×
Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Update Watcher
Remove Watcher
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Update Watcher
Remove Watcher
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
×
Save what matters to you
{{ loginError }}
Sign in with your RGD account
Email Address:
Password:
Create New Account
Recover Password
×
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be send to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
(beta)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Overgo Probe Designer
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
COVID-19
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
new
Genetic Models
Autism Models
PhenoMiner (Quantitative Phenotypes)
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
GERRC (Gene Editing Rat Resource Center)
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Poster Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
ONTOLOGY REPORT - ANNOTATIONS
{{ watchLinkText }}
Term:
inner cell mass cellular morphogenesis
go back to main search page
Accession:
GO:0001828
browse the term
Definition:
The morphogenesis of cells in the inner cell mass.
Comment:
See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, inner cell mass ; EMAP:14' and 'TS5, inner cell mass ; EMAP:24'.
show annotations for term's descendants Sort by:
symbol
object name
position
reference
evidence
↑ asc
↓ desc
Rat (3)
Mouse (3)
Human (3)
Chinchilla (3)
Bonobo (3)
Dog (3)
Squirrel (3)
Pig (3)
Green Monkey (3)
Naked Mole-rat (3)
All
Genes (3)
inner cell mass cellular morphogenesis
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Lats1
large tumor suppressor kinase 1
acts_upstream_of_or_within
ISO
MGI:1354386 (MGI:5502808|PMID:23824537)
RGD
PMID:23824537
MGI:5502808
NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
G
Lats2
large tumor suppressor kinase 2
acts_upstream_of_or_within
ISO
MGI:1333883 (MGI:5502808|PMID:23824537)
RGD
PMID:23824537
MGI:5502808
NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
MGI:3717121 (MGI:4946462|PMID:21146513)
RGD
PMID:21146513
MGI:4946462
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
biological_process
19746
developmental process
6931
anatomical structure morphogenesis
2938
embryonic morphogenesis
698
inner cell mass cellular morphogenesis
3
Path 2
Term
Annotations
biological_process
19746
developmental process
6931
anatomical structure development
6386
multicellular organism development
5165
embryo development
1359
embryo development ending in birth or egg hatching
882
chordate embryonic development
865
in utero embryonic development
562
blastocyst development
159
blastocyst formation
60
inner cell mass cell differentiation
8
inner cell mass cellular morphogenesis
3