737
G
Pdpn
podoplanin
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:17046996), (PMID:21376833)
UniProt RGD
PMID:17046996 PMID:21376833 , PMID:21873635 , PMID:21873635
GO_REF:0000024, RGD:13792537 , RGD:13792537
NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077), (PMID:21307346)
RGD
PMID:19158077 PMID:21307346
NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
G
Sdcbp
syndecan binding protein
involved_in
ISO ISS
(PMID:25893292) GO_REF:0000024
RGD UniProt
PMID:25893292
GO_REF:0000024
NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
G
Serpinb3
serpin family B member 3
involved_in
ISO
(PMID:20527027)
RGD
PMID:20527027
NCBI chr13:27,186,701...27,193,211
Ensembl chr13:27,187,130...27,192,592
G
Smad2
SMAD family member 2
involved_in
ISO
(MGI:2683382|PMID:14691138)
RGD
PMID:14691138
MGI:2683382
NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
G
Smad3
SMAD family member 3
involved_in
ISO
(PMID:18505915), (PMID:21307346)
RGD
PMID:18505915 PMID:21307346
NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:2683382|PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107 MGI:2683382
NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
(PMID:20018240), (PMID:23288509) (MGI:4837019|PMID:20890042), (MGI:5548026|PMID:24239292)
RGD
PMID:20018240 PMID:20890042 PMID:23288509 PMID:24239292
MGI:4837019 MGI:5548026
NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
G
Tbx20
T-box transcription factor 20
involved_in
IEA ISO
GO_REF:0000107 (MGI:5299248|PMID:21983003)
Ensembl RGD
PMID:21983003
GO_REF:0000107 MGI:5299248
NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within involved_in
ISS ISO
GO_REF:0000024 (MGI:3821807|PMID:18794329) (PMID:17999987), (PMID:18505915)
UniProt RGD
PMID:17999987 PMID:18505915 PMID:18794329
GO_REF:0000024 MGI:3821807
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
G
Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in
ISO
(PMID:18762808)
RGD
PMID:18762808
NCBI chr 1:199,664,039...199,670,970
Ensembl chr 1:199,664,173...199,670,961
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17999987), (PMID:18505915)
AgBase RGD UniProt
PMID:17999987 PMID:18505915
GO_REF:0000024
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:2683382|PMID:14691138) (PMID:18505915), (PMID:18718461)
AgBase RGD
PMID:14691138 PMID:18505915 PMID:18718461
GO_REF:0000024 MGI:2683382
NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
UniProtKB:P10600 (MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(PMID:26459119)
RGD
PMID:26459119
NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:18297062) (MGI:4838344|PMID:20804746), (MGI:5284765|PMID:18297062), (MGI:5284780|PMID:17332324)
RGD
PMID:17332324 PMID:18297062 PMID:20804746
MGI:4838344 MGI:5284765 MGI:5284780
NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
G
Wwtr1
WW domain containing transcription regulator 1
involved_in
ISO
(PMID:18227151)
RGD
PMID:18227151
NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
G
Zfp703
zinc finger protein 703
involved_in
ISO
(MGI:4940410|PMID:21317240)
RGD
PMID:21317240
MGI:4940410
NCBI chr16:69,237,857...69,242,028
Ensembl chr16:69,237,857...69,242,028
G
Acvr1
activin A receptor type 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:3610266|PMID:16140292)
Ensembl RGD
PMID:16140292
GO_REF:0000107 MGI:3610266
NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
G
Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
(MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(MGI:3801267|PMID:17050629)
RGD
PMID:17050629
MGI:3801267
NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO IEA
(PMID:23940118) GO_REF:0000107
RGD Ensembl
PMID:23940118
GO_REF:0000107
NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
G
Dag1
dystroglycan 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
G
Ell3
elongation factor for RNA polymerase II 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5438719|PMID:22768269)
UniProt RGD
PMID:22768269
GO_REF:0000024 MGI:5438719
NCBI chr 3:113,400,395...113,405,869
Ensembl chr 3:113,401,734...113,405,829
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3703403|PMID:17046737)
UniProt RGD
PMID:17046737
GO_REF:0000024 MGI:3703403
NCBI chr11:421,253...783,037
Ensembl chr11:421,135...782,954
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:16816361)
RGD
PMID:16816361
NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
G
LOC103690035
TGF-beta receptor type-1-like
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:64,565,358...64,585,219
Ensembl chr 5:64,566,804...64,584,309
G
Mcrip1
MAPK regulated co-repressor interacting protein 1
involved_in
ISO ISS
(PMID:25728771) GO_REF:0000024
RGD UniProt
PMID:25728771
GO_REF:0000024
NCBI chr10:109,720,144...109,727,595
Ensembl chr10:109,720,144...109,722,195
G
Phldb1
pleckstrin homology-like domain, family B, member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:23940118)
Ensembl RGD
PMID:23940118
GO_REF:0000107
NCBI chr 8:48,997,189...49,045,176
Ensembl chr 8:48,997,184...49,045,154
G
Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
G
Pofut2
protein O-fucosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3604508|MGI:4127173 (MGI:4838381|PMID:20637190)
RGD
PMID:20637190
MGI:4838381
NCBI chr20:12,117,811...12,128,747
Ensembl chr20:12,117,811...12,128,747
G
Smad7
SMAD family member 7
involved_in
ISO IEA
(PMID:24887517) GO_REF:0000107
RGD Ensembl
PMID:24887517
GO_REF:0000107
NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
G
Tiam1
TIAM Rac1 associated GEF 1
involved_in
ISO
(PMID:20826792)
RGD
PMID:20826792
NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
G
Tgfb1
transforming growth factor, beta 1
NOT NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
G
Tgfb3
transforming growth factor, beta 3
NOT NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT NOT|involved_in
ISO
(MGI:3040576|PMID:15073157)
RGD
PMID:15073157
MGI:3040576
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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